temporal lobe epilepsy |
Disease ID | 657 |
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Disease | temporal lobe epilepsy |
Manually Symptom | (Waiting for update.) |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:25) C1504404 | hippocampal sclerosis | 142 C0036572 | seizures | 41 C0036572 | seizure | 29 C2062593 | mesial temporal sclerosis | 21 C0033975 | psychosis | 12 C0011570 | depression | 11 C0751495 | partial seizures | 4 C0009952 | febrile seizures | 4 C0086132 | depressive symptoms | 3 C0149958 | complex partial seizures | 3 C0003467 | anxiety | 3 C0871381 | social cognition | 2 C0234533 | generalized seizures | 2 C0235169 | excitability | 2 C0431380 | cortical dysplasia | 2 C0033975 | psychoses | 1 C0029166 | oral manifestations | 1 C0679466 | cognitive deficits | 1 C0013421 | dystonia | 1 C0494475 | generalized tonic-clonic seizures | 1 C0001726 | affective symptoms | 1 C0234213 | deafferentation | 1 C0872410 | posturing | 1 C0311335 | convulsive status epilepticus | 1 C0041696 | major depression | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:20) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs1045642 | 25458099 | 5243 | ABCB1 | umls:C0014556 | BeFree | Polymorphism of the multidrug resistance 1 gene MDR1/ABCB1 C3435T and response to antiepileptic drug treatment in temporal lobe epilepsy. | 0.088815624 | 2014 | ABCB1 | 7 | 87509329 | A | T,G |
rs11191692 | 21439911 | 348 | APOE | umls:C0014556 | BeFree | Furthermore, the positive association between rs11191692 and TLE independent of apolipoprotein E ε4 was supported by five SNPs haplotype analysis. | 0.024103583 | 2011 | CALHM2;CALHM1 | 10 | 103454008 | G | A |
rs118192250 | 19453707 | 3786 | KCNQ3 | umls:C0014556 | BeFree | The effects of the Kcnq2 gene A306T mutation and the Kcnq3 gene G311V mutation were determined for minimal clonic, minimal tonic hindlimb extension, and partial psychomotor seizures. | 0.000271442 | 2009 | KCNQ3 | 8 | 132175457 | C | A |
rs1799990 | 17092648 | 5621 | PRNP | umls:C0014556 | BeFree | Association between the M129V variant allele of PRNP gene and mild temporal lobe epilepsy in women. | 0.010725648 | 2007 | PRNP | 20 | 4699605 | A | G |
rs1801278 | 25458098 | 3643 | INSR | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS1 | 2 | 226795828 | C | T,G,A |
rs1801278 | 25458098 | 8660 | IRS2 | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS1 | 2 | 226795828 | C | T,G,A |
rs1801278 | 25458098 | 3667 | IRS1 | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS1 | 2 | 226795828 | C | T,G,A |
rs1805057 | 12601092 | 2550 | GABBR1 | umls:C0014556 | BeFree | GABA(B) receptor 1 polymorphism (G1465A) is associated with temporal lobe epilepsy. | 0.023079948 | 2003 | GABBR1 | 6 | 29613344 | C | T |
rs1805057 | 16278087 | 2550 | GABBR1 | umls:C0014556 | BeFree | Lack of GABABR1 gene variation (G1465A) in a Chinese population with temporal lobe epilepsy. | 0.023079948 | 2005 | GABBR1 | 6 | 29613344 | C | T |
rs1805057 | 16499773 | 2550 | GABBR1 | umls:C0014556 | BeFree | Recently a coding nonsynonymous single-nucleotide polymorphism (SNP; G1465A) in the GABBR1 gene was reported to be associated with the incidence and severity of temporal lobe epilepsy (TLE). | 0.023079948 | 2006 | GABBR1 | 6 | 29613344 | C | T |
rs1805057 | 18255321 | 2550 | GABBR1 | umls:C0014556 | BeFree | GABABR1 (G1465A) gene variation and temporal lobe epilepsy controversy: new evidence. | 0.023079948 | 2008 | GABBR1 | 6 | 29613344 | C | T |
rs1805057 | 21621395 | 2550 | GABBR1 | umls:C0014556 | BeFree | GABBR1 gene polymorphism(G1465A)isassociated with temporal lobe epilepsy. | 0.023079948 | 2011 | GABBR1 | 6 | 29613344 | C | T |
rs1805097 | 25458098 | 3643 | INSR | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS2 | 13 | 109782884 | C | T |
rs1805097 | 25458098 | 3667 | IRS1 | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS2 | 13 | 109782884 | C | T |
rs1805097 | 25458098 | 8660 | IRS2 | umls:C0014556 | BeFree | Association of insulin receptor H1085H C>T, insulin receptor substrate 1 G972R and insulin receptor substrate 2 1057G/A polymorphisms with refractory temporal lobe epilepsy in Han Chinese. | 0.000271442 | 2014 | IRS2 | 13 | 109782884 | C | T |
rs3812718 | 22578703 | 6323 | SCN1A | umls:C0014556 | BeFree | Failure to find association between febrile seizures and SCN1A rs3812718 polymorphism in south Indian patients with mesial temporal lobe epilepsy and hippocampal sclerosis. | 0.003267234 | 2012 | SCN1A | 2 | 166053034 | C | T |
rs4906902 | 22082659 | 2562 | GABRB3 | umls:C0014556 | BeFree | The rs4906902 G allele of the GABRB3 gene was overrepresented in mTLE patients with depression; individuals homozygous for the G allele showed reduced GABRB3 mRNA expression. | 0.002995792 | 2011 | GABRB3 | 15 | 26774621 | A | G |
