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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   retinoblastoma
  

Disease ID 14
Disease retinoblastoma
Definition
A malignant tumor arising from the nuclear layer of the retina that is the most common primary tumor of the eye in children. The tumor tends to occur in early childhood or infancy and may be present at birth. The majority are sporadic, but the condition may be transmitted as an autosomal dominant trait. Histologic features include dense cellularity, small round polygonal cells, and areas of calcification and necrosis. An abnormal pupil reflex (leukokoria); NYSTAGMUS, PATHOLOGIC; STRABISMUS; and visual loss represent common clinical characteristics of this condition. (From DeVita et al., Cancer: Principles and Practice of Oncology, 5th ed, p2104)
Synonym
[m]retinoblastoma nos
[m]retinoblastoma nos (morphologic abnormality)
[m]retinoblastomas
[m]retinoblastomas (morphologic abnormality)
disorders retinoblastoma
eye cancer, retinoblastoma
glioblastoma, retinal
glioblastomas, retinal
glioma, retinal
gliomas, retinal
neuroblastoma of retina
neuroblastoma of the retina
neuroblastoma, retinal
neuroblastomas, retinal
rb
rb - retinoblastoma
rb1
retina, glioma
retinal glioblastoma
retinal glioblastomas
retinal glioma
retinal gliomas
retinal neuroblastoma
retinal neuroblastomas
retinoblastoma (disorder)
retinoblastoma (m-95103)
retinoblastoma (morphologic abnormality)
retinoblastoma - morphology
retinoblastoma [disease/finding]
retinoblastoma, malignant
retinoblastoma, nos
retinoblastomas
Orphanet
OMIM
DOID
UMLS
C0035335
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:30)
C0205898  |  pineoblastoma  |  3
C0035305  |  retinal detachment  |  3
C0024299  |  lymphoma  |  2
C0149507  |  orbital cellulitis  |  2
C0015397  |  ocular disease  |  2
C0007138  |  urothelial carcinoma  |  1
C0002871  |  anemia  |  1
C0162666  |  mitochondrial encephalomyopathy  |  1
C0153382  |  oropharyngeal cancer  |  1
C0020581  |  hyphema  |  1
C0029463  |  osteosarcoma  |  1
C0035309  |  retinopathy  |  1
C0031347  |  pharyngeal cancer  |  1
C0007129  |  merkel cell carcinoma  |  1
C0014236  |  endophthalmitis  |  1
C0206695  |  neuroendocrine carcinoma  |  1
C0086543  |  cataracts  |  1
C0154832  |  coats' disease  |  1
C0854915  |  unilateral retinoblastoma  |  1
C0206695  |  neuroendocrine carcinomas  |  1
C0041327  |  phthisis  |  1
C0032000  |  pituitary adenoma  |  1
C0040561  |  ocular toxoplasmosis  |  1
C0031269  |  peutz-jeghers syndrome  |  1
C0154916  |  iris neovascularization  |  1
C0006413  |  burkitt lymphoma  |  1
C0029132  |  optic nerve disease  |  1
C0751483  |  hereditary retinoblastoma  |  1
C0398623  |  thrombophilia  |  1
C0376358  |  prostate cancer  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:1)
5925  |  RB1  |  CLINVAR;CTD_human;GHR;UNIPROT
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:2)
1815  |  DRD4  |  CIPHER
5925  |  RB1  |  CIPHER;CTD_human
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:328)
55324  |  ABCF3  |  1.688  |  DISEASES
25  |  ABL1  |  2.537  |  DISEASES
