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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   poikiloderma with neutropenia
  

Disease ID 1577
Disease poikiloderma with neutropenia
Synonym
c16orf57
chromosome 16 open reading frame 57
flj13154
hvsl motif containing 1
hvsl1
mpn1
mutated in poikiloderma with neutropenia protein 1
u six biogenesis 1
u6 snrna biogenesis phosphodiesterase 1
usb1
usb1 gene
Orphanet
OMIM
DOID
UMLS
C1824414
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:1)
C0027947  |  neutropenia  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:1)
79650  |  USB1  |  CLINVAR;CTD_human;OMIM;ORPHANET
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:2)
100  |  ADA  |  2.29  |  DISEASES
3981  |  LIG4  |  3.321  |  DISEASES
Locus
Symbol | Locus(Total Locus:1)
USB1  |  16q21
Disease ID 1577
Disease poikiloderma with neutropenia
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:2)
HP:0001029  |  Poikiloderma  |  5
HP:0001875  |  Neutropenia  |  1
Disease ID 1577
Disease poikiloderma with neutropenia
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:4)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs137853970NA79650USB1umls:C1858723CLINVARNA0.363257302NAUSB11658017332AC
rs137853971NA79650USB1umls:C1858723CLINVARNA0.363257302NAUSB11658014325AG
rs137853972NA79650USB1umls:C1858723CLINVARNA0.363257302NAUSB11658019045AGGAACTACAGG-
rs786205051NA79650USB1umls:C1858723CLINVARNA0.363257302NAZNF319;USB11658002559C-
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1577
Disease poikiloderma with neutropenia
Case(Waiting for update.)