rs6295 | 22222329 | 3350 | HTR1A | umls:C0014556 | BeFree | C allele of 5-HT1A C-1019G polymorphism might be an independent risk factor for anxiety disorders in temporal lobe epilepsy. | 0.005905708 | 2012 | HTR1A | 5 | 63962738 | C | G |
rs6295 | 22222329 | 6532 | SLC6A4 | umls:C0014556 | BeFree | We evaluate the influence of 5-HTTLPR and 5-HTTVNTR polymorphisms in the 5-HTT gene and the C-1019G polymorphism in the 5-HT1A gene in psychiatric comorbidities of TLE. | 0.014364013 | 2012 | HTR1A | 5 | 63962738 | C | G |
rs6295 | 23333373 | 3350 | HTR1A | umls:C0014556 | BeFree | The mRNA expression of HTR1a was significantly more abundant in hippocampal mRNA of TLE patients homozygous for the rs6295 C-allele as compared to those with the GG-genotype. | 0.005905708 | 2013 | HTR1A | 5 | 63962738 | C | G |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:4) | |||||||||||||||||||||||||||||
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CHR | POS | SNPID | REF | ALT | ORI_SNPID | PMID | P_VALUE | P_VALUE_TEXT | OR/BETA | CI95_TEXT | GWAS_INITIAL_SAMPLE_SIZE | SUB_POPULATION | SUPER_POPULATION | GWAS_TRAIT | HPO_ID | HPO_TERM | DO_ID | DO_TERM | MESH_ID | MESH_TERM | EFO_ID | EFO_TERM | DOLITE_TERM | RISK_ALLELE | PUBLICATION_TYPE | AA | GENE_SYMBOL | TYPE | REFGENE |
2 | 166926428 | rs11692675 | T | C | rs11692675 | 24014518 | 4.78E-06 | MTLEHS+FS versus controls | 1.3 | [1.16-1.46] | up to 1,018 European ancestry cases; 7,552 European ancestry controls | European(8570) | ALL(8570) | EUR(8570) | ALL(8570) | Mesial temporal lobe epilepsy with hippocampal sclerosis | HPOID:0001250 | Seizures | DOID:3328 | temporal lobe epilepsy | NA | NA | NA | NA | Epilepsy | rs11692675-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
2 | 166926428 | rs11692675 | T | C | rs11692675 | 24014518 | 4.87E-07 | MTLEHS versus controls | 1.21 | [1.12-1.30] | up to 1,018 European ancestry cases; 7,552 European ancestry controls | European(8570) | ALL(8570) | EUR(8570) | ALL(8570) | Mesial temporal lobe epilepsy with hippocampal sclerosis | HPOID:0001250 | Seizures | DOID:3328 | temporal lobe epilepsy | NA | NA | NA | NA | Epilepsy | rs11692675-G | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
2 | 166978750 | rs7587026 | C | A | rs7587026 | 24014518 | 3.00E-09 | MTLEHS+FS vs. Controls | 1.42 | [1.26-1.59] | up to 1,018 European ancestry cases; 7,552 European ancestry controls | European(8570) | ALL(8570) | EUR(8570) | ALL(8570) | Mesial temporal lobe epilepsy with hippocampal sclerosis | HPOID:0001250 | Seizures | DOID:3328 | temporal lobe epilepsy | NA | NA | NA | NA | Epilepsy | rs7587026-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
2 | 166978750 | rs7587026 | C | A | rs7587026 | 24014518 | 4.00E-08 | MTLEHS vs. Controls | 1.24 | [1.15-1.34] | up to 1,018 European ancestry cases; 7,552 European ancestry controls | European(8570) | ALL(8570) | EUR(8570) | ALL(8570) | Mesial temporal lobe epilepsy with hippocampal sclerosis | HPOID:0001250 | Seizures | DOID:3328 | temporal lobe epilepsy | NA | NA | NA | NA | Epilepsy | rs7587026-A | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:11) | |||||||||
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CUI | ChemicalName | ChemicalID | CasRN | DiseaseName | DiseaseID | DirectEvidence | PubMedIDs | ||
C0014556 | capsaicin | D002211 | 404-86-4 | epilepsy, temporal lobe | MESH:D004833 | marker/mechanism | 20144892 | ||
C0014556 | carbamazepine | D002220 | 298-46-4 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 15514420 | ||
C0014556 | lamotrigine | C047781 | 84057-84-1 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 16499746 | ||
C0014556 | medroxyprogesterone acetate | D017258 | 71-58-9 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 123269 | ||
C0014556 | methotrexate | D008727 | 1959/5/2 | epilepsy, temporal lobe | MESH:D004833 | marker/mechanism | 20470218 | ||
C0014556 | phenytoin | D010672 | 57-41-0 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 4032590 | ||
C0014556 | pilocarpine | D010862 | 92-13-7 | epilepsy, temporal lobe | MESH:D004833 | marker/mechanism | 10999513 | ||
C0014556 | tacrolimus | D016559 | 109581-93-3 | epilepsy, temporal lobe | MESH:D004833 | marker/mechanism | 16573841 | ||
C0014556 | topiramate | C052342 | 97240-79-4 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 12859294 | ||
C0014556 | valproic acid | D014635 | 99-66-1 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 12859294 | ||
C0014556 | vigabatrin | D020888 | 60643-86-9 | epilepsy, temporal lobe | MESH:D004833 | therapeutic | 10802764 |
FDA approved drug and dosage information(Total Drugs:0) | |
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(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |