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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   nonsyndromic deafness
  

Disease ID 1822
Disease nonsyndromic deafness
Definition
Nonsyndromic deafness is hearing loss that is not associated with other signs and symptoms. In contrast, syndromic deafness involves hearing loss that occurs with abnormalities in other parts of the body.Genetic changes are related to the following types of nonsyndromic deafness. - Wikipedia
Reference: https://en.wikipedia.org/wiki/nonsyndromic deafness
Synonym
isolated deafness
nonsyndromic hearing impairment
nonsyndromic hearing loss
undifferentiated deafness
DOID
UMLS
C3711374
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:4)
C1863752  |  enlarged vestibular aqueduct  |  2
C0022116  |  ischemia  |  1
C0042568  |  vertebrobasilar ischemia  |  1
C0026769  |  multiple sclerosis  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:90)
5269  |  SERPINB6  |  UniProtKB-KW
53904  |  MYO3A  |  UniProtKB-KW
1687  |  DFNA5  |  UniProtKB-KW;GHR
9381  |  OTOF  |  UniProtKB-KW;GHR
340990  |  OTOG  |  UniProtKB-KW
79784  |  MYH14  |  UniProtKB-KW
1288  |  COL4A6  |  UniProtKB-KW
87178  |  PNPT1  |  UniProtKB-KW
64072  |  CDH23  |  UniProtKB-KW;GHR
4233  |  MET  |  UniProtKB-KW
4647  |  MYO7A  |  UniProtKB-KW;GHR
5631  |  PRPS1  |  UniProtKB-KW
3082  |  HGF  |  UniProtKB-KW
2706  |  GJB2  |  UniProtKB-KW;GHR
57465  |  TBC1D24  |  UniProtKB-KW
56616  |  DIABLO  |  UniProtKB-KW
286262  |  TPRN  |  UniProtKB-KW
4254  |  KITLG  |  UniProtKB-KW
51168  |  MYO15A  |  UniProtKB-KW;GHR
71  |  ACTG1  |  UniProtKB-KW;GHR
161497  |  STRC  |  UniProtKB-KW;GHR
4627  |  MYH9  |  UniProtKB-KW
107  |  ADCY1  |  UniProtKB-KW
10518  |  CIB2  |  UniProtKB-KW
11078  |  TRIOBP  |  UniProtKB-KW;GHR
10083  |  USH1C  |  UniProtKB-KW;GHR
5459  |  POU4F3  |  UniProtKB-KW
10804  |  GJB6  |  UniProtKB-KW;GHR
23676  |  SMPX  |  UniProtKB-KW
283310  |  OTOGL  |  UniProtKB-KW
1302  |  COL11A2  |  CLINVAR;GHR
7466  |  WFS1  |  UniProtKB-KW;GHR
253827  |  MSRB3  |  UniProtKB-KW
388551  |  CEACAM16  |  UniProtKB-KW
389207  |  GRXCR1  |  UniProtKB-KW
7007  |  TECTA  |  UniProtKB-KW;GHR
5456  |  POU3F4  |  UniProtKB-KW;GHR
79731  |  NARS2  |  UniProtKB-KW
5962  |  RDX  |  UniProtKB-KW
51473  |  DCDC2  |  CLINVAR;UniProtKB-KW
22953  |  P2RX2  |  UniProtKB-KW
491  |  ATP2B2  |  GHR
374462  |  PTPRQ  |  UniProtKB-KW
23562  |  CLDN14  |  UniProtKB-KW;GHR
222662  |  LHFPL5  |  UniProtKB-KW;GHR
65217  |  PCDH15  |  UniProtKB-KW;GHR
2707  |  GJB3  |  UniProtKB-KW;GHR
375611  |  SLC26A5  |  UniProtKB-KW
246213  |  SLC17A8  |  UniProtKB-KW
4646  |  MYO6  |  UniProtKB-KW;GHR
9455  |  HOMER2  |  UniProtKB-KW
1690  |  COCH  |  UniProtKB-KW;GHR
83715  |  ESPN  |  UniProtKB-KW;GHR
1428  |  CRYM  |  UniProtKB-KW
2070  |  EYA4  |  UniProtKB-KW;GHR
220074  |  LRTOMT  |  UniProtKB-KW
124842  |  TMEM132E  |  UniProtKB-KW
