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encyclopedia of Rare Disease Annotation for Precision Medicine



   hutchinson-gilford progeria syndrome
  

Disease ID 306
Disease hutchinson-gilford progeria syndrome
Definition
An abnormal congenital condition, associated with defects in the LAMIN TYPE A gene, which is characterized by premature aging in children, where all the changes of cell senescence occur. It is manifested by premature greying; hair loss; hearing loss (DEAFNESS); cataracts (CATARACT); ARTHRITIS; OSTEOPOROSIS; DIABETES MELLITUS; atrophy of subcutaneous fat; skeletal hypoplasia; elevated urinary HYALURONIC ACID; and accelerated ATHEROSCLEROSIS. Many affected individuals develop malignant tumors, especially SARCOMA.
Synonym
hgps
hutchinson gilford progeria syndrome
hutchinson gilford syndrome
hutchinson-gilford disease
hutchinson-gilford progeria syndromes
hutchinson-gilford syndrome
hutchinson-gilford syndrome (disorder)
premature senility syndrome
progeria
progeria (disorder)
progeria [disease/finding]
progeria syndrome
progeria syndrome (disorder)
progeria syndrome (disorder) [ambiguous]
progeria syndrome, hutchinson-gilford
progeria syndromes, hutchinson-gilford
Orphanet
OMIM
DOID
UMLS
C0033300
MeSH
SNOMED-CT
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:8)
C0033300  |  progeria  |  2
C0003507  |  aortic valve stenosis  |  1
C0042373  |  vascular diseases  |  1
C0004153  |  atherosclerosis  |  1
C0043119  |  werner syndrome  |  1
C0403414  |  post-streptococcal glomerulonephritis  |  1
C0040188  |  tic disorders  |  1
C0042373  |  vascular disease  |  1
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:4)
83932  |  SPRTN  |  CTD_human
4000  |  LMNA  |  CLINVAR;CTD_human;GHR;ORPHANET;UNIPROT
10269  |  ZMPSTE24  |  CTD_human;ORPHANET
5831  |  PYCR1  |  CTD_human
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:111)
111  |  ADCY5  |  1.24  |  DISEASES
10555  |  AGPAT2  |  1.953  |  DISEASES
5832  |  ALDH18A1  |  2.024  |  DISEASES
270  |  AMPD1  |  2.923  |  DISEASES
23141  |  ANKLE2  |  2.698  |  DISEASES
23545  |  ATP6V0A2  |  1.306  |  DISEASES
2683  |  B4GALT1  |  1.382  |  DISEASES
8703  |  B4GALT3  |  2.887  |  DISEASES
632  |  BGLAP  |  1.101  |  DISEASES
650  |  BMP2  |  1.531  |  DISEASES
26580  |  BSCL2  |  2.338  |  DISEASES
1033  |  CDKN3  |  2.052  |  DISEASES
1041  |  CDSN  |  1.033  |  DISEASES
1063  |  CENPF  |  1.465  |  DISEASES
79827  |  CLMP  |  1.723  |  DISEASES
1325  |  CORT  |  1.751  |  DISEASES
1506  |  CTRL  |  1.515  |  DISEASES
1736  |  DKC1  |  1.021  |  DISEASES
3301  |  DNAJA1  |  1.529  |  DISEASES
1789  |  DNMT3B  |  1.306  |  DISEASES
84444  |  DOT1L  |  1.144  |  DISEASES
9521  |  EEF1E1  |  2.928  |  DISEASES
10919  |  EHMT2  |  1.016  |  DISEASES
23741  |  EID1  |  1.675  |  DISEASES
2010  |  EMD  |  4.604  |  DISEASES
2074  |  ERCC6  |  1.744  |  DISEASES
2224  |  FDPS  |  1.717  |  DISEASES
2280  |  FKBP1A  |  1.097  |  DISEASES
2591  |  GALNT3  |  1.612  |  DISEASES
85476  |  GFM1  |  1.422  |  DISEASES
728441  |  GGT2  |  3.147  |  DISEASES
92344  |  GORAB  |  2.179  |  DISEASES
2813  |  GP2  |  1.08  |  DISEASES
2873  |  GPS1  |  2.936  |  DISEASES
3014  |  H2AFX  |  2.628  |  DISEASES
8359  |  HIST1H4A  |  1.515  |  DISEASES
8366  |  HIST1H4B  |  1.515  |  DISEASES
8364  |  HIST1H4C  |  1.515  |  DISEASES
8360  |  HIST1H4D  |  1.514  |  DISEASES
8367  |  HIST1H4E  |  1.515  |  DISEASES
8361  |  HIST1H4F  |  1.515  |  DISEASES
8294  |  HIST1H4I  |  1.515  |  DISEASES
8363  |  HIST1H4J  |  1.515  |  DISEASES
8362  |  HIST1H4K  |  1.515  |  DISEASES
8368  |  HIST1H4L  |  1.515  |  DISEASES
8337  |  HIST2H2AA3  |  1.398  |  DISEASES
8338  |  HIST2H2AC  |  1.398  |  DISEASES
8349  |  HIST2H2BE  |  1.106  |  DISEASES
8370  |  HIST2H4A  |  1.515  |  DISEASES
554313  |  HIST2H4B  |  1.515  |  DISEASES
121504  |  HIST4H4  |  1.515  |  DISEASES
81502  |  HM13  |  1.614  |  DISEASES
3240  |  HP  |  1.064  |  DISEASES
60495  |  HPSE2  |  1.031  |  DISEASES
3351  |  HTR1B  |  1.536  |  DISEASES
23463  |  ICMT  |  3.564  |  DISEASES
8517  |  IKBKG  |  1.366  |  DISEASES
3621  |  ING1  |  2.35  |  DISEASES
10524  |  KAT5  |  1.105  |  DISEASES
84148  |  KAT8  |  1.335  |  DISEASES
9365  |  KL  |  2.05  |  DISEASES
3836  |  KPNA1  |  1.491  |  DISEASES
3838  |  KPNA2  |  1.437  |  DISEASES
4000  |  LMNA  |  7.779  |  DISEASES
84823  |  LMNB2  |  4.087  |  DISEASES
57591  |  MKL1  |  1.961  |  DISEASES
2475  |  MTOR  |  1.741  |  DISEASES
93649  |  MYOCD  |  1.106  |  DISEASES
23310  |  NCAPD3  |  2.579  |  DISEASES
79050  |  NOC4L  |  4.159  |  DISEASES
7703  |  PCGF2  |  2.921  |  DISEASES
5116  |  PCNT  |  1.14  |  DISEASES
5154  |  PDGFA  |  1.593  |  DISEASES
267004  |  PGBD3  |  4.072  |  DISEASES
5229  |  PGGT1B  |  1.804  |  DISEASES
87178  |  PNPT1  |  2.105  |  DISEASES
5420  |  PODXL  |  1.87  |  DISEASES
5424  |  POLD1  |  1.453  |  DISEASES
5549  |  PRELP  |  1.957  |  DISEASES
284119  |  PTRF  |  1.453  |  DISEASES
5831  |  PYCR1  |  2.206  |  DISEASES
5902  |  RANBP1  |  2.023  |  DISEASES
5905  |  RANGAP1  |  2.017  |  DISEASES
5932  |  RBBP8  |  1.37  |  DISEASES
146713  |  RBFOX3  |  1.027  |  DISEASES
1104  |  RCC1  |  1.442  |  DISEASES
5981  |  RFC1  |  3.24  |  DISEASES
64221  |  ROBO3  |  1.72  |  DISEASES
6234  |  RPS28  |  2.525  |  DISEASES
5269  |  SERPINB6  |  1.14  |  DISEASES
6418  |  SET  |  1.391  |  DISEASES
7536  |  SF1  |  3.203  |  DISEASES
51548  |  SIRT6  |  1.684  |  DISEASES
54558  |  SPATA6  |  2.441  |  DISEASES
6430  |  SRSF5  |  1.999  |  DISEASES
23353  |  SUN1  |  4.705  |  DISEASES
25777  |  SUN2  |  3.65  |  DISEASES
6839  |  SUV39H1  |  2.796  |  DISEASES
23224  |  SYNE2  |  2.808  |  DISEASES
7088  |  TLE1  |  1.257  |  DISEASES
7158  |  TP53BP1  |  2.875  |  DISEASES
7175  |  TPR  |  2.805  |  DISEASES
1787  |  TRDMT1  |  2.107  |  DISEASES
51393  |  TRPV2  |  1.174  |  DISEASES
117581  |  TWIST2  |  1.36  |  DISEASES
7329  |  UBE2I  |  2.631  |  DISEASES
56897  |  WRNIP1  |  1.831  |  DISEASES
7507  |  XPA  |  3.592  |  DISEASES
7520  |  XRCC5  |  1.036  |  DISEASES
10269  |  ZMPSTE24  |  7.244  |  DISEASES
7549  |  ZNF2  |  2.827  |  DISEASES
Locus
Symbol | Locus(Total Locus:2)
LMNA  |  1q22
ZMPSTE24  |  1p34.2
Disease ID 306
Disease hutchinson-gilford progeria syndrome
Integrated Phenotype
HPO | Name(Total Integrated Phenotypes:103)
HP:0000894  |  Short clavicles
HP:0004322  |  Short stature
HP:0004931  |  Arteriosclerosis of small cerebral arteries
HP:0000347  |  Micrognathia
HP:0008151  |  Prolonged prothrombin time
HP:0001894  |  Thrombocytosis
HP:0010665  |  Bilateral coxa valga
HP:0001658  |  Myocardial infarction
HP:0001657  |  Prolonged QT interval
HP:0001508  |  Failure to thrive
HP:0004417  |  Intermittent claudication
HP:0005461  |  Craniofacial disproportion
HP:0002753  |  Thin bony cortex
HP:0000789  |  Infertility
HP:0001596  |  Alopecia
HP:0004492  |  Widely patent fontanelles and sutures
HP:0002692  |  Hypoplastic facial bones
HP:0006224  |  Tapering pointed ends of distal finger phalanges
HP:0011703  |  Sinus tachycardia
HP:0000520  |  Proptosis
HP:0001006  |  Hypotrichosis
HP:0000347  |  Hypoplasia of mandible
HP:0007485  |  Absence of subcutaneous fat
HP:0002164  |  Nail dysplasia
HP:0000233  |  Thin vermilion border
HP:0001084  |  Corneal arcus
HP:0002557  |  Hypoplastic nipples
HP:0000883  |  Thin ribs
HP:0000668  |  Hypodontia
HP:0000822  |  Hypertension
HP:0000684  |  Delayed eruption of teeth
HP:0002828  |  Multiple joint contractures
HP:0000540  |  Hypermetropia
HP:0001681  |  Angina pectoris
HP:0004325  |  Decreased body weight
HP:0002905  |  Hyperphosphatemia
HP:0001712  |  Left ventricular hypertrophy
HP:0008230  |  Decreased testosterone in males
HP:0002797  |  Increased bone resorption
HP:0001043  |  Prominent scalp veins
HP:0003355  |  Aminoaciduria
HP:0001397  |  Hepatic steatosis
HP:0001249  |  Intellectual disability
HP:0001596  |  Hair loss
HP:0003300  |  Ovoid vertebral bodies
HP:0001097  |  Keratoconjunctivitis sicca
HP:0001510  |  Growth deficiency
HP:0008214  |  Decreased serum estradiol
HP:0000956  |  Acanthosis nigricans
HP:0002216  |  Premature graying of hair
HP:0000160  |  Narrow mouth
HP:0000535  |  Sparse eyebrow
HP:0011800  |  Midface, flat
HP:0000961  |  Cyanosis
HP:0011356  |  Regional abnormality of skin
HP:0003115  |  Abnormal EKG
HP:0009906  |  Aplasia/Hypoplasia of the earlobes
HP:0000407  |  Sensorineural hearing impairment
HP:0006660  |  Aplastic clavicles
HP:0000966  |  Hypohidrosis
HP:0000939  |  Osteoporosis
HP:0000726  |  Dementia
HP:0002758  |  Osteoarthritis
HP:0002808  |  Kyphosis
HP:0000823  |  Delayed puberty
HP:0003016  |  Metaphyseal widening
HP:0002326  |  Transient ischemic attack
HP:0002827  |  Hip dislocation
HP:0000765  |  Abnormality of the thorax
HP:0011220  |  Prominent forehead
HP:0001611  |  Nasal speech
HP:0001297  |  Stroke
HP:0040160  |  Generalized osteoporosis
HP:0000518  |  Cataract
HP:0004416  |  Precocious atherosclerosis
HP:0005181  |  Premature coronary artery disease
HP:0007427  |  Reticulated skin pigmentation
HP:0000561  |  Absent eyelashes
HP:0100671  |  Abnormal trabecular bone morphology
HP:0000678  |  Dental crowding
HP:0001635  |  Congestive heart failure
HP:0000963  |  Thin skin
HP:0003335  |  Low gonadotropins (secondary hypogonadism)
HP:0100578  |  Lipoatrophy
HP:0002155  |  Hypertriglyceridemia
HP:0040113  |  Old-aged sensorineural hearing impairment
HP:0000877  |  Insulin-resistant diabetes mellitus at puberty
HP:0001510  |  Growth delay
HP:0002664  |  Neoplasm
HP:0000842  |  Hyperinsulinemia
HP:0000938  |  Osteopenia
HP:0100546  |  Carotid artery stenosis
HP:0008070  |  Sparse hair
HP:0011832  |  Narrow nasal tip
HP:0008197  |  Absence of pubertal development
HP:0000272  |  Depressed malar region
HP:0001816  |  Thin nail
HP:0001387  |  Joint stiffness
HP:0100679  |  Lack of skin elasticity
HP:0000400  |  Macrotia
HP:0001620  |  High pitched voice
HP:0000320  |  Bird-like facies
HP:0002136  |  Broad-based gait
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:13)
Disease ID 306
Disease hutchinson-gilford progeria syndrome
Manually Symptom
UMLS  | Name(Total Manually Symptoms:2)
C0392674  |  exhaustion
C0004153  |  atherosclerosis
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:1)
C0004153  |  atherosclerosis  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:44)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs113436208NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138758GA,C
rs113860699NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138759TA,C,G
rs11575937164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156136985GA,T
rs121913049202212512072ERCC4umls:C0033300BeFreeIn an attempt to determine how mutations in XPF can lead to such diverse symptoms, the effects of a progeria-causing mutation (XPF(R153P)) were compared to an XP-causing mutation (XPF(R799W)) in vitro and in vivo.0.0008143262010ERCC41613947991CT
rs121913050202212512072ERCC4umls:C0033300BeFreeIn an attempt to determine how mutations in XPF can lead to such diverse symptoms, the effects of a progeria-causing mutation (XPF(R153P)) were compared to an XP-causing mutation (XPF(R799W)) in vitro and in vivo.0.0008143262010ERCC4;LOC1053710931613926630GA,C
rs150840924NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156136359CT
rs267607545167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156136121GA,T
rs267607545164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156136121GA,T
rs267607547NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156137664TC
rs267607620248616484000LMNAumls:C0033300BeFreep.Pro4Arg mutation in LMNA gene: a new atypical progeria phenotype without metabolism abnormalities.0.6271653212014LMNA1156114929CG
rs28928902127684434000LMNAumls:C0033300UNIPROTLMNA is mutated in Hutchinson-Gilford progeria (MIM 176670) but not in Wiedemann-Rautenstrauch progeroid syndrome (MIM 264090).0.6271653212003LMNA1156136951CG,T
rs28928902167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156136951CG,T
rs28933091164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156134474CA,G
rs57207746167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156134860GA
rs57318642194328334000LMNAumls:C0033300BeFreeHomozygous LMNA mutation R527C in atypical Hutchinson-Gilford progeria syndrome: evidence for autosomal recessive inheritance.0.6271653212009LMNA1156137203CT
rs57318642NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156137203CT
rs57318642167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156137203CT
rs57520892164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156137204GA,C
rs57920071219932186720SREBF1umls:C0033300BeFreeIn addition, the tail regions of A-type lamin variants that occur in Dunnigan-type familial partial lipodystrophy of (R482W) and Hutchison Gilford progeria syndrome (∆607-656) bind to the SREBP1 polypeptide in vitro, and the corresponding FLAG-tagged full-length lamin variants co-immunoprecipitate the SREBP1 polypeptide in cells.0.0002714422011LMNA1156136984CT
rs57920071219932184000LMNAumls:C0033300BeFreeIn addition, the tail regions of A-type lamin variants that occur in Dunnigan-type familial partial lipodystrophy of (R482W) and Hutchison Gilford progeria syndrome (∆607-656) bind to the SREBP1 polypeptide in vitro, and the corresponding FLAG-tagged full-length lamin variants co-immunoprecipitate the SREBP1 polypeptide in cells.0.6271653212011LMNA1156136984CT
rs58596362NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138613CT
rs58596362252167524000LMNAumls:C0033300BeFreeA silent point mutation at position 1824 (C1824T) of the LMNA gene, generating a truncated form of lamin A (progerin), has been shown to be the cause of most cases of HGPS.0.6271653212014LMNA1156138613CT
rs58596362228937094000LMNAumls:C0033300BeFreeIn this study, we describe the development of a tissue-specific mouse model that overexpresses the most common HGPS mutation (LMNA, c.1824C>T, p.G608G) in osteoblasts.0.6271653212012LMNA1156138613CT
rs58596362220790584000LMNAumls:C0033300BeFreeThe most prevalent mutation in Hutchinson-Gilford syndrome is C1824T, which activates a cryptic splice donor site to produce an abnormal lamin A protein.0.6271653212012LMNA1156138613CT
rs58912633156225324000LMNAumls:C0033300UNIPROTp.S143F mutation in lamin A/C: a new phenotype combining myopathy and progeria.0.6271653212005LMNA1156130688CT
rs58912633156225324000LMNAumls:C0033300BeFreep.S143F mutation in lamin A/C: a new phenotype combining myopathy and progeria.0.6271653212005LMNA1156130688CT
rs58912633178816564000LMNAumls:C0033300BeFreeThe S143F lamin A/C point mutation causes a phenotype combining features of myopathy and progeria.0.6271653212007LMNA1156130688CT
rs58912633257386444000LMNAumls:C0033300BeFreeWe have carried out an analysis of the structural and functional consequences of progeria-associated nuclear blebs in dermal fibroblasts from a progeria patient carrying a rare point mutation p.S143F (C428T) in lamin A/C.0.6271653212015LMNA1156130688CT
rs59267781NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138657CG
rs59653062164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156136076TA
rs59886214NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138610GA
rs60310264219411064000LMNAumls:C0033300BeFreeAmphibian oocyte nuclei expressing lamin A with the progeria mutation E145K exhibit an increased elastic modulus.0.6271653212011LMNA1156130693GA
rs60310264127149724000LMNAumls:C0033300UNIPROTRecurrent de novo point mutations in lamin A cause Hutchinson-Gilford progeria syndrome.0.6271653212003LMNA1156130693GA
rs60310264NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156130693GA
rs60458016164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156136036GA,T
rs60652225129274314000LMNAumls:C0033300UNIPROTLMNA mutations in atypical Werner's syndrome.0.6271653212003LMNA1156130679TC,G
rs60934003167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156137213TC
rs61064130NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138611GA
rs61282106164403044000LMNAumls:C0033300BeFreeThe mutant constructs used included the laminopathy-inducing lamin A rod domain mutants N195K, E358K, M371K, R386K, the tail domain mutants G465D, R482L, and R527P, and the Hutchinson-Gilford progeria syndrome-causing deletion mutant, progerin (LaA delta50).0.6271653212006LMNA1156136934GA
rs61616775167723344000LMNAumls:C0033300BeFreeThe inner nuclear membrane protein emerin was mislocalised upon expression of the muscular dystrophy mutants G232E, Q294P or R386K, which aberrantly assembled into nuclear aggregates, or upon expression of mutants causing progeria syndromes in vivo (lamin A del50, R471C, R527C and L530P).0.6271653212006LMNA1156135257AC
rs797044485NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156134832GA
rs797044486NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138560TA
rs797044487NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138757GA
rs797044488NA4000LMNAumls:C0033300CLINVARNA0.627165321NALMNA1156138762GA,C
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:29)
HP ID HP Name MP ID MP Name Annotation
HP:0040160Generalized osteoporosisMP:0000066osteoporosisreduction in bone mass or atrophy of skeletal tissue; may lead to skeletal fragility
HP:0001508Failure to thriveMP:0013294prenatal lethality prior to heart atrial septationdeath prior to the completion of heart atrial septation (Mus: E14.5-15.5)
HP:0002753Thin bony cortexMP:0009969abnormal cerebral cortex pyramidal cell morphologyany structural anomaly of the projection neurons in the pyramidal cell layer of the cerebral cortex
HP:0000160Narrow mouthMP:0000452abnormal mouth morphologyany structural anomaly of the oral cavity
HP:0008070Sparse hairMP:0010202focal dorsal hair lossfocal hair loss on the dorsal area of a rodent resulting in dorsal skin visible in a patch where hair loss occurs
HP:0001387Joint stiffnessMP:0003098decreased tendon stiffnessreduced ability of tendon to maintain tensile strength and load
HP:0008230Decreased testosterone in malesMP:0002780decreased circulating testosterone levelreduction in the blood concentration of a potent androgen that promotes development of male secondary sex characteristics and the development of spermatozoa and may regulate sexual desire and help maintain bone and muscle health in both males and females
HP:0007427Reticulated skin pigmentationMP:0002060abnormal skin morphologyany structural anomaly of the membranous protective covering of the body
HP:0011800Hypoplasia of midfaceMP:0020010decreased bone mineral density of femurreduction in the quatitative measurment value of mineral content of bone in the long bone of the thigh
HP:0000963Thin skinMP:0010678abnormal skin adnexa morphologyany structural anomaly of the tissue or structures associated with or embedded in the skin such as hair and hair follicles, sweat glands, sebaceous glands and claws or nails
HP:0100671Abnormal trabecular bone morphologyMP:0010878increased trabecular bone volumeincrease in the amount of space occupied by trabecular bone tissue in the skeleton
HP:0040113Old-aged sensorineural hearing impairmentMP:0006325impaired hearingreduced ability to perceive auditory stimuli
HP:0000407Sensorineural hearing impairmentMP:0006330syndromic hearing impairmenthearing impairment that is usually associated with malformations of the external ear and other inherited signs and symptoms
HP:0000765Abnormality of the thoraxMP:0013620increased internal diameter of femurincreased cross-sectional distance that extends from one lateral edge of the femur long bone marrow cavity, through its center and to the opposite lateral edge of the bone marrow cavity through the mid point of the femur
HP:0000883Thin ribsMP:0004674thin ribsa more slender appearance of the bones forming the bony wall of the chest
HP:0100679Lack of skin elasticityMP:0010919increased number of pulmonary neuroendocrine bodiesgreater number of the corpuscular, organoid structures composed of PNECs, found as distinctive innervated clusters only within intrapulmonary airways, where they appear concentrated at airway branch points; NEBs reach from the basement membrane to the air
HP:0001712Left ventricular hypertrophyMP:0010402ventricular septal defectabnormal communications between the two lower chambers of the heart, including such defects in the perimembranous, inlet, outlet (infundibular), central muscular, marginal muscular, or apical muscular regions
HP:0001657Prolonged QT intervalMP:0003900shortened QT intervaldecrease in the length of time required for ventricular depolarization and repolarization to occur, usually as a result of increased repolarization time, and is measured from the beginning of the QRS complex to the end of the T wave
HP:0009906Aplasia/Hypoplasia of the earlobesMP:0012167abnormal epigenetic regulation of gene expressionany anomaly in the process that modulates the frequency, rate or extent of gene expression, in which the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA
HP:0000684Delayed eruption of teethMP:0020010decreased bone mineral density of femurreduction in the quatitative measurment value of mineral content of bone in the long bone of the thigh
HP:0001635Congestive heart failureMP:0011925abnormal heart echocardiography featureany anomaly in echocardiographic representation of systolic and diastolic function, ventricular compliance, valvular function, or interventricular septum features
HP:0002136Broad-based gaitMP:0001406abnormal gaitabnormal pattern of movement of the limbs of animals, characterized by elements of progression, stability, speed and length over the ground
HP:0002216Premature graying of hairMP:0009657failure of chorioallantoic fusionfailure to initiate and/or complete the formation of a highly vascularized extra-embryonic fetal membrane by fusion of the chorion and allantois
HP:0007485Absence of subcutaneous fatMP:0009536abnormal interstitial cell of Cajal morphologyany structural anomaly in the type of cell found in the gastrointestinal tract and serving as a pacemaker that triggers gut contraction; ICCs mediate inputs from the enteric nervous system to smooth muscle cells and are thought to be the cells from which
HP:0008151Prolonged prothrombin timeMP:0005606increased bleeding timegreater than the normal duration of blood flow after skin puncture; indicative of platelet and capillary function
HP:0004325Decreased body weightMP:0010239decreased skeletal muscle weightless than average skeletal muscle weight
HP:0008197Absence of pubertal developmentMP:0013351abnormal Rathke's pouch developmentany anomaly in the formation of the pouch of ectoderm which grows out from the upper surface of the embryonic stomodeum and gives rise to the anterior and intermediate lobes of the pituitary gland
HP:0003300Ovoid vertebral bodiesMP:0004704short vertebral columndecreased rostral-caudal length of the complete structure forming the rostral-caudal axis of the skeleton formed from the alternating segments of vertebra and intervertebral discs which support the spinal cord
HP:0002692Hypoplastic facial bonesMP:0004686decreased length of long bonesreduced end-to-end length of the several elongated bones of the extremities
Mapped by homologous gene(Total Items:95)
HP ID HP Name MP ID MP Name Annotation
HP:0003115Abnormal EKGMP:0013504increased embryonic tissue cell apoptosisincrease in the timing or the number of cells in embryonic tissue undergoing programmed cell death
HP:0002758OsteoarthritisMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000320Bird-like faciesMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002557Hypoplastic nipplesMP:0013785abnormal mammary gland bud morphologyany structural anomaly of the morphologically distinct bulb of epithelial cells formed once each mammary placode expands and invaginates into the underlying mesenchyme; in mouse embryos at E12.5, each epithelial bud with its contiguous mesenchyme is eleva
HP:0001712Left ventricular hypertrophyMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002216Premature graying of hairMP:0014164abnormal ciliary process morphology any structural anomaly of any of the pigmented processes that radiate from the ciliary muscle and give attachments to ligaments supporting the lens of the eye; these processes increase in thickness as they advance from the orbiculus ciliaris to the exter
HP:0000347MicrognathiaMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0100679Lack of skin elasticityMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001508Failure to thriveMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0000518CataractMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0003355AminoaciduriaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001297StrokeMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0000966HypohidrosisMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000883Thin ribsMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000160Narrow mouthMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0007427Reticulated skin pigmentationMP:0013501increased fibroblast apoptosisincrease in the timing or the number of fibroblast cells undergoing programmed cell death
HP:0100578LipoatrophyMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000823Delayed pubertyMP:0020087increased susceptibility to non-insulin-dependent diabetesincreased likelihood to develop non-insulin-dependent diabetes
HP:0002753Thin bony cortexMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0011356Regional abnormality of skinMP:0012307impaired spatial learningimpaired ability to ascertain or acquire spatial location information in order to improve navigation or other behavior using such location cues
HP:0011220Prominent foreheadMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0000684Delayed eruption of teethMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0007485Absence of subcutaneous fatMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001084Corneal arcusMP:0011108embryonic lethality during organogenesis, incomplete penetrancethe appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between embryo turning and the completion of organogenesis (Mus: E9-9.5 to less than E14)
HP:0001635Congestive heart failureMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0000877Insulin-resistant diabetes mellitus at pubertyMP:0014169decreased brown adipose tissue massdecreased physical bulk or volume of brown adipose tissue
HP:0000272Malar flatteningMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000400MacrotiaMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0008070Sparse hairMP:0014179abnormal blood-retinal barrier functionanomaly in the function of the part of the blood-ocular barrier that consists of cells that are joined tightly together to prevent certain substances from entering the tissue of the retina; the BRB consists of non-fenestrated capillaries of the retinal ci
HP:0002808KyphosisMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0001681Angina pectorisMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001596AlopeciaMP:0020220decreased tear productiondecreased production of the amount of fluid produced in the eye
HP:0002664NeoplasmMP:0020154impaired humoral immune responseimpaired response of the immune system that mediates secreted antibodies produced in B cells
HP:0000789InfertilityMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0001006HypotrichosisMP:0014082decreased small intestinal villus heightdecreased height of the tiny hair-like projections which protrude from the inside of the small intestine and contain blood vessels that capture digested nutrients that are absorbed through the intestinal wall; usually accompanied by crypt elongation or hy
HP:0002164Nail dysplasiaMP:0014175abnormal ciliary epithelium morphologyany structural anomaly of the double layer lining the inner surfaces of the ciliary processes and the pars plana (i.e. the posterior portion of the ciliary body, aka orbicularis ciliari); the outer layer is the pigmented epithelium, which is composed of l
HP:0004416Precocious atherosclerosisMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002905HyperphosphatemiaMP:0020214susceptible to malignant hyperthermiaincreased susceptibility to hyperthermia triggered by exposure to certain drugs used for general anesthesia, specifically the volatile anesthetic agents and the neuromuscular blocking agent, succinylcholine
HP:0000561Absent eyelashesMP:0013696increased granulocyte monocyte progenitor cell numberincrease in the number of a hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages; these cells are CD123-positive, and do not express Gata1 or Gata2 but do express C/EBPa, and Pu.1
HP:0002827Hip dislocationMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0004325Decreased body weightMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0100671Abnormal trabecular bone morphologyMP:0010967increased compact bone areaincrease in the total amount of cross-sectional area of compact bone tissue
HP:0003300Ovoid vertebral bodiesMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0008151Prolonged prothrombin timeMP:0020215impaired blood coagulationimpaired ability of the blood to clot
HP:0003335Low gonadotropins (secondary hypogonadism)MP:0013603abnormal fetal Leydig cell differentiationatypical formation of or inability to produce the first or fetal population of Leydig cells (FLCs); in mice, FLCs arise in the testicular interstitium between E12.5 and E13.0, approximately 1 day after the appearance of Sertoli cells; Sertoli cells trigge
HP:0005181Premature coronary artery diseaseMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000233Thin vermilion borderMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001611Nasal speechMP:0020040decreased bone ossificationdecrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0001387Joint stiffnessMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001894ThrombocytosisMP:0020039increased bone ossificationincrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0000961CyanosisMP:0013781abnormal mammary gland luminal epithelium morphologyany structural anomaly of the inner cell layer of the mammary epithelium bilayer that lines the luminal surface of mammary gland ducts and alveoli; luminal cells have only limited contact with the underlying basement membrane and surrounding connective ti
HP:0001816Thin nailMP:0012720elongated neckincreased length of the neck
HP:0006224Tapering pointed ends of distal finger phalangesMP:0009142decreased prepulse inhibitiondecrease in the ability of a relatively mild stimulus to suppress the response to a strong, startle-eliciting stimulus
HP:0002326Transient ischemic attackMP:0013696increased granulocyte monocyte progenitor cell numberincrease in the number of a hematopoietic progenitor cell that is committed to the granulocyte and monocyte lineages; these cells are CD123-positive, and do not express Gata1 or Gata2 but do express C/EBPa, and Pu.1
HP:0006660Aplastic claviclesMP:0020010decreased bone mineral density of femurreduction in the quatitative measurment value of mineral content of bone in the long bone of the thigh
HP:0009906Aplasia/Hypoplasia of the earlobesMP:0020039increased bone ossificationincrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0000540HypermetropiaMP:0020157abnormal behavioral response to alcoholany anomaly in the behavioral response induced by alcohol, such as induced hyperactivity or stereotypic behavior
HP:0001620High pitched voiceMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0001097Keratoconjunctivitis siccaMP:0013378increased sebocyte numbergreater than expected number of the highly specialized, sebum-producing epithelial cells of the sebaceous glands that release their content by rupture of the cell membrane and cellular degradation
HP:0000407Sensorineural hearing impairmentMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0002828Multiple joint contracturesMP:0013293embryonic lethality prior to tooth bud stagedeath prior to the appearance of tooth buds (Mus: E12-E12.5)
HP:0000894Short claviclesMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0000939OsteoporosisMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000938OsteopeniaMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000765Abnormality of the thoraxMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0008197Absence of pubertal developmentMP:0014198absent pituitary infundibular stalkabsence of the apical portion of the tubular structure extending from the hypothalamus to the posterior lobe of the pituitary gland
HP:0000520ProptosisMP:0020321increased vascular endothelial cell apoptosisincrease in the timing or the number of vascular endothelial cells undergoing programmed cell death