32  |  ACACB  |  1.218  |  DISEASES
60  |  ACTB  |  1.636  |  DISEASES
8125  |  ANP32A  |  1.925  |  DISEASES
317  |  APAF1  |  2.214  |  DISEASES
367  |  AR  |  2.545  |  DISEASES
5926  |  ARID4A  |  3.34  |  DISEASES
11016  |  ATF7  |  1.609  |  DISEASES
9212  |  AURKB  |  2.148  |  DISEASES
11177  |  BAZ1A  |  1.021  |  DISEASES
10018  |  BCL2L11  |  2.157  |  DISEASES
54880  |  BCOR  |  1.595  |  DISEASES
627  |  BDNF  |  1.137  |  DISEASES
497258  |  BDNF-AS  |  1.029  |  DISEASES
55814  |  BDP1  |  3.834  |  DISEASES
631  |  BFSP1  |  1.264  |  DISEASES
128408  |  BHLHE23  |  1.358  |  DISEASES
648  |  BMI1  |  2.134  |  DISEASES
650  |  BMP2  |  1.204  |  DISEASES
672  |  BRCA1  |  2.344  |  DISEASES
675  |  BRCA2  |  2.245  |  DISEASES
6046  |  BRD2  |  1.031  |  DISEASES
138162  |  C9orf116  |  2.707  |  DISEASES
801  |  CALM1  |  1.596  |  DISEASES
840  |  CASP7  |  1.347  |  DISEASES
841  |  CASP8  |  2.318  |  DISEASES
842  |  CASP9  |  2.207  |  DISEASES
859  |  CAV3  |  1.017  |  DISEASES
11335  |  CBX3  |  2.25  |  DISEASES
892  |  CCNC  |  1.899  |  DISEASES
896  |  CCND3  |  5.179  |  DISEASES
899  |  CCNF  |  1.421  |  DISEASES
900  |  CCNG1  |  1.706  |  DISEASES
960  |  CD44  |  1.79  |  DISEASES
4267  |  CD99  |  1.24  |  DISEASES
995  |  CDC25C  |  2.412  |  DISEASES
996  |  CDC27  |  1.224  |  DISEASES
8318  |  CDC45  |  1.224  |  DISEASES
55038  |  CDCA4  |  1.591  |  DISEASES
1012  |  CDH13  |  1.098  |  DISEASES
983  |  CDK1  |  4.809  |  DISEASES
5129  |  CDK18  |  1.045  |  DISEASES
1018  |  CDK3  |  2.753  |  DISEASES
1020  |  CDK5  |  3.088  |  DISEASES
1025  |  CDK9  |  3.08  |  DISEASES
8814  |  CDKL1  |  1.105  |  DISEASES
1028  |  CDKN1C  |  2.939  |  DISEASES
1029  |  CDKN2A  |  6.466  |  DISEASES
55602  |  CDKN2AIP  |  1.247  |  DISEASES
1032  |  CDKN2D  |  3.474  |  DISEASES
1033  |  CDKN3  |  1.406  |  DISEASES
1050  |  CEBPA  |  2.561  |  DISEASES
1052  |  CEBPD  |  1.76  |  DISEASES
51286  |  CEND1  |  1.02  |  DISEASES
1063  |  CENPF  |  1.333  |  DISEASES
9857  |  CEP350  |  1.374  |  DISEASES
1108  |  CHD4  |  1.459  |  DISEASES
1111  |  CHEK1  |  3.09  |  DISEASES
11200  |  CHEK2  |  2.181  |  DISEASES
10519  |  CIB1  |  2.035  |  DISEASES
11113  |  CIT  |  1.357  |  DISEASES
10987  |  COPS5  |  1.005  |  DISEASES
1378  |  CR1  |  2.112  |  DISEASES
1385  |  CREB1  |  2.191  |  DISEASES
1394  |  CRHR1  |  1.221  |  DISEASES
1395  |  CRHR2  |  1.228  |  DISEASES
1447  |  CSN2  |  1.164  |  DISEASES
1499  |  CTNNB1  |  3.007  |  DISEASES
8454  |  CUL1  |  2.249  |  DISEASES
8453  |  CUL2  |  1.925  |  DISEASES
9820  |  CUL7  |  1.885  |  DISEASES
1523  |  CUX1  |  1.04  |  DISEASES
1649  |  DDIT3  |  1.06  |  DISEASES
7913  |  DEK  |  3.012  |  DISEASES
1606  |  DGKA  |  1.52  |  DISEASES
8525  |  DGKZ  |  2.685  |  DISEASES
1719  |  DHFR  |  3.596  |  DISEASES
56616  |  DIABLO  |  1.077  |  DISEASES
23405  |  DICER1  |  1.264  |  DISEASES
1786  |  DNMT1  |  2.923  |  DISEASES
1789  |  DNMT3B  |  1.232  |  DISEASES
1791  |  DNTT  |  2.324  |  DISEASES
1869  |  E2F1  |  5.184  |  DISEASES
1870  |  E2F2  |  4.89  |  DISEASES