9294  |  S1PR2  |  UniProtKB-KW
117531  |  TMC1  |  UniProtKB-KW;GHR
79977  |  GRHL2  |  UniProtKB-KW
5172  |  SLC26A4  |  UniProtKB-KW;GHR
9132  |  KCNQ4  |  UniProtKB-KW;GHR
6495  |  SIX1  |  UniProtKB-KW
84173  |  ELMOD3  |  UniProtKB-KW
51475  |  CABP2  |  UniProtKB-KW
54084  |  TSPEAR  |  UniProtKB-KW
125336  |  LOXHD1  |  UniProtKB-KW
4512  |  MT-CO1  |  UniProtKB-KW
286676  |  ILDR1  |  UniProtKB-KW
9750  |  FAM65B  |  UniProtKB-KW
163183  |  SYNE4  |  UniProtKB-KW
146183  |  OTOA  |  UniProtKB-KW
2103  |  ESRRB  |  UniProtKB-KW
152137  |  CCDC50  |  UniProtKB-KW
494513  |  DFNB59  |  UniProtKB-KW;GHR
81624  |  DIAPH3  |  UniProtKB-KW
8556  |  CDC14A  |  UniProtKB-KW
2059  |  EPS8  |  UniProtKB-KW
1729  |  DIAPH1  |  UniProtKB-KW
64699  |  TMPRSS3  |  UniProtKB-KW;GHR
4640  |  MYO1A  |  GHR
153562  |  MARVELD2  |  UniProtKB-KW
53405  |  CLIC5  |  UniProtKB-KW
3735  |  KARS  |  UniProtKB-KW
8763  |  CD164  |  UniProtKB-KW
3371  |  TNC  |  UniProtKB-KW
259236  |  TMIE  |  UniProtKB-KW;GHR
4171  |  MCM2  |  UniProtKB-KW
9885  |  OSBPL2  |  UniProtKB-KW
643226  |  GRXCR2  |  UniProtKB-KW
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:1)
2706  |  GJB2  |  CIPHER
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:191)
71  |  ACTG1  |  4.463  |  DISEASES
9507  |  ADAMTS4  |  1.062  |  DISEASES
104  |  ADARB1  |  1.474  |  DISEASES
491  |  ATP2B2  |  1.159  |  DISEASES
493  |  ATP2B4  |  1.108  |  DISEASES
7917  |  BAG6  |  1.507  |  DISEASES
10134  |  BCAP31  |  1.408  |  DISEASES
55814  |  BDP1  |  1.535  |  DISEASES
254065  |  BRWD3  |  2.392  |  DISEASES
7809  |  BSND  |  2.356  |  DISEASES
689  |  BTF3  |  1.414  |  DISEASES
755  |  C21orf2  |  2.7  |  DISEASES
774  |  CACNA1B  |  1.092  |  DISEASES
152137  |  CCDC50  |  3.058  |  DISEASES
8556  |  CDC14A  |  1.57  |  DISEASES
64072  |  CDH23  |  5.982  |  DISEASES
388551  |  CEACAM16  |  3.97  |  DISEASES
10519  |  CIB1  |  3.174  |  DISEASES
1187  |  CLCNKA  |  1.572  |  DISEASES
1188  |  CLCNKB  |  1.53  |  DISEASES
23562  |  CLDN14  |  4.797  |  DISEASES
137075  |  CLDN23  |  2.039  |  DISEASES
9080  |  CLDN9  |  2.171  |  DISEASES
9022  |  CLIC3  |  2.015  |  DISEASES
7401  |  CLRN1  |  1.506  |  DISEASES
7555  |  CNBP  |  1.028  |  DISEASES
22837  |  COBLL1  |  1.879  |  DISEASES
1302  |  COL11A2  |  4.973  |  DISEASES
1287  |  COL4A5  |  1.926  |  DISEASES
1288  |  COL4A6  |  1.046  |  DISEASES
1413  |  CRYBA4  |  1.777  |  DISEASES
1415  |  CRYBB2  |  1.187  |  DISEASES
155051  |  CRYGN  |  2.605  |  DISEASES
2017  |  CTTN  |  1.049  |  DISEASES
7818  |  DAP3  |  1.963  |  DISEASES
131566  |  DCBLD2  |  2.058  |  DISEASES
51473  |  DCDC2  |  1.232  |  DISEASES
149069  |  DCDC2B  |  3.49  |  DISEASES
1668  |  DEFA3  |  1.065  |  DISEASES
1687  |  DFNA5  |  5.065  |  DISEASES
494513  |  DFNB59  |  5.466  |  DISEASES
1729  |  DIAPH1  |  3.996  |  DISEASES
81624  |  DIAPH3  |  3.795  |  DISEASES
