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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   patent arterial duct
  

Disease ID 311
Disease patent arterial duct
Definition
A congenital heart defect characterized by the persistent opening of fetal DUCTUS ARTERIOSUS that connects the PULMONARY ARTERY to the descending aorta (AORTA, DESCENDING) allowing unoxygenated blood to bypass the lung and flow to the PLACENTA. Normally, the ductus is closed shortly after birth.
Synonym
arteriosis ductus patent
arteriosus ductus patent
ductus arteriosus persistent
ductus arteriosus, patent
ductus arteriosus, patent [disease/finding]
patency of the ductus arteriosus
patent arteriosus ductus
patent ductus arteriosis
patent ductus arteriosus
patent ductus arteriosus (disorder)
patent ductus arteriosus - persisting type
patent ductus botalli
pda
pda - patent ductus arteriosus
persistent arterial duct
persistent ductus arteriosus
Orphanet
OMIM
DOID
ICD10
UMLS
C0013274
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:29)
C0020542  |  pulmonary hypertension  |  11
C0020538  |  hypertension  |  10
C1619734  |  pulmonary arterial hypertension  |  6
C0014118  |  endocarditis  |  4
C0018818  |  ventricular septal defect  |  4
C0040034  |  thrombocytopenia  |  3
C0003486  |  aortic aneurysm  |  3
C0152021  |  congenital heart disease  |  3
C0002871  |  anemia  |  2
C0018799  |  heart disease  |  2
C0175703  |  tar syndrome  |  2
C0014121  |  infective endocarditis  |  2
C0265344  |  donohue syndrome  |  1
C0040188  |  tic disorders  |  1
C0016522  |  secundum atrial septal defect  |  1
C0018801  |  heart failure  |  1
C0008924  |  cleft lip  |  1
C0018818  |  ventricular septal defects  |  1
C0021845  |  intestinal perforation  |  1
C0018802  |  congestive heart failure  |  1
C0002878  |  hemolytic anemia  |  1
C0020501  |  primary hyperoxaluria  |  1
C0026269  |  mitral stenosis  |  1
C1960469  |  left ventricular noncompaction  |  1
C0002888  |  megaloblastic anemia  |  1
C0008925  |  cleft palate  |  1
C0018816  |  septal defects  |  1
C1704437  |  respiratory distress syndrome  |  1
C0264766  |  rheumatic mitral stenosis  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:5)
4878  |  NPPA  |  CTD_human
5740  |  PTGIS  |  CTD_human
7021  |  TFAP2B  |  CTD_human
185  |  AGTR1  |  CTD_human
7185  |  TRAF1  |  CTD_human
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:130)
4629  |  MYH11  |  CIPHER
19  |  ABCA1  |  CIPHER
85320  |  ABCC11  |  CIPHER
