GWASdb Snp Trait(Total Genotypes:358) |
---|
CHR |
POS |
SNPID |
REF |
ALT |
ORI_SNPID |
PMID |
P_VALUE |
P_VALUE_TEXT |
OR/BETA |
CI95_TEXT |
GWAS_INITIAL_SAMPLE_SIZE |
SUB_POPULATION |
SUPER_POPULATION |
GWAS_TRAIT |
HPO_ID |
HPO_TERM |
DO_ID |
DO_TERM |
MESH_ID |
MESH_TERM |
EFO_ID |
EFO_TERM |
DOLITE_TERM |
RISK_ALLELE |
PUBLICATION_TYPE |
AA |
GENE_SYMBOL |
TYPE |
REFGENE |
1 | 15495620 | rs16851354 | T | C | rs16851354 | 24057671 | 4.84E-05 | Imputed | 3.45 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16851354-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
1 | 18678170 | rs16861827 | C | T | rs16861827 | 24057671 | 5.91E-05 | Typed | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16861827-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
1 | 19820119 | rs1995311 | T | G | rs1995311 | 22306650 | 1.87E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
1 | 24062987 | rs10917420 | C | T | rs10917420 | 24057671 | 3.25E-05 | Imputed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs10917420-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
1 | 26622911 | rs7541416 | G | A | rs7541416 | 24057671 | 2.40E-05 | Imputed | 4.41 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7541416-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
1 | 56425121 | rs6694316 | G | T | rs6694316 | 24057671 | 1.06E-05 | Typed | 3.13 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6694316-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
1 | 63638791 | rs6588016 | G | A | rs6588016 | 22551897 | 0.0000126 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
1 | 67034789 | rs10889630 | C | T | rs10889630 | 20694014 | 3.74E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | SGIP1 |
1 | 67041309 | rs6699200 | T | C | rs6699200 | 20694014 | 3.28E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | SGIP1 |
1 | 67048743 | rs4147266 | T | G | rs4147266 | 20694014 | 5.58E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | SGIP1 |
1 | 67062569 | rs12117202 | C | G,T | rs12117202 | 20694014 | 5.54E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | SGIP1 |
1 | 67076054 | rs11208921 | C | G | rs11208921 | 20694014 | 6.81E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | SGIP1 |
1 | 67082018 | rs12141816 | G | A | rs12141816 | 20694014 | 5.73E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | SGIP1 |
1 | 67082759 | rs10493412 | G | C | rs10493412 | 20694014 | 5.58E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | SGIP1 |
1 | 67083792 | rs17436311 | A | G | rs17436311 | 20694014 | 5.17E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | SGIP1 |
1 | 68453859 | rs1926278 | C | T | rs1926278 | 24057671 | 2.99E-05 | Imputed | 2.44 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1926278-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
1 | 76989264 | rs315087 | T | C | rs315087 | 24057671 | 1.67E-05 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs315087-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
1 | 83266863 | rs6429839 | G | A | rs6429839 | 22551897 | 0.0000829 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
1 | 89040252 | rs642773 | C | T | rs642773 | 22551897 | 0.000057 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
1 | 96803851 | rs324870 | T | C | rs324870 | 20694014 | 1.00E-04 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
1 | 97711561 | rs12758854 | G | A | rs12758854 | 22551897 | 0.0000572 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
1 | 106832596 | rs2150037 | C | G | rs2150037 | 20694014 | 9.27E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
1 | 106833610 | rs2210094 | C | G | rs2210094 | 20694014 | 7.77E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
1 | 109394524 | rs9440631 | G | A | rs9440631 | 22306650 | 1.45E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | AKNAD1 |
1 | 111417915 | rs2885805 | C | A | rs2885805 | 22551897 | 0.000000215 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
1 | 111422188 | rs1494320 | T | C | rs1494320 | 22551897 | 0.00000279 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
1 | 111468886 | rs1418425 | T | C | rs1418425 | 22551897 | 0.0000535 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
1 | 180420271 | rs7542223 | T | C,G | rs7542223 | 22306650 | 1.46E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | T | ACBD6 |
1 | 194341208 | rs17622017 | C | T | rs17622017 | 22239941 | 6.69E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA | NA |
1 | 205725028 | rs823122 | C | T | rs823122 | 24057671 | 7.51E-05 | Typed | 1.82 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs823122-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
1 | 205725346 | rs823123 | C | T | rs823123 | 24057671 | 6.53E-05 | Typed | 1.96 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs823123-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
1 | 218054687 | rs17739539 | C | T | rs17739539 | 22306650 | 4.66E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
1 | 218054687 | rs17739539 | C | T | rs17739539 | 24057671 | 2.70E-04 | Imputed | 2.78 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17739539-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
1 | 228703289 | rs1925714 | A | G | rs1925714 | 24057671 | 2.00E-07 | NA | 2.86 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1925714-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
1 | 228715923 | rs10916338 | G | A | rs10916338 | 24057671 | 4.74E-06 | Typed | 2.5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs10916338-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
1 | 228716166 | rs2182200 | C | A | rs2182200 | 24057671 | 1.82E-05 | Imputed | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2182200-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A,C |
1 | 232496302 | rs645925 | G | A | rs645925 | 22551897 | 0.0000714 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
1 | 234481678 | rs3001707 | A | G | rs3001707 | 22551897 | 0.0000704 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
1 | 242874885 | rs6676375 | T | C | rs6676375 | 24057671 | 8.00E-07 | NA | 3.03 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6676375-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
2 | 5253598 | rs1075309 | C | T | rs1075309 | 24057671 | 7.00E-07 | NA | 2.86 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1075309-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
2 | 40123904 | rs13385459 | C | A | rs13385459 | 22551897 | 0.0000293 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
2 | 45087265 | rs10203604 | C | T | rs10203604 | 22551897 | 0.0000451 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
2 | 45095097 | rs11674185 | G | A | rs11674185 | 22551897 | 0.0000727 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
