PedAM
Pediatric Disease Annotations & Medicines
| schizophrenia | ||||
| Disease ID | 65 |
|---|---|
| Disease | schizophrenia |
| Manually Symptom | UMLS | Name(Total Manually Symptoms:262) C2712333 | agitation C2712332 | vomiting C2712322 | tachycardia C2707011 | behavioral symptoms C2697391 | rheumatoid arthritis C2697363 | endometrial cancer C2678504 | osteoporosis C2598155 | pain C2364133 | infection C2364118 | weakness C2364108 | stigma C2364074 | drug abuse C2364072 | depression C2364051 | fatigue C2364046 | hopelessness C2232697 | mood symptoms C2220255 | motor disturbances C2164151 | dangerous symptoms C2096315 | headache C2003861 | flushing C1963237 | insomnia C1963234 | serum sickness C1963185 | obesity C1963184 | nystagmus C1963138 | hypertension C1963101 | encephalopathy C1963064 | anxiety C1956346 | coronary artery disease C1868649 | panic disorder C1863767 | m syndrome C1848140 | social cognition C1839611 | n syndrome C1801950 | g syndrome C1705254 | congenital malformation C1563743 | adiposity C1555764 | infectious disease C1555754 | cardiovascular disease C1522560 | neurodegenerative disorders C1521736 | parkinson's disease C1518296 | neuropathogenesis C1504665 | diabetic ketoacidosis C1456786 | paranoid states C1415369 | scurvy C1393529 | vascular complications C1389280 | basal ganglia calcification C1366535 | diabetes insipidus C1334804 | motor manifestations C1313980 | ischemic heart disease C1272174 | scotopic sensitivity C1269683 | major depression C1253937 | pericardial effusion C1145670 | respiratory failure C1047241 | anomia C0948265 | metabolic syndrome C0878643 | epiphenomenon C0878544 | cardiomyopathy C0871189 | psychotic symptoms C0856043 | xxyy syndrome C0854440 | fatty acid deficiency C0852192 | asthenic conditions C0851578 | sleep disturbances C0851578 | sleep disorders C0850024 | gluten sensitivity C0849895 | disturbed speech C0848782 | urological impairment C0796095 | c syndrome C0751837 | ataxic gait C0742831 | coronary artery disease risk factors C0740279 | cerebellar atrophy C0702094 | agranulocytosis C0700361 | distress C0700201 | sleep disturbance C0700109 | rigidity C0686347 | tardive dyskinesia C0684249 | lung cancer C0679466 | cognitive deficits C0678222 | breast cancer C0600427 | cocaine dependence C0600427 | cocaine addiction C0575081 | gait disturbances C0566027 | communication impairment C0549622 | sexual dysfunction C0543891 | neuroleptic-induced tardive dyskinesia C0525041 | cognitive symptoms C0525041 | cognitive symptom C0520679 | obstructive sleep apnea syndrome C0497552 | nervous system abnormality C0497327 | dementia C0456909 | blindness C0436596 | apathy C0432474 | klinefelter's syndrome C0427086 | involuntary movements C0423479 | ear symptoms C0423479 | ear symptom C0422833 | ent symptoms C0392702 | abnormal involuntary movements C0392702 | abnormal involuntary movement C0392156 | akathisia C0376293 | stigmata C0334044 | dyscrasia C0282207 | cronkhite-canada syndrome C0278135 | tactile extinction C0277788 | pathognomonic symptom C0271650 | impaired glucose tolerance C0271097 | usher's syndrome C0270549 | generalised anxiety disorder C0270458 | psychotic depression C0268813 | primary polydipsia C0268406 | senile amyloidosis C0265965 | dyskeratosis congenita C0265493 | cat eye syndrome C0262471 | ent problem C0262405 | cerebral dysfunction C0262405 | brain dysfunction C0242422 | parkinsonism C0242339 | dyslipidemia C0242339 | dyslipidaemia C0240805 | prodrome C0235946 | cortical atrophy C0235946 | cerebral atrophy C0235946 | brain atrophy C0235169 | excitability C0234507 | anosognosia C0234133 | extrapyramidal symptoms C0234131 | motor dysfunction C0233767 | tactile hallucinations C0233766 | gustatory hallucinations C0233763 | visual hallucinations C0233762 | auditory hallucinations C0233762 | auditory hallucination C0233746 | perceptual disturbance C0233467 | inappropriate affect C0233401 | psychiatric symptoms C0221505 | brain lesions C0221347 | acrocyanosis C0221163 | motor disorders C0220847 | hepatitis c C0178417 | anhedonia C0152115 | orofacial dyskinesia C0152027 | sensory disturbance C0152027 | sensory disorders C0087169 | withdrawal symptoms C0086543 | cataracts C0086439 | hypoactivity C0086132 | symptoms of depression C0086132 | depressive symptoms C0085693 | acute appendicitis C0085625 | hypoalgesia C0085623 | akinesia C0085602 | polydipsia C0085281 | addictive behavior C0078981 | arachnoid cyst C0043121 | wernicke's encephalopathy C0043049 | water intoxication C0042870 | vitamin d deficiency C0042769 | virus infection C0042373 | vascular disorders C0042024 | incontinence C0041408 | turner syndrome C0041327 | lung tuberculosis C0041296 | tuberculosis C0040558 | toxoplasmosis C0038454 | stroke C0038436 | post-traumatic stress disorder C0037822 | speech disorders C0037822 | speech disorder C0037036 | hypersalivation C0036939 | induced psychosis C0036868 | sex chromosome abnormalities C0036572 | seizures C0035258 | restless legs syndrome (rls) C0035258 | restless legs syndrome C0033975 | psychotic disorders C0033975 | psychosis C0033975 | psychoses C0033953 | sexual disorders C0033922 | psychomotor disorders C0033375 | prolactinoma C0033117 | priapism C0032617 | polyuria C0031572 | social phobia C0031315 | phantom limb C0031212 | personality disorders C0031128 | peripheral vestibular disease C0030975 | perceptual disorders C0030920 | ulcer disease C0030662 | pathological gambling C0030499 | parasitosis C0030484 | paraphrenia C0029896 | ent disease C0029166 | oral manifestations C0029089 | eye movement impairment C0028850 | eye movement disorders C0028850 | disorders of eye movements C0028768 | obsessive-compulsive disorder C0027765 | neurological disorders C0026654 | moyamoya disease C0026650 | movement disorders C0026650 | movement disorder C0025517 | metabolic disorders C0025362 | mental retardation C0025261 | memory disorders C0023530 | leukopenia C0023015 | language disorders C0023015 | language disorder C0022408 | arthropathy C0021645 | insulin coma C0021141 | syndrome of inappropriate secretion of antidiuretic hormone C0021122 | impulse control disorders C0021053 | immune dysfunction C0020903 | illusion C0020625 | hyponatremia C0020514 | hyperprolactinemia C0020514 | hyperprolactinaemia C0020473 | hyperlipidemia C0020456 | hyperglycemia C0018799 | heart disease C0018524 | hallucinations C0015371 | extrapyramidal syndrome C0015310 | exotropia C0014544 | epilepsy C0013473 | eating disorders C0013447 | ear disorder C0013447 | ear disease C0013384 | dyskinesia C0013384 | abnormal movements C0013295 | duodenal ulcer C0011860 | type 2 diabetes C0011860 | diabetes C0011849 | diabetes mellitus C0011168 | dysphagia C0011156 | deficiency diseases C0010068 | coronary heart disease C0010054 | coronary atherosclerosis C0009460 | communication disorder C0009324 | ulcerative colitis C0009241 | cognitive disorders C0009171 | cocaine abuse C0007760 | cerebellar dysfunctions C0007760 | cerebellar dysfunction C0007760 | cerebellar abnormalities C0007570 | gluten intolerance C0007398 | catatonia C0006868 | cannabis abuse C0006111 | brain disease C0005750 | stasis syndrome C0005747 | blepharospasm C0004936 | mental disorders C0004352 | autism C0004303 | central auditory dysfunction C0003635 | apraxia C0003615 | appendicitis C0003469 | anxiety disorders C0003469 | anxiety disorder C0003431 | antisocial personality disorder C0003125 | anorexia nervosa C0002625 | amnesic syndrome C0002395 | alzheimer's disease C0002020 | alexithymia C0001973 | alcoholism C0001726 | affective symptoms C0000727 | acute abdomen |
| Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:118) C0679466 | cognitive deficits | 145 C0033975 | psychosis | 84 C0018524 | hallucinations | 55 C0796095 | c syndrome | 48 C0948265 | metabolic syndrome | 47 C0011570 | depression | 45 C0277787 | stigma | 44 C0871189 | psychotic symptoms | 43 C0011847 | diabetes | 31 C0871381 | social cognition | 29 C0085631 | agitation | 29 C0086132 | depressive symptoms | 25 C0178417 | anhedonia | 19 C0233762 | auditory hallucination | 17 C0233762 | auditory hallucinations | 17 C0233401 | psychiatric symptoms | 16 C0009450 | infection | 16 C0007398 | catatonia | 16 C0028754 | obesity | 15 C0686347 | tardive dyskinesia | 15 C0003467 | anxiety | 14 C1839611 | n syndrome | 13 C0007222 | cardiovascular disease | 13 C0013384 | dyskinesia | 11 C0033953 | sexual dysfunction | 10 C0004352 | autism | 9 C0525041 | cognitive symptoms | 9 C0917801 | insomnia | 9 C0004936 | mental disorders | 8 C0030193 | pain | 8 C0006868 | cannabis abuse | 6 C0233763 | visual hallucinations | 6 C0040558 | toxoplasmosis | 6 C0085602 | polydipsia | 6 C0033975 | psychoses | 6 C0020514 | hyperprolactinemia | 6 C0028768 | obsessive-compulsive disorder | 5 C0037317 | sleep disturbance | 5 C0085632 | apathy | 5 C0851578 | sleep disorders | 5 C0020538 | hypertension | 5 C0525041 | cognitive symptom | 5 C0033975 | psychotic disorders | 5 C0011849 | diabetes mellitus | 5 C0231303 | distress | 5 C0011860 | type 2 diabetes | 5 C0025517 | metabolic disorders | 4 C0392156 | akathisia | 4 C0159069 | impaired glucose tolerance | 4 C0001726 | affective symptoms | 4 C0002020 | alexithymia | 4 C0029456 | osteoporosis | 4 C0086439 | hypoactivity | 4 C0018799 | heart disease | 3 C0497327 | dementia | 3 C0234133 | extrapyramidal symptoms | 3 C0002395 | alzheimer's disease | 3 C0038454 | stroke | 3 C0014544 | epilepsy | 3 C0020903 | illusion | 3 C0013473 | eating disorders | 3 C0030319 | panic disorder | 3 C0242339 | dyslipidemia | 3 C0422833 | ent symptoms | 3 C0242339 | dyslipidaemia | 3 C0001973 | alcoholism | 2 C0026650 | movement disorder | 2 C0013146 | drug abuse | 2 C0006142 | breast cancer | 2 C0242379 | lung cancer | 2 C0086132 | symptoms of depression | 2 C0023015 | language disorder | 2 C0240805 | prodrome | 2 C0010068 | coronary heart disease | 2 C0543891 | neuroleptic-induced tardive dyskinesia | 2 C0009241 | cognitive disorders | 2 C0270458 | psychotic depression | 2 C0029896 | ent disease | 2 C0150041 | hopelessness | 2 C0038436 | post-traumatic stress disorder | 2 C0019196 | hepatitis c | 2 C0020625 | hyponatremia | 2 C0456909 | blindness | 2 C0085625 | hypoalgesia | 2 C2232697 | mood symptoms | 2 C0003469 | anxiety disorder | 2 C0262405 | brain dysfunction | 2 C0021053 | immune dysfunction | 1 C0004941 | behavioral symptoms | 1 C0878544 | cardiomyopathy | 1 C0427086 | involuntary movements | 1 C0235169 | excitability | 1 C0003469 | anxiety disorders | 1 C0020473 | hyperlipidemia | 1 C0013384 | abnormal movements | 1 C0041696 | major depression | 1 C0022735 | klinefelter's syndrome | 1 C0010068 | coronary artery disease | 1 C0234131 | motor dysfunction | 1 C0003615 | appendicitis | 1 C0011168 | dysphagia | 1 C1393529 | vascular complications | 1 C0036572 | seizures | 1 C0003431 | antisocial personality disorder | 1 C0003873 | rheumatoid arthritis | 1 C0021167 | incontinence | 1 C0221505 | brain lesions | 1 C0031212 | personality disorders | 1 C0262405 | cerebral dysfunction | 1 C0007760 | cerebellar dysfunction | 1 C0848782 | urological impairment | 1 C0026650 | movement disorders | 1 C1863767 | m syndrome | 1 C0043049 | water intoxication | 1 C0262471 | ent problem | 1 C0033117 | priapism | 1 C0041408 | turner syndrome | 1 C0004093 | weakness | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