154  |  ADRB2  |  CIPHER
8644  |  AKR1C3  |  CIPHER
217  |  ALDH2  |  CIPHER
335  |  APOA1  |  CIPHER
337  |  APOA4  |  CIPHER
116519  |  APOA5  |  CIPHER
338  |  APOB  |  CIPHER
344  |  APOC2  |  CIPHER
345  |  APOC3  |  CIPHER
348  |  APOE  |  CIPHER
329  |  BIRC2  |  CIPHER
330  |  BIRC3  |  CIPHER
1071  |  CETP  |  CIPHER
3075  |  CFH  |  CIPHER
55636  |  CHD7  |  CIPHER
1137  |  CHRNA4  |  CIPHER
1394  |  CRHR1  |  CIPHER
1583  |  CYP11A1  |  CIPHER
1584  |  CYP11B1  |  CIPHER
1586  |  CYP17A1  |  CIPHER
1543  |  CYP1A1  |  CIPHER
1544  |  CYP1A2  |  CIPHER
1557  |  CYP2C19  |  CIPHER
1559  |  CYP2C9  |  CIPHER
1565  |  CYP2D6  |  CIPHER
1571  |  CYP2E1  |  CIPHER
1644  |  DDC  |  CIPHER
1672  |  DEFB1  |  CIPHER
1718  |  DHCR24  |  CIPHER
1717  |  DHCR7  |  CIPHER
1719  |  DHFR  |  CIPHER
1906  |  EDN1  |  CIPHER
1907  |  EDN2  |  CIPHER
2033  |  EP300  |  CIPHER
2052  |  EPHX1  |  CIPHER
2099  |  ESR1  |  CIPHER
2162  |  F13A1  |  CIPHER
2147  |  F2  |  CIPHER
2153  |  F5  |  CIPHER
355  |  FAS  |  CIPHER
2326  |  FMO1  |  CIPHER
2328  |  FMO3  |  CIPHER
2348  |  FOLR1  |  CIPHER
9568  |  GABBR2  |  CIPHER
2618  |  GART  |  CIPHER
2811  |  GP1BA  |  CIPHER
51206  |  GP6  |  CIPHER
2952  |  GSTT1  |  CIPHER
3106  |  HLA-B  |  CIPHER
3135  |  HLA-G  |  CIPHER
3156  |  HMGCR  |  CIPHER
3248  |  HPGD  |  CIPHER
3290  |  HSD11B1  |  CIPHER
3291  |  HSD11B2  |  CIPHER
3283  |  HSD3B1  |  CIPHER
3458  |  IFNG  |  CIPHER
3479  |  IGF1  |  CIPHER
3481  |  IGF2  |  CIPHER
3586  |  IL10  |  CIPHER
3587  |  IL10RA  |  CIPHER
3552  |  IL1A  |  CIPHER
3553  |  IL1B  |  CIPHER
7850  |  IL1R2  |  CIPHER
3557  |  IL1RN  |  CIPHER
3565  |  IL4  |  CIPHER
3567  |  IL5  |  CIPHER
3569  |  IL6  |  CIPHER
3673  |  ITGA2  |  CIPHER
3690  |  ITGB3  |  CIPHER
3782  |  KCNN3  |  CIPHER
3931  |  LCAT  |  CIPHER
3949  |  LDLR  |  CIPHER
3990  |  LIPC  |  CIPHER
4023  |  LPL  |  CIPHER
4153  |  MBL2  |  CIPHER
4312  |  MMP1  |  CIPHER
4318  |  MMP9  |  CIPHER
4522  |  MTHFD1  |  CIPHER
4524  |  MTHFR  |  CIPHER
4548  |  MTR  |  CIPHER
4552  |  MTRR  |  CIPHER
10  |  NAT2  |  CIPHER
4837  |  NNMT  |  CIPHER
4843  |  NOS2  |  CIPHER
1728  |  NQO1  |  CIPHER
2908  |  NR3C1  |  CIPHER
4988  |  OPRM1  |  CIPHER
5020  |  OXT  |  CIPHER
5021  |  OXTR  |  CIPHER
5241  |  PGR  |  CIPHER
5321  |  PLA2G4A  |  CIPHER
5728  |  PTEN  |  CIPHER
5731  |  PTGER1  |  CIPHER
5732  |  PTGER2  |  CIPHER
5734  |  PTGER4  |  CIPHER
9536  |  PTGES  |  CIPHER
