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	pneumocystosis

Disease ID	720
Disease	pneumocystosis
Definition	pulmonary disease in humans occurring in immunodeficient or malnourished patients or infants, characterized by dyspnea, tachypnea, and hypoxemia; Pneumocystis pneumonia is a frequent opportunistic infection in AIDS; also found in other mammals where it is caused by related species of Pneumocystis.
Synonym	interstitial plasma cell pneumonia pcp - pneumocystis carinii pneumonia pcp - pneumocystis pneumonia pjp pneumocystis carinii pneumonia pneumocystis carinii pneumonia (disorder) pneumocystis carinii pneumonia (pcp) pneumocystis jiroveci pneumonia pneumocystis jirovecii pneumonia pneumocystis pneumonia pneumocystis pneumonias pneumocystoses pneumocystosis (disorder) pneumocystosis jiroveci pneumonia pneumocystosis jiroveci pneumonia (disorder) pneumocystosis jirovecii pneumonia pneumocystosis jirovecii pneumonia (disorder) pneumocystosis pneumonia pneumocytosis pneumonia due to pneumocystis carinii pneumonia, interstitial plasma cell pneumonia, pneumocystis pneumonia, pneumocystis [disease/finding] pneumonia, pneumocystis carinii pneumonias, pneumocystis pneumonias, pneumocystis carinii pulmonary pneumocystosis pulmonary pneumocystosis (disorder)
Orphanet	ORPHANET:723
DOID	DOID:11339
ICD10	ICD10CM:B59
UMLS	C1535939
MeSH	D011020
SNOMED-CT	SNOMEDCT_US_2016_09_01:415125002;SNOMEDCT_US_2016_09_01:88860002
Comorbidity	UMLS \| Disease \| Sentences' Count(Total Sentences:51) C0032305 \| pneumocystis carinii pneumonia \| 10 C0003873 \| rheumatoid arthritis \| 9 C0032305 \| pneumocystis \| 9 C1145670 \| respiratory failure \| 8 C0003864 \| arthritis \| 7 C0024299 \| lymphoma \| 6 C0024141 \| systemic lupus erythematosus \| 3 C0019829 \| hodgkin lymphoma \| 3 C0001175 \| acquired immunodeficiency syndrome \| 3 C0021390 \| inflammatory bowel disease \| 3 C0001175 \| acquired immunodeficiency syndrome (aids) \| 2 C0409974 \| lupus erythematosus \| 2 C0024312 \| lymphopenia \| 2 C0010346 \| crohn's disease \| 2 C0042769 \| virus infection \| 2 C0079744 \| diffuse large b-cell lymphoma \| 2 C0041296 \| tuberculosis \| 2 C0079731 \| b-cell lymphoma \| 2 C0019829 \| hodgkin's lymphoma \| 2 C0001175 \| acquired immune deficiency syndrome \| 2 C0001175 \| acquired immune deficiency \| 2 C0039483 \| giant cell arteritis \| 2 C0024305 \| non-hodgkin's lymphoma \| 2 C0021831 \| bowel disease \| 2 C0024305 \| non-hodgkin lymphoma \| 2 C0021053 \| immune disease \| 2 C0032285 \| pneumonia \| 2 C0017920 \| glucose-6-phosphate dehydrogenase deficiency \| 1 C0009319 \| colitis \| 1 C0009782 \| connective tissue disease \| 1 C0079731 \| b-cell non-hodgkin lymphoma \| 1 C0024314 \| lymphoproliferative disorders \| 1 C0018203 \| chronic granulomatous disease \| 1 C0024314 \| lymphoproliferative disorder \| 1 C0024115 \| lung disease \| 1 C0032326 \| pneumothorax \| 1 C0021400 \| influenza \| 1 C0041327 \| pulmonary tuberculosis \| 1 C0206062 \| interstitial lung disease \| 1 C0022661 \| end-stage renal disease \| 1 C0020538 \| hypertension \| 1 C0376545 \| hematological malignancies \| 1 C0009782 \| connective tissue diseases \| 1 C0042373 \| vascular disease \| 1 C0206186 \| hairy leukoplakia \| 1 C0007222 \| cardiovascular disease \| 1 C0242379 \| lung cancer \| 1 C0009324 \| ulcerative colitis \| 1 C0017658 \| glomerulonephritis \| 1 C0023493 \| adult t-cell lymphoma \| 1 C0022658 \| renal disease \| 1