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| (Waiting for update.) |
All Snps(Total Genotypes:900) | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
| rs10036665 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA3 | 5 | 138252460 | T | A |
| rs1006737 | 23974872 | 775 | CACNA1C | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.13497291 | 2013 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 25290268 | 775 | CACNA1C | umls:C0036341 | BeFree | The variant at rs1006737 in the L-type voltage-gated calcium channel (alpha 1c subunit) CACNA1C gene is reliably associated with both bipolar disorder and schizophrenia. | 0.13497291 | 2014 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 21676128 | 288 | ANK3 | umls:C0036341 | BeFree | The rs10994336 ANK3 and rs1006737 CACNA1C genetic variants have recently been identified as the most consistent, genome-wide significant risk factors for bipolar disorder, while the CACNA1C variant has also been associated with schizophrenia and major depression. | 0.12853425 | 2011 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 24275578 | 641455 | POTEM | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000542884 | 2013 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 21078228 | 775 | CACNA1C | umls:C0036341 | BeFree | Recent genetic studies found the A allele of the variant rs1006737 in the alpha 1C subunit of the L-type voltage-gated calcium channel (CACNA1C) gene to be over-represented in patients with psychosis, including schizophrenia, bipolar disorder and major depressive disorder. | 0.13497291 | 2011 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 24275578 | 9790 | BMS1 | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000814326 | 2013 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 23404764 | 775 | CACNA1C | umls:C0036341 | BeFree | On the other hand, our results indicate that alterations in the functional coupling between the prefrontal cortex and the medial temporal lobe could represent a neural system phenotype that is mediated by CACNA1C rs1006737 and other genetic susceptibility loci for schizophrenia and bipolar disorder. | 0.13497291 | 2012 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 21676128 | 775 | CACNA1C | umls:C0036341 | BeFree | The rs10994336 ANK3 and rs1006737 CACNA1C genetic variants have recently been identified as the most consistent, genome-wide significant risk factors for bipolar disorder, while the CACNA1C variant has also been associated with schizophrenia and major depression. | 0.13497291 | 2011 | CACNA1C | 12 | 2236129 | G | A |
| rs1006737 | 23437284 | 775 | CACNA1C | umls:C0036341 | BeFree | Several genetic studies have implicated the CACNA1C SNP rs1006737 in bipolar disorder (BD) and schizophrenia (SZ) pathology. | 0.13497291 | 2013 | CACNA1C | 12 | 2236129 | G | A |
| rs1009080 | 21926974 | 10076 | PTPRU | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | NA | 1 | 29958713 | G | A |
| rs1009153 | 22317777 | 23191 | CYFIP1 | umls:C0036341 | BeFree | We also found SNP rs1009153 in CYFIP1 was associated with schizophrenia (OR=0.82, 95% CI=0.73-0.93, allelic P=.044 after permutation). | 0.000814326 | 2013 | CYFIP1 | 15 | 22896157 | C | T |
| rs1009382 | 14755442 | 1791 | DNTT | umls:C0036341 | BeFree | The TDT analysis demonstrated that of the nine SNPs, three were associated with schizophrenia, including rs1009382 (P = 0.00047), rs204887 (P = 0.007), and rs8283 (P = 0.015). | 0.004071628 | 2004 | TNXB | 6 | 32058330 | C | T,A |
| rs1011313 | 19937977 | 5999 | RGS4 | umls:C0036341 | BeFree | Polymorphisms in RGS4, G72/G30, and PIP5K2A were neither associated with SZ-ND nor with SZ-D. SNP8NRG241930 showed association with the PANSS cognitive and hostility/excitability factors, rs1011313 with the negative factor and SDS total score, and rs10917670 in RGS4 was associated with the depression factor. | 0.216710349 | 2010 | DTNBP1 | 6 | 15633201 | T | C |
| rs10133111 | 19023125 | 7187 | TRAF3 | umls:C0036341 | GAD | [Combining imaging and genetic data from a GWAS identified genes related to forebrain development and stress response, already implicated in schizophrenic dysfunction, as affecting prefrontal efficiency. Although the identified genes require confirmation i] | 0.002367032 | 2009 | TRAF3 | 14 | 102910984 | G | A |
| rs1018351 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | IGSF5 | 21 | 39777594 | T | C |
| rs1018351 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | IGSF5 | 21 | 39777594 | T | C |
| rs10224497 | NA | 8379 | MAD1L1 | umls:C0036341 | GAD | NA | 0.122638474 | NA | MAD1L1 | 7 | 2110332 | A | G |
| rs1033772 | 22247771 | 3026 | HABP2 | umls:C0036341 | BeFree | We found significant association with schizophrenia of the TCF7L2 gene intronic SNP, rs12573128, (p = 7.01×10⁻⁶) and of the nearby intergenic SNP, rs1033772, (p = 6.59×10⁻⁶) which is positioned between TCF7L2 and HABP2. | 0.000271442 | 2012 | NA | 10 | 113486173 | G | A |
| rs1034428 | 18163426 | 788 | SLC25A20 | umls:C0036341 | BeFree | The analysis at the haplotype level showed that susceptibility to schizophrenia was associated with the specific haplotype rs989638-rs1034428-rs2227098 CAC (P = 0.0008). | 0.000542884 | 2008 | GRIA3 | X | 123303197 | A | G |
| rs10399805 | 18281018 | 861 | RUNX1 | umls:C0036341 | BeFree | The rs10399805 SNP is located at position -247 and disrupts the C/EBP-AML-1 binding site in the gene promoter; the risk allele is predicted to increase CHI3L1 expression, as has been reported in several postmortem schizophrenia studies. | 0.002638474 | 2008 | CHI3L1 | 1 | 203186870 | G | A |
| rs10399805 | 18281018 | 2720 | GLB1 | umls:C0036341 | BeFree | The rs10399805 SNP is located at position -247 and disrupts the C/EBP-AML-1 binding site in the gene promoter; the risk allele is predicted to increase CHI3L1 expression, as has been reported in several postmortem schizophrenia studies. | 0.000271442 | 2008 | CHI3L1 | 1 | 203186870 | G | A |
| rs1042522 | 11814547 | 7157 | TP53 | umls:C0036341 | BeFree | In order to examine the role of the p53 gene for the pathogenesis of schizophrenic disorders, patients (n=155) and control subjects (n=168) were genotyped for the p53-Pro72Arg polymorphism. | 0.151290555 | 2001 | TP53 | 17 | 7676154 | G | T,C |
| rs1042522 | 21296169 | 7157 | TP53 | umls:C0036341 | BeFree | Convergent evidence of the contribution of TP53 genetic variation (Pro72Arg) to metabolic activity and white matter volume in the frontal lobe in schizophrenia patients. | 0.151290555 | 2011 | TP53 | 17 | 7676154 | G | T,C |
| rs1042522 | 15450681 | 788 | SLC25A20 | umls:C0036341 | BeFree | Though rs1042522 and rs8064946 did not show positive association with schizophrenia, we did observe statistically significant differences on SNP rs2078486 (P-value = 0.029; OR = 1.21; 95% CI 1.02-1.42) and on haplotype CAC (P-value = 0.0068; OR = 1.36; 95% CI 1.09-1.70). | 0.000542884 | 2004 | TP53 | 17 | 7676154 | G | T,C |
| rs1045280 | 19049562 | 409 | ARRB2 | umls:C0036341 | GAD | [The coding-synonymous polymorphism rs1045280 (Ser280Ser) in beta-arrestin 2 (ARRB2) gene is associated with tardive dyskinesia in Chinese patients with schizophrenia.] | 0.002909916 | 2008 | ARRB2 | 17 | 4719343 | C | T |
| rs1045280 | 19049562 | 409 | ARRB2 | umls:C0036341 | BeFree | The coding-synonymous polymorphism rs1045280 (Ser280Ser) in beta-arrestin 2 (ARRB2) gene is associated with tardive dyskinesia in Chinese patients with schizophrenia. | 0.002909916 | 2008 | ARRB2 | 17 | 4719343 | C | T |
| rs1045642 | 20060871 | 5243 | ABCB1 | umls:C0036341 | BeFree | The present study does not suggest a major influence of MDR1 G2677T/A and C3435T polymorphisms on treatment response during short-term risperidone therapy in patients with schizophrenia or schizoaffective disorder. | 0.013539756 | 2010 | ABCB1 | 7 | 87509329 | A | T,G |
| rs1045642 | 16386826 | 5243 | ABCB1 | umls:C0036341 | BeFree | The present study was therefore designed to examine whether the major polymorphisms of MDR1 gene, C3435T and G2677T/A are related to therapeutic response to neuroleptics in the treatment of schizophrenia. | 0.013539756 | 2006 | ABCB1 | 7 | 87509329 | A | T,G |
| rs1045881 | 21890328 | 9378 | NRXN1 | umls:C0036341 | BeFree | The putative functional rs1045881 marker of neurexin-1 in schizophrenia and clozapine response. | 0.228251156 | 2011 | NRXN1 | 2 | 49921834 | C | T |
| rs10489202 | 22037555 | 25874 | MPC2 | umls:C0036341 | GWASCAT | Common variants on 8p12 and 1q24.2 confer risk of schizophrenia. | 0.122638474 | 2011 | MPC2 | 1 | 167933841 | G | T |
| rs10489202 | 22037555 | 25874 | MPC2 | umls:C0036341 | GAD | [Common variants on 8p12 and 1q24.2 confer risk of schizophrenia.] | 0.122638474 | 2011 | MPC2 | 1 | 167933841 | G | T |
| rs1049353 | 21695734 | 56144 | PCDHA4 | umls:C0036341 | BeFree | In the present study, we investigated three polymorphisms (rs1049353, rs806368, and rs4707436) in the cannabinoid type 1 receptor gene (CNR1) and weight gain in Korean patients with schizophrenia receiving olanzapine treatment. | 0.003800186 | 2011 | CNR1 | 6 | 88143916 | C | T |
| rs10503253 | 23320435 | 64478 | CSMD1 | umls:C0036341 | BeFree | Neuropsychological effects of the CSMD1 genome-wide associated schizophrenia risk variant rs10503253. | 0.203995683 | 2013 | CSMD1 | 8 | 4323322 | C | A |
| rs10503253 | 21926974 | 64478 | CSMD1 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.203995683 | 2011 | CSMD1 | 8 | 4323322 | C | A |
| rs10503253 | 23839771 | 64478 | CSMD1 | umls:C0036341 | BeFree | Neural effects of the CSMD1 genome-wide associated schizophrenia risk variant rs10503253. | 0.203995683 | 2013 | CSMD1 | 8 | 4323322 | C | A |
| rs10503253 | 25056061 | 64478 | CSMD1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.203995683 | 2014 | CSMD1 | 8 | 4323322 | C | A |
| rs10503253 | 21926974 | 64478 | CSMD1 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.203995683 | 2011 | CSMD1 | 8 | 4323322 | C | A |
| rs10503253 | 24630139 | 64478 | CSMD1 | umls:C0036341 | BeFree | The CSMD1 genome-wide associated schizophrenia risk variant rs10503253 affects general cognitive ability and executive function in healthy males. | 0.203995683 | 2014 | CSMD1 | 8 | 4323322 | C | A |
| rs10503256 | 22688191 | 64478 | CSMD1 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.203995683 | 2012 | CSMD1 | 8 | 4356657 | A | G |
| rs10520163 | 25056061 | 1182 | CLCN3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | CLCN3 | 4 | 169705401 | T | C |
| rs10551063 | 23277265 | 4852 | NPY | umls:C0036341 | BeFree | Because NPY is a potent orexigenic peptide stimulating food intake, and genetic variation of the gene has been shown to influence development of obesity, we investigated the impact of NPY polymorphisms on antipsychotic-induced BWG.We analyzed 5 polymorphisms in the NPY gene (rs10551063, rs16147, rs5573, rs5574, and rs16475) in schizophrenia subjects (n = 226), treated mostly with clozapine and olanzapine for up to 14 weeks. | 0.015721222 | 2013 | NPY | 7 | 24283308 | GT | - |
| rs1059004 | 17964117 | 1267 | CNP | umls:C0036341 | BeFree | We found that genetic polymorphisms in CNP (rs2070106) and OLIG2 (rs1059004 and rs9653711), previously associated with schizophrenia, predicted low expression of these genes. | 0.022451187 | 2008 | OLIG2 | 21 | 33028155 | C | A |
| rs1064395 | 25220293 | 1463 | NCAN | umls:C0036341 | BeFree | The A allele of the single nucleotide polymorphism (SNP) rs1064395 in the NCAN gene has recently been identified as a susceptibility factor for bipolar disorder and schizophrenia. | 0.001085767 | 2014 | NCAN | 19 | 19250926 | G | A |
| rs1065852 | 16490169 | 1565 | CYP2D6 | umls:C0036341 | BeFree | The C100T polymorphism of the CYP2D6 gene and the C163A polymorphism of the CYP1A2 gene may be associated with neuroleptic drug-induced tardive dyskinesia in Chinese patients with schizophrenia. | 0.051440724 | 2006 | CYP2D6;LOC102723722 | 22 | 42130692 | G | A |
| rs1065852 | 16490169 | 1544 | CYP1A2 | umls:C0036341 | BeFree | The C100T polymorphism of the CYP2D6 gene and the C163A polymorphism of the CYP1A2 gene may be associated with neuroleptic drug-induced tardive dyskinesia in Chinese patients with schizophrenia. | 0.02801339 | 2006 | CYP2D6;LOC102723722 | 22 | 42130692 | G | A |
| rs10733631 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | NA | 9 | 118601779 | A | C |
| rs10735810 | 16634022 | 7421 | VDR | umls:C0036341 | BeFree | Four single-nucleotide polymorphisms (SNPs; rs10735810/FokI, rs1544410/BsmI, rs7975232/ApaI, and rs731236/TaqI) in the VDR gene were genotyped in 179 individuals with schizophrenia and 189 healthy controls. | 0.000542884 | 2006 | NA | NA | NA | NA | NA |
| rs10759 | 23332465 | 2559 | GABRA6 | umls:C0036341 | BeFree | Our results suggest that rs3219151 of GABRA6 was associated significantly to decrease the risk of schizophrenia, rs10759 (RGS4) was possible to increase the risk of schizophrenia by miRNA altering the binding of miRNAs to their targets influencing susceptibility to schizophrenia. | 0.123181358 | 2012 | RGS4 | 1 | 163076561 | G | T,A |
| rs10759 | 23332465 | 5999 | RGS4 | umls:C0036341 | BeFree | Our results suggest that rs3219151 of GABRA6 was associated significantly to decrease the risk of schizophrenia, rs10759 (RGS4) was possible to increase the risk of schizophrenia by miRNA altering the binding of miRNAs to their targets influencing susceptibility to schizophrenia. | 0.216710349 | 2012 | RGS4 | 1 | 163076561 | G | T,A |
| rs10759986 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | NA | 9 | 118601150 | A | C |
| rs10759987 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | NA | 9 | 118601856 | A | C |
| rs10761482 | 20185149 | 288 | ANK3 | umls:C0036341 | GAD | [The association of ANK3 with schizophrenia is intriguing in light of recent associations of ANK3 with bipolar disorder, thereby supporting the hypothesis of an overlap in genetic susceptibility between these psychopathological entities.] | 0.12853425 | 2010 | ANK3 | 10 | 60325579 | T | C |
| rs10770141 | 24417771 | 7054 | TH | umls:C0036341 | BeFree | Functional polymorphism (C-824T) of the tyrosine hydroxylase gene affects IQ in schizophrenia. | 0.031085127 | 2013 | TH;MIR4686 | 11 | 2172610 | A | G |
| rs10791097 | 25056061 | 100507431 | LOC100507431 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | LOC100507431 | 11 | 130848735 | T | G |
| rs10798059 | 19560328 | 5321 | PLA2G4A | umls:C0036341 | BeFree | Eight SNPs detected across the PPARG gene did not show allelic association with schizophrenia; a weak association was detected at rs2745557 in the PTGS2 locus (chi2=4.19, p=0.041) and rs10798059 in the PLA2G4A locus (chi2=4.28, p=0.039) but these associations did not survive after 10,000 permutations to correct the p-value (global p=0.246). | 0.026360994 | 2009 | PLA2G4A | 1 | 186830478 | G | A |
| rs10798059 | 19560328 | 5743 | PTGS2 | umls:C0036341 | BeFree | Eight SNPs detected across the PPARG gene did not show allelic association with schizophrenia; a weak association was detected at rs2745557 in the PTGS2 locus (chi2=4.19, p=0.041) and rs10798059 in the PLA2G4A locus (chi2=4.28, p=0.039) but these associations did not survive after 10,000 permutations to correct the p-value (global p=0.246). | 0.0889015 | 2009 | PLA2G4A | 1 | 186830478 | G | A |
| rs10894294 | 21926974 | 399979 | SNX19 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | NA | 11 | 130960853 | C | A |
| rs10894294 | 21926974 | 154661 | RUNDC3B | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | NA | 11 | 130960853 | C | A |
| rs10911902 | 18347602 | 5132 | PDC | umls:C0036341 | GAD | [Genomewide association for schizophrenia in the CATIE study: results of stage 1.] | 0.002367032 | 2008 | NA | 1 | 186663185 | C | T |
| rs10916832 | 25354644 | 57576 | KIF17 | umls:C0036341 | BeFree | Intriguingly, one PINK1 SNP (rs10916832), which showed a marginally significant association in only Hunan samples (P = 0.032), is associated with the expression of a schizophrenia susceptible gene KIF17 according to the expression quantitative trait locus (eQTL) analysis. | 0.000542884 | 2014 | CDA | 1 | 20619151 | C | T |
| rs10917670 | 19937977 | 5999 | RGS4 | umls:C0036341 | BeFree | Polymorphisms in RGS4, G72/G30, and PIP5K2A were neither associated with SZ-ND nor with SZ-D. SNP8NRG241930 showed association with the PANSS cognitive and hostility/excitability factors, rs1011313 with the negative factor and SDS total score, and rs10917670 in RGS4 was associated with the depression factor. | 0.216710349 | 2010 | NA | 1 | 163063052 | C | T |
| rs10952 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA3 | 5 | 138252651 | T | A |
| rs10994336 | 21676128 | 288 | ANK3 | umls:C0036341 | BeFree | The rs10994336 ANK3 and rs1006737 CACNA1C genetic variants have recently been identified as the most consistent, genome-wide significant risk factors for bipolar disorder, while the CACNA1C variant has also been associated with schizophrenia and major depression. | 0.12853425 | 2011 | ANK3 | 10 | 60420054 | C | T |
| rs10994336 | 21676128 | 775 | CACNA1C | umls:C0036341 | BeFree | The rs10994336 ANK3 and rs1006737 CACNA1C genetic variants have recently been identified as the most consistent, genome-wide significant risk factors for bipolar disorder, while the CACNA1C variant has also been associated with schizophrenia and major depression. | 0.13497291 | 2011 | ANK3 | 10 | 60420054 | C | T |
| rs10994359 | 24461634 | 288 | ANK3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.12853425 | 2013 | ANK3 | 10 | 60462349 | T | C |
| rs10994359 | 24461634 | 775 | CACNA1C | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.13497291 | 2013 | ANK3 | 10 | 60462349 | T | C |
| rs10994359 | 24461634 | 3699 | ITIH3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.120542884 | 2013 | ANK3 | 10 | 60462349 | T | C |
| rs11038167 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | GAD | [We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 x 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 x 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 x 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 x 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 x 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 x 10(-11), OR = 1.27).] | 0.242909916 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038167 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038167 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | GWASCAT | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038167 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038167 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038167 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | TSPAN18 | 11 | 44821583 | A | C |
| rs11038172 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | TSPAN18 | 11 | 44834046 | A | G |
| rs11038172 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | TSPAN18 | 11 | 44834046 | A | G |
| rs11038172 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | TSPAN18 | 11 | 44834046 | A | G |
| rs11038172 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | TSPAN18 | 11 | 44834046 | A | G |
| rs11064768 | 18332876 | 160777 | CCDC60 | umls:C0036341 | GWASCAT | A genome-wide association study in 574 schizophrenia trios using DNA pooling. | 0.122367032 | 2009 | CCDC60 | 12 | 119380704 | A | G |
| rs11064768 | 18332876 | 160777 | CCDC60 | umls:C0036341 | GAD | [A genome-wide association study in 574 schizophrenia trios using DNA pooling.] | 0.122367032 | 2009 | CCDC60 | 12 | 119380704 | A | G |
| rs1106568 | 25056061 | 2823 | GPM6A | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.125362824 | 2014 | GPM6A | 4 | 175940150 | G | A |
| rs1107592 | NA | 8379 | MAD1L1 | umls:C0036341 | GAD | NA | 0.122638474 | NA | MAD1L1 | 7 | 2001797 | A | G |
| rs11098403 | 25139529 | 9348 | NDST3 | umls:C0036341 | BeFree | rs11098403 polymorphism near NDST3 is associated with a reduced risk of schizophrenia in a Han Chinese population. | 0.000542884 | 2014 | NA | 4 | 117725752 | A | G |
| rs111294930 | 25056061 | 101927134 | LINC01470 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | LINC01470 | 5 | 152797561 | A | G |
| rs11130874 | 21926974 | 5793 | PTPRG | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | PTPRG | 3 | 62079095 | A | G |
| rs11136000 | 20738160 | 1191 | CLU | umls:C0036341 | BeFree | Association analysis between the rs11136000 single nucleotide polymorphism in clusterin gene, rs3851179 single nucleotide polymorphism in clathrin assembly lymphoid myeloid protein gene and the patients with schizophrenia in the Chinese population. | 0.002638474 | 2010 | CLU | 8 | 27607002 | T | C |
| rs11136000 | 20738160 | 1191 | CLU | umls:C0036341 | GAD | [Association analysis between the rs11136000 single nucleotide polymorphism in clusterin gene, rs3851179 single nucleotide polymorphism in clathrin assembly lymphoid myeloid protein gene and the patients with schizophrenia in the Chinese population.] | 0.002638474 | 2010 | CLU | 8 | 27607002 | T | C |
| rs11191419 | 25056061 | 119032 | C10orf32 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | C10orf32;C10orf32-ASMT | 10 | 102852578 | T | A |
| rs11191419 | 25056061 | 100528007 | C10orf32-ASMT | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | C10orf32;C10orf32-ASMT | 10 | 102852578 | T | A |
| rs11191580 | 21926974 | 22978 | NT5C2 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122367032 | 2011 | NT5C2 | 10 | 103146454 | T | C |
| rs11191580 | 21926974 | 22978 | NT5C2 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.122367032 | 2011 | NT5C2 | 10 | 103146454 | T | C |
| rs11191580 | 22688191 | 22978 | NT5C2 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.122367032 | 2012 | NT5C2 | 10 | 103146454 | T | C |
| rs11206127 | NA | 7804 | LRP8 | umls:C0036341 | GAD | NA | 0.002909916 | NA | LRP8 | 1 | 53247877 | G | A |
| rs112175378 | 9187671 | 6310 | ATXN1 | umls:C0036341 | BeFree | We have studied the coding region of the SCA1 gene (exons 8 and 9) in samples from schizophrenia patients and have identified two amino-acid variants (S186C and P754S) and three nucleotide polymorphisms (1409A/G, 1865T/C and 2150A/G). | 0.010553895 | 1997 | ATXN1 | 6 | 16327755 | T | A |
| rs11220082 | 22688191 | 9638 | FEZ1 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.139455395 | 2012 | FEZ1 | 11 | 125454069 | C | T |