2 | 47857914 | rs4952894 | A | G | rs4952894 | 22551897 | 0.0000567 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
2 | 49971406 | rs12328060 | G | A | rs12328060 | 24057671 | 8.60E-05 | Typed | 2.04 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12328060-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
2 | 61772257 | rs6545883 | A | G | rs6545883 | 20694014 | 5.00E-06 | NA | 1.2 | [1.11-1.25] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
2 | 61780200 | rs778753 | T | A | rs778753 | 20694014 | 1.16E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
2 | 61785680 | rs778764 | C | T | rs778764 | 20694014 | 1.25E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
2 | 67208563 | rs1362486 | C | A | rs1362486 | 22551897 | 0.0000277 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
2 | 71138371 | rs10489991 | C | A | rs10489991 | 22551897 | 0.0000244 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
2 | 80800793 | rs1560862 | G | A | rs1560862 | 22551897 | 0.0000598 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G,A |
2 | 111907691 | rs724710 | T | C | rs724710 | 24057671 | 1.79E-05 | Typed | 2.08 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs724710-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
2 | 112500035 | rs17040773 | A | C | rs17040773 | 24057671 | 8.53E-05 | Typed | 2.27 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17040773-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
2 | 112811013 | rs77088208 | C | T | rs77088208 | 22306650 | 3.27E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
2 | 133952040 | rs12691834 | G | A | rs12691834 | 24057671 | 2.38E-05 | Typed | 2.26 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12691834-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
2 | 141424422 | rs16844441 | C | T | rs16844441 | 24057671 | 6.99E-05 | Typed | 2.04 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16844441-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
2 | 154937930 | rs10490534 | T | G | rs10490534 | 20694014 | 9.08E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | GALNT13 |
2 | 159118048 | rs2356081 | T | A | rs2356081 | 22306650 | 1.07E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | CCDC148 |
2 | 170051167 | rs10490131 | A | G | rs10490131 | 22239941 | 2.94E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | LRP2 | intron |
2 | 175724102 | rs2646157 | G | A | rs2646157 | 22306650 | 6.68E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | CHN1 |
2 | 183183111 | rs11679657 | G | T | rs11679657 | 22551897 | 0.0000573 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
2 | 199558179 | rs17826270 | G | A | rs17826270 | 24057671 | 3.08E-05 | Typed | 2.03 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17826270-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
2 | 204708279 | rs231802 | T | C | rs231802 | 24057671 | 1.55E-05 | Typed | 3.45 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs231802-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
2 | 205809938 | rs13390761 | T | G | rs13390761 | 20694014 | 2.73E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | PARD3B |
2 | 205864532 | rs2335705 | C | A | rs2335705 | 20694014 | 4.59E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | PARD3B |
2 | 205864832 | rs2335704 | C | A | rs2335704 | 20694014 | 2.00E-06 | NA | 1.19 | [1.10-1.30] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2335704-C | Research Support, Non-U.S. Gov't | T | PARD3B |
2 | 208345241 | rs722760 | T | C | rs722760 | 22239941 | 9.11E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA | NA |
2 | 208345380 | rs722761 | C | T | rs722761 | 22239941 | 9.11E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA | NA |
2 | 208346410 | rs10490595 | C | T | rs10490595 | 22239941 | 9.11E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA | NA |
2 | 212490272 | rs12616462 | A | C | rs12616462 | 20694014 | 3.65E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | ERBB4 |
3 | 1204591 | rs3772371 | A | C | rs3772371 | 22551897 | 0.0000232 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
3 | 23746535 | rs73048609 | C | T | rs73048609 | 22306650 | 4.25E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
3 | 26543420 | rs2202157 | C | T | rs2202157 | 24057671 | 8.00E-07 | NA | 4 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2202157-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
3 | 59741515 | rs1385715 | A | C | rs1385715 | 24057671 | 9.65E-06 | Imputed | 2.84 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1385715-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
3 | 59981525 | rs212016 | T | C | rs212016 | 22551897 | 0.0000166 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
3 | 59982062 | rs13086424 | C | T | rs13086424 | 22551897 | 0.0000236 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
3 | 60218337 | rs11717164 | G | T | rs11717164 | 22551897 | 0.0000796 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
3 | 65368011 | rs11720037 | T | G | rs11720037 | 22551897 | 0.0000686 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
3 | 65794968 | rs880167 | A | G | rs880167 | 24057671 | 6.63E-05 | Typed | 2.63 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs880167-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
3 | 132270181 | rs6800166 | A | G | rs6800166 | 22551897 | 0.0000141 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
3 | 132294075 | rs9818117 | C | T | rs9818117 | 22551897 | 0.0000509 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
3 | 142411287 | rs9823492 | A | G | rs9823492 | 20694014 | 2.98E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | PLS1 |
3 | 148679329 | rs6780596 | A | C | rs6780596 | 22551897 | 0.0000137 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
3 | 148686636 | rs6764973 | C | T | rs6764973 | 22551897 | 0.000000618 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
3 | 148688304 | rs4681164 | A | G | rs4681164 | 22551897 | 0.0000654 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
3 | 156147368 | rs816546 | G | C | rs816546 | 24057671 | 2.84E-05 | Typed | 3.57 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs816546-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
3 | 156707330 | rs1032044 | C | A | rs1032044 | 24057671 | 3.99E-05 | Imputed | 2.86 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1032044-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
3 | 162117350 | rs6780978 | A | G | rs6780978 | 20694014 | 6.17E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
4 | 11983193 | rs16886509 | G | A | rs16886509 | 22551897 | 0.0000772 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
4 | 36076892 | rs17493657 | T | C | rs17493657 | 24057671 | 3.44E-05 | Imputed | 25 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17493657-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