Curated Gene	(Waiting for update.)
Inferring Gene	(Waiting for update.)
Text Mined Gene	Entrez_id \| Symbol \| Score \| Resource(Total Genes:80) 26027 \| ACOT11 \| 2.014 \| DISEASES 55 \| ACPP \| 1.137 \| DISEASES 257 \| ALX3 \| 1.075 \| DISEASES 60489 \| APOBEC3G \| 1.261 \| DISEASES 567 \| B2M \| 2.327 \| DISEASES 801 \| CALM1 \| 1.656 \| DISEASES 23066 \| CAND2 \| 1.477 \| DISEASES 84433 \| CARD11 \| 2.1 \| DISEASES 64170 \| CARD9 \| 2.283 \| DISEASES 388372 \| CCL4L1 \| 1.183 \| DISEASES 9560 \| CCL4L2 \| 1.038 \| DISEASES 1232 \| CCR3 \| 1.355 \| DISEASES 1237 \| CCR8 \| 1.233 \| DISEASES 9034 \| CCRL2 \| 2.263 \| DISEASES 930 \| CD19 \| 2.082 \| DISEASES 958 \| CD40 \| 1.527 \| DISEASES 959 \| CD40LG \| 3.837 \| DISEASES 1043 \| CD52 \| 1.912 \| DISEASES 1201 \| CLN3 \| 1.293 \| DISEASES 1368 \| CPM \| 1.925 \| DISEASES 1378 \| CR1 \| 1.337 \| DISEASES 1524 \| CX3CR1 \| 1.286 \| DISEASES 2919 \| CXCL1 \| 1.118 \| DISEASES 85443 \| DCLK3 \| 1.87 \| DISEASES 1638 \| DCT \| 1.36 \| DISEASES 1719 \| DHFR \| 3.91 \| DISEASES 10938 \| EHD1 \| 1.057 \| DISEASES 1993 \| ELAVL2 \| 1.38 \| DISEASES 3266 \| ERAS \| 2.681 \| DISEASES 2314 \| FLII \| 1.234 \| DISEASES 2318 \| FLNC \| 3.597 \| DISEASES 2689 \| GH2 \| 1.431 \| DISEASES 200504 \| GKN2 \| 1.02 \| DISEASES 160897 \| GPR180 \| 1.587 \| DISEASES 2938 \| GSTA1 \| 1.03 \| DISEASES 2993 \| GYPA \| 3.145 \| DISEASES 3239 \| HOXD13 \| 1.053 \| DISEASES 3586 \| IL10 \| 2.102 \| DISEASES 3628 \| INPP1 \| 2.754 \| DISEASES 3633 \| INPP5B \| 2.102 \| DISEASES 253430 \| IPMK \| 2.22 \| DISEASES 51477 \| ISYNA1 \| 2.43 \| DISEASES 3684 \| ITGAM \| 1.273 \| DISEASES 3712 \| IVD \| 2.074 \| DISEASES 9682 \| KDM4A \| 1.03 \| DISEASES 3803 \| KIR2DL2 \| 1.137 \| DISEASES 9516 \| LITAF \| 1.51 \| DISEASES 3996 \| LLGL1 \| 1.099 \| DISEASES 987 \| LRBA \| 1.253 \| DISEASES 7975 \| MAFK \| 1.919 \| DISEASES 4519 \| MT-CYB \| 3.951 \| DISEASES 4535 \| MT-ND1 \| 1.143 \| DISEASES 4582 \| MUC1 \| 3.348 \| DISEASES 4668 \| NAGA \| 1.506 \| DISEASES 246734 \| NPCDR1 \| 2.432 \| DISEASES 8131 \| NPRL3 \| 1.658 \| DISEASES 2649 \| NR6A1 \| 2.428 \| DISEASES 4521 \| NUDT1 \| 1.169 \| DISEASES 93377 \| OPALIN \| 3.813 \| DISEASES 9124 \| PDLIM1 \| 1.009 \| DISEASES 5238 \| PGM3 \| 1.617 \| DISEASES 5570 \| PKIB \| 2.748 \| DISEASES 139728 \| PNCK \| 1.247 \| DISEASES 10622 \| POLR3G \| 2.751 \| DISEASES 29968 \| PSAT1 \| 1.346 \| DISEASES 114971 \| PTPMT1 \| 2.55 \| DISEASES 91543 \| RSAD2 \| 1.783 \| DISEASES 6441 \| SFTPD \| 3.66 \| DISEASES 113235 \| SLC46A1 \| 2.54 \| DISEASES 6865 \| TACR2 \| 1.338 \| DISEASES 55773 \| TBC1D23 \| 3.404 \| DISEASES 117145 \| THEM4 \| 1.373 \| DISEASES 7124 \| TNF \| 3.298 \| DISEASES 7133 \| TNFRSF1B \| 2.595 \| DISEASES 80351 \| TNKS2 \| 1.705 \| DISEASES 7257 \| TSNAX \| 2.249 \| DISEASES 6675 \| UAP1 \| 2.27 \| DISEASES 9094 \| UNC119 \| 2.534 \| DISEASES 6375 \| XCL1 \| 1.143 \| DISEASES 84671 \| ZNF347 \| 2.579 \| DISEASES
Locus	(Waiting for update.)