1874  |  E2F4  |  5.754  |  DISEASES
1875  |  E2F5  |  4.706  |  DISEASES
1876  |  E2F6  |  3.451  |  DISEASES
144455  |  E2F7  |  2.934  |  DISEASES
23741  |  EID1  |  2.739  |  DISEASES
1978  |  EIF4EBP1  |  2.083  |  DISEASES
64100  |  ELSPBP1  |  2.062  |  DISEASES
57634  |  EP400  |  3.069  |  DISEASES
2098  |  ESD  |  4.052  |  DISEASES
2100  |  ESR2  |  1.875  |  DISEASES
2130  |  EWSR1  |  1.001  |  DISEASES
355  |  FAS  |  1.032  |  DISEASES
23014  |  FBXO21  |  1.577  |  DISEASES
2258  |  FGF13  |  1.395  |  DISEASES
2261  |  FGFR3  |  1.402  |  DISEASES
2272  |  FHIT  |  1.218  |  DISEASES
2280  |  FKBP1A  |  1.362  |  DISEASES
642489  |  FKBP1C  |  1.458  |  DISEASES
23048  |  FNBP1  |  1.618  |  DISEASES
2305  |  FOXM1  |  1.35  |  DISEASES
2308  |  FOXO1  |  1.694  |  DISEASES
2309  |  FOXO3  |  1.435  |  DISEASES
4303  |  FOXO4  |  1.062  |  DISEASES
2444  |  FRK  |  1.278  |  DISEASES
51343  |  FZR1  |  2.042  |  DISEASES
1647  |  GADD45A  |  2.317  |  DISEASES
2623  |  GATA1  |  1.036  |  DISEASES
54815  |  GATAD2A  |  1.41  |  DISEASES
2665  |  GDI2  |  1.403  |  DISEASES
2737  |  GLI3  |  1.393  |  DISEASES
29889  |  GNL2  |  1.121  |  DISEASES
9402  |  GRAP2  |  1.046  |  DISEASES
392862  |  GRID2IP  |  1.11  |  DISEASES
2932  |  GSK3B  |  2.503  |  DISEASES
2959  |  GTF2B  |  3.147  |  DISEASES
2962  |  GTF2F1  |  1.283  |  DISEASES
2969  |  GTF2I  |  1.519  |  DISEASES
2975  |  GTF3C1  |  1.116  |  DISEASES
3005  |  H1F0  |  4.62  |  DISEASES
3014  |  H2AFX  |  2.417  |  DISEASES
3065  |  HDAC1  |  3.937  |  DISEASES
3066  |  HDAC2  |  2.52  |  DISEASES
55869  |  HDAC8  |  1.918  |  DISEASES
3091  |  HIF1A  |  1.76  |  DISEASES
8359  |  HIST1H4A  |  2.772  |  DISEASES
8366  |  HIST1H4B  |  2.772  |  DISEASES
8364  |  HIST1H4C  |  2.772  |  DISEASES
8360  |  HIST1H4D  |  2.771  |  DISEASES
8367  |  HIST1H4E  |  2.772  |  DISEASES
8361  |  HIST1H4F  |  2.772  |  DISEASES
8294  |  HIST1H4I  |  2.772  |  DISEASES
8363  |  HIST1H4J  |  2.772  |  DISEASES
8362  |  HIST1H4K  |  2.772  |  DISEASES
8368  |  HIST1H4L  |  2.772  |  DISEASES
333932  |  HIST2H3A  |  1.404  |  DISEASES
8370  |  HIST2H4A  |  2.772  |  DISEASES
554313  |  HIST2H4B  |  2.772  |  DISEASES
121504  |  HIST4H4  |  2.772  |  DISEASES
3122  |  HLA-DRA  |  2.714  |  DISEASES
3135  |  HLA-G  |  1.072  |  DISEASES
8091  |  HMGA2  |  1.499  |  DISEASES
127540  |  HMGB4  |  1.048  |  DISEASES
3320  |  HSP90AA1  |  2.189  |  DISEASES
3397  |  ID1  |  2.322  |  DISEASES
3399  |  ID3  |  1.298  |  DISEASES
3451  |  IFNA17  |  1.013  |  DISEASES
3441  |  IFNA4  |  1.098  |  DISEASES
3481  |  IGF2  |  1.708  |  DISEASES
3482  |  IGF2R  |  1.291  |  DISEASES
3486  |  IGFBP3  |  1.007  |  DISEASES
11009  |  IL24  |  1.146  |  DISEASES
3684  |  ITGAM  |  1.197  |  DISEASES
3713  |  IVL  |  1.247  |  DISEASES
3714  |  JAG2  |  1.285  |  DISEASES
3725  |  JUN  |  3.898  |  DISEASES
10524  |  KAT5  |  1.003  |  DISEASES
11104  |  KATNA1  |  1.304  |  DISEASES
5927  |  KDM5A  |  3.536  |  DISEASES
10765  |  KDM5B  |  1.894  |  DISEASES
7403  |  KDM6A  |  1.638  |  DISEASES