| rs11242417 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA3 | 5 | 138263645 | T | G |
| rs11246226 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | DRD4 | 11 | 641191 | C | A |
| rs11246226 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | DRD4 | 11 | 641191 | C | A |
| rs11265461 | 22479419 | 6504 | SLAMF1 | umls:C0036341 | GAD | [Genome-wide association study of treatment refractory schizophrenia in Han Chinese.] | 0.002367032 | 2012 | NA | 1 | 160660353 | T | C |
| rs1142636 | 22807112 | 6853 | SYN1 | umls:C0036341 | BeFree | The C allele of synonymous SNP (rs1142636, Asn170Asn) in SYN1 is a risk factor for the susceptibility of Korean female schizophrenia. | 0.000542884 | 2012 | SYN1 | X | 47606962 | A | G,C |
| rs11532322 | 23974872 | 91574 | C12orf65 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | C12orf65 | 12 | 123246876 | A | G |
| rs11558538 | 25768024 | 3176 | HNMT | umls:C0036341 | BeFree | Association of histamine N-methyltransferase Thr105Ile polymorphism with Parkinson's disease and schizophrenia in Han Chinese: a case-control study. | 0.000542884 | 2015 | HNMT | 2 | 138002079 | C | T |
| rs11575874 | 11317225 | 3361 | HTR5A | umls:C0036341 | BeFree | Association of a 5-HT(5A) receptor polymorphism, Pro15Ser, to schizophrenia. | 0.003724241 | 2001 | HTR5A;HTR5A-AS1 | 7 | 155070942 | C | A,T |
| rs11608185 | 19207030 | 1312 | COMT | umls:C0036341 | BeFree | Our results demonstrated initial significant associations of two SNPs for DRD2 (rs11608185, genotype: chi(2) = 6.29, p-value = 0.043; rs6275, genotype: chi(2) = 8.91, p-value = 0.011), and one SNP in the COMT gene (rs4680, genotype: chi(2) = 6.67, p-value = 0.035 and allele: chi(2) = 4.75, p-value = 0.029; odds ratio: 1.33, 95% confidence interval: 1.02-1.73), but not after correction for multiple comparisons indicating a weak association of individual markers of DRD2 and COMT with schizophrenia. | 0.345417491 | 2009 | DRD2 | 11 | 113424254 | T | C |
| rs11685299 | 25056061 | 8452 | CUL3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | CUL3 | 2 | 224526579 | C | A |
| rs11693094 | 25056061 | 91752 | ZNF804A | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.266297524 | 2014 | ZNF804A | 2 | 184736693 | C | T |
| rs11740474 | 25056061 | 55568 | GALNT10 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | GALNT10 | 5 | 154301187 | A | T |
| rs11764337 | NA | 8379 | MAD1L1 | umls:C0036341 | GAD | NA | 0.122638474 | NA | MAD1L1 | 7 | 1852673 | C | T |
| rs11789399 | 20889312 | 23245 | ASTN2 | umls:C0036341 | BeFree | The best associated SNP rs11789399 was located at 9q33.1 (p=2.38 × 10(-6), 5.74 × 10(-4), and 5.56 × 10(-9), for schizophrenia, bipolar disorder and meta-analysis of schizophrenia and bipolar disorder, respectively), where one flanking gene, ASTN2 (220kb away) has been associated with attention deficit/hyperactivity disorder and schizophrenia. | 0.003181358 | 2010 | LOC105376249 | 9 | 118597008 | G | A |
| rs11789399 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | LOC105376249 | 9 | 118597008 | G | A |
| rs11789407 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | LOC105376249 | 9 | 118597268 | C | A |
| rs11859266 | 25645869 | 3029 | HAGH | umls:C0036341 | BeFree | The variants in HAGH, rs11859266 and rs3743852, showed significant associations with schizophrenia in males at allelic and genotype levels, which remained persistent after multiple testing with the exception of rs3743852 for the genotype model. | 0.000271442 | 2015 | HAGH | 16 | 1813980 | C | G |
| rs11868035 | 24329191 | 6720 | SREBF1 | umls:C0036341 | BeFree | For schizophrenia individuals with the SREBF1 rs11868035 T allele, incomplete response to statin medications may be seen. | 0.002909916 | 2014 | SREBF1;RAI1 | 17 | 17811787 | G | A |
| rs11894868 | 21563301 | 4099 | MAG | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.013254501 | 2011 | RTN4 | 2 | 55002884 | T | C |
| rs11894868 | 21563301 | 57142 | RTN4 | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.13926983 | 2011 | RTN4 | 2 | 55002884 | T | C |
| rs12140791 | NA | 9722 | NOS1AP | umls:C0036341 | GAD | NA | 0.036986953 | NA | NOS1AP;LOC105371475 | 1 | 162121494 | C | T |
| rs1233710 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | ZKSCAN4 | 6 | 28247668 | C | T |
| rs1233710 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | ZKSCAN4 | 6 | 28247668 | C | T |
| rs1233710 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | ZKSCAN4 | 6 | 28247668 | C | T |
| rs1233710 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | ZKSCAN4 | 6 | 28247668 | C | T |
| rs12425434 | 24606907 | 5053 | PAH | umls:C0036341 | BeFree | The PAH rs12425434, previously associated with schizophrenia, was borderline associated with orofacial clefts. | 0.003995683 | 2014 | PAH | 12 | 102846289 | C | T |
| rs12573128 | 22247771 | 3026 | HABP2 | umls:C0036341 | BeFree | We found significant association with schizophrenia of the TCF7L2 gene intronic SNP, rs12573128, (p = 7.01×10⁻⁶) and of the nearby intergenic SNP, rs1033772, (p = 6.59×10⁻⁶) which is positioned between TCF7L2 and HABP2. | 0.000271442 | 2012 | TCF7L2 | 10 | 112971038 | A | G |
| rs1261117 | 23894747 | 6925 | TCF4 | umls:C0036341 | GWASCAT | We replicated SNPs in TCF4 (P = 2.53 x 10(-10)) and NOTCH4 (P = 3.16 x 10(-7)) that are among the most robust SCZ findings. | 0.216525617 | 2013 | TCF4 | 18 | 55282426 | T | C |
| rs12666575 | 22688191 | 8379 | MAD1L1 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.122638474 | 2012 | MAD1L1 | 7 | 1964786 | C | T |
| rs12699131 | 21926974 | 83698 | CALN1 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002638474 | 2011 | CALN1 | 7 | 72286331 | A | G |
| rs12704290 | 25056061 | 2913 | GRM3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.301609676 | 2014 | GRM3 | 7 | 86798310 | G | A |
| rs12807809 | 19571808 | 4900 | NRGN | umls:C0036341 | GAD | [Our findings implicating the MHC region are consistent with an immune component to schizophrenia risk, whereas the association with NRGN and TCF4 points to perturbation of pathways involved in brain development, memory and cognition.] | 0.2512586 | 2009 | NA | 11 | 124736389 | T | C |
| rs12807809 | 19571808 | 53340 | SPA17 | umls:C0036341 | GAD | [Common variants conferring risk of schizophrenia.] | 0.002367032 | 2009 | NA | 11 | 124736389 | T | C |
| rs12807809 | 22856365 | 4900 | NRGN | umls:C0036341 | BeFree | The effect of the neurogranin schizophrenia risk variant rs12807809 on brain structure and function. | 0.2512586 | 2012 | NA | 11 | 124736389 | T | C |
| rs12807809 | 20673877 | 4900 | NRGN | umls:C0036341 | BeFree | Our results confirm that common risk factors in the major histocompatibility complex region and TCF4 gene are associated with schizophrenia in Han Chinese, but our results fail to show an association with SNP rs12807809 in the NRGN gene. | 0.2512586 | 2010 | NA | 11 | 124736389 | T | C |
| rs12807809 | 21799211 | 4900 | NRGN | umls:C0036341 | BeFree | Genetic variation in rs12807809 in the NRGN gene has recently been confirmed to be associated with schizophrenia in a meta-analysis of genome-wide association studies: the T-allele was found to be genome-wide significantly associated with schizophrenia. | 0.2512586 | 2013 | NA | 11 | 124736389 | T | C |
| rs12807809 | 24386483 | 4900 | NRGN | umls:C0036341 | BeFree | Effects of the neurogranin variant rs12807809 on thalamocortical morphology in schizophrenia. | 0.2512586 | 2013 | NA | 11 | 124736389 | T | C |
| rs12826178 | 25056061 | 6472 | SHMT2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | SHMT2 | 12 | 57228588 | G | T |
| rs12845396 | 25056061 | 57502 | NLGN4X | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122367032 | 2014 | NLGN4X | X | 6111492 | A | T |
| rs12887734 | 25056061 | 84334 | APOPT1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | APOPT1 | 14 | 103580497 | G | T |
| rs12922317 | 23358160 | 92017 | SNX29 | umls:C0036341 | GWASCAT | Genome-wide study of association and interaction with maternal cytomegalovirus infection suggests new schizophrenia loci. | 0.12 | 2012 | SNX29 | 16 | 11983775 | A | G |
| rs12991836 | 23974872 | 9839 | ZEB2 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | ZEB2 | 2 | 144383974 | A | C |
| rs13025591 | 21926974 | 116987 | AGAP1 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122367032 | 2011 | AGAP1 | 2 | 235886699 | A | C |
| rs13025591 | 22688191 | 116987 | AGAP1 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.122367032 | 2012 | AGAP1 | 2 | 235886699 | A | C |
| rs13065441 | NA | 23043 | TNIK | umls:C0036341 | GAD | NA | 0.005005506 | NA | TNIK | 3 | 171277546 | C | T |
| rs13194053 | 19571809 | 8969 | HIST1H2AG | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 85235 | HIST1H2AH | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 7738 | ZNF184 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 10279 | PRSS16 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.005005506 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 10786 | SLC17A3 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 8970 | HIST1H2BJ | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002638474 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 11119 | BTN3A1 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 6568 | SLC17A1 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 10385 | BTN2A2 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs13194053 | 19571809 | 11118 | BTN3A2 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.002367032 | 2009 | NA | 6 | 27176104 | T | C |
| rs1322784 | 17579608 | 27185 | DISC1 | umls:C0036341 | BeFree | In addition, evidence for association to Asperger syndrome was observed with an intragenic single nucleotide polymorphism (SNP) of DISC1 (rs1322784; P=0.0058), as well as with a three-SNP haplotype (P=0.0013) overlapping the HEP3 haplotype, that was previously observed to associate with schizophrenia in Finnish families. | 0.377872433 | 2008 | DISC1;TSNAX-DISC1 | 1 | 231793189 | G | A |
| rs13240464 | 25056061 | 83943 | IMMP2L | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | IMMP2L | 7 | 111258859 | T | C |
| rs1335258 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | NA | 9 | 118565045 | C | A |
