AtPID
Arabidopsis thaliana Protein Interactome Database
Search Results
Query protein:NF-YB1 Network Display| Locus | Symbol | Number of interactions | Annotation | ||||||||||||
| AT2G38880 | NF-YB1 | GSP:33 PPI:34 | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor. | ||||||||||||
| Subcellar localization nucleus: Pubmed12444417; | |||||||||||||||
| Related organ root soluble fraction,1-DE Related article silique urea fraction,1-DE Related article silique detergent fraction,1-DE Related article rosette Phosphopeptide enriched fraction: Soluble fraction of A. thaliana rosette leaves EN; precipitation; strong cation exchange; IMAC/TIO2 affinity chromatography Related article | |||||||||||||||
| Representative Gene Model Description AT2G38880.1:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 987 Blast hits to 987 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 222; Plants - 296; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). AT2G38880.2:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 987 Blast hits to 987 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 222; Plants - 296; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). AT2G38880.3:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 996 Blast hits to 996 proteins in 180 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 224; Plants - 302; Viruses - 0; Other Eukaryotes - 81 (source: NCBI BLink). AT2G38880.4:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 976 Blast hits to 976 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 387; Fungi - 218; Plants - 295; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). AT2G38880.5:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 987 Blast hits to 987 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 222; Plants - 296; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). AT2G38880.6:NUCLEAR FACTOR Y, SUBUNIT B1 (NF-YB1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to water deprivation, regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, CBFA/NFYB, DNA topoisomerase (InterPro:IPR003957), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072), Transcription factor, NFYB/HAP3, conserved site (InterPro:IPR003956); BEST Arabidopsis thaliana protein match is: NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor (TAIR:AT4G14540.1); Has 976 Blast hits to 976 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 387; Fungi - 218; Plants - 295; Viruses - 0; Other Eukaryotes - 76 (source: NCBI BLink). Phosphorylation info: Phosphoprotein with evidence,detail info please click the following link  | |||||||||||||||
| Database cross-references TAIR Gene: AT2G38880; IPI: IPI00895689; IPI00544171; IPI00537267; UniParc: UPI0000196E09; UPI000000C30D; UPI00017391B9; REFSEQ_PROVISIONAL: NP_030436.1; NP_850304.2; NP_850305.2; NP_001031510.1; NP_001031511.1; NP_001031512.1; KEGG: AT2G38880; | |||||||||||||||
| GSP | annotation | methods | related |
| AT3G05690(NF-YA2) | NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2); transcription factor | text mining | 15173116(yeast-2-hybrid assay) |
| AT5G20240(PI) | PI (PISTILLATA); DNA binding / transcription factor | text mining | 16096970(yeast-2-hybrid assay) |
| AT1G28050 | zinc finger (B-box type) family protein | text mining | 17138697(yeast-2-hybrid assay) |
| AT1G72830(NF-YA3) | NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor | text mining | 15173116(yeast-2-hybrid assay) |
| AT5G15840(CO) | CO (CONSTANS); transcription factor/ transcription regulator/ zinc ion binding | text mining | 17138697(Co-immunoprecipitation|yeast-2-hybrid assay|in vitro reconstitution assay with recombinant protein|fluorescence resonance energy transfer (FRET)) |
| AT2G01420(PIN4) | PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter | text mining | 16096970(yeast-2-hybrid assay) |
| AT3G48590(NF-YC1) | NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | text mining | 17138697(Statements in papers that a curator can't trace to another publication) |
| AT5G12840(NF-YA1) | NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor | text mining | 15173116(yeast-2-hybrid assay) |
| AT5G50490(NF-YC5) | NF-YC5 (NUCLEAR FACTOR Y, SUBUNIT C5); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G50480(NF-YC6) | NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT3G48590(NF-YC1) | NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G50470(NF-YC7) | NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G50470(NF-YC7) | NF-YC7 (NUCLEAR FACTOR Y, SUBUNIT C7); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G50480(NF-YC6) | NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G27910(NF-YC8) | NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G38140(NF-YC12) | NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT1G56170(NF-YC2) | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT1G54060(ASIL1) | ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1); sequence-specific DNA binding / transcription factor | text mining | 21798944(yeast-2-hybrid) |
| AT1G08970(NF-YC9) | NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT2G15430(NRPB3) | NRPB3; DNA binding / DNA-directed RNA polymerase/ protein dimerization | text mining | 25490919(FRET) |
| AT1G54830(NF-YC3) | NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G38140(NF-YC12) | NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT5G63470(NF-YC4) | NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G15840(CO) | CO (CONSTANS); transcription factor/ transcription regulator/ zinc ion binding | text mining | 17138697(FRET) |
| AT3G54390 | transcription factor | text mining | 21798944(yeast-2-hybrid) |
| AT1G56170(NF-YC2) | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT1G08970(NF-YC9) | NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | text mining | 25105952(yeast-2-hybrid) |
| AT1G28050 | zinc finger (B-box type) family protein | text mining | 17138697(yeast-2-hybrid) |
| AT5G63470(NF-YC4) | NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT5G27910(NF-YC8) | NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT3G48590(NF-YC1) | NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | text mining | 22912760(yeast-2-hybrid) |
| AT1G54830(NF-YC3) | NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor | text mining | 25105952(yeast-2-hybrid) |
| AT5G50490(NF-YC5) | NF-YC5 (NUCLEAR FACTOR Y, SUBUNIT C5); DNA binding / transcription factor | text mining | 22912760(yeast-2-hybrid) |
| Predicted Functional Partners | annotation |        | Total |
| AT1G09030 | No related data. |     |  |