9928  |  KIF14  |  3.273  |  DISEASES
23633  |  KPNA6  |  1.035  |  DISEASES
402569  |  KPNA7  |  2.153  |  DISEASES
10660  |  LBX1  |  1.207  |  DISEASES
3939  |  LDHA  |  1.17  |  DISEASES
10186  |  LHFP  |  1.066  |  DISEASES
91750  |  LIN52  |  2.887  |  DISEASES
132660  |  LIN54  |  2.8  |  DISEASES
286826  |  LIN9  |  3.249  |  DISEASES
100862704  |  LINC00441  |  1.999  |  DISEASES
9860  |  LRIG2  |  1.378  |  DISEASES
4110  |  MAGEA11  |  1.45  |  DISEASES
4133  |  MAP2  |  1.309  |  DISEASES
5609  |  MAP2K7  |  3.375  |  DISEASES
5599  |  MAPK8  |  2.455  |  DISEASES
5601  |  MAPK9  |  1.501  |  DISEASES
23383  |  MAU2  |  1.013  |  DISEASES
4149  |  MAX  |  1.109  |  DISEASES
4170  |  MCL1  |  2.397  |  DISEASES
4193  |  MDM2  |  4.967  |  DISEASES
4194  |  MDM4  |  3.705  |  DISEASES
4221  |  MEN1  |  1.891  |  DISEASES
407975  |  MIR17HG  |  1.587  |  DISEASES
284424  |  MIR7-3HG  |  2.244  |  DISEASES
57591  |  MKL1  |  1.315  |  DISEASES
4318  |  MMP9  |  1.657  |  DISEASES
10933  |  MORF4L1  |  2.654  |  DISEASES
9643  |  MORF4L2  |  1.047  |  DISEASES
2475  |  MTOR  |  2.727  |  DISEASES
4602  |  MYB  |  2.099  |  DISEASES
4603  |  MYBL1  |  1.162  |  DISEASES
4609  |  MYC  |  5.102  |  DISEASES
23310  |  NCAPD3  |  2.447  |  DISEASES
4692  |  NDN  |  1.942  |  DISEASES
10763  |  NES  |  1.223  |  DISEASES
4763  |  NF1  |  1.697  |  DISEASES
4771  |  NF2  |  1.01  |  DISEASES
4799  |  NFX1  |  1.033  |  DISEASES
4803  |  NGF  |  2.5  |  DISEASES
4831  |  NME2  |  2.139  |  DISEASES
4893  |  NRAS  |  2.212  |  DISEASES
8204  |  NRIP1  |  1.176  |  DISEASES
4901  |  NRL  |  1.758  |  DISEASES
28989  |  NTMT1  |  1.502  |  DISEASES
4914  |  NTRK1  |  1.4  |  DISEASES
26747  |  NUFIP1  |  1.927  |  DISEASES
10896  |  OCLM  |  1.125  |  DISEASES
4998  |  ORC1  |  1.374  |  DISEASES
5015  |  OTX2  |  1.314  |  DISEASES
10606  |  PAICS  |  1.778  |  DISEASES
142  |  PARP1  |  3.284  |  DISEASES
5080  |  PAX6  |  2.606  |  DISEASES
5100  |  PCDH8  |  1.44  |  DISEASES
56146  |  PCDHA2  |  2.004  |  DISEASES
7703  |  PCGF2  |  1.272  |  DISEASES
5111  |  PCNA  |  2.004  |  DISEASES
5148  |  PDE6G  |  1.681  |  DISEASES
5241  |  PGR  |  1.704  |  DISEASES
23654  |  PLXNB2  |  1.108  |  DISEASES
5499  |  PPP1CA  |  3.467  |  DISEASES
5501  |  PPP1CC  |  2.509  |  DISEASES
5514  |  PPP1R10  |  3.224  |  DISEASES
151242  |  PPP1R1C  |  1.42  |  DISEASES
9858  |  PPP1R26  |  1.859  |  DISEASES
5515  |  PPP2CA  |  1.163  |  DISEASES
5537  |  PPP6C  |  2.301  |  DISEASES
639  |  PRDM1  |  2.381  |  DISEASES
8842  |  PROM1  |  1.247  |  DISEASES
5728  |  PTEN  |  3.128  |  DISEASES
5743  |  PTGS2  |  1.662  |  DISEASES
5784  |  PTPN14  |  1.514  |  DISEASES
9232  |  PTTG1  |  1.109  |  DISEASES
5813  |  PURA  |  1.952  |  DISEASES
5814  |  PURB  |  1.089  |  DISEASES
5915  |  RARB  |  1.657  |  DISEASES
11186  |  RASSF1  |  1.448  |  DISEASES
9770  |  RASSF2  |  1.084  |  DISEASES
83593  |  RASSF5  |  1.012  |  DISEASES
5928  |  RBBP4  |  4.641  |  DISEASES
5931  |  RBBP7  |  4.393  |  DISEASES
5932  |  RBBP8  |  2.241  |  DISEASES
10741  |  RBBP9  |  3.18  |  DISEASES