4 | 47277298 | rs17653240 | T | C | rs17653240 | 24057671 | 2.95E-05 | Imputed | 3.57 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17653240-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
4 | 66777240 | rs7660970 | T | G | rs7660970 | 22551897 | 0.0000621 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
4 | 68531603 | rs13151552 | A | C | rs13151552 | 24057671 | 3.63E-05 | Typed | 3.23 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs13151552-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
4 | 75379906 | rs3104128 | A | G | rs3104128 | 22551897 | 0.0000757 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
4 | 75400315 | rs1994941 | T | C | rs1994941 | 22551897 | 0.0000783 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
4 | 78605369 | rs958617 | A | G | rs958617 | 24057671 | 3.00E-07 | NA | 6.67 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs958617-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
4 | 83647622 | rs17006173 | G | A | rs17006173 | 24057671 | 7.51E-05 | Typed | 4.55 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17006173-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
4 | 105844273 | rs10005603 | T | G | rs10005603 | 20694014 | 7.00E-06 | NA | 1.2 | [1.11-1.25] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
4 | 135428455 | rs4388143 | A | C | rs4388143 | 22551897 | 0.0000911 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
4 | 135438724 | rs11099284 | T | C | rs11099284 | 22551897 | 0.0000476 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
4 | 135439906 | rs4241952 | G | T | rs4241952 | 22551897 | 0.0000476 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
4 | 135440831 | rs4543185 | A | G | rs4543185 | 22551897 | 0.0000476 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
4 | 161366623 | rs12640159 | G | A | rs12640159 | 24057671 | 3.16E-05 | Typed | 2.38 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12640159-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
4 | 161410867 | rs1595665 | T | C | rs1595665 | 24057671 | 1.69E-05 | Imputed | 4.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1595665-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
4 | 170138985 | rs6847734 | T | C | rs6847734 | 22551897 | 0.0000674 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
4 | 188022194 | rs13129961 | G | A | rs13129961 | 22306650 | 9.66E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G,C | NA |
5 | 2382979 | rs458479 | G | A | rs458479 | 22551897 | 0.00000891 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
5 | 2400149 | rs624376 | T | C | rs624376 | 22551897 | 0.0000168 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
5 | 4909055 | rs7714932 | G | A | rs7714932 | 22306650 | 1.29E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
5 | 13210200 | rs16898876 | T | C | rs16898876 | 24057671 | 4.69E-05 | Imputed | 2.38 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16898876-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
5 | 30434848 | rs4131884 | T | G | rs4131884 | 22551897 | 0.000036 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
5 | 36299709 | rs952303 | T | C | rs952303 | 22239941 | 3.82E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | RANBP3L | intron |
5 | 84023574 | rs4293919 | A | G | rs4293919 | 22551897 | 0.0000663 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
5 | 84027805 | rs4458567 | A | G | rs4458567 | 22551897 | 0.0000602 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
5 | 84030377 | rs10462316 | A | C | rs10462316 | 22551897 | 0.0000706 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
5 | 123009579 | rs12658763 | C | T | rs12658763 | 22551897 | 0.0000813 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
5 | 123024195 | rs2194046 | G | A | rs2194046 | 22551897 | 0.0000746 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
5 | 123050342 | rs12515947 | G | A | rs12515947 | 22551897 | 0.0000764 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
5 | 123058338 | rs10478591 | C | T | rs10478591 | 22551897 | 0.0000218 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
5 | 163018061 | rs294582 | T | C | rs294582 | 22306650 | 1.76E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
5 | 164700216 | rs7719559 | T | C | rs7719559 | 22551897 | 0.0000345 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
5 | 164701201 | rs17074571 | A | G | rs17074571 | 22551897 | 0.0000155 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
5 | 164723673 | rs17074826 | A | G | rs17074826 | 22551897 | 0.0000229 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
5 | 164759108 | rs17075255 | C | T | rs17075255 | 22551897 | 0.0000217 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
5 | 164786295 | rs9790890 | G | A | rs9790890 | 22551897 | 0.0000184 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
5 | 168357720 | rs12658168 | G | A | rs12658168 | 24057671 | 8.59E-05 | Typed | 3.57 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12658168-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
5 | 179608656 | rs7380160 | G | A | rs7380160 | 22551897 | 0.0000479 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
6 | 2355675 | rs2505675 | C | T | rs2505675 | 24057671 | 4.00E-06 | NA | 4.55 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2505675-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
6 | 5822232 | rs4604310 | T | C | rs4604310 | 22551897 | 0.000000629 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
6 | 13472642 | rs2560812 | C | T | rs2560812 | 20694014 | 1.35E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | GFOD1 |
6 | 38738834 | rs7769812 | T | G | rs7769812 | 20694014 | 9.13E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | DNAH8 |
6 | 38767450 | rs12211963 | T | C | rs12211963 | 20694014 | 9.14E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | DNAH8 |
6 | 43325793 | rs6933055 | A | G | rs6933055 | 20694014 | 5.14E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | ZNF318 |
6 | 43359265 | rs7750647 | C | T | rs7750647 | 20694014 | 4.45E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
6 | 62985206 | rs9354868 | T | C | rs9354868 | 22551897 | 0.0000484 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
6 | 72392227 | rs175360 | T | C | rs175360 | 20694014 | 2.10E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
6 | 72392503 | rs1552418 | G | C | rs1552418 | 22239941 | 8.37E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA | NA |
6 | 75843360 | rs240727 | G | A | rs240727 | 24057671 | 3.33E-05 | Imputed | 6.25 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs240727-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
6 | 87749625 | rs17448801 | T | A | rs17448801 | 20694014 | 9.30E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