| rs1344706 | 25162540 | 91752 | ZNF804A | umls:C0036341 | BeFree | Expression of ZNF804A in human brain and alterations in schizophrenia, bipolar disorder, and major depressive disorder: a novel transcript fetally regulated by the psychosis risk variant rs1344706. | 0.266297524 | 2014 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 23590871 | 91752 | ZNF804A | umls:C0036341 | BeFree | Association of rs1344706 in the ZNF804A gene with schizophrenia in a case/control sample from Indonesia. | 0.266297524 | 2013 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 18677311 | 91752 | ZNF804A | umls:C0036341 | GWASCAT | Identification of loci associated with schizophrenia by genome-wide association and follow-up. | 0.266297524 | 2008 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22042765 | 91752 | ZNF804A | umls:C0036341 | BeFree | Genome-wide association studies identified the single nucleotide polymorphism rs1344706 in ZNF804A as a common risk-variant for schizophrenia and bipolar disorder. | 0.266297524 | 2013 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 20368704 | 79513 | OR10R1P | umls:C0036341 | BeFree | The meta-analysis provided evidence for association between rs1344706 that surpasses widely accepted benchmarks of significance by several orders of magnitude for both schizophrenia (P=2.5 × 10(-11), odds ratio (OR) 1.10, 95% confidence interval 1.07-1.14) and schizophrenia and bipolar disorder combined (P=4.1 × 10(-13), OR 1.11, 95% confidence interval 1.07-1.14). | 0.000271442 | 2011 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 25065377 | 91752 | ZNF804A | umls:C0036341 | BeFree | ZNF804A genetic variation (rs1344706) affects brain grey but not white matter in schizophrenia and healthy subjects. | 0.266297524 | 2015 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 21988329 | 91752 | ZNF804A | umls:C0036341 | BeFree | A polymerase chain reaction-restriction fragment length polymorphism method for screening ZNF804A gene polymorphism (rs1344706) in patients with schizophrenia: a significant association. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 19407193 | 91752 | ZNF804A | umls:C0036341 | BeFree | Recently, the first common genetic variant associated on a genome-wide level with schizophrenia and possibly bipolar disorder was discovered in ZNF804A (rs1344706). | 0.266297524 | 2009 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 24636489 | 91752 | ZNF804A | umls:C0036341 | BeFree | The rs1344706 single nucleotide polymorphism within intron 2 of the ZNF804A gene is strongly associated with schizophrenia and bipolar disorder. | 0.266297524 | 2014 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 23147122 | 91752 | ZNF804A | umls:C0036341 | BeFree | No association of ZNF804A rs1344706 with white matter integrity in schizophrenia: a tract-based spatial statistics study. | 0.266297524 | 2013 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22425527 | 91752 | ZNF804A | umls:C0036341 | BeFree | Association analysis of ZNF804A (zinc finger protein 804A) rs1344706 with therapeutic response to atypical antipsychotics in first-episode Chinese patients with schizophrenia. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22775511 | 91752 | ZNF804A | umls:C0036341 | BeFree | ZNF804A rs1344706 variant and schizophrenia in a Romanian population from Cluj Napoca. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22871346 | 91752 | ZNF804A | umls:C0036341 | BeFree | Further evidence for the association of genetic variants of ZNF804A with schizophrenia and a meta-analysis for genome-wide significance variant rs1344706. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 25921517 | 91752 | ZNF804A | umls:C0036341 | BeFree | ZNF804A rs1344706 is associated with cortical thickness, surface area, and cortical volume of the unmedicated first episode schizophrenia and healthy controls. | 0.266297524 | 2015 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 24066410 | 91752 | ZNF804A | umls:C0036341 | BeFree | Evaluation of the relationship between the ZNF804A single nucleotide polymorphism rs1344706 A/C variant and schizophrenia subtype in Han Chinese patients. | 0.266297524 | 2013 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 23351715 | 91752 | ZNF804A | umls:C0036341 | BeFree | Evidence from large GWAS indicates that the single nucleotide polymorphism (SNP) rs1344706 in the zinc-finger protein 804A gene (ZNF804A) is associated with psychotic disorders including bipolar disorder and schizophrenia. | 0.266297524 | 2013 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 25526981 | 91752 | ZNF804A | umls:C0036341 | BeFree | Association between rs1344706 of ZNF804A and schizophrenia: a meta-analysis. | 0.266297524 | 2014 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22781169 | 91752 | ZNF804A | umls:C0036341 | BeFree | This finding might be consistent with a previously reported ZNF804A association in schizophrenia, in which patients carrying the schizophrenia-risk allele at rs1344706 showed a better performance in two memory tests. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 22373944 | 91752 | ZNF804A | umls:C0036341 | BeFree | ZNF804A gene polymorphism rs1344706 has been suggested as the most compelling case of a candidate gene for schizophrenia by a genome-wide association study and several replication studies. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 21911029 | 91752 | ZNF804A | umls:C0036341 | BeFree | Association of the ZNF804A gene polymorphism rs1344706 with white matter density changes in Chinese schizophrenia. | 0.266297524 | 2012 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 24685285 | 91752 | ZNF804A | umls:C0036341 | BeFree | In light of the strong DTI evidence for white matter microstructural abnormalities in schizophrenia, the current results implicate a potential mechanism for schizophrenia risk formation by ZNF804A rs1344706 genotype. | 0.266297524 | 2014 | ZNF804A | 2 | 184913701 | A | C |
| rs1344706 | 18677311 | 91752 | ZNF804A | umls:C0036341 | GAD | [Identification of loci associated with schizophrenia by genome-wide association and follow-up.] | 0.266297524 | 2008 | ZNF804A | 2 | 184913701 | A | C |
| rs13447324 | NA | 4160 | MC4R | umls:C0036341 | CLINVAR | NA | 0.120271442 | NA | MC4R | 18 | 60372245 | G | T |
| rs138354054 | 10889555 | 1814 | DRD3 | umls:C0036341 | BeFree | Mutation and association analysis of the 5' region of the dopamine D3 receptor gene in schizophrenia patients: identification of the Ala38Thr polymorphism and suggested association between DRD3 haplotypes and schizophrenia. | 0.264470765 | 2000 | DRD3 | 3 | 114171881 | C | T |
| rs138880 | 23894747 | 23774 | BRD1 | umls:C0036341 | GWASCAT | A comprehensive family-based replication study of schizophrenia genes. | 0.125819831 | 2013 | BRD1 | 22 | 49824963 | A | C |
| rs139883 | 23456610 | 6663 | SOX10 | umls:C0036341 | BeFree | SOX10 rs139883 polymorphism is associated with the age of onset in schizophrenia. | 0.009629949 | 2013 | POLR2F;SOX10;LOC105373026 | 22 | 37973020 | C | T |
| rs139887 | 22640896 | 6663 | SOX10 | umls:C0036341 | BeFree | In conclusion, the SOX10 rs139887 polymorphism was related to the development of schizophrenia in a gender-specific manner, and may be a significant genetic marker for managing subgroups and etiological clues in schizophrenia. | 0.009629949 | 2012 | POLR2F;SOX10;LOC105373026 | 22 | 37975389 | G | C |
| rs139887 | 23456610 | 6736 | SRY | umls:C0036341 | BeFree | Our previous study showed that a single nucleotide polymorphism (SNP) rs139887 in sex-determining region Y-box 10 (SOX10) gene was associated with the age of onset in schizophrenia. | 0.000814326 | 2013 | POLR2F;SOX10;LOC105373026 | 22 | 37975389 | G | C |
| rs139887 | 22640896 | 6736 | SRY | umls:C0036341 | BeFree | A single nucleotide polymorphism (SNP) rs139887 in sex-determining region Y-box 10 (SOX10), a candidate gene for schizophrenia, was suggested to be associated with schizophrenia although inconsistent results had been reported. | 0.000814326 | 2012 | POLR2F;SOX10;LOC105373026 | 22 | 37975389 | G | C |
| rs140505938 | 25056061 | 56957 | OTUD7B | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | LOC105371427 | 1 | 150059494 | C | T |
| rs1411832 | 25608650 | 86123 | YWHAZP5 | umls:C0036341 | BeFree | On associating quantitative DMS-TC with interactive variables of groups × genotype, one SNP (rs1411832), located downstream of YWHAZP5 in chromosome 10, was found to be associated with the working memory deficit in schizophrenia patients with lowest p-value (p = 2.02 × 10(-7)). | 0.000271442 | 2015 | LOC105378469 | 10 | 106126497 | C | T |
| rs1412115 | 21682944 | 8829 | NRP1 | umls:C0036341 | GAD | [DOCK4 and CEACAM21 as novel schizophrenia candidate genes in the Jewish population.] | 0.005005506 | 2012 | NA | 10 | 33799125 | T | C |
| rs1421292 | 18023149 | 282706 | DAOA-AS1 | umls:C0036341 | BeFree | Of 15 single nucleotide polymorphisms (SNPs) analyzed in the 95-kb G72/G30 gene region, M18/rs947267 and M22/rs778293 showed association with SCZ in Asians, and M24/rs1421292 with SCZ in Europeans. | 0.022870638 | 2008 | NA | 13 | 105545886 | T | A |
| rs14403 | 23974872 | 10000 | AKT3 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | AKT3;SDCCAG8 | 1 | 243500591 | C | T |
| rs14403 | 23974872 | 10806 | SDCCAG8 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.122638474 | 2013 | AKT3;SDCCAG8 | 1 | 243500591 | C | T |
| rs1468412 | 25209194 | 5297 | PI4KA | umls:C0036341 | BeFree | Gene-gene interaction analyses yielded promising leads, including an observed synergistic effect between PI4KA_rs165854 and GRM3_rs1468412 polymorphisms and incomplete antipsychotic response in schizophrenia patients with low severity of illness (OR = 12.4; 95%CI = 3.69-41.69). | 0.005819831 | 2014 | GRM3 | 7 | 86804135 | A | T |
| rs1468412 | 25209194 | 2913 | GRM3 | umls:C0036341 | BeFree | Gene-gene interaction analyses yielded promising leads, including an observed synergistic effect between PI4KA_rs165854 and GRM3_rs1468412 polymorphisms and incomplete antipsychotic response in schizophrenia patients with low severity of illness (OR = 12.4; 95%CI = 3.69-41.69). | 0.301609676 | 2014 | GRM3 | 7 | 86804135 | A | T |
| rs1501357 | 25056061 | 348980 | HCN1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | HCN1 | 5 | 45364773 | T | C |
| rs1502844 | 19571808 | 133482 | SLCO6A1 | umls:C0036341 | GAD | [Common variants conferring risk of schizophrenia.] | 0.123452799 | 2009 | NA | 5 | 102523613 | C | T |
| rs151222 | 18347602 | 116285 | ACSM1 | umls:C0036341 | GAD | [Genomewide association for schizophrenia in the CATIE study: results of stage 1.] | 0.005276948 | 2008 | ACSM1 | 16 | 20663170 | G | C |
| rs1538774 | 23974872 | 10806 | SDCCAG8 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.122638474 | 2013 | SDCCAG8 | 1 | 243381525 | C | G |
| rs1544410 | 16634022 | 7421 | VDR | umls:C0036341 | BeFree | Four single-nucleotide polymorphisms (SNPs; rs10735810/FokI, rs1544410/BsmI, rs7975232/ApaI, and rs731236/TaqI) in the VDR gene were genotyped in 179 individuals with schizophrenia and 189 healthy controls. | 0.000542884 | 2006 | VDR;LOC105369749 | 12 | 47846052 | C | T |
| rs1549637 | 15999343 | 8605 | PLA2G4C | umls:C0036341 | BeFree | The present study detected three single nucleotide polymorphisms (SNPs), BanISNP at the PLA2G4A locus, rs1648833 at the PLA2G4B locus, and rs1549637 at the PLA2G4C locus, to investigate a genetic association between the cytosolic PLA2 (cPLA2) genes and schizophrenia. | 0.002638474 | 2005 | PLA2G4C | 19 | 48048700 | A | T |
| rs1549637 | 15999343 | 100137049 | PLA2G4B | umls:C0036341 | BeFree | The present study detected three single nucleotide polymorphisms (SNPs), BanISNP at the PLA2G4A locus, rs1648833 at the PLA2G4B locus, and rs1549637 at the PLA2G4C locus, to investigate a genetic association between the cytosolic PLA2 (cPLA2) genes and schizophrenia. | 0.000271442 | 2005 | PLA2G4C | 19 | 48048700 | A | T |
| rs1569686 | 24859147 | 1789 | DNMT3B | umls:C0036341 | BeFree | DNMT3B rs1569686 (genotype P = 0.027, allele P = 0.033) was found to be associated with early onset of schizophrenia and also with family history and early onset (genotype P = 0.009). | 0.005005506 | 2014 | DNMT3B | 20 | 32779273 | G | C,T |