80142  |  PTGES2  |  CIPHER
5737  |  PTGFR  |  CIPHER
5740  |  PTGIS  |  CIPHER;CTD_human
5742  |  PTGS1  |  CIPHER
5743  |  PTGS2  |  CIPHER
5781  |  PTPN11  |  CIPHER
84268  |  RPAIN  |  CIPHER
866  |  SERPINA6  |  CIPHER
6439  |  SFTPB  |  CIPHER
6441  |  SFTPD  |  CIPHER
6470  |  SHMT1  |  CIPHER
6573  |  SLC19A1  |  CIPHER
283652  |  SLC24A5  |  CIPHER
6899  |  TBX1  |  CIPHER
6910  |  TBX5  |  CIPHER
7021  |  TFAP2B  |  CIPHER;CTD_human
7040  |  TGFB1  |  CIPHER
7046  |  TGFBR1  |  CIPHER
7048  |  TGFBR2  |  CIPHER
7099  |  TLR4  |  CIPHER
7124  |  TNF  |  CIPHER
7128  |  TNFAIP3  |  CIPHER
7132  |  TNFRSF1A  |  CIPHER
7133  |  TNFRSF1B  |  CIPHER
8717  |  TRADD  |  CIPHER
7185  |  TRAF1  |  CIPHER;CTD_human
7186  |  TRAF2  |  CIPHER
7422  |  VEGFA  |  CIPHER
9839  |  ZEB2  |  CIPHER
4878  |  NPPA  |  CTD_human
185  |  AGTR1  |  CTD_human
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:105)
6833  |  ABCC8  |  1.615  |  DISEASES
94  |  ACVRL1  |  2.41  |  DISEASES
84890  |  ADO  |  5.447  |  DISEASES
257  |  ALX3  |  1.111  |  DISEASES
27301  |  APEX2  |  2.595  |  DISEASES
170302  |  ARX  |  1.383  |  DISEASES
55252  |  ASXL2  |  2.172  |  DISEASES
6314  |  ATXN7  |  1.778  |  DISEASES
554  |  AVPR2  |  2.777  |  DISEASES
80114  |  BICC1  |  2.105  |  DISEASES
773  |  CACNA1A  |  1.159  |  DISEASES
8913  |  CACNA1G  |  1.276  |  DISEASES
23066  |  CAND2  |  1.512  |  DISEASES
1028  |  CDKN1C  |  1.962  |  DISEASES
55835  |  CENPJ  |  1.771  |  DISEASES
55636  |  CHD7  |  2.28  |  DISEASES
10370  |  CITED2  |  1.402  |  DISEASES
79827  |  CLMP  |  2.772  |  DISEASES
152330  |  CNTN4  |  1.803  |  DISEASES
78987  |  CRELD1  |  5.006  |  DISEASES
1471  |  CST3  |  1.501  |  DISEASES
1486  |  CTBS  |  1.861  |  DISEASES
57703  |  CWC22  |  1.233  |  DISEASES
9547  |  CXCL14  |  2.488  |  DISEASES
51339  |  DACT1  |  2.958  |  DISEASES
55510  |  DDX43  |  1.599  |  DISEASES
1718  |  DHCR24  |  1.172  |  DISEASES
1892  |  ECHS1  |  1.82  |  DISEASES
1906  |  EDN1  |  2.038  |  DISEASES
255520  |  ELMOD2  |  3.322  |  DISEASES
3266  |  ERAS  |  2.157  |  DISEASES
11082  |  ESM1  |  1.275  |  DISEASES
2070  |  EYA4  |  1.676  |  DISEASES
2316  |  FLNA  |  2.541  |  DISEASES
342184  |  FMN1  |  1.243  |  DISEASES
57818  |  G6PC2  |  1.288  |  DISEASES
2550  |  GABBR1  |  1.571  |  DISEASES
2626  |  GATA4  |  2.664  |  DISEASES
3055  |  HCK  |  1.661  |  DISEASES
388585  |  HES5  |  1.442  |  DISEASES
81502  |  HM13  |  1.705  |  DISEASES
