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encyclopedia of Rare Disease Annotation for Precision Medicine



   chlamydia
  

Disease ID 900
Disease chlamydia
Definition
A genus of the family CHLAMYDIACEAE whose species cause a variety of diseases in vertebrates including humans, mice, and swine. Chlamydia species are gram-negative and produce glycogen. The type species is CHLAMYDIA TRACHOMATIS.
Synonym
bedsonia
chlamydia (organism)
chlamydia bacteria
chlamydia jones et al. 1945 (approved lists 1980) emend. everett et al. 1999
chlamydia species
chlamydia, nos
chlamydiae
chlamydias
genus chlamydia
genus chlamydia (organism)
miyagawanella
rakeia
rickettsiaformis
DOID
UMLS
C0008148
MeSH
Comorbidity
UMLS | Disease | Sentences' Count(Total Sentences:89)
C0021359  |  infertility  |  8
C0024299  |  lymphoma  |  4
C0242172  |  pelvic inflammatory disease  |  4
C0085435  |  reactive arthritis  |  4
C0009763  |  conjunctivitis  |  4
C0041976  |  urethritis  |  3
C0004153  |  atherosclerosis  |  3
C0033581  |  prostatitis  |  3
C0014534  |  epididymitis  |  3
C0021359  |  infertile  |  3
C0003864  |  arthritis  |  3
C0026934  |  mycoplasma  |  3
C0027051  |  myocardial infarction  |  2
C0029291  |  psittacosis  |  2
C0022573  |  keratoconjunctivitis  |  2
C0006840  |  candidiasis  |  2
C0040592  |  trachoma  |  2
C0032987  |  ectopic pregnancy  |  2
C0008698  |  maxillary sinusitis  |  2
C0027051  |  myocardial infarct  |  2
C0018081  |  gonorrhoea  |  2
C0042384  |  vasculitis  |  2
C0004096  |  asthma  |  2
C0242172  |  pelvic inflammatory disease (pid)  |  2
C0000786  |  miscarriage  |  2
C0024437  |  age-related macular degeneration  |  2
C0037199  |  sinusitis  |  2
C0024437  |  macular degeneration  |  2
C0155804  |  acute maxillary sinusitis  |  1
C0010068  |  coronary artery disease  |  1
C0024894  |  mastitis  |  1
C0040558  |  toxoplasmosis  |  1
C0155626  |  acute myocardial infarction  |  1
C0948265  |  metabolic syndrome  |  1
C0035078  |  renal failure  |  1
C0155686  |  acute myocarditis  |  1
C0027813  |  neuritis  |  1
C0022660  |  acute renal failure  |  1
C0442874  |  neuropathy  |  1
C0014179  |  uterine infection  |  1
C0000786  |  spontaneous abortion  |  1
C0024286  |  lymphogranuloma venereum  |  1
C0014742  |  erythema multiforme  |  1
C0010034  |  corneal diseases  |  1
C0011991  |  diarrhea  |  1
C0085109  |  corneal neovascularization  |  1
C0024115  |  pulmonary disease  |  1
C0008148  |  chlamydia  |  1
C0026769  |  multiple sclerosis  |  1
C0025289  |  meningitis  |  1
C0032285  |  pneumonia  |  1
C0038325  |  erythema exsudativum multiforme  |  1
C0227791  |  vaginal discharge  |  1
C0085166  |  bacterial vaginosis  |  1
C0020443  |  hypercholesterolemia  |  1
C0029134  |  optic neuritis  |  1
C0007860  |  cervicitis  |  1
C0028432  |  nasal disease  |  1
C0007222  |  cardiovascular disease  |  1
C0035242  |  respiratory tract diseases  |  1
C0340238  |  bronchial infection  |  1
C0006277  |  bronchitis  |  1
C0035204  |  respiratory diseases  |  1
C0027059  |  myocarditis  |  1
C0021053  |  immune disorder  |  1
C0021364  |  male infertility  |  1
C0242379  |  lung cancer  |  1
C0750114  |  vaginosis  |  1
C0042373  |  vascular disease  |  1
C0028960  |  oligozoospermia  |  1
C0024299  |  lymphomas  |  1
C0748023  |  bacterial prostatitis  |  1
C0006267  |  bronchiectasis  |  1
C0040921  |  trichomoniasis  |  1
C0010034  |  corneal disease  |  1
C0456909  |  blindness  |  1
C0039128  |  syphilis  |  1
C0032914  |  preeclampsia  |  1
C0014175  |  endometriosis  |  1
C0013537  |  eclampsia  |  1
C0024115  |  pulmonary diseases  |  1
C0035204  |  respiratory disease  |  1
C0033575  |  prostatic disease  |  1
C0033246  |  proctitis  |  1
C0024115  |  lung diseases  |  1
C0024115  |  lung disease  |  1
C0018081  |  gonorrhea  |  1
C0242647  |  malt lymphoma  |  1
C0021053  |  immune disorders  |  1
Curated Gene(Waiting for update.)