23312  |  DMXL2  |  2.271  |  DISEASES
9732  |  DOCK4  |  2.518  |  DISEASES
79659  |  DYNC2H1  |  1.548  |  DISEASES
8291  |  DYSF  |  1.674  |  DISEASES
79813  |  EHMT1  |  1.062  |  DISEASES
64787  |  EPS8L2  |  2.703  |  DISEASES
83715  |  ESPN  |  4.524  |  DISEASES
2103  |  ESRRB  |  3.308  |  DISEASES
2138  |  EYA1  |  2.859  |  DISEASES
2070  |  EYA4  |  5.18  |  DISEASES
23201  |  FAM168A  |  1.961  |  DISEASES
54757  |  FAM20A  |  1.415  |  DISEASES
60343  |  FAM3A  |  2.158  |  DISEASES
54097  |  FAM3B  |  1.318  |  DISEASES
10447  |  FAM3C  |  2.393  |  DISEASES
131177  |  FAM3D  |  2.078  |  DISEASES
9873  |  FCHSD2  |  1.627  |  DISEASES
654463  |  FER1L6  |  3.006  |  DISEASES
2257  |  FGF12  |  1.576  |  DISEASES
2248  |  FGF3  |  1.426  |  DISEASES
342184  |  FMN1  |  1.564  |  DISEASES
22862  |  FNDC3A  |  1.099  |  DISEASES
2302  |  FOXJ1  |  1.182  |  DISEASES
6624  |  FSCN1  |  1.012  |  DISEASES
53828  |  FXYD4  |  3.053  |  DISEASES
57704  |  GBA2  |  1.168  |  DISEASES
10755  |  GIPC1  |  1.036  |  DISEASES
54810  |  GIPC2  |  2.124  |  DISEASES
2705  |  GJB1  |  1.771  |  DISEASES
2706  |  GJB2  |  8.111  |  DISEASES
2707  |  GJB3  |  5.955  |  DISEASES
127534  |  GJB4  |  3.184  |  DISEASES
2709  |  GJB5  |  2.02  |  DISEASES
349149  |  GJC3  |  4.693  |  DISEASES
2710  |  GK  |  1.003  |  DISEASES
2801  |  GOLGA2  |  2.22  |  DISEASES
57120  |  GOPC  |  1.449  |  DISEASES
29841  |  GRHL1  |  1.639  |  DISEASES
389207  |  GRXCR1  |  4.614  |  DISEASES
643226  |  GRXCR2  |  3.49  |  DISEASES
84705  |  GTPBP3  |  2.524  |  DISEASES
340784  |  HMX3  |  2.628  |  DISEASES
3198  |  HOXA1  |  1.275  |  DISEASES
3326  |  HSP90AB1  |  1.514  |  DISEASES
286676  |  ILDR1  |  5.515  |  DISEASES
83943  |  IMMP2L  |  1.61  |  DISEASES
387755  |  INSC  |  1.975  |  DISEASES
9452  |  ITM2A  |  2.181  |  DISEASES
3735  |  KARS  |  1.922  |  DISEASES
3766  |  KCNJ10  |  2.903  |  DISEASES
11133  |  KPTN  |  2.022  |  DISEASES
55203  |  LGI2  |  1.753  |  DISEASES
375612  |  LHFPL3  |  2.499  |  DISEASES
222662  |  LHFPL5  |  4.481  |  DISEASES
3980  |  LIG3  |  1.586  |  DISEASES
3996  |  LLGL1  |  2.045  |  DISEASES
474354  |  LRRC18  |  2.67  |  DISEASES
51599  |  LSR  |  2.29  |  DISEASES
4134  |  MAP4  |  1.146  |  DISEASES
153562  |  MARVELD2  |  5.149  |  DISEASES
84299  |  MIEN1  |  2.426  |  DISEASES
4359  |  MPZ  |  1.711  |  DISEASES
6182  |  MRPL12  |  2.291  |  DISEASES
253827  |  MSRB3  |  3.836  |  DISEASES
4508  |  MT-ATP6  |  1.233  |  DISEASES
4512  |  MT-CO1  |  2.503  |  DISEASES
4538  |  MT-ND4  |  1.411  |  DISEASES
25821  |  MTO1  |  3.122  |  DISEASES
4549  |  MT-RNR1  |  5.88  |  DISEASES
4574  |  MT-TS1  |  4.563  |  DISEASES
29116  |  MYLIP  |  1.263  |  DISEASES
4542  |  MYO1F  |  2.578  |  DISEASES
140469  |  MYO3B  |  2.389  |  DISEASES
4644  |  MYO5A  |  1.442  |  DISEASES
4646  |  MYO6  |  5.17  |  DISEASES