6 | 87750566 | rs17448899 | A | G | rs17448899 | 20694014 | 9.30E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
6 | 87750843 | rs17448940 | T | C | rs17448940 | 20694014 | 9.30E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
6 | 87751047 | rs17546090 | A | C | rs17546090 | 20694014 | 9.30E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
6 | 144689543 | rs6901521 | G | A | rs6901521 | 22551897 | 0.00000235 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
6 | 144714689 | rs11965388 | G | A | rs11965388 | 22551897 | 0.00000235 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
6 | 145852437 | rs449377 | G | C | rs449377 | 24057671 | 2.13E-05 | Typed | 1.91 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs449377-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
6 | 147671994 | rs4896905 | G | A | rs4896905 | 20694014 | 3.22E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | STXBP5 |
6 | 147701133 | rs9373523 | T | G | rs9373523 | 20694014 | 1.00E-06 | NA | 1.3 | [1.11-1.43] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | STXBP5 |
6 | 158274398 | rs2803353 | A | C | rs2803353 | 22551897 | 0.0000428 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
6 | 159857915 | rs4709322 | A | G | rs4709322 | 22551897 | 0.0000127 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
7 | 3455694 | rs17133300 | G | A | rs17133300 | 24057671 | 3.34E-05 | Typed | 2.13 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17133300-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
7 | 20442796 | rs3823974 | T | C | rs3823974 | 22551897 | 0.0000676 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
7 | 21771290 | rs9639391 | T | G | rs9639391 | 24057671 | 1.47E-05 | Imputed | 2.86 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs9639391-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
7 | 25277300 | rs111399899 | A | G | rs111399899 | 22306650 | 8.22E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | NA |
7 | 26624392 | rs2286182 | A | C | rs2286182 | 24057671 | 3.36E-05 | Imputed | 2.86 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2286182-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
7 | 31548371 | rs4723083 | G | A | rs4723083 | 22551897 | 0.000081 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
7 | 43054504 | rs10267586 | T | C | rs10267586 | 20694014 | 5.61E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
7 | 46987740 | rs73694499 | G | T | rs73694499 | 22306650 | 1.26E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
7 | 54618943 | rs2576507 | A | G | rs2576507 | 24057671 | 4.68E-05 | Imputed | 2.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2576507-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
7 | 103444671 | rs39327 | G | A | rs39327 | 22551897 | 0.0000619 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
7 | 110039196 | rs7783665 | G | A | rs7783665 | 24057671 | 4.10E-05 | Typed | 1.79 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7783665-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
7 | 129023597 | rs7787531 | C | T | rs7787531 | 20694014 | 9.00E-06 | NA | 1.22 | [1.10-1.30] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | AHCYL2 |
7 | 152855875 | rs7792156 | T | C | rs7792156 | 22551897 | 0.00000729 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
8 | 3244615 | rs895696 | A | G | rs895696 | 24057671 | 7.10E-05 | Typed | 1.89 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs895696-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
8 | 3244815 | rs895695 | T | C | rs895695 | 24057671 | 4.00E-05 | Typed | 1.89 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs895695-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
8 | 5099914 | rs12156380 | C | A | rs12156380 | 22306650 | 4.86E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | NA |
8 | 40149921 | rs16889079 | A | G | rs16889079 | 24057671 | 5.23E-05 | Typed | 3.23 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16889079-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
8 | 52188213 | rs4873534 | A | G | rs4873534 | 20694014 | 1.17E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
8 | 52189472 | rs16915954 | G | A | rs16915954 | 20694014 | 1.56E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
8 | 52216762 | rs7821565 | T | C | rs7821565 | 20694014 | 8.00E-06 | NA | 1.2 | [1.11-1.25] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
8 | 52219117 | rs6986651 | G | A | rs6986651 | 20694014 | 8.45E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
8 | 52219631 | rs7844531 | T | A | rs7844531 | 20694014 | 8.45E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
8 | 52226463 | rs1837087 | G | T | rs1837087 | 20694014 | 1.52E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
8 | 52226750 | rs10110193 | C | T | rs10110193 | 20694014 | 1.52E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
8 | 59152769 | rs4738654 | A | G | rs4738654 | 24057671 | 1.52E-05 | Imputed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs4738654-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
8 | 59167584 | rs6995423 | G | A | rs6995423 | 24057671 | 2.53E-05 | Imputed | 4.17 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6995423-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
8 | 73016162 | rs28439133 | C | T | rs28439133 | 22306650 | 9.89E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C,T | NA |
8 | 76584886 | rs1449546 | G | A | rs1449546 | 24057671 | 5.81E-05 | Typed | 2.72 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1449546-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
8 | 87690019 | rs10504826 | A | G | rs10504826 | 22551897 | 0.0000749 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
8 | 90656988 | rs160441 | T | C | rs160441 | 20694014 | 8.00E-06 | NA | 1.2 | [1.10-1.30] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs160441-T | Research Support, Non-U.S. Gov't | C | NA |
8 | 106613321 | rs17217757 | G | C | rs17217757 | 24057671 | 3.00E-06 | NA | 2.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17217757-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
8 | 106628965 | rs1817023 | T | G | rs1817023 | 24057671 | 7.47E-05 | Typed | 2.04 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1817023-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
9 | 9912827 | rs10816229 | A | C | rs10816229 | 24057671 | 4.24E-05 | Imputed | 2.5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs10816229-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
9 | 10541177 | rs10809117 | T | G | rs10809117 | 24057671 | 2.27E-05 | Imputed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs10809117-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
9 | 22404681 | rs1410978 | C | T | rs1410978 | 24057671 | 2.06E-05 | Imputed | 2.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1410978-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