5933  |  RBL1  |  7.369  |  DISEASES
3516  |  RBPJ  |  1.481  |  DISEASES
57109  |  REXO4  |  1.086  |  DISEASES
28984  |  RGCC  |  4.474  |  DISEASES
6005  |  RHAG  |  1.706  |  DISEASES
387  |  RHOA  |  2.079  |  DISEASES
6025  |  RN5S1@  |  1.818  |  DISEASES
63891  |  RNF123  |  1.081  |  DISEASES
285533  |  RNF175  |  1.859  |  DISEASES
6053  |  RNR2  |  1.247  |  DISEASES
6118  |  RPA2  |  1.215  |  DISEASES
6222  |  RPS18  |  1.271  |  DISEASES
6194  |  RPS6  |  1.53  |  DISEASES
6195  |  RPS6KA1  |  1.194  |  DISEASES
860  |  RUNX2  |  1.613  |  DISEASES
6256  |  RXRA  |  1.487  |  DISEASES
6295  |  SAG  |  2.248  |  DISEASES
29950  |  SERTAD1  |  1.5  |  DISEASES
9792  |  SERTAD2  |  2.036  |  DISEASES
6464  |  SHC1  |  1.411  |  DISEASES
23309  |  SIN3B  |  1.746  |  DISEASES
7884  |  SLBP  |  1.765  |  DISEASES
6560  |  SLC12A4  |  1.622  |  DISEASES
1811  |  SLC26A3  |  1.363  |  DISEASES
22950  |  SLC4A1AP  |  2.011  |  DISEASES
4088  |  SMAD3  |  1.492  |  DISEASES
4089  |  SMAD4  |  1.148  |  DISEASES
6594  |  SMARCA1  |  1.625  |  DISEASES
6597  |  SMARCA4  |  3.485  |  DISEASES
27127  |  SMC1B  |  1.131  |  DISEASES
150572  |  SMYD1  |  1.928  |  DISEASES
56950  |  SMYD2  |  2.21  |  DISEASES
64754  |  SMYD3  |  1.338  |  DISEASES
10322  |  SMYD5  |  1.733  |  DISEASES
6619  |  SNAPC3  |  1.756  |  DISEASES
26770  |  SNORD79  |  1.083  |  DISEASES
6657  |  SOX2  |  2.045  |  DISEASES
6667  |  SP1  |  2.423  |  DISEASES
10638  |  SPHAR  |  2.912  |  DISEASES
6714  |  SRC  |  2.873  |  DISEASES
6428  |  SRSF3  |  1.01  |  DISEASES
6736  |  SRY  |  1.241  |  DISEASES
23648  |  SSBP3  |  1.09  |  DISEASES
6772  |  STAT1  |  1.625  |  DISEASES
81551  |  STMN4  |  1.399  |  DISEASES
8803  |  SUCLA2  |  1.086  |  DISEASES
6839  |  SUV39H1  |  2.812  |  DISEASES
6850  |  SYK  |  2.066  |  DISEASES
79718  |  TBL1XR1  |  1.295  |  DISEASES
84260  |  TCHP  |  4.223  |  DISEASES
7005  |  TEAD3  |  1.192  |  DISEASES
7027  |  TFDP1  |  4.229  |  DISEASES
7029  |  TFDP2  |  1.743  |  DISEASES
51270  |  TFDP3  |  3.118  |  DISEASES
7042  |  TGFB2  |  1.024  |  DISEASES
7068  |  THRB  |  1.517  |  DISEASES
79639  |  TMEM53  |  2.281  |  DISEASES
7124  |  TNF  |  1.488  |  DISEASES
7150  |  TOP1  |  1.327  |  DISEASES
7153  |  TOP2A  |  1.264  |  DISEASES
7155  |  TOP2B  |  1.526  |  DISEASES
7158  |  TP53BP1  |  2.663  |  DISEASES
112858  |  TP53RK  |  1.039  |  DISEASES
7161  |  TP73  |  1.023  |  DISEASES
8805  |  TRIM24  |  1.6  |  DISEASES
8295  |  TRRAP  |  2.916  |  DISEASES
10628  |  TXNIP  |  1.129  |  DISEASES
7337  |  UBE3A  |  1.802  |  DISEASES
23352  |  UBR4  |  2.681  |  DISEASES
7421  |  VDR  |  1.486  |  DISEASES
7422  |  VEGFA  |  2.704  |  DISEASES
23339  |  VPS39  |  2.403  |  DISEASES
11193  |  WBP4  |  1.552  |  DISEASES
7465  |  WEE1  |  1.647  |  DISEASES
7490  |  WT1  |  2.501  |  DISEASES
51741  |  WWOX  |  1.807  |  DISEASES
331  |  XIAP  |  2.073  |  DISEASES
7514  |  XPO1  |  2.169  |  DISEASES
6935  |  ZEB1  |  1.49  |  DISEASES
162239  |  ZFP1  |  2.088  |  DISEASES
161882  |  ZFPM1  |  1.141  |  DISEASES
Locus(Waiting for update.)