| rs1572299 | 19571808 | 7099 | TLR4 | umls:C0036341 | GAD | [Common variants conferring risk of schizophrenia.] | 0.005005506 | 2009 | NA | 9 | 118584139 | T | C |
| rs1574192 | 19023125 | 150677 | OTOS | umls:C0036341 | GAD | [Combining imaging and genetic data from a GWAS identified genes related to forebrain development and stress response, already implicated in schizophrenic dysfunction, as affecting prefrontal efficiency. Although the identified genes require confirmation i] | 0.002367032 | 2009 | NA | 2 | 240369088 | G | A |
| rs1605834 | NA | 338 | APOB | umls:C0036341 | GAD | NA | 0.004734064 | NA | NA | 2 | 22353228 | A | G |
| rs16147 | 23277265 | 4852 | NPY | umls:C0036341 | BeFree | Because NPY is a potent orexigenic peptide stimulating food intake, and genetic variation of the gene has been shown to influence development of obesity, we investigated the impact of NPY polymorphisms on antipsychotic-induced BWG.We analyzed 5 polymorphisms in the NPY gene (rs10551063, rs16147, rs5573, rs5574, and rs16475) in schizophrenia subjects (n = 226), treated mostly with clozapine and olanzapine for up to 14 weeks. | 0.015721222 | 2013 | NPY | 7 | 24283791 | T | C |
| rs1625579 | 25241074 | 406928 | MIR137 | umls:C0036341 | BeFree | Lack of association between microRNA-137 SNP rs1625579 and schizophrenia in a replication study of Han Chinese. | 0.127057489 | 2014 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 26123324 | 406928 | MIR137 | umls:C0036341 | BeFree | Genome-wide association studies implicate the MIR137HG risk variant rs1625579 (MIR137HGrv) within the host gene for microRNA-137 as a potential regulator of schizophrenia susceptibility. | 0.127057489 | 2015 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 25250332 | 406928 | MIR137 | umls:C0036341 | BeFree | Both genome wide association study (GWAS) and biochemical studies of Caucasian populations indicate a robust association between the miR-137 genetic variant rs1625579 and schizophrenia, but inconsistent results have been reported. | 0.127057489 | 2014 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 25395183 | 400765 | MIR137HG | umls:C0036341 | BeFree | The most robust finding has been reported for rs1625579 located in MIR137HG, which was associated with schizophrenia on a genome-wide level. | 0.120814326 | 2014 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 22883350 | 406928 | MIR137 | umls:C0036341 | BeFree | In a mega analysis of genome-wide association study (GWAS) of schizophrenia (SZ) and bipolar disorders (BP), a polymorphism (rs1625579) located in the primary transcript of a miRNA gene, hsa-miR-137, was reported to be strongly associated with SZ. | 0.127057489 | 2012 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 25044277 | 406928 | MIR137 | umls:C0036341 | BeFree | The miR-137 schizophrenia susceptibility variant rs1625579 does not predict variability in brain volume in a sample of schizophrenic patients and healthy individuals. | 0.127057489 | 2014 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 24361663 | 406928 | MIR137 | umls:C0036341 | BeFree | By grouping 81 healthy participants as carrier or non-carriers of the MIR137 rs1625579 risk allele associated with schizophrenia, we investigated MIR137's effects on altered cortical response during an fMRI face processing task and altered functional connectivity using the amygdala as a seed region. | 0.127057489 | 2013 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 26123324 | 400765 | MIR137HG | umls:C0036341 | BeFree | MIR137HG risk variant rs1625579 genotype is related to corpus callosum volume in schizophrenia. | 0.120814326 | 2015 | MIR137HG | 1 | 98037378 | G | T |
| rs1625579 | 21926974 | 400765 | MIR137HG | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.120814326 | 2011 | MIR137HG | 1 | 98037378 | G | T |
| rs1633445 | 18075473 | 29801 | ZDHHC8 | umls:C0036341 | BeFree | For further support from within the Han Chinese ethnic group, we selected two single nucleotide polymorphisms (SNP) located at the distal 5'-end (rs1633445; intron 10 of HpaII tiny fragments locus 9C, HTF9C) and the intron 4 (rs175174) of ZDHHC8 gene to test if these were associated with schizophrenia in a study sample of Taiwan. | 0.097188052 | 2007 | TRMT2A | 22 | 20113073 | T | A,C |
| rs1635 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 222698 | NKAPL | umls:C0036341 | GAD | [We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 x 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 x 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 x 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 x 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 x 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 x 10(-11), OR = 1.27).] | 0.243181358 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 222698 | NKAPL | umls:C0036341 | GWASCAT | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | GWASCAT | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs1635 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | NKAPL;ZKSCAN4 | 6 | 28259826 | C | A |
| rs16475 | 23277265 | 4852 | NPY | umls:C0036341 | BeFree | Because NPY is a potent orexigenic peptide stimulating food intake, and genetic variation of the gene has been shown to influence development of obesity, we investigated the impact of NPY polymorphisms on antipsychotic-induced BWG.We analyzed 5 polymorphisms in the NPY gene (rs10551063, rs16147, rs5573, rs5574, and rs16475) in schizophrenia subjects (n = 226), treated mostly with clozapine and olanzapine for up to 14 weeks. | 0.015721222 | 2013 | NPY | 7 | 24291867 | A | G |
| rs1648833 | 15999343 | 100137049 | PLA2G4B | umls:C0036341 | BeFree | The present study detected three single nucleotide polymorphisms (SNPs), BanISNP at the PLA2G4A locus, rs1648833 at the PLA2G4B locus, and rs1549637 at the PLA2G4C locus, to investigate a genetic association between the cytosolic PLA2 (cPLA2) genes and schizophrenia. | 0.000271442 | 2005 | JMJD7-PLA2G4B;PLA2G4B | 15 | 41842325 | C | T |
| rs1648833 | 15999343 | 8605 | PLA2G4C | umls:C0036341 | BeFree | The present study detected three single nucleotide polymorphisms (SNPs), BanISNP at the PLA2G4A locus, rs1648833 at the PLA2G4B locus, and rs1549637 at the PLA2G4C locus, to investigate a genetic association between the cytosolic PLA2 (cPLA2) genes and schizophrenia. | 0.002638474 | 2005 | JMJD7-PLA2G4B;PLA2G4B | 15 | 41842325 | C | T |
| rs165599 | 23598060 | 1312 | COMT | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.345417491 | 2013 | ARVCF;COMT | 22 | 19969258 | G | A |
| rs165599 | 19329282 | 1312 | COMT | umls:C0036341 | BeFree | A common functional polymorphism, Val108/158Met (rs4680), and haplotypes rs737865-rs4680-rs165599 in the Catechol-O-methyltransferase gene (COMT) have been extensively examined for association to schizophrenia; however, results of replication studies have been inconsistent. | 0.345417491 | 2009 | ARVCF;COMT | 22 | 19969258 | G | A |
| rs165599 | 23598060 | 51008 | ASCC1 | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.012486326 | 2013 | ARVCF;COMT | 22 | 19969258 | G | A |
| rs165599 | 23295417 | 1312 | COMT | umls:C0036341 | BeFree | Association study between the rs165599 catechol-O-methyltransferase genetic polymorphism and schizophrenia in a Brazilian sample. | 0.345417491 | 2012 | ARVCF;COMT | 22 | 19969258 | G | A |
| rs165655 | 15861775 | 1326 | MAP3K8 | umls:C0036341 | BeFree | The PCR-based restriction fragment length polymorphism (PCR-RFLP) analysis was used to detect three single nucleotide polymorphisms (SNPs), rs165655 (A/G base change) and rs165815 (C/T base change) present in the ARVCF (armadillo repeat gene deletion in velocardiofacial syndrome) locus, and rs756656 (A/C base change) in the LOC128979 (expressed sequence tags, EST) locus, among 100 Chinese family trios consisting of fathers, mothers and affected offspring with schizophrenia. | 0.000814326 | 2005 | ARVCF;COMT | 22 | 19970240 | G | A |
| rs165774 | 22208661 | 1312 | COMT | umls:C0036341 | BeFree | It is possible that the rs165774 SNP, in combination with rs4680, results in a common molecular variant of COMT that contributes to schizophrenia and alcohol dependence susceptibility. | 0.345417491 | 2011 | COMT | 22 | 19965038 | G | A |
| rs165815 | 15861775 | 1326 | MAP3K8 | umls:C0036341 | BeFree | The PCR-based restriction fragment length polymorphism (PCR-RFLP) analysis was used to detect three single nucleotide polymorphisms (SNPs), rs165655 (A/G base change) and rs165815 (C/T base change) present in the ARVCF (armadillo repeat gene deletion in velocardiofacial syndrome) locus, and rs756656 (A/C base change) in the LOC128979 (expressed sequence tags, EST) locus, among 100 Chinese family trios consisting of fathers, mothers and affected offspring with schizophrenia. | 0.000814326 | 2005 | ARVCF | 22 | 19971950 | C | T |
| rs165854 | 25209194 | 5297 | PI4KA | umls:C0036341 | BeFree | Gene-gene interaction analyses yielded promising leads, including an observed synergistic effect between PI4KA_rs165854 and GRM3_rs1468412 polymorphisms and incomplete antipsychotic response in schizophrenia patients with low severity of illness (OR = 12.4; 95%CI = 3.69-41.69). | 0.005819831 | 2014 | PI4KA | 22 | 20813499 | G | A |
| rs165854 | 25209194 | 2913 | GRM3 | umls:C0036341 | BeFree | Gene-gene interaction analyses yielded promising leads, including an observed synergistic effect between PI4KA_rs165854 and GRM3_rs1468412 polymorphisms and incomplete antipsychotic response in schizophrenia patients with low severity of illness (OR = 12.4; 95%CI = 3.69-41.69). | 0.301609676 | 2014 | PI4KA | 22 | 20813499 | G | A |
| rs16885 | 9187671 | 6310 | ATXN1 | umls:C0036341 | BeFree | We have studied the coding region of the SCA1 gene (exons 8 and 9) in samples from schizophrenia patients and have identified two amino-acid variants (S186C and P754S) and three nucleotide polymorphisms (1409A/G, 1865T/C and 2150A/G). | 0.010553895 | 1997 | ATXN1 | 6 | 16306520 | G | C,A |
| rs16887244 | 22037555 | 27257 | LSM1 | umls:C0036341 | GAD | [Common variants on 8p12 and 1q24.2 confer risk of schizophrenia.] | 0.122367032 | 2011 | LSM1 | 8 | 38173827 | A | G |
| rs16887244 | 22037555 | 27257 | LSM1 | umls:C0036341 | GWASCAT | Common variants on 8p12 and 1q24.2 confer risk of schizophrenia. | 0.122367032 | 2011 | LSM1 | 8 | 38173827 | A | G |
| rs16897515 | 23894747 | 94026 | POM121L2 | umls:C0036341 | GWASCAT | A comprehensive family-based replication study of schizophrenia genes. | 0.122367032 | 2013 | POM121L2;LOC105375107 | 6 | 27310241 | C | A |
| rs16915157 | 22688191 | 288 | ANK3 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.12853425 | 2012 | ANK3 | 10 | 60586880 | C | T |
| rs16915157 | 21926974 | 288 | ANK3 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.12853425 | 2011 | ANK3 | 10 | 60586880 | C | T |
| rs16944 | 16905295 | 3557 | IL1RN | umls:C0036341 | BeFree | Association study of IL10, IL1beta, and IL1RN and schizophrenia using tag SNPs from a comprehensive database: suggestive association with rs16944 at IL1beta. | 0.008729747 | 2006 | IL1B | 2 | 112837290 | A | G |