9 | 22488678 | rs586716 | G | A | rs586716 | 24057671 | 8.00E-06 | NA | 4.76 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs586716-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
9 | 28971082 | rs3860955 | C | A | rs3860955 | 22551897 | 0.0000606 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
9 | 76575541 | rs4745272 | C | T | rs4745272 | 24057671 | 6.95E-05 | Typed | 2.63 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs4745272-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
9 | 102806574 | rs1418267 | A | G | rs1418267 | 22239941 | 4.56E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | ERP44 | intron |
9 | 102820727 | rs7041338 | G | C | rs7041338 | 22239941 | 5.23E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | ERP44 | intron |
9 | 125065423 | rs7019478 | A | C | rs7019478 | 20694014 | 8.02E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | MRRF |
9 | 138947799 | rs11103291 | G | A | rs11103291 | 24057671 | 3.46E-05 | Typed | 2.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs11103291-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
10 | 5119544 | rs7901781 | C | T | rs7901781 | 24057671 | 3.35E-05 | Imputed | 5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7901781-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
10 | 6629225 | rs10906922 | G | A | rs10906922 | 22551897 | 0.0000329 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
10 | 13494594 | rs2277222 | T | C | rs2277222 | 22551897 | 0.0000355 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
10 | 13495416 | rs7074617 | G | A | rs7074617 | 22551897 | 0.0000765 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
10 | 52309756 | rs2144861 | C | G,T | rs2144861 | 24057671 | 4.71E-05 | Typed | 2.5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2144861-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
10 | 59785350 | rs77751818 | C | T | rs77751818 | 22306650 | 2.42E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
10 | 61341991 | rs1875148 | T | C | rs1875148 | 20694014 | 2.02E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
10 | 96792202 | rs1934954 | T | C | rs1934954 | 24057671 | 3.00E-06 | NA | 7.14 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1934954-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
10 | 113284330 | rs17790693 | T | C | rs17790693 | 22551897 | 0.00000184 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
10 | 120784977 | rs494469 | A | G | rs494469 | 22551897 | 0.0000317 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
10 | 120798655 | rs10787899 | G | A | rs10787899 | 22551897 | 0.00000693 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
10 | 120877710 | rs3858336 | C | T | rs3858336 | 22551897 | 0.00000552 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
10 | 120892542 | rs915272 | T | C | rs915272 | 22551897 | 0.0000294 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
10 | 122102422 | rs10788068 | T | C | rs10788068 | 20694014 | 5.43E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
11 | 1084362 | rs11245936 | G | A | rs11245936 | 22551897 | 0.0000146 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
11 | 13312969 | rs7107287 | G | T | rs7107287 | 20694014 | 9.40E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | ARNTL |
11 | 13996155 | rs1819084 | C | A | rs1819084 | 24057671 | 9.00E-06 | NA | 6.25 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1819084-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
11 | 16425782 | rs1503442 | T | C | rs1503442 | 20694014 | 4.78E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | SOX6 |
11 | 32348789 | rs7116974 | G | A | rs7116974 | 22306650 | 6.88E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | NA |
11 | 32363616 | rs11031728 | C | G | rs11031728 | 22306650 | 3.44E-08 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
11 | 32363616 | rs11031728 | C | G | rs11031728 | 24057671 | 2.86E-06 | Imputed | 1.64 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs11031728-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
11 | 32364187 | rs2057178 | G | A | rs2057178 | 22306650 | 3.00E-11 | NA | 1.1 | [1.01-1.22] | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
11 | 32364187 | rs2057178 | G | A | rs2057178 | 24057671 | 1.00E-12 | binary model | NA | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
11 | 32364187 | rs2057178 | G | A | rs2057178 | 24057671 | 3.00E-06 | NA | 1.61 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2057178-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
11 | 32365430 | rs11031731 | G | A | rs11031731 | 22306650 | 1.85E-08 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
11 | 38264006 | rs7128697 | T | C | rs7128697 | 22551897 | 0.000000619 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
11 | 81142678 | rs10792563 | T | C | rs10792563 | 22551897 | 0.000000472 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
11 | 102929443 | rs7105967 | C | T | rs7105967 | 24057671 | 3.51E-06 | Imputed | 6.67 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7105967-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
11 | 102947465 | rs7947821 | T | C | rs7947821 | 24057671 | 2.00E-06 | NA | 7.14 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7947821-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
11 | 102980594 | rs12283022 | A | G | rs12283022 | 24057671 | 2.00E-06 | NA | 7.14 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12283022-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
11 | 103127065 | rs12294076 | T | C | rs12294076 | 24057671 | 1.00E-07 | NA | 6.25 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12294076-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
11 | 116034074 | rs77576197 | C | G | rs77576197 | 22306650 | 8.81E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
11 | 122580938 | rs7104341 | G | T | rs7104341 | 24057671 | 2.60E-05 | Imputed | 3.85 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7104341-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
11 | 132746594 | rs11824635 | T | G | rs11824635 | 22551897 | 0.0000246 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
12 | 5709635 | rs12426185 | G | C | rs12426185 | 24057671 | 2.45E-05 | Imputed | 2.63 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs12426185-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
12 | 15235173 | rs2058784 | C | T | rs2058784 | 22306650 | 9.92E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
12 | 17829626 | rs2437970 | A | G | rs2437970 | 22551897 | 0.000043 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
12 | 56491880 | rs10783779 | T | G | rs10783779 | 22551897 | 0.0000158 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