Disease ID 14
Disease retinoblastoma
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:1)
HP:0009919  |  Retinoblastoma
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:25)
HP:0002664  |  Neoplasia  |  15
HP:0000541  |  Detached retina  |  3
HP:0030408  |  Pineoblastoma  |  3
HP:0000555  |  Leukocoria  |  2
HP:0002665  |  Lymphoma  |  2
HP:0012125  |  Prostate cancer  |  1
HP:0030080  |  Burkitt lymphoma  |  1
HP:0100724  |  Hypercoagulability  |  1
HP:0012683  |  Pineal cyst  |  1
HP:0000488  |  Noninflammatory retina disease  |  1
HP:0002669  |  Osteosarcoma  |  1
HP:0002893  |  Pituitary adenoma  |  1
HP:0000518  |  Cataract  |  1
HP:0000365  |  Hearing impairment  |  1
HP:0001510  |  Growth deficiency  |  1
HP:0001903  |  Anemia  |  1
HP:0011886  |  Hyphema  |  1
HP:0011497  |  New blood vessel formation in iris  |  1
HP:0012230  |  Rhegmatogenous retinal detachment  |  1
HP:0004322  |  Stature below 3rd percentile  |  1
HP:0001249  |  Mental retardation  |  1
HP:0030731  |  Carcinoma  |  1
HP:0000667  |  Phthisis bulbi  |  1
HP:0001289  |  Confusion  |  1
HP:0002597  |  Abnormality of blood vessels  |  1
Disease ID 14
Disease retinoblastoma
Manually Symptom
UMLS  | Name(Total Manually Symptoms:32)
C2697383  |  osteosarcoma
C2063120  |  pineoblastoma
C1963266  |  uveitis
C1963229  |  retinal detachment
C1962986  |  glaucoma
C1704327  |  bone sarcomas
C1658953  |  tumor vasculature
C1608408  |  malignant transformation
C1402829  |  leukoencephalitis
C1261473  |  sarcoma
C0920196  |  carcinoma of the eyelid
C0686377  |  central nervous system metastases
C0677930  |  primary neoplasm
C0496836  |  ocular cancer
C0426768  |  o sign
C0422833  |  ent symptoms
C0280449  |  secondary acute myelogenous leukemia
C0265451  |  13q deletion syndrome
C0220654  |  malignant meningitis
C0220650  |  brain metastasis
C0162678  |  neurofibromatosis
C0154916  |  rubeosis iridis
C0153690  |  bone metastases
C0152458  |  leukocoria
C0149893  |  secondary glaucoma
C0086543  |  cataracts
C0036454  |  visual field defects
C0027627  |  secondary malignancies
C0025362  |  mental retardation
C0025289  |  meningitis
C0015414  |  ocular tumor
C0008626  |  chromosomal abnormality
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:6)
C0035305  |  retinal detachment  |  3
C0205898  |  pineoblastoma  |  3
C0152458  |  leukocoria  |  2
C0029463  |  osteosarcoma  |  1
C0015414  |  ocular tumor  |  1
C0086543  |  cataracts  |  1
Manually Genotype(Total Manually Genotypes:1)
Gene Mutation DOI Article Title
RB1-doi:10.1038/gim.2015.51Clinical performance of the CytoScan Dx Assay in diagnosing developmental delay/intellectual disability
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:106)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs1051266203100064524MTHFRumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0029099162010SLC19A12145537880TC
rs1051266203100066573SLC19A1umls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0005428842010SLC19A12145537880TC
rs1051266203100067298TYMSumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0026384742010SLC19A12145537880TC
rs121912431126576726647SOD1umls:C0035335BeFreePharmacological treatment of SOD1(G37R) mice with minocycline, a compound that attenuates microgliosis and slows down disease, lessened the dysregulation of Cdk5/Cdk4 and the phosphorylation of Rb.0.0002714422003SOD12131663829GA
rs121913296NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348345108GT
rs121913300NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348367512CG,T
rs121913301NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348368549CT
rs121913302200593805925RB1umls:C0035335BeFreeA c.1363C>T (p.R455X) nonsense mutation of RB1 gene in a southern Chinese retinoblastoma pedigree.0.4999925332010RB11348379624CT
rs121913302NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348379624CT
rs121913303NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348381402CT
rs121913304NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348381414CT
rs121913305NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348453032CT
rs137853292NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348452997CT
rs137853293NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465238CT
rs137853294NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348459708CT
rs137853296NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463758TC
rs137853297166312555925RB1umls:C0035335BeFreeTo describe the documented growth, clinical course, and histopathology of retinoblastomas in an untreated and otherwise normal right eye of a 27-year-old white male with a g.153211T>A (p.Tyr606X) mutation in the retinoblastoma 1 gene, whose left eye was enucleated at age 2 years for 2 retinoblastomas.0.4999925332006RB11348456207TA
rs137853297NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456207TA