Disease ID	720
Disease	pneumocystosis
Integrated Phenotype	(Waiting for update.)
Text Mined Phenotype	HPO \| Name \| Sentences' Count(Total Phenotypes:25) HP:0002878 \| Respiratory failure \| 9 HP:0002721 \| Immunodeficiency \| 9 HP:0001370 \| Rheumatoid arthritis \| 9 HP:0001369 \| Arthritis \| 7 HP:0002665 \| Lymphoma \| 6 HP:0012189 \| Hodgkin disease \| 5 HP:0002725 \| Systemic lupus erythematosus \| 3 HP:0100806 \| Sepsis \| 2 HP:0012191 \| B-cell lymphoma \| 2 HP:0012539 \| Non-Hodgkin lymphoma \| 2 HP:0002960 \| Autoimmune condition \| 2 HP:0002090 \| Pneumonia \| 2 HP:0100280 \| Morbus Crohn \| 2 HP:0002107 \| Collapsed lung \| 1 HP:0001888 \| Lymphocytopenia \| 1 HP:0005517 \| T-cell lymphoma/leukemia \| 1 HP:0100279 \| Ulcerative colitis \| 1 HP:0000822 \| Hypertension \| 1 HP:0002583 \| Colitis \| 1 HP:0005523 \| Lymphoproliferative disorder \| 1 HP:0003774 \| End-stage renal failure \| 1 HP:0012190 \| T cell lymphoma \| 1 HP:0000099 \| Glomerular nephritis \| 1 HP:0006530 \| Interstitial lung disease \| 1 HP:0005387 \| Combined immunodeficiency \| 1

Disease ID	720
Disease	pneumocystosis
Manually Symptom	UMLS \| Name(Total Manually Symptoms:2) C2711548 \| infectious process C0024291 \| hemophagocytic syndrome
Text Mined Symptom	UMLS \| Name \| Sentences' Count(Total Symptoms:3) C0264490 \| acute respiratory failure \| 2 C0029118 \| opportunistic infections \| 1 C0009450 \| infection \| 1

Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)

Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)

All Snps(Total Genotypes:1)
snpId	pubmedId	geneId	geneSymbol	diseaseId	sourceId	sentence	score	Year	geneSymbol_dbSNP	CHROMOSOME	POS	REF	ALT
rs3204849	22046140	9034	CCRL2	umls:C1535939	BeFree	Role of exonic variation in chemokine receptor genes on AIDS: CCRL2 F167Y association with pneumocystis pneumonia.	0.000271442	2011	CCRL2;LOC102724297	3	46408579	T	A

GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)

GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)

Mapped by lexical matching(Total Items:0)
(Waiting for update.)

Mapped by homologous gene(Total Items:0)
(Waiting for update.)

Disease ID	720
Disease	pneumocystosis
Case	(Waiting for update.)

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