12 | 59774030 | rs11173018 | A | G | rs11173018 | 20694014 | 1.99E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A,G | NA |
12 | 59776063 | rs10877268 | A | C | rs10877268 | 20694014 | 8.54E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
12 | 59913026 | rs10877301 | T | A | rs10877301 | 20694014 | 2.58E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
12 | 59916822 | rs11173067 | A | G | rs11173067 | 20694014 | 3.32E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
12 | 59918266 | rs12369542 | T | C | rs12369542 | 20694014 | 2.58E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
12 | 59920382 | rs2175950 | G | A | rs2175950 | 20694014 | 1.79E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
12 | 63311967 | rs3842944 | G | A | rs3842944 | 22551897 | 0.0000169 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
12 | 63699092 | rs1146110 | G | A | rs1146110 | 20694014 | 6.62E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
12 | 77738005 | rs6538140 | G | A | rs6538140 | 24057671 | 4.00E-06 | NA | 4.35 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6538140-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
12 | 80572969 | rs1245016 | G | A | rs1245016 | 24057671 | 2.42E-05 | Typed | 2.17 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1245016-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
12 | 101224010 | rs10860641 | A | G | rs10860641 | 22551897 | 0.0000192 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
12 | 101236914 | rs2138045 | G | A | rs2138045 | 22551897 | 0.0000408 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
12 | 106122964 | rs4130169 | G | A | rs4130169 | 22239941 | 1.27E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA | NA |
12 | 108346718 | rs11835862 | A | G | rs11835862 | 22551897 | 0.0000207 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
12 | 108790577 | rs41489249 | A | G | rs41489249 | 24057671 | 4.10E-05 | Typed | 2.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs41489249-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
12 | 124745586 | rs10846637 | C | T | rs10846637 | 22551897 | 0.0000274 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
12 | 131157748 | rs10848180 | T | C | rs10848180 | 22306650 | 4.58E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | T | NA |
13 | 28059853 | rs9554051 | C | T | rs9554051 | 22551897 | 0.0000797 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
13 | 30509009 | rs17587770 | T | C | rs17587770 | 24057671 | 3.11E-05 | Typed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17587770-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
13 | 30517041 | rs17503526 | G | T | rs17503526 | 24057671 | 2.15E-05 | Typed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17503526-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
13 | 38753676 | rs683479 | T | C | rs683479 | 24057671 | 2.68E-05 | Typed | 2.22 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs683479-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
13 | 39943576 | rs1887474 | T | C | rs1887474 | 22306650 | 1.12E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | LHFP |
13 | 42489501 | rs9525553 | C | T | rs28493371 | 24057671 | 3.92E-05 | Imputed | 2.56 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs28493371-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
13 | 42501654 | rs7318638 | C | T | rs7318638 | 24057671 | 9.73E-06 | Imputed | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7318638-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
13 | 42505674 | rs1900442 | T | C | rs1900442 | 24057671 | 5.00E-06 | NA | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1900442-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
13 | 42525876 | rs7318112 | T | C | rs7318112 | 24057671 | 2.87E-05 | Imputed | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7318112-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
13 | 66461229 | rs9317543 | A | G | rs9317543 | 22239941 | 7.34E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA | NA |
13 | 74335390 | rs1886235 | A | C | rs1886235 | 24057671 | 3.69E-05 | Imputed | 2.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1886235-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
13 | 76446482 | rs1323565 | A | G | rs1323565 | 20694014 | 6.56E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A,G | LOC729420 |
13 | 76447196 | rs9544058 | T | C | rs9544058 | 20694014 | 6.65E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | LOC729420 |
13 | 76451240 | rs1323566 | A | G | rs1323566 | 20694014 | 8.28E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | LOC729420 |
13 | 84260291 | rs116261290 | G | A | rs116261290 | 22306650 | 3.85E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | G | NA |
14 | 25204351 | rs854406 | A | G | rs854406 | 24057671 | 7.40E-05 | Typed | 2.04 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs854406-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
14 | 33837667 | rs1948724 | T | G | rs1948724 | 24057671 | 3.95E-05 | Imputed | 2.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1948724-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
14 | 40771636 | rs17110454 | C | A | rs17110454 | 22306650 | 6.66E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
14 | 45201353 | rs712414 | A | G | rs712414 | 22551897 | 0.00000636 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
14 | 55241049 | rs9323270 | C | A | rs9323270 | 20694014 | 2.69E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | SAMD4A |
14 | 55241645 | rs9323271 | C | G | rs9323271 | 20694014 | 2.56E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | SAMD4A |
14 | 69100618 | rs12890882 | C | T | rs12890882 | 20694014 | 6.91E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
14 | 70502050 | rs17175227 | G | A | rs17175227 | 24057671 | 9.00E-09 | NA | 7.14 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs17175227-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
14 | 72628507 | rs17108326 | A | G | rs17108326 | 22551897 | 0.000019 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
14 | 87185430 | rs11844457 | A | C | rs11844457 | 24057671 | 4.96E-05 | Imputed | 2.08 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs11844457-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
14 | 96026450 | rs11624680 | G | A | rs11624680 | 20694014 | 1.13E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
14 | 96027153 | rs8005962 | C | T | rs8005962 | 20694014 | 8.00E-06 | NA | 1.2 | [1.11-1.25] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
14 | 96029214 | rs2887395 | G | A | rs2887395 | 20694014 | 4.57E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
14 | 96029588 | rs2369019 | G | A | rs2369019 | 20694014 | 6.81E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