rs1805087203100064524MTHFRumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0029099162010MTR1236885200AG
rs1805087203100067298TYMSumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0026384742010MTR1236885200AG
rs1805087203100066573SLC19A1umls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0005428842010MTR1236885200AG
rs1805087203100064548MTRumls:C0035335BeFreeMTR polymorphic variant A2756G and retinoblastoma risk in Brazilian children.0.0026384742010MTR1236885200AG
rs3092891NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348379594CT
rs368087026203100066573SLC19A1umls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0005428842010SLC19A12145530890GA
rs368087026203100067298TYMSumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0026384742010SLC19A12145530890GA
rs368087026203100064524MTHFRumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0029099162010SLC19A12145530890GA
rs386514057203100067298TYMSumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0026384742010NANANANANA
rs386514057203100066573SLC19A1umls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0005428842010NANANANANA
rs386514057203100064524MTHFRumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0029099162010NANANANANA
rs387906520NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348303724GT
rs387906521NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348303715GA
rs397507444203100067298TYMSumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0026384742010MTHFR111794407TG
rs397507444203100066573SLC19A1umls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0005428842010MTHFR111794407TG
rs397507444203100064524MTHFRumls:C0035335BeFreeA case-control study of 72 retinoblastoma cases and 98 cancer-free children controls was performed to investigate whether the polymorphisms of the methylenetetrahydrofolate reductase (MTHFR C677T and A1298C), methionine synthase (MTR A2756G), carrier of reduced folate 1 (RFC-1 A80G) and thymidylate synthase (TYMS 2R > 3R) altered the risk for retinoblastoma.0.0029099162010MTHFR111794407TG
rs398123331NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380062CT
rs398123332NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348381333-T
rs398123333NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348459794GAATGAGTATGAACAC
rs55819519226744537157TP53umls:C0035335BeFreeUsing immunohistochemistry, we investigated expression of R132H IDH1, and p53 and retinoblastoma pathways.0.0605514012012TP53177673751CT
rs587776779NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348473391G-
rs587776780NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456351TC
rs587776781NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465030G-
rs587776782NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348367604GA,T
rs587776783NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348373493GA
rs587776784NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348453057AATCTGCTTG-
rs587776785NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456338TTTATAAAA-
rs587776786NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348464997GA
rs587776787NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463835GA
rs587776788NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380182ACA-
rs587776789NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348349024GT
rs587776790NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348303977-GCTGCCGCCGCGGAACCCCCGGC
rs587776791NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348471962AG
rs587778823NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348303984GCC-
rs587778824NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348307370-TA
rs587778825NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348342639GT-
rs587778826NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348347832GT
rs587778827NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348362891A-
rs587778828NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348364916-A
rs587778829NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348368537CA-
rs587778830NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348373424-C
rs587778831NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348376917GA
rs587778832NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380199TT-
rs587778833NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456298CT
rs587778834NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348459700CA,T
rs587778835NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463821CT
rs587778836NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465016-TTGA
rs587778837NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465332G-
rs587778838NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348473359GA
rs587778839NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348476845TC
rs587778840NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348307359A-
rs587778841NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348345137TGCT-
