AtPID
Arabidopsis thaliana Protein Interactome Database
Search Results
Query protein:NF-YA3 Network Display| Locus | Symbol | Number of interactions | Annotation | ||||||||||||
| AT1G72830 | NF-YA3 | GSP:12 PPI:26 | NF-YA3 (NUCLEAR FACTOR Y, SUBUNIT A3); transcription factor. | ||||||||||||
| Subcellar localization nucleus: Pubmed12444417; | |||||||||||||||
| Representative Gene Model Description AT1G72830.1:NUCLEAR FACTOR Y, SUBUNIT A3 (NF-YA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8); transcription factor (TAIR:AT1G17590.3); Has 442 Blast hits to 442 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 88; Plants - 215; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). AT1G72830.2:NUCLEAR FACTOR Y, SUBUNIT A3 (NF-YA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289), CCAAT-binding factor, conserved site (InterPro:IPR018362); BEST Arabidopsis thaliana protein match is: NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8); transcription factor (TAIR:AT1G17590.3); Has 442 Blast hits to 442 proteins in 110 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 88; Plants - 215; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). AT1G72830.3:NUCLEAR FACTOR Y, SUBUNIT A3 (NF-YA3); FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: CCAAT-binding factor complex; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: CCAAT-binding transcription factor, subunit B (InterPro:IPR001289); BEST Arabidopsis thaliana protein match is: NF-YA8 (NUCLEAR FACTOR Y, SUBUNIT A8); transcription factor (TAIR:AT1G17590.3); Has 432 Blast hits to 432 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 88; Plants - 210; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). | |||||||||||||||
| Database cross-references TAIR Gene: AT1G72830; IPI: IPI00656796; IPI00527746; IPI00523283; UniParc: UPI00005DBFB5; UPI000009F6E3; UPI000034F533; REFSEQ_PROVISIONAL: NP_565049.1; NP_974134.1; NP_001031272.1; KEGG: AT1G72830; | |||||||||||||||
| GSP | annotation | methods | related |
| AT2G38880(NF-YB1) | NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | text mining | 15173116(yeast-2-hybrid assay) |
| AT5G50480(NF-YC6) | NF-YC6 (NUCLEAR FACTOR Y, SUBUNIT C6); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT1G54830(NF-YC3) | NF-YC3 (NUCLEAR FACTOR Y, SUBUNIT C3); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT4G14540(NF-YB3) | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT1G21000 | zinc-binding family protein | text mining | 21798944(yeast-2-hybrid) |
| AT3G48590(NF-YC1) | NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT5G63470(NF-YC4) | NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT4G14540(NF-YB3) | NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | text mining | 21798944(yeast-2-hybrid) |
| AT5G63470(NF-YC4) | NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT1G08970(NF-YC9) | NF-YC9 (NUCLEAR FACTOR Y, SUBUNIT C9); DNA binding / transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT1G56170(NF-YC2) | NF-YC2 (NUCLEAR FACTOR Y, SUBUNIT C2); DNA binding / transcription activator/ transcription factor | text mining | 22199235(yeast-2-hybrid) |
| AT3G48590(NF-YC1) | NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | text mining | 22199235(yeast-2-hybrid) |
| Predicted Functional Partners | annotation |        | Total |
| AT1G04950 | No related data. |    |  |
| AT1G50030 | No related data. | | |
| AT2G23070 | casein kinase II alpha chain, putative | | |
| AT2G27470 | No related data. | | |
| AT2G30620 | histone H1.2 | | |
| AT2G42810 | No related data. | | |
| AT3G09660 | No related data. | | |
| AT3G27460 | hypothetical protein | | |
| AT3G45640 | No related data. | | |
| AT4G01370 | No related data. | | |
| AT4G16420 | No related data. | | |
| AT4G20280 | No related data. | | |
| AT4G30890 | No related data. | | |
| AT4G38130 | No related data. | | |
O: Ortholog interaction datasets
G: Shared biological function:Go Ontology
E: Co-expression
F: Gene fusion method
N: Gene neighbors method
P: Phylogenetic profile method
D: Enriched domain pair
What does the displayed number mean when your mouse moved over a certain icon?(LR)
| Transcriptional Regulation |
| Transcription factor | Target gene | Detail info | Related Artical |
| HY5 [AT5G11260] | AT1G72830 | Relationship:Repressed Detected Organs:Hypocotyl | 17337630 |