14 | 96030442 | rs7152619 | T | C | rs7152619 | 20694014 | 1.96E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
14 | 96030763 | rs8014367 | C | T | rs8014367 | 20694014 | 1.15E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T,C | NA |
14 | 96031957 | rs9323929 | C | T | rs9323929 | 20694014 | 1.07E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
14 | 96049852 | rs8011929 | C | T | rs8011929 | 20694014 | 4.43E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
14 | 101679255 | rs6575836 | G | A | rs6575836 | 24057671 | 8.00E-06 | NA | 4 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6575836-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
14 | 103658864 | rs4906296 | A | G | rs4906296 | 22306650 | 2.83E-05 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | NA |
15 | 27463874 | rs8036270 | A | G | rs8036270 | 22551897 | 0.0000868 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
15 | 61710312 | rs7171652 | C | T | rs7171652 | 24057671 | 3.73E-05 | Imputed | 2.5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7171652-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
15 | 61754358 | rs7163165 | T | G | rs7163165 | 24057671 | 2.73E-05 | Imputed | 2.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs7163165-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
15 | 78966422 | rs28673058 | C | T | rs28673058 | 22306650 | 1.23E-04 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | NA |
15 | 97869259 | rs8038893 | G | A | rs8038893 | 22551897 | 0.0000313 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
16 | 3509056 | rs40363 | G | A | rs40363 | 24057671 | 3.00E-06 | NA | 11.11 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs40363-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
16 | 7141210 | rs4142923 | G | A | rs4142923 | 22239941 | 5.11E-04 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | RBFOX1 | intron |
16 | 17270944 | rs1542421 | A | G | rs1542421 | 20694014 | 5.43E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | XYLT1 |
16 | 17271862 | rs7190310 | G | A | rs7190310 | 20694014 | 7.61E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | XYLT1 |
16 | 17271989 | rs7195149 | G | A | rs7195149 | 20694014 | 5.54E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | XYLT1 |
16 | 17272242 | rs7197587 | A | G | rs7197587 | 20694014 | 4.95E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | XYLT1 |
16 | 17272543 | rs7197476 | C | T | rs7197476 | 20694014 | 4.46E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | XYLT1 |
16 | 17272560 | rs7198185 | A | G | rs7198185 | 20694014 | 5.05E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | XYLT1 |
16 | 17272631 | rs7198350 | A | T | rs7198350 | 20694014 | 4.64E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | XYLT1 |
16 | 17276061 | rs7205152 | T | C | rs7205152 | 20694014 | 2.33E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | XYLT1 |
16 | 17277291 | rs11863514 | G | A | rs11863514 | 20694014 | 5.10E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | XYLT1 |
16 | 53471357 | rs1074182 | T | G | rs1074182 | 24057671 | 3.17E-05 | Imputed | 2.94 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs1074182-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
16 | 73024276 | rs1858800 | C | T | rs1858800 | 22551897 | 0.0000348 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
16 | 73028249 | rs2068360 | C | T | rs2068360 | 22551897 | 0.0000468 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
16 | 73033473 | rs4556810 | C | A | rs4556810 | 22551897 | 0.00000749 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
16 | 75991446 | rs1948632 | G | A | rs1948632 | 20694014 | 8.00E-06 | NA | 1.55 | [1.30-1.90] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
16 | 75994499 | rs7196289 | A | G | rs7196289 | 20694014 | 9.17E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
16 | 76011887 | rs904264 | C | T | rs904264 | 20694014 | 1.14E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
16 | 76012189 | rs904263 | A | G | rs904263 | 20694014 | 5.43E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
16 | 76018855 | rs1353690 | A | C | rs1353690 | 20694014 | 1.83E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
16 | 76019450 | rs7191424 | T | G | rs7191424 | 20694014 | 1.14E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA |
16 | 76019587 | rs7184868 | G | C | rs7184868 | 20694014 | 1.14E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
16 | 82817591 | rs12386026 | C | T | rs12386026 | 20694014 | 2.00E-06 | NA | 1.66 | [1.30-2.00] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C,T | CDH13 |
17 | 30893571 | rs11657700 | G | A | rs11657700 | 22306650 | 5.48E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | MYO1D |
17 | 32893550 | rs12944367 | G | T | rs12944367 | 22551897 | 0.0000138 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
17 | 32894641 | rs7217712 | G | A | rs7217712 | 22551897 | 0.0000115 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
17 | 35748867 | rs8082190 | C | T | rs8082190 | 20694014 | 5.16E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | C17orf78 |
17 | 35850553 | rs712039 | C | T | rs712039 | 20694014 | 3.00E-06 | NA | 1.21 | [1.10-1.30] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | DUSP14 |
17 | 57511073 | rs4968363 | T | C | rs4968363 | 22551897 | 0.0000282 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
17 | 68732090 | rs16976206 | T | C | rs16976206 | 20694014 | 2.15E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
18 | 20154558 | rs35687920 | G | A | rs35687920 | 22306650 | 1.97E-06 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | A | NA |
18 | 20190795 | rs4331426 | G | A | rs4331426 | 20694014 | 7.00E-09 | NA | 1.19 | [1.10-1.30] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs4331426-G | Research Support, Non-U.S. Gov't | A | NA |
18 | 20190795 | rs4331426 | G | A | rs4331426 | 24057671 | 2.00E-08 | binary model | NA | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
18 | 20203953 | rs11874936 | T | C | rs11874936 | 20694014 | 1.61E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T | NA |
18 | 43051699 | rs2543007 | T | C | rs2543007 | 22306650 | 6.53E-08 | NA | NA | NA | 1,329 African ancestry cases; 1,847 African ancestry controls | African(3176) | ALL(3176) | AFR(3176) | ALL(3176) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Meta-Analysis | Research Support, Non-U.S. Gov't | C | SLC14A2 |
18 | 44241478 | rs10502875 | G | A | rs10502875 | 22239941 | 2.97E-05 | NA | NA | NA | 108 Indonesian ancestry cases; 115 Indonesian ancestry controls | Indonesian(223) | ALL(223) | ASN(223) | ALL(223) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | NA | NA |
18 | 58109190 | rs4257308 | C | T | rs4257308 | 20694014 | 6.00E-06 | NA | 1.55 | [1.30-1.90] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