4647  |  MYO7A  |  5.687  |  DISEASES
4649  |  MYO9A  |  2.036  |  DISEASES
26509  |  MYOF  |  3.319  |  DISEASES
29937  |  NENF  |  2.097  |  DISEASES
146183  |  OTOA  |  4.742  |  DISEASES
340990  |  OTOG  |  4.445  |  DISEASES
283310  |  OTOGL  |  3.299  |  DISEASES
22953  |  P2RX2  |  2.627  |  DISEASES
56666  |  PANX2  |  1.5  |  DISEASES
25973  |  PARS2  |  2.033  |  DISEASES
65217  |  PCDH15  |  5.192  |  DISEASES
5101  |  PCDH9  |  1.818  |  DISEASES
79955  |  PDZD7  |  3.829  |  DISEASES
221692  |  PHACTR1  |  1.391  |  DISEASES
58473  |  PLEKHB1  |  1.514  |  DISEASES
25894  |  PLEKHG4  |  1.094  |  DISEASES
5456  |  POU3F4  |  5.915  |  DISEASES
3275  |  PRMT2  |  1.826  |  DISEASES
5631  |  PRPS1  |  3.496  |  DISEASES
51334  |  PRR16  |  1.081  |  DISEASES
5802  |  PTPRS  |  1.355  |  DISEASES
169714  |  QSOX2  |  2.795  |  DISEASES
5884  |  RAD17  |  1.033  |  DISEASES
5962  |  RDX  |  1.201  |  DISEASES
10287  |  RGS19  |  1.417  |  DISEASES
5269  |  SERPINB6  |  1.058  |  DISEASES
22941  |  SHANK2  |  2.585  |  DISEASES
26503  |  SLC17A5  |  1.437  |  DISEASES
10166  |  SLC25A15  |  2.948  |  DISEASES
293  |  SLC25A6  |  1.115  |  DISEASES
10861  |  SLC26A1  |  2.849  |  DISEASES
284129  |  SLC26A11  |  3.072  |  DISEASES
1811  |  SLC26A3  |  2.956  |  DISEASES
65010  |  SLC26A6  |  3.372  |  DISEASES
116369  |  SLC26A8  |  3.119  |  DISEASES
115019  |  SLC26A9  |  1.843  |  DISEASES
64924  |  SLC30A5  |  1.676  |  DISEASES
54020  |  SLC37A1  |  2.739  |  DISEASES
57153  |  SLC44A2  |  2.704  |  DISEASES
6522  |  SLC4A2  |  1.583  |  DISEASES
23676  |  SMPX  |  4.188  |  DISEASES
6663  |  SOX10  |  1.424  |  DISEASES
161497  |  STRC  |  5.296  |  DISEASES
3703  |  STT3A  |  2.822  |  DISEASES
29091  |  STXBP6  |  2.192  |  DISEASES
255928  |  SYT14  |  2.512  |  DISEASES
84258  |  SYT3  |  2.448  |  DISEASES
84958  |  SYTL1  |  2.556  |  DISEASES
129685  |  TAF8  |  1.255  |  DISEASES
6975  |  TECTB  |  4.036  |  DISEASES
7019  |  TFAM  |  1.047  |  DISEASES
51106  |  TFB1M  |  3.899  |  DISEASES
7053  |  TGM3  |  2.027  |  DISEASES
1678  |  TIMM8A  |  1.7  |  DISEASES
9414  |  TJP2  |  2.286  |  DISEASES
117532  |  TMC2  |  4.571  |  DISEASES
342125  |  TMC3  |  3.367  |  DISEASES
23670  |  TMEM2  |  3.664  |  DISEASES
259236  |  TMIE  |  5.566  |  DISEASES
56649  |  TMPRSS4  |  5.438  |  DISEASES
10043  |  TOM1  |  1.515  |  DISEASES
286262  |  TPRN  |  5.002  |  DISEASES
11078  |  TRIOBP  |  5.174  |  DISEASES
7106  |  TSPAN4  |  1.908  |  DISEASES
54084  |  TSPEAR  |  2.642  |  DISEASES
7278  |  TUBA3C  |  2.46  |  DISEASES
113457  |  TUBA3D  |  1.132  |  DISEASES
89910  |  UBE3B  |  1.741  |  DISEASES
9354  |  UBE4A  |  1.945  |  DISEASES
10277  |  UBE4B  |  1.409  |  DISEASES
6843  |  VAMP1  |  1.45  |  DISEASES
8565  |  YARS  |  1.571  |  DISEASES
144348  |  ZNF664  |  2.312  |  DISEASES
Locus(Waiting for update.)