| rs16944 | 16905295 | 3586 | IL10 | umls:C0036341 | BeFree | Association study of IL10, IL1beta, and IL1RN and schizophrenia using tag SNPs from a comprehensive database: suggestive association with rs16944 at IL1beta. | 0.027642259 | 2006 | IL1B | 2 | 112837290 | A | G |
| rs16970218 | 21563301 | 4099 | MAG | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.013254501 | 2011 | NA | 19 | 35316853 | A | G |
| rs16970218 | 21563301 | 57142 | RTN4 | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.13926983 | 2011 | NA | 19 | 35316853 | A | G |
| rs16977195 | 18347602 | 123624 | AGBL1 | umls:C0036341 | GAD | [Genomewide association for schizophrenia in the CATIE study: results of stage 1.] | 0.002367032 | 2008 | AGBL1 | 15 | 86441009 | A | G |
| rs1700 | 17849003 | 406989 | MIR206 | umls:C0036341 | BeFree | We found nominal association between brain-expressed miRNAs and schizophrenia for rs17578796 and rs1700 located in mir-206 and mir-198 respectively. | 0.002638474 | 2007 | FSTL1;MIR198 | 3 | 120395790 | C | T |
| rs1700 | 17849003 | 5018 | OXA1L | umls:C0036341 | BeFree | Two SNPs rs17578796 and rs1700 in hsa-mir-206 (mir-206) and hsa-mit-198 (mir-198) showed nominal significant allelic association to schizophrenia in the Danish and Norwegian sample respectively (P = 0.0021 & p = 0.038), of which only rs17578796 was significant in the joint sample. | 0.000542884 | 2007 | FSTL1;MIR198 | 3 | 120395790 | C | T |
| rs1700 | 17849003 | 406975 | MIR198 | umls:C0036341 | BeFree | We found nominal association between brain-expressed miRNAs and schizophrenia for rs17578796 and rs1700 located in mir-206 and mir-198 respectively. | 0.002638474 | 2007 | FSTL1;MIR198 | 3 | 120395790 | C | T |
| rs1702294 | 25056061 | 400765 | MIR137HG | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.120814326 | 2014 | MIR137HG | 1 | 98036428 | T | C |
| rs171748 | 23974872 | 101928630 | CTC-436P18.1 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | CTC-436P18.1;LOC105378992 | 5 | 61203304 | A | G |
| rs17176973 | NA | 1611 | DAP | umls:C0036341 | GAD | NA | 0.002638474 | NA | NA | 5 | 10811362 | C | G |
| rs17194490 | 25056061 | 152330 | CNTN4 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122367032 | 2014 | CNTN4 | 3 | 2506102 | G | A,T |
| rs174576 | 24819575 | 421 | ARVCF | umls:C0036341 | BeFree | Carriage of the minor allele at rs2518824 in the armadillo repeat gene deleted in velocardiofacial syndrome (ARVCF) gene, which has been linked to neuronal migration and schizophrenia, and rs174576 in the fatty acid desaturase 2 gene, which encodes a rate-limiting enzyme for endogenous long chain polyunsaturated fatty acid synthesis and has been linked to intelligence, was associated with white matter abnormality measured in vivo using diffusion tensor imaging (P = .0009 and P = .0019, respectively). | 0.003724241 | 2014 | FADS2 | 11 | 61836038 | C | A |
| rs174576 | 24819575 | 9856 | KIAA0319 | umls:C0036341 | BeFree | Carriage of the minor allele at rs2518824 in the armadillo repeat gene deleted in velocardiofacial syndrome (ARVCF) gene, which has been linked to neuronal migration and schizophrenia, and rs174576 in the fatty acid desaturase 2 gene, which encodes a rate-limiting enzyme for endogenous long chain polyunsaturated fatty acid synthesis and has been linked to intelligence, was associated with white matter abnormality measured in vivo using diffusion tensor imaging (P = .0009 and P = .0019, respectively). | 0.004071628 | 2014 | FADS2 | 11 | 61836038 | C | A |
| rs17512836 | 21926974 | 6925 | TCF4 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.216525617 | 2011 | TCF4 | 18 | 55527730 | T | C |
| rs17512836 | 21926974 | 6925 | TCF4 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.216525617 | 2011 | TCF4 | 18 | 55527730 | T | C |
| rs17512836 | 24718684 | 6934 | TCF7L2 | umls:C0036341 | BeFree | The analyses on the 28 individual SNPs previously associated with schizophrenia found that two SNPs in TCF4 returned a significant association with the SPEQ Paranoia dimension, rs17512836 (p-value = 2.57×10⁻⁴) and rs9960767 (p-value = 6.23×10⁻⁴). | 0.009153079 | 2014 | TCF4 | 18 | 55527730 | T | C |
| rs175174 | 18075473 | 29801 | ZDHHC8 | umls:C0036341 | BeFree | For further support from within the Han Chinese ethnic group, we selected two single nucleotide polymorphisms (SNP) located at the distal 5'-end (rs1633445; intron 10 of HpaII tiny fragments locus 9C, HTF9C) and the intron 4 (rs175174) of ZDHHC8 gene to test if these were associated with schizophrenia in a study sample of Taiwan. | 0.097188052 | 2007 | ZDHHC8 | 22 | 20140031 | A | G |
| rs175174 | 15992527 | 29801 | ZDHHC8 | umls:C0036341 | BeFree | No association between the putative functional ZDHHC8 single nucleotide polymorphism rs175174 and schizophrenia in large European samples. | 0.097188052 | 2005 | ZDHHC8 | 22 | 20140031 | A | G |
| rs17578796 | 17849003 | 406975 | MIR198 | umls:C0036341 | BeFree | We found nominal association between brain-expressed miRNAs and schizophrenia for rs17578796 and rs1700 located in mir-206 and mir-198 respectively. | 0.002638474 | 2007 | MIR206 | 6 | 52144499 | C | T |
| rs17578796 | 17849003 | 5018 | OXA1L | umls:C0036341 | BeFree | Two SNPs rs17578796 and rs1700 in hsa-mir-206 (mir-206) and hsa-mit-198 (mir-198) showed nominal significant allelic association to schizophrenia in the Danish and Norwegian sample respectively (P = 0.0021 & p = 0.038), of which only rs17578796 was significant in the joint sample. | 0.000542884 | 2007 | MIR206 | 6 | 52144499 | C | T |
| rs17578796 | 17849003 | 406989 | MIR206 | umls:C0036341 | BeFree | We found nominal association between brain-expressed miRNAs and schizophrenia for rs17578796 and rs1700 located in mir-206 and mir-198 respectively. | 0.002638474 | 2007 | MIR206 | 6 | 52144499 | C | T |
| rs17594526 | 19571811 | 6925 | TCF4 | umls:C0036341 | GAD | [Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.] | 0.216525617 | 2009 | TCF4 | 18 | 55391007 | C | T |
| rs17594526 | 19571811 | 6925 | TCF4 | umls:C0036341 | GWASCAT | Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. | 0.216525617 | 2009 | TCF4 | 18 | 55391007 | C | T |
| rs17603876 | 25579050 | 2917 | GRM7 | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.014906897 | 2014 | NRG1 | 8 | 31810888 | A | G |
| rs17603876 | 25579050 | 3703 | STT3A | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.122638474 | 2014 | NRG1 | 8 | 31810888 | A | G |
| rs17691888 | 23974872 | 783 | CACNB2 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.120542884 | 2013 | CACNB2 | 10 | 18445599 | G | A |
| rs17785382 | NA | 7804 | LRP8 | umls:C0036341 | GAD | NA | 0.002909916 | NA | LRP8;LOC100507564 | 1 | 53242281 | A | G |
| rs1794068 | 20347268 | 3557 | IL1RN | umls:C0036341 | BeFree | Neither combined nor stratified analyses found any association of the rs1800587 (IL1A gene; T-889C) or rs1794068 (IL1RA Gene; IL1RN_86 bp; T/C) with schizophrenia susceptibility. | 0.008729747 | 2010 | IL1RN | 2 | 113128926 | G | A |
| rs1794068 | 20347268 | 3554 | IL1R1 | umls:C0036341 | BeFree | Neither combined nor stratified analyses found any association of the rs1800587 (IL1A gene; T-889C) or rs1794068 (IL1RA Gene; IL1RN_86 bp; T/C) with schizophrenia susceptibility. | 0.002638474 | 2010 | IL1RN | 2 | 113128926 | G | A |
| rs1799732 | 25504812 | 1813 | DRD2 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.291131658 | 2014 | DRD2;LOC105369500 | 11 | 113475529 | - | G |
| rs1799732 | 25504812 | 255239 | ANKK1 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.009087065 | 2014 | DRD2;LOC105369500 | 11 | 113475529 | - | G |
| rs1799945 | 21643746 | 7018 | TF | umls:C0036341 | BeFree | The aim of this study was to investigate the possible influence of hemochromatosis gene mutations (HFE-C282Y and H63D) and transferrin gene C2 variant (TF-C2) on susceptibility to schizophrenia and schizoaffective disorder and/or age at first hospital admission. | 0.01099709 | 2012 | HFE | 6 | 26090951 | C | G |
| rs1799971 | 20112002 | 4988 | OPRM1 | umls:C0036341 | BeFree | A118G polymorphism of OPRM1 gene is associated with schizophrenia. | 0.005905708 | 2010 | OPRM1 | 6 | 154039662 | A | G |
| rs1800044 | 9734554 | 3356 | HTR2A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.341213463 | 1998 | HTR1A | 5 | 63961061 | C | A |
| rs1800044 | 9734554 | 3350 | HTR1A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.020431542 | 1998 | HTR1A | 5 | 63961061 | C | A |
| rs1800470 | 24065520 | 3558 | IL2 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.009629949 | 2013 | TGFB1 | 19 | 41353016 | G | C,A |
| rs1800470 | 24065520 | 3569 | IL6 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.127177041 | 2013 | TGFB1 | 19 | 41353016 | G | C,A |
| rs1800470 | 24065520 | 3458 | IFNG | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.001357209 | 2013 | TGFB1 | 19 | 41353016 | G | C,A |
| rs1800471 | 24065520 | 3569 | IL6 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.127177041 | 2013 | TGFB1 | 19 | 41352971 | C | G |
| rs1800471 | 24065520 | 3458 | IFNG | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.001357209 | 2013 | TGFB1 | 19 | 41352971 | C | G |
| rs1800471 | 24065520 | 3558 | IL2 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.009629949 | 2013 | TGFB1 | 19 | 41352971 | C | G |
| rs1800497 | 25504812 | 1813 | DRD2 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.291131658 | 2014 | ANKK1 | 11 | 113400106 | G | A |
| rs1800497 | 25504812 | 255239 | ANKK1 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.009087065 | 2014 | ANKK1 | 11 | 113400106 | G | A |
| rs1800497 | 25073965 | 255239 | ANKK1 | umls:C0036341 | BeFree | Identification of ANKK1 rs1800497 variant in schizophrenia: new data and meta-analysis. | 0.009087065 | 2014 | ANKK1 | 11 | 113400106 | G | A |
| rs1800544 | 22940547 | 1621 | DBH | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.024636535 | 2013 | ADRA2A | 10 | 111076745 | G | C |
| rs1800544 | 22940547 | 150 | ADRA2A | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.006362715 | 2013 | ADRA2A | 10 | 111076745 | G | C |
| rs1800544 | 22940547 | 1814 | DRD3 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.264470765 | 2013 | ADRA2A | 10 | 111076745 | G | C |
| rs1800544 | 22940547 | 6616 | SNAP25 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.098088254 | 2013 | ADRA2A | 10 | 111076745 | G | C |
| rs1800562 | 21643746 | 7018 | TF | umls:C0036341 | BeFree | The aim of this study was to investigate the possible influence of hemochromatosis gene mutations (HFE-C282Y and H63D) and transferrin gene C2 variant (TF-C2) on susceptibility to schizophrenia and schizoaffective disorder and/or age at first hospital admission. | 0.01099709 | 2012 | HFE | 6 | 26092913 | G | A |
| rs1800566 | 18977034 | 1728 | NQO1 | umls:C0036341 | BeFree | Additive effect between quinine oxidoreductase gene (NQO1: Pro187Ser) and manganese superoxide dismutase gene (MnSOD: Ala-9Val) polymorphisms on tardive dyskinesia in patients with schizophrenia. | 0.008544182 | 2008 | NQO1 | 16 | 69711242 | G | A |