60495  |  HPSE2  |  1.122  |  DISEASES
3347  |  HTN3  |  1.117  |  DISEASES
3476  |  IGBP1  |  1.431  |  DISEASES
259307  |  IL4I1  |  1.248  |  DISEASES
102723508  |  KANTR  |  1.474  |  DISEASES
3767  |  KCNJ11  |  1.655  |  DISEASES
7044  |  LEFTY2  |  1.755  |  DISEASES
3987  |  LIMS1  |  3.352  |  DISEASES
9782  |  MATR3  |  1.963  |  DISEASES
9656  |  MDC1  |  1.347  |  DISEASES
9968  |  MED12  |  1.004  |  DISEASES
8972  |  MGAM  |  1.052  |  DISEASES
4512  |  MT-CO1  |  1.608  |  DISEASES
4629  |  MYH11  |  3.117  |  DISEASES
4642  |  MYO1D  |  2.509  |  DISEASES
93649  |  MYOCD  |  2.2  |  DISEASES
114803  |  MYSM1  |  2.725  |  DISEASES
1482  |  NKX2-5  |  3.082  |  DISEASES
4855  |  NOTCH4  |  1.039  |  DISEASES
344022  |  NOTO  |  1.671  |  DISEASES
4879  |  NPPB  |  3.261  |  DISEASES
64324  |  NSD1  |  2.957  |  DISEASES
5048  |  PAFAH1B1  |  2.001  |  DISEASES
54510  |  PCDH18  |  2.845  |  DISEASES
5136  |  PDE1A  |  2.335  |  DISEASES
9124  |  PDLIM1  |  2.002  |  DISEASES
93166  |  PRDM6  |  4.068  |  DISEASES
256297  |  PTF1A  |  1.73  |  DISEASES
5733  |  PTGER3  |  1.852  |  DISEASES
5742  |  PTGS1  |  1.778  |  DISEASES
5743  |  PTGS2  |  1.808  |  DISEASES
51715  |  RAB23  |  1.804  |  DISEASES
5887  |  RAD23B  |  1.367  |  DISEASES
222546  |  RFX6  |  1.562  |  DISEASES
4920  |  ROR2  |  1.726  |  DISEASES
23212  |  RRS1  |  1.02  |  DISEASES
6303  |  SAT1  |  1.06  |  DISEASES
404552  |  SCGB1D4  |  1.109  |  DISEASES
871  |  SERPINH1  |  1.277  |  DISEASES
6439  |  SFTPB  |  1.815  |  DISEASES
347734  |  SLC35B2  |  1.027  |  DISEASES
8243  |  SMC1A  |  1.396  |  DISEASES
9126  |  SMC3  |  1.511  |  DISEASES
80309  |  SPHKAP  |  3.133  |  DISEASES
55576  |  STAB2  |  1.293  |  DISEASES
64220  |  STRA6  |  1.796  |  DISEASES
6899  |  TBX1  |  1.484  |  DISEASES
57057  |  TBX20  |  1.805  |  DISEASES
7020  |  TFAP2A  |  3.732  |  DISEASES
7021  |  TFAP2B  |  5.549  |  DISEASES
7042  |  TGFB2  |  1.021  |  DISEASES
7046  |  TGFBR1  |  1.227  |  DISEASES
7048  |  TGFBR2  |  2.715  |  DISEASES
7137  |  TNNI3  |  2.257  |  DISEASES
7139  |  TNNT2  |  2.769  |  DISEASES
7185  |  TRAF1  |  1.097  |  DISEASES
79054  |  TRPM8  |  1.033  |  DISEASES
55503  |  TRPV6  |  1.123  |  DISEASES
7247  |  TSN  |  2.557  |  DISEASES
7273  |  TTN  |  1.946  |  DISEASES
51366  |  UBR5  |  1.16  |  DISEASES
9213  |  XPR1  |  1.681  |  DISEASES
7760  |  ZNF213  |  3.643  |  DISEASES
57862  |  ZNF410  |  1.731  |  DISEASES
Locus(Waiting for update.)