HP:0001249Intellectual disabilityMP:0020316decreased vascular endothelial cell proliferationdecrease in the expansion rate of any vascular endothelial cell population by cell division
HP:0040160Generalized osteoporosisMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0000822HypertensionMP:0020216decreased circulating complement protein levelless than normal levels of the serum proteins that act sequentially to allow for the direct killing of microbes, the disposal of immune complexes, and the regulation of other immune processes
HP:0002136Broad-based gaitMP:0013787photophobia abnormal aversion or avoidance behavior in response to light; photophobia is symptom of abnormal intolerance to visual perception of light; as a medical symptom, photophobia is not a morbid fear or phobia, but an experience of discomfort or pain to the e
HP:0003016Metaphyseal wideningMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0002692Hypoplastic facial bonesMP:0010933decreased trabecular bone connectivity densityreduction in the extent of attachments between trabeculae; it may be expressed in ratios of nodes to free ends, trabecular bone pattern factor, and related measures
HP:0004417Intermittent claudicationMP:0020039increased bone ossificationincrease in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance
HP:0001657Prolonged QT intervalMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0008230Decreased testosterone in malesMP:0013737small bulbourethral glandreduced size of either of the small paired racemose (compound tubulo-alveolar) glands below the apex of the prostate in males, located posterolateral to the membranous portion of the urethra at the base of the penis, between the two layers of the fascia o
HP:0004322Short statureMP:3000003abnormal Ebner's gland morphologyany structural anomaly of the serous salivary glands which reside adjacent to the moats surrounding the circumvallate and foliate papillae just anterior to the posterior third of the tongue, anterior to the terminal sulcus; these exocrine glands secrete l
HP:0000535Sparse eyebrowMP:0014185cerebellum atrophyacquired diminution of the size of the cerebellum associated with wasting as from death and reabsorption of cells, diminished cellular proliferation, decreased cellular volume, pressure, ischemia, malnutrition, reduced function or malfunction, or hormonal
HP:0002797OsteolysisMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001510Growth delayMP:0020169increased thyroid gland weighthigher than average weight of the thyroid gland
HP:0000956Acanthosis nigricansMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0040113Old-aged sensorineural hearing impairmentMP:0014155absent olfactory epitheliumabsence of the epithelial cells that line the interior of the nose
HP:0000963Thin skinMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0002155HypertriglyceridemiaMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0010665Bilateral coxa valgaMP:0011143thick lung-associated mesenchymeincreased thickness of the mesenchymal cell layer due to delay or failure of the mesenchymal compartment to thin down during the late stages of embryonic lung development
HP:0001043Prominent scalp veinsMP:0013258abnormal extracellular matrix morphologyany structural anomaly of the structure lying external to one or more cells, which provides structural support for cells or tissues; in mammals, the extracellular matrix is completely external to the cell
HP:0001658Myocardial infarctionMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0001397Hepatic steatosisMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0000726DementiaMP:0020329decreased capillary densityreduction in the number of capillaries in a given cross-sectional area of a tissue
HP:0000842HyperinsulinemiaMP:0020234decreased basal metabolismdecrease in heat production of an organism at the lowest level of cell chemistry in an inactive, awake, and fasting state
HP:0000678Dental crowdingMP:0020309increased creatine kinase activityincreased ability of to catalyze the reaction: ATP + creatine = N-phosphocreatine + ADP + 2 H(+).
HP:0004492Widely patent fontanelles and suturesMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
HP:0011800Hypoplasia of midfaceMP:0020254decreased collagen leveldecreased level of the main structural protein of the various connective tissues in animals
HP:0004931Arteriosclerosis of small cerebral arteriesMP:0010875increased bone volumeincreased amount of space occupied by bone tissue in the skeleton
HP:0000668HypodontiaMP:0020137decreased bone mineralizationdecrease in the rate at which minerals are deposited into bone
Disease ID 306
Disease hutchinson-gilford progeria syndrome
Case(Waiting for update.)