rs587778842NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348362859CT
rs587778843NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348364969GT
rs587778844NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348367578A-
rs587778845NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348373443TA
rs587778846NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348377035GA,T
rs587778847NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348379607GT
rs587778848NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380215TC
rs587778849NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463788AT
rs587778850NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348473391GA
rs587778851NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348476705-C
rs587778853NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348342638TG-
rs587778854NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348345162-T
rs587778855NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348367575AT
rs587778857NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348381444GA
rs587778858NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348453035GT
rs587778859NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348459828GA
rs587778860NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463730GC
rs587778861NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465033TA,C
rs587778862NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348307361AG-
rs587778863NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348381436GA
rs587778864NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348453020CT
rs587778865NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456314TA
rs587778866NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456316AG
rs587778867NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348459686AT
rs587778868NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348463833GT
rs587778869NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348304015CT
rs587778870NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348345145CG,T
rs587778871NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456354GA
rs587781256NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380096ACTTTTAGTAAAAAATTTTTT-
rs587781257NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348456296T-
rs727504120NA5925RB1umls:C0035335CLINVARNA0.499992533NARB1;LINC004411348303966GGAACCCCCGGCACCGCCGCCGCCGC-
rs727504121NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348373468A-
rs794727199NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348452992GA
rs794727372NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348465249CA
rs794727481NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348342631GA
rs797044649NA5925RB1umls:C0035335CLINVARNA0.499992533NARB11348380074-ATTATCCATTC
GWASdb Annotation(Total Genotypes:2)
Chr Pos SNP_Id RefGene EnsemblGene ENCODE_Factor ENCODE_TFBS Chromosome_interaction GTEx_eQTL SNP_TFBS_affinity_GWAS3D SNP_miRNA_target_affinity_PolymiRTS SNP_splicing_effect_Skippy SNP_splicing_effect_MutPred_Splice SNP_ns_protein_effect_dbNSFP SNP_syn_effect_Silva SNP_phosphorylation_effect_PhosSNP PhastCons_score PhyloP_score GERP++_RS Segway_state Ancestral_allele ESP_AF ESP_AFR ESP_AFR ESP_EUR TG_ASN TG_AMR TG_AFR TG_EUR Type Consequence bStatistic EncH3K27Ac EncH3K4Me1 EncH3K4Me3 EncNucleo OMIM Clinvar
1348955201rs2804085NM_000321,RB1ENST00000267163,ENSG00000139687NANAchr13,48950001,48960000,chr19,30210001,30220000,7,Hi-CNAOct-1,49.9386AhR,1.3138Oct-1,18.1154OCT-x,39.5563MEF-2,1.8381NANANANANANA0.1682.8184.62F1ANANANA0.9301.0000.9500.7700.990TranscriptINTRONIC3432.003.24
1349035693rs4151601NM_000321,RB1ENST00000267163,ENSG00000139687NANAchr13,49030001,49040000,chr12,60850001,60860000,25,Hi-Cchr13,49030001,49040000,chr7,149500001,149510000,26,Hi-Cchr13,49030001,49040000,chr8,40810001,40820000,29,Hi-Cchr13,49030001,49040000,chr13,30220001,30230000,51,Hi-Cchr13,49030001,49040000,chr13,33060001,33070000,54,Hi-Cchr13,49030001,49040000,chr7,7080001,7090000,15,Hi-Cchr13,49030001,49040000,chr16,7100001,7110000,18,Hi-Cchr13,49030001,49040000,chr7,23380001,23390000,6,Hi-Cchr13,49030001,49040000,chr5,11140001,11150000,8,Hi-Cchr13,49030001,49040000,chr1,231410001,231420000,8,Hi-Cchr13,49030001,49040000,chr3,37220001,37230000,9,Hi-Cchr13,49030001,49040000,chr1,233880001,233890000,10,Hi-Cchr13,49030001,49040000,chr8,95980001,95990000,10,Hi-Cchr13,49030001,49040000,chr16,1130001,1140000,25,Hi-CNALM12,2.0316LM71,10.4015LM100,1.3897LM217,1.8766LM220,1.8826NANANANANANA0.0000.0390.181F0G
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:1)
HP ID HP Name MP ID MP Name Annotation
HP:0009919RetinoblastomaMP:0013886increased CD4-negative, CD25-positive NK T cell numberincrease in the number of CD4-negative NK T cells expressing the activation marker CD25
Disease ID 14
Disease retinoblastoma
Case(Waiting for update.)