Inferring Gene
Entrez_id | Symbol | Resource(Total Genes:6)
929  |  CD14  |  CIPHER
3119  |  HLA-DQB1  |  CIPHER
3123  |  HLA-DRB1  |  CIPHER
3586  |  IL10  |  CIPHER
7097  |  TLR2  |  CIPHER
7099  |  TLR4  |  CIPHER
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:67)
226  |  ALDOA  |  1.235  |  DISEASES
10018  |  BCL2L11  |  1.248  |  DISEASES
90427  |  BMF  |  1.529  |  DISEASES
680  |  BRS3  |  1.086  |  DISEASES
720  |  C4A  |  1.154  |  DISEASES
834  |  CASP1  |  2.461  |  DISEASES
912  |  CD1D  |  1.097  |  DISEASES
916  |  CD3E  |  1.324  |  DISEASES
958  |  CD40  |  1.583  |  DISEASES
959  |  CD40LG  |  4.436  |  DISEASES
9308  |  CD83  |  1.542  |  DISEASES
942  |  CD86  |  2.182  |  DISEASES
85301  |  COL27A1  |  2.89  |  DISEASES
1369  |  CPN1  |  3.247  |  DISEASES
8804  |  CREG1  |  1.378  |  DISEASES
10675  |  CSPG5  |  2.467  |  DISEASES
2920  |  CXCL2  |  1.496  |  DISEASES
4283  |  CXCL9  |  1.3  |  DISEASES
100289462  |  DEFB4B  |  1.242  |  DISEASES
11266  |  DUSP12  |  1.18  |  DISEASES
23741  |  EID1  |  1.507  |  DISEASES
163126  |  EID2  |  2.219  |  DISEASES
2013  |  EMP2  |  2.509  |  DISEASES
355  |  FAS  |  1.12  |  DISEASES
2633  |  GBP1  |  1.417  |  DISEASES
29933  |  GPR132  |  2.683  |  DISEASES
64344  |  HIF3A  |  2.253  |  DISEASES
51182  |  HSPA14  |  2.011  |  DISEASES
3329  |  HSPD1  |  4.113  |  DISEASES
5654  |  HTRA1  |  1.709  |  DISEASES
3620  |  IDO1  |  1.454  |  DISEASES
3456  |  IFNB1  |  1.67  |  DISEASES
3586  |  IL10  |  3.218  |  DISEASES
3605  |  IL17A  |  2.398  |  DISEASES
3572  |  IL6ST  |  1.207  |  DISEASES
3660  |  IRF2  |  1.099  |  DISEASES
10379  |  IRF9  |  1.328  |  DISEASES
3684  |  ITGAM  |  1.096  |  DISEASES
57134  |  MAN1C1  |  1.589  |  DISEASES
115004  |  MB21D1  |  1.148  |  DISEASES
50488  |  MINK1  |  1.332  |  DISEASES
4318  |  MMP9  |  1.225  |  DISEASES
54545  |  MTMR12  |  2.568  |  DISEASES
4563  |  MT-TG  |  2.119  |  DISEASES
4615  |  MYD88  |  2.509  |  DISEASES
26151  |  NAT9  |  4.883  |  DISEASES
114548  |  NLRP3  |  1.517  |  DISEASES
4923  |  NTSR1  |  1.516  |  DISEASES
5016  |  OVGP1  |  2.74  |  DISEASES
114770  |  PGLYRP2  |  2.112  |  DISEASES
57115  |  PGLYRP4  |  2.497  |  DISEASES
11331  |  PHB2  |  4.775  |  DISEASES
5256  |  PHKA2  |  2.249  |  DISEASES
5284  |  PIGR  |  1.113  |  DISEASES
55124  |  PIWIL2  |  1.134  |  DISEASES
139728  |  PNCK  |  1.024  |  DISEASES
5406  |  PNLIP  |  1.074  |  DISEASES
51552  |  RAB14  |  2.266  |  DISEASES
54734  |  RAB39A  |  3.567  |  DISEASES
6278  |  S100A7  |  2.224  |  DISEASES
6710  |  SPTB  |  2.126  |  DISEASES
10147  |  SUGP2  |  3.355  |  DISEASES
80312  |  TET1  |  3.347  |  DISEASES
7099  |  TLR4  |  2.454  |  DISEASES
7124  |  TNF  |  3.045  |  DISEASES
51699  |  VPS29  |  2.145  |  DISEASES
10810  |  WASF3  |  2.7  |  DISEASES
Locus(Waiting for update.)
