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eRAM

encyclopedia of Rare Disease Annotation for Precision Medicine



   nephrocalcinosis
  

Disease ID 1230
Disease nephrocalcinosis
Definition
A condition characterized by calcification of the renal tissue itself. It is usually seen in distal RENAL TUBULAR ACIDOSIS with calcium deposition in the DISTAL KIDNEY TUBULES and the surrounding interstitium. Nephrocalcinosis causes RENAL INSUFFICIENCY.
Synonym
calcinosis renal
nephrocalcinoses
nephrocalcinosis (disorder)
nephrocalcinosis [disease/finding]
DOID
UMLS
C0027709
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:29)
C0035078  |  renal failure  |  5
C0033687  |  proteinuria  |  3
C0392525  |  nephrolithiasis  |  3
C0035078  |  kidney failure  |  3
C0004775  |  bartter syndrome  |  2
C0022658  |  nephropathy  |  2
C0020437  |  hypercalcemia  |  2
C0001126  |  renal tubular acidosis  |  2
C1527336  |  sjogren's syndrome  |  2
C0020502  |  hyperparathyroidism  |  2
C0409974  |  lupus erythematosus  |  1
C0020626  |  hypoparathyroidism  |  1
C0221002  |  primary hyperparathyroidism  |  1
C0086543  |  cataracts  |  1
C0022658  |  renal disease  |  1
C0010674  |  cystic fibrosis  |  1
C0015624  |  fanconi syndrome  |  1
C0022661  |  chronic kidney failure  |  1
C0027707  |  tubulointerstitial nephropathy  |  1
C1384514  |  primary aldosteronism  |  1
C0002452  |  amelogenesis imperfecta  |  1
C0011351  |  enamel hypoplasia  |  1
C0020437  |  hypercalcaemia  |  1
C0021053  |  immune disease  |  1
C0024141  |  systemic lupus erythematosus  |  1
C0022661  |  chronic renal failure  |  1
C0022660  |  acute renal failure  |  1
C0020456  |  hyperglycemia  |  1
C1565489  |  renal insufficiency  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:3)
5443  |  POMC  |  CTD_human
5251  |  PHEX  |  CTD_human
10861  |  SLC26A1  |  CTD_human
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:69)
55811  |  ADCY10  |  5.04  |  DISEASES
120  |  ADD3  |  1.399  |  DISEASES
249  |  ALPL  |  3.425  |  DISEASES
302  |  ANXA2  |  2.125  |  DISEASES
310  |  ANXA7  |  2.292  |  DISEASES
353  |  APRT  |  1.055  |  DISEASES
84239  |  ATP13A4  |  2.569  |  DISEASES
567  |  B2M  |  2.267  |  DISEASES
632  |  BGLAP  |  1.51  |  DISEASES
7809  |  BSND  |  2.729  |  DISEASES
779  |  CACNA1S  |  1.03  |  DISEASES
796  |  CALCA  |  2.405  |  DISEASES
846  |  CASR  |  4.587  |  DISEASES
1041  |  CDSN  |  1.391  |  DISEASES
1183  |  CLCN4  |  2.79  |  DISEASES
1184  |  CLCN5  |  6.591  |  DISEASES
1187  |  CLCNKA  |  1.885  |  DISEASES
1188  |  CLCNKB  |  4.81  |  DISEASES
23562  |  CLDN14  |  3.164  |  DISEASES
54805  |  CNNM2  |  2.023  |  DISEASES
56259  |  CTNNBL1  |  1.587  |  DISEASES
8029  |  CUBN  |  1.774  |  DISEASES
1730  |  DIAPH2  |  1.689  |  DISEASES
10117  |  ENAM  |  1.095  |  DISEASES
5167  |  ENPP1  |  2.47  |  DISEASES
54757  |  FAM20A  |  4.902  |  DISEASES
56975  |  FAM20C  |  3.357  |  DISEASES
2668  |  GDNF  |  1.582  |  DISEASES
2710  |  GK  |  1.405  |  DISEASES
2821  |  GPI  |  3.1  |  DISEASES
112817  |  HOGA1  |  3.787  |  DISEASES
3481  |  IGF2  |  1.064  |  DISEASES
387755  |  INSC  |  1.375  |  DISEASES
3758  |  KCNJ1  |  4.877  |  DISEASES
9365  |  KL  |  2.21  |  DISEASES
4221  |  MEN1  |  1.029  |  DISEASES
56955  |  MEPE  |  1.039  |  DISEASES
8972  |  MGAM  |  4.234  |  DISEASES
10724  |  MGEA5  |  2.851  |  DISEASES
4496  |  MT1H  |  1.804  |  DISEASES
9788  |  MTSS1  |  1.187  |  DISEASES
10725  |  NFAT5  |  1.162  |  DISEASES
387129  |  NPSR1  |  1.268  |  DISEASES