Disease ID 311
Disease patent arterial duct
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:45)
HP:0002092  |  Pulmonary artery hypertension  |  13
HP:0000822  |  Hypertension  |  11
HP:0001518  |  Small for gestational age  |  7
HP:0012382  |  Left-to-right shunt  |  6
HP:0002617  |  Aneurysmal dilatation  |  5
HP:0001631  |  Atria septal defect  |  5
HP:0001629  |  Ventricular septal defects  |  4
HP:0001873  |  Low platelet count  |  3
HP:0004942  |  Aortic aneurysm  |  3
HP:0100806  |  Sepsis  |  3
HP:0012020  |  Right aortic arch  |  3
HP:0012383  |  Bidirectional shunt  |  3
HP:0001903  |  Anemia  |  2
HP:0011626  |  Scimitar anomaly  |  2
HP:0100584  |  Endocarditis  |  2
HP:0002098  |  Respiratory distress  |  2
HP:0001671  |  Abnormality of the cardiac septa  |  1
HP:0005162  |  Left ventricular impairment  |  1
HP:0001718  |  Mitral stenosis  |  1
HP:0001680  |  Coarctation of aorta  |  1
HP:0011611  |  Interrupted aortic arch  |  1
HP:0001878  |  Haemolytic anaemia  |  1
HP:0011662  |  Tricuspid atresia  |  1
HP:0004971  |  Pulmonary artery hypoplasia  |  1
HP:0006689  |  Bacterial endocarditis  |  1
HP:0001635  |  Congestive heart failure  |  1
HP:0030148  |  Heart murmur  |  1
HP:0002631  |  Ascending aortic aneurysm  |  1
HP:0001889  |  Megaloblastic anemia  |  1
HP:0011641  |  Coronary artery fistula  |  1
HP:0003470  |  Inability to move  |  1
HP:0004935  |  Pulmonary atresia  |  1
HP:0004961  |  Pulmonary artery sling  |  1
HP:0004937  |  Pulmonary artery aneurysm  |  1
HP:0030682  |  Left ventricular noncompaction  |  1
HP:0002835  |  Aspiration  |  1
HP:0100632  |  Pulmonary sequestration  |  1
HP:0100033  |  Tic disorder  |  1
HP:0001684  |  Secundum atrial septal defect  |  1
HP:0000175  |  Palatoschisis  |  1
HP:0001636  |  Tetrology of fallot  |  1
HP:0001217  |  Digital clubbing  |  1
HP:0001605  |  Vocal cord paralysis  |  1
HP:0000062  |  Ambiguous external genitalia  |  1
HP:0030746  |  Intraventricular hemorrhage  |  1
Disease ID 311
Disease patent arterial duct
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:9)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs1056567193363707185TRAF1umls:C0013274GAD[Determination of genetic predisposition to patent ductus arteriosus in preterm infants.]0.1223670322009PHF199120869767AG
rs173365193363701394CRHR1umls:C0013274GAD[Determination of genetic predisposition to patent ductus arteriosus in preterm infants.]0.0023670322009CRHR1;MGC57346-CRHR11745823708AG
rs1973028193363703990LIPCumls:C0013274GAD[Determination of genetic predisposition to patent ductus arteriosus in preterm infants.]0.0023670322009LIPC;LOC1019286941558499155TC
rs2817399205817417021TFAP2Bumls:C0013274BeFreeThree independent risk factors (immature gestation, absence of antenatal glucocorticoid exposure, and presence of the rs2817399(A) allele of the gene TFAP2B) are associated with patent ductus arteriosus (PDAs) that fail to close during prostaglandin inhibition.0.1267200332010TFAP2B650836808AG
rs28360521193363701565CYP2D6umls:C0013274GAD[Determination of genetic predisposition to patent ductus arteriosus in preterm infants.]0.0023670322009CYP2D62242132969CT
rs397507444245661974524MTHFRumls:C0013274BeFreeMethylenetetrahydrofolate reductase (MTHFR) C677T and A1298C gene polymorphisms are associated with the risk of patent ductus arteriosus (PDA) congenital heart defects.0.0029099162014MTHFR111794407TG
rs493694193363705740PTGISumls:C0013274GAD[Overall, our data support a role for genetic variations in transcription factor AP-2 beta, tumor necrosis factor receptor-associated factor 1, and prostacyclin synthase in the persistent patency of the ductus arteriosus seen in preterm infants.]0.1226384742009PTGIS;LOC1019274862049566593TC
rs711752193363701071CETPumls:C0013274GAD[Determination of genetic predisposition to patent ductus arteriosus in preterm infants.]0.0023670322009CETP1656962299GA
rs987237193363707021TFAP2Bumls:C0013274GAD[Overall, our data support a role for genetic variations in transcription factor AP-2 beta, tumor necrosis factor receptor-associated factor 1, and prostacyclin synthase in the persistent patency of the ductus arteriosus seen in preterm infants.]0.1267200332009TFAP2B650835337AG
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
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Mapped by lexical matching(Total Items:0)
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Mapped by homologous gene(Total Items:0)
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Disease ID 311
Disease patent arterial duct
Case(Waiting for update.)