Disease ID 900
Disease chlamydia
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype
HPO | Name | Sentences' Count(Total Phenotypes:50)
HP:0000789  |  Infertility  |  11
HP:0011947  |  Respiratory infection  |  7
HP:0000509  |  Conjunctivitis  |  4
HP:0002665  |  Lymphoma  |  4
HP:0000024  |  Inflammation of the prostate  |  3
HP:0001297  |  Cerebral vascular events  |  3
HP:0000010  |  Frequent urinary tract infections  |  3
HP:0002099  |  Asthma  |  3
HP:0002621  |  Atherosclerosis  |  3
HP:0001369  |  Arthritis  |  3
HP:0000031  |  Epididymitis  |  3
HP:0002140  |  Ischemic stroke  |  2
HP:0007868  |  ARMD  |  2
HP:0001658  |  Myocardial infarction  |  2
HP:0000246  |  Sinus inflammation  |  2
HP:0002090  |  Pneumonia  |  2
HP:0002633  |  Vasculitis  |  2
HP:0000618  |  Blindness  |  2
HP:0006532  |  Pneumonia, recurrent episodes  |  2
HP:0001096  |  Keratoconjunctivitis  |  2
HP:0000608  |  Macular degeneration  |  2
HP:0008222  |  Female infertility  |  1
HP:0030127  |  Endometriosis  |  1
HP:0100653  |  Optic neuritis  |  1
HP:0002110  |  Bronchiectasis  |  1
HP:0100796  |  Orchitis  |  1
HP:0002716  |  Lymph node hyperplasia  |  1
HP:0001541  |  Ascites  |  1
HP:0003470  |  Inability to move  |  1
HP:0030158  |  Cervical ectopy  |  1
HP:0001919  |  Acute renal failure  |  1
HP:0010783  |  Erythema  |  1
HP:0012387  |  Bronchitis  |  1
HP:0200043  |  Verrucae  |  1
HP:0004469  |  Chronic bronchitis  |  1
HP:0001677  |  Coronary artery disease  |  1
HP:0100699  |  Scarring  |  1
HP:0011948  |  Acute respiratory tract infection  |  1
HP:0000083  |  Renal insufficiency  |  1
HP:0002014  |  Diarrhea  |  1
HP:0002960  |  Autoimmune condition  |  1
HP:0100601  |  Eclampsia  |  1
HP:0005268  |  Spontaneous abortion  |  1
HP:0100602  |  Pre-eclampsia  |  1
HP:0011496  |  Corneal vascularization  |  1
HP:0030160  |  Uterine cervicitis  |  1
HP:0012819  |  Myocarditis  |  1
HP:0001287  |  Meningitis  |  1
HP:0003251  |  Male infertility  |  1
HP:0003124  |  Elevated serum cholesterol  |  1
Disease ID 900
Disease chlamydia
Manually Symptom
UMLS  | Name(Total Manually Symptoms:51)
C2707258  |  infections
C2364133  |  infection
C1956391  |  temporal arteritis
C1956346  |  coronary artery disease
C1719672  |  severe sepsis
C1393529  |  vascular complications
C1306889  |  peripheral arterial occlusive disease
C1264606  |  persistent infection
C0949083  |  hospital-acquired pneumonia
C0948600  |  organ failure
C0876973  |  pulmonary infection
C0854532  |  myopericarditis
C0549148  |  fitz-hugh-curtis syndrome
C0409702  |  oligoarthritis
C0339901  |  acute respiratory infection
C0311389  |  urethritis
C0311389  |  non-gonococcal urethritis
C0275518  |  acute infection
C0272412  |  splenic abscess
C0238990  |  acute lower respiratory tract infection
C0238356  |  perihepatitis
C0155147  |  chronic follicular conjunctivitis
C0151317  |  chronic infection
C0149937  |  acute interstitial nephritis
C0149725  |  lower respiratory tract infections
C0149725  |  lower respiratory tract infection
C0085435  |  reactive arthritis
C0041912  |  upper respiratory tract infections
C0038826  |  superinfection
C0036130  |  salpingitis
C0035243  |  respiratory tract infections
C0035243  |  respiratory tract infection
C0035243  |  respiratory infections
C0035243  |  respiratory infection
C0035242  |  respiratory tract diseases
C0035229  |  respiratory insufficiency
C0035222  |  adult respiratory distress syndrome
C0035204  |  respiratory diseases
C0029883  |  otitis media with effusion
C0029191  |  orchitis
C0029076  |  ophthalmia neonatorum
C0022081  |  iritis
C0021359  |  infertility
C0019693  |  hiv infection
C0015397  |  eye disease
C0014179  |  endometritis
C0014122  |  infectious endocarditis
C0014118  |  endocarditis
C0014038  |  encephalitis
C0004153  |  atherosclerosis
C0003864  |  arthritis
Text Mined Symptom
UMLS | Name | Sentences' Count(Total Symptoms:19)
C0009450  |  infection  |  230
C0021311  |  infections  |  57
C0021359  |  infertility  |  10
C0151317  |  chronic infection  |  8
C0085435  |  reactive arthritis  |  5
C0035243  |  respiratory infection  |  4
C0041976  |  urethritis  |  3
C0003864  |  arthritis  |  3
C0035243  |  respiratory tract infection  |  3
C0004153  |  atherosclerosis  |  3
C1264606  |  persistent infection  |  2
C0876973  |  pulmonary infection  |  2
C0010068  |  coronary artery disease  |  1
C0149725  |  lower respiratory tract infection  |  1
C0275518  |  acute infection  |  1
C0035242  |  respiratory tract diseases  |  1
C0029191  |  orchitis  |  1
C0019693  |  hiv infection  |  1
C0035204  |  respiratory diseases  |  1
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
Text Mining Genotype(Total Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:0)
(Waiting for update.)
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Disease ID 900
Disease chlamydia
Case(Waiting for update.)