Disease ID 1822
Disease nonsyndromic deafness
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:4)
Disease ID 1822
Disease nonsyndromic deafness
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:12)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs104894396200964682706GJB2umls:C3711374BeFreePrevalence of the c.35delG and p.W24X mutations in the GJB2 gene in patients with nonsyndromic hearing loss from North-West Romania.0.0343212282010GJB21320189511CT
rs117685390236400912706GJB2umls:C3711374BeFreeIn a NSHI family, inheritance of the rs117685390 C allele segregated on independent chromosomes with NSHI in conjunction with heterozygous inheritance of c.35delG, the most common Caucasian mutation in the GJB2 coding region.0.0343212282013GJB21320193170AG
rs12190807320373850117531TMC1umls:C3711374BeFreeHigh frequency of the p.R34X mutation in the TMC1 gene associated with nonsyndromic hearing loss is due to founder effects.0.0021715352010TMC1972694578CT
rs1801002200964682706GJB2umls:C3711374BeFreePrevalence of the c.35delG and p.W24X mutations in the GJB2 gene in patients with nonsyndromic hearing loss from North-West Romania.0.0343212282010GJB21320189547CT,A
rs1801002236400912706GJB2umls:C3711374BeFreeIn a NSHI family, inheritance of the rs117685390 C allele segregated on independent chromosomes with NSHI in conjunction with heterozygous inheritance of c.35delG, the most common Caucasian mutation in the GJB2 coding region.0.0343212282013GJB21320189547CT,A
rs199606180241941964647MYO7Aumls:C3711374BeFreeThis finding further supports the premise that the MYO7A gene is responsible for two distinct diseases and gives evidence that the p.P1887L mutation in a homozygous state may be responsible for nonsyndromic hearing loss.0.0032573022013MYO7A1177206120CT
rs28931593253936582706GJB2umls:C3711374BeFreeTo the best of our knowledge, this is the first report from India on p.R75Q mutation in the GJB2 gene with nonsyndromic hearing loss.0.0343212282014GJB21320189358CT
rs28931593159962142706GJB2umls:C3711374BeFreeFunctional analysis of R75Q mutation in the gene coding for Connexin 26 identified in a family with nonsyndromic hearing loss.0.0343212282005GJB21320189358CT
rs3975145992308429087178PNPT1umls:C3711374BeFreeBy positional cloning, we identified a homozygous PNPT1 missense mutation (c.1424A>G predicting the protein substitution p.Glu475Gly) of a highly conserved PNPase residue within the second RNase-PH domain in a family affected by autosomal-recessive nonsyndromic hearing impairment.0.0002714422012PNPT1255656148TC
rs3975172552419419625861DFNB31umls:C3711374BeFreeMoreover, some individuals from the Palestinian family also harbored a novel heterozygous truncating variant (c.1267C>T/p.R423X) in the DFNB31 gene, which is involved in autosomal recessive nonsyndromic deafness type DFNB31 and Usher syndrome type II.0.0005428842013DFNB319114424483GA
rs606231410NA1302COL11A2umls:C3711374CLINVARNA0.12NACOL11A2633189443CA
rs794729665NA51473DCDC2umls:C3711374CLINVARNA0.12NADCDC2624178385TG
GWASdb Annotation(Total Genotypes:0)
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GWASdb Snp Trait(Total Genotypes:0)
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Mapped by lexical matching(Total Items:0)
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Mapped by homologous gene(Total Items:0)
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Disease ID 1822
Disease nonsyndromic deafness
Case(Waiting for update.)