18 | 58110883 | rs7236588 | T | C | rs7236588 | 20694014 | 1.36E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
18 | 58115236 | rs1943238 | A | C | rs1943238 | 20694014 | 8.70E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
18 | 58116442 | rs1943240 | A | G | rs1943240 | 20694014 | 8.39E-06 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
18 | 59019891 | rs7233985 | G | T | rs7233985 | 22551897 | 0.0000716 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
18 | 67399208 | rs7233752 | A | G | rs7233752 | 22551897 | 0.0000535 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A |
18 | 67427168 | rs2298785 | G | A | rs2298785 | 22551897 | 0.0000338 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G |
18 | 67599516 | rs3937015 | T | C | rs3937015 | 20694014 | 1.17E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | CD226 |
18 | 67605807 | rs12970649 | C | T | rs12970649 | 20694014 | 1.87E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | CD226 |
19 | 44932972 | rs1434579 | C | T | rs1434579 | 20694014 | 4.00E-06 | NA | 1.46 | [1.20-1.70] | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | G | ZNF229 |
19 | 45594658 | rs16979659 | G | C | rs16979659 | 24057671 | 7.38E-05 | Typed | 3.13 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs16979659-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
19 | 54449656 | rs35387445 | C | T | rs35387445 | 20694014 | 3.66E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C | NA |
20 | 38300576 | rs11698332 | C | T | rs11698332 | 22551897 | 0.00000295 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with late age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
20 | 38868576 | rs6071980 | T | C | rs6071980 | 22551897 | 2.51E-08 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | T |
20 | 48381482 | rs681074 | A | G | rs681074 | 24057671 | 2.95E-05 | Imputed | 3.23 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs681074-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G,A |
20 | 48394591 | rs582998 | T | C | rs582998 | 24057671 | 3.87E-05 | Imputed | 3.57 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs582998-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
20 | 51312015 | rs6126645 | T | C | rs6126645 | 24057671 | 1.10E-05 | Imputed | 4.35 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs6126645-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
20 | 60451598 | rs4925203 | T | C | rs4925203 | 22551897 | 0.0000626 | NA | NA | NA | 433 Thai ancestry cases; 295 Thai ancestry controls; 188 Japanese ancestry cases; 934 Japanese ancestry controls | Japanese(1122) | Thai(728) | ALL(1850) | ASN(1850) | ALL(1850) | Tuberculosis with early age of onset | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | NA | NA | NA | NA | Tuberculosis | NA | Research Support, Non-U.S. Gov't | C |
21 | 23340459 | rs9981165 | A | T | rs9981165 | 20694014 | 9.06E-05 | NA | NA | NA | 921 Ghanaian cases; 1,740 Ghanaian controls; 1,316 Gambian cases; 1,382 Gambian controls | Ghanaian(2661) | Gambian(2698) | ALL(5359) | AFR(5359) | ALL(5359) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | NA | Research Support, Non-U.S. Gov't | A | NA |
21 | 31405797 | rs2832542 | G | A | rs2832542 | 24057671 | 7.72E-05 | Typed | 5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2832542-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
21 | 42216955 | rs2837857 | C | T | rs2837857 | 24057671 | 2.00E-06 | NA | 3.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs2837857-T | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
21 | 43343510 | rs451390 | G | C | rs451390 | 24057671 | 2.00E-07 | NA | 4.55 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs451390-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
22 | 37544245 | rs3218258 | G | A | rs3218258 | 24057671 | 5.18E-06 | Imputed | 3.7 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs3218258-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
22 | 37544486 | rs3218255 | G | A | rs3218255 | 24057671 | 2.00E-07 | NA | 4 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs3218255-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
X | 17139624 | rs5924599 | G | C | rs5924599 | 24057671 | 8.16E-05 | Imputed | 4.17 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs5924599-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
X | 17151123 | rs5924602 | T | G | rs5924602 | 24057671 | 8.57E-05 | Imputed | 4 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs5924602-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
X | 17167482 | rs11797250 | G | T | rs11797250 | 24057671 | 4.61E-05 | Imputed | 4.35 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs11797250-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
X | 33784063 | rs5928363 | A | T | rs5928363 | 24057671 | 4.00E-06 | NA | 8.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs5928363-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
X | 47906480 | rs142513793 | C | T | rs142513793 | 24057671 | 2.00E-07 | NA | 5 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs142513793-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
X | 142823406 | rs192138826 | G | T | rs192138826 | 24057671 | 6.91E-06 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs192138826-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
X | 142827026 | rs190796883 | A | C | rs190796883 | 24057671 | 6.91E-06 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs190796883-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | A |
X | 142827897 | rs141261373 | C | T | rs141261373 | 24057671 | 6.91E-06 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs141261373-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |
X | 142830316 | rs145189928 | T | G | rs145189928 | 24057671 | 6.91E-06 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs145189928-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
X | 142832475 | rs149912409 | T | C | rs149912409 | 24057671 | 6.91E-06 | Imputed | 7.69 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs149912409-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
X | 142838848 | rs138067008 | G | A | rs138067008 | 24057671 | 6.20E-06 | Imputed | 8.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs138067008-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | G |
X | 142842119 | rs139956886 | C | T | rs139956886 | 24057671 | 6.00E-06 | NA | 8.33 | NA | 642 South African coloured cases; 91 South African coloured controls | South African(733) | ALL(733) | AFR(733) | ALL(733) | Tuberculosis | HPOID:0011275 | Recurrent mycobacterium avium complex infections | DOID:399 | tuberculosis | D014376 | Tuberculosis | tuberculosis | Tuberculosis | rs139956886-C | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't | C |