4952  |  OCRL  |  5.133  |  DISEASES
27445  |  PCLO  |  1.139  |  DISEASES
5251  |  PHEX  |  3.6  |  DISEASES
795  |  S100G  |  1.353  |  DISEASES
84947  |  SERAC1  |  1.686  |  DISEASES
4990  |  SIX6  |  1.286  |  DISEASES
6557  |  SLC12A1  |  4.662  |  DISEASES
6559  |  SLC12A3  |  3.976  |  DISEASES
116085  |  SLC22A12  |  1.787  |  DISEASES
788  |  SLC25A20  |  1.199  |  DISEASES
10861  |  SLC26A1  |  3.766  |  DISEASES
1811  |  SLC26A3  |  2.583  |  DISEASES
65010  |  SLC26A6  |  1.516  |  DISEASES
6569  |  SLC34A1  |  3.878  |  DISEASES
142680  |  SLC34A3  |  4.873  |  DISEASES
153201  |  SLC36A2  |  2.116  |  DISEASES
6611  |  SMS  |  1.848  |  DISEASES
6696  |  SPP1  |  2.814  |  DISEASES
6708  |  SPTA1  |  2.419  |  DISEASES
6888  |  TALDO1  |  1.224  |  DISEASES
6905  |  TBCE  |  1.031  |  DISEASES
140803  |  TRPM6  |  2.229  |  DISEASES
55503  |  TRPV6  |  1.891  |  DISEASES
7421  |  VDR  |  1.481  |  DISEASES
79971  |  WLS  |  1.276  |  DISEASES
7498  |  XDH  |  1.143  |  DISEASES
Locus(Waiting for update.)
Disease ID 1230
Disease nephrocalcinosis
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:31)
HP:0002917  |  Low blood magnesium levels  |  23
HP:0002150  |  Hypercalcinuria  |  15
HP:0000083  |  Renal insufficiency  |  6
HP:0000787  |  Renal calculi  |  5
HP:0000093  |  Proteinuria  |  3
HP:0012210  |  Kidney malformation  |  3
HP:0000843  |  Hyperparathyroidism  |  2
HP:0000112  |  Nephropathy  |  2
HP:0003159  |  Hyperoxaluria  |  2
HP:0001947  |  Renal tubular acidosis  |  2
HP:0003072  |  Hypercalcemia  |  2
HP:0001919  |  Acute renal failure  |  2
HP:0001941  |  acidemia  |  2
HP:0012405  |  Hypocitraturia  |  1
HP:0008198  |  Congenital hypoparathyroidism  |  1
HP:0008221  |  Enlarged adrenal glands  |  1
HP:0002901  |  Hypocalcemia  |  1
HP:0006297  |  Hypoplasia of tooth enamel  |  1
HP:0002725  |  Systemic lupus erythematosus  |  1
HP:0000859  |  Mineralocorticoid excess  |  1
HP:0007971  |  Congenital lamellar cataracts  |  1
HP:0008200  |  Primary hyperparathyroidism  |  1
HP:0002960  |  Autoimmune condition  |  1
HP:0000705  |  Amelogenesis imperfecta  |  1
HP:0003774  |  End-stage renal failure  |  1
HP:0005567  |  Renal magnesium wasting  |  1
HP:0000518  |  Cataract  |  1
HP:0008341  |  Renal tubular acidosis, type I  |  1
HP:0000829  |  Hypoparathyroidism  |  1
HP:0008258  |  Congenital adrenal hyperplasia  |  1
HP:0003074  |  High blood glucose  |  1
Disease ID 1230
Disease nephrocalcinosis
Manually Symptom
UMLS  | Name(Total Manually Symptoms:15)
C2697310  |  sarcoidosis
C1963154  |  renal failure
C1840333  |  hdr syndrome
C1384514  |  primary aldosteronism
C0403447  |  chronic kidney disease
C0392525  |  nephrolithiasis
C0221002  |  primary hyperparathyroidism
C0151723  |  hypomagnesemia
C0042029  |  urinary tract infection
C0029434  |  osteogenesis imperfecta
C0022661  |  end-stage renal disease
C0022661  |  chronic renal failure
C0022660  |  acute renal failure
C0004775  |  bartter's syndrome
C0004775  |  bartter syndrome
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:8)
C0151723  |  hypomagnesemia  |  23
C0035078  |  renal failure  |  5
C0392525  |  nephrolithiasis  |  4
C1384514  |  primary aldosteronism  |  2
C0004775  |  bartter syndrome  |  2
C0022660  |  acute renal failure  |  1
C0221002  |  primary hyperparathyroidism  |  1
C0022661  |  chronic renal failure  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:0)
(Waiting for update.)
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 1230
Disease nephrocalcinosis
Case(Waiting for update.)