| rs1800566 | 18977034 | 7296 | TXNRD1 | umls:C0036341 | BeFree | Additive effect between quinine oxidoreductase gene (NQO1: Pro187Ser) and manganese superoxide dismutase gene (MnSOD: Ala-9Val) polymorphisms on tardive dyskinesia in patients with schizophrenia. | 0.000542884 | 2008 | NQO1 | 16 | 69711242 | G | A |
| rs1800566 | 18977034 | 8630 | HSD17B6 | umls:C0036341 | BeFree | Additive effect between quinine oxidoreductase gene (NQO1: Pro187Ser) and manganese superoxide dismutase gene (MnSOD: Ala-9Val) polymorphisms on tardive dyskinesia in patients with schizophrenia. | 0.000542884 | 2008 | NQO1 | 16 | 69711242 | G | A |
| rs1800566 | 18977034 | 6648 | SOD2 | umls:C0036341 | BeFree | Additive effect between quinine oxidoreductase gene (NQO1: Pro187Ser) and manganese superoxide dismutase gene (MnSOD: Ala-9Val) polymorphisms on tardive dyskinesia in patients with schizophrenia. | 0.017359805 | 2008 | NQO1 | 16 | 69711242 | G | A |
| rs1800587 | 20347268 | 3557 | IL1RN | umls:C0036341 | BeFree | Neither combined nor stratified analyses found any association of the rs1800587 (IL1A gene; T-889C) or rs1794068 (IL1RA Gene; IL1RN_86 bp; T/C) with schizophrenia susceptibility. | 0.008729747 | 2010 | IL1A | 2 | 112785383 | G | C,A |
| rs1800587 | 20347268 | 3554 | IL1R1 | umls:C0036341 | BeFree | Neither combined nor stratified analyses found any association of the rs1800587 (IL1A gene; T-889C) or rs1794068 (IL1RA Gene; IL1RN_86 bp; T/C) with schizophrenia susceptibility. | 0.002638474 | 2010 | IL1A | 2 | 112785383 | G | C,A |
| rs1800629 | 23453739 | 7124 | TNF | umls:C0036341 | BeFree | Lack of association between TNFα rs1800629 polymorphism and schizophrenia risk: a meta-analysis. | 0.178885326 | 2013 | TNF | 6 | 31575254 | G | A |
| rs1800795 | 24065520 | 3458 | IFNG | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.001357209 | 2013 | IL6;LOC541472 | 7 | 22727026 | C | G |
| rs1800795 | 24065520 | 3569 | IL6 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.127177041 | 2013 | IL6;LOC541472 | 7 | 22727026 | C | G |
| rs1800795 | 24065520 | 3558 | IL2 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.009629949 | 2013 | IL6;LOC541472 | 7 | 22727026 | C | G |
| rs1800955 | 17556853 | 1815 | DRD4 | umls:C0036341 | BeFree | No association between dopamine D4 receptor gene -521 C/T polymorphism and tardive dyskinesia in schizophrenia. | 0.226108077 | 2007 | DRD4 | 11 | 636784 | T | C |
| rs1800955 | 17763983 | 1815 | DRD4 | umls:C0036341 | BeFree | Linkage between the DRD4 and COMT genes and cognitive measures characterizing verbal memory, executive functions, and associative processes was studied in 150 patients with schizophrenia, 83 of their relatives, and 118 mentally healthy subjects without any family history of psychoses, with the aim of detecting the main effects of the polymorphic markers -809G/A and -521C/T (DRD4) and Val158Met (COMT) when present individually and together. | 0.226108077 | 2007 | DRD4 | 11 | 636784 | T | C |
| rs1801028 | 17455212 | 1812 | DRD1 | umls:C0036341 | BeFree | One hundred thirty one outpatients in stable remission meeting the DSMIV criteria for schizophrenia spectrum disorders and receiving long-term maintenance therapy with haloperidol, fluphenazine, zuclopenthixole, or risperidone were genotyped for DRD1 A-48G, DRD2 Ins-141CDel, and DRD2 Ser311Cys polymorphisms. | 0.151823507 | 2007 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 15802092 | 1813 | DRD2 | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.291131658 | 2005 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 8723039 | 1813 | DRD2 | umls:C0036341 | BeFree | Further association study on dopamine D2 receptor variant S311C in schizophrenia and affective disorders. | 0.291131658 | 1996 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 9259374 | 1813 | DRD2 | umls:C0036341 | BeFree | Linkage and association of a functional DRD2 variant [Ser311Cys] and DRD2 markers to alcoholism, substance abuse and schizophrenia in Southwestern American Indians. | 0.291131658 | 1997 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 18715757 | 1813 | DRD2 | umls:C0036341 | BeFree | The Cys allele of the DRD2 Ser311Cys polymorphism has a dominant effect on risk for schizophrenia: evidence from fixed- and random-effects meta-analyses. | 0.291131658 | 2008 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 17455212 | 1813 | DRD2 | umls:C0036341 | BeFree | One hundred thirty one outpatients in stable remission meeting the DSMIV criteria for schizophrenia spectrum disorders and receiving long-term maintenance therapy with haloperidol, fluphenazine, zuclopenthixole, or risperidone were genotyped for DRD1 A-48G, DRD2 Ins-141CDel, and DRD2 Ser311Cys polymorphisms. | 0.291131658 | 2007 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 20716857 | 1813 | DRD2 | umls:C0036341 | BeFree | Advanced research on dopamine signaling to develop drugs for the treatment of mental disorders: Ser311Cys polymorphisms of the dopamine D2-receptor gene and schizophrenia. | 0.291131658 | 2010 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 9339651 | 1813 | DRD2 | umls:C0036341 | BeFree | Ser-311-Cys polymorphism of the dopamine D2 receptor gene and schizophrenia--an analysis of schizophrenic patients in Fukuoka. | 0.291131658 | 1997 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 9850987 | 1813 | DRD2 | umls:C0036341 | BeFree | Dopamine receptor D2 Ser/Cys311 variant associated with disorganized symptomatology of schizophrenia. | 0.291131658 | 1998 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 9187010 | 1813 | DRD2 | umls:C0036341 | BeFree | No association of the Ser/Cys311 DRD2 molecular variant with schizophrenia using a classical case control study and the haplotype relative risk. | 0.291131658 | 1997 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 16402354 | 1813 | DRD2 | umls:C0036341 | BeFree | The Cys allele of the DRD2 Ser311Cys polymorphism has a dominant effect on risk for schizophrenia: evidence from fixed- and random-effects meta-analyses. | 0.291131658 | 2006 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 25504812 | 255239 | ANKK1 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.009087065 | 2014 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 25504812 | 1813 | DRD2 | umls:C0036341 | BeFree | Association between DRD2 (rs1799732 and rs1801028) and ANKK1 (rs1800497) polymorphisms and schizophrenia: a meta-analysis. | 0.291131658 | 2014 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 7914079 | 1813 | DRD2 | umls:C0036341 | BeFree | Mismatch PCR RFLP detection of DRD2 Ser311Cys polymorphism and schizophrenia. | 0.291131658 | 1994 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 22370928 | 1813 | DRD2 | umls:C0036341 | BeFree | Association between Ser311Cys polymorphism in the dopamine D2 receptor gene and schizophrenia risk: a meta-analysis in Asian populations. | 0.291131658 | 2012 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 12707934 | 1813 | DRD2 | umls:C0036341 | BeFree | Dopamine D2 receptor gene Ser311Cys variant and schizophrenia: association study and meta-analysis. | 0.291131658 | 2003 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 12497614 | 1813 | DRD2 | umls:C0036341 | BeFree | We investigate the association of the polymorphism of the Ser311Cys and Ser9Gly of the dopamine D2 (DRD2) and D3 receptor (DRD3) genes respectively with TD in Chinese patients with schizophrenia. | 0.291131658 | 2003 | DRD2 | 11 | 113412762 | G | C |
| rs1801028 | 15802092 | 3356 | HTR2A | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.341213463 | 2005 | DRD2 | 11 | 113412762 | G | C |
| rs1801133 | 21980405 | 4524 | MTHFR | umls:C0036341 | BeFree | To gain insight into the neural and molecular mechanisms of error processing, we used functional MRI to examine effects of a genetic variant in methylenetetrahydrofolate reductase (MTHFR 677C>T, rs1801133) that increases risk for schizophrenia and that has been specifically associated with increased perseverative errors among patients. | 0.218796007 | 2011 | MTHFR | 1 | 11796321 | G | A |
| rs1801394 | 22813657 | 4552 | MTRR | umls:C0036341 | BeFree | Association between MTHFR C677T and A1298C, and MTRR A66G polymorphisms and susceptibility to schizophrenia in a Syrian study cohort. | 0.002995792 | 2012 | MTRR;FASTKD3 | 5 | 7870860 | A | G |
| rs1801394 | 22813657 | 4524 | MTHFR | umls:C0036341 | BeFree | Association between MTHFR C677T and A1298C, and MTRR A66G polymorphisms and susceptibility to schizophrenia in a Syrian study cohort. | 0.218796007 | 2012 | MTRR;FASTKD3 | 5 | 7870860 | A | G |
| rs1805055 | 9734554 | 3350 | HTR1A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.020431542 | 1998 | HTR2A | 13 | 46895833 | G | T,C |
| rs1805055 | 9734554 | 3356 | HTR2A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.341213463 | 1998 | HTR2A | 13 | 46895833 | G | T,C |
| rs1806201 | 10910800 | 2904 | GRIN2B | umls:C0036341 | BeFree | The findings provided no evidence of an association between schizophrenia and the 2664C/T polymorphism of the NR2B subunit gene. | 0.162449467 | 2000 | GRIN2B | 12 | 13564574 | G | A |
| rs1816071 | 14699426 | 2561 | GABRB2 | umls:C0036341 | BeFree | Five SNPs in GABRB2, namely B2I7G1584T, rs1816071, rs194072, rs252944 and rs187269, were found to be significantly associated, and their haplotypes in linkage disequilibrium, with schizophrenia. | 0.151538253 | 2004 | GABRB2 | 5 | 161332949 | T | C |
| rs1851196 | NA | 2066 | ERBB4 | umls:C0036341 | GAD | NA | 0.037881105 | NA | ERBB4 | 2 | 211605895 | G | A |
| rs1869901 | 21926974 | 5330 | PLCB2 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | PLCB2 | 15 | 40303426 | G | A |
| rs187269 | 17412563 | 2561 | GABRB2 | umls:C0036341 | BeFree | Using the multifactor-dimensionality reduction method (MDR), we found that the interactions among the rs187269C/T polymorphism in the GABRB2 gene, the -243A/G polymorphism in the GAD2 gene and the 27379C/T and 661C/T polymorphisms in the GAD1 gene revealed a significant association with schizophrenia (P<0.001). | 0.151538253 | 2007 | GABRB2 | 5 | 161329618 | A | G |
| rs187269 | 17412563 | 2572 | GAD2 | umls:C0036341 | BeFree | Using the multifactor-dimensionality reduction method (MDR), we found that the interactions among the rs187269C/T polymorphism in the GABRB2 gene, the -243A/G polymorphism in the GAD2 gene and the 27379C/T and 661C/T polymorphisms in the GAD1 gene revealed a significant association with schizophrenia (P<0.001). | 0.133635564 | 2007 | GABRB2 | 5 | 161329618 | A | G |
| rs187269 | 14699426 | 2561 | GABRB2 | umls:C0036341 | BeFree | Five SNPs in GABRB2, namely B2I7G1584T, rs1816071, rs194072, rs252944 and rs187269, were found to be significantly associated, and their haplotypes in linkage disequilibrium, with schizophrenia. | 0.151538253 | 2004 | GABRB2 | 5 | 161329618 | A | G |
| rs194072 | 14699426 | 2561 | GABRB2 | umls:C0036341 | BeFree | Five SNPs in GABRB2, namely B2I7G1584T, rs1816071, rs194072, rs252944 and rs187269, were found to be significantly associated, and their haplotypes in linkage disequilibrium, with schizophrenia. | 0.151538253 | 2004 | GABRB2 | 5 | 161331648 | A | G |
| rs1997679 | 20951386 | 84062 | DTNBP1 | umls:C0036341 | BeFree | In summary, the present results provide preliminary support for dysbindin (DTNBP1) gene variation, particularly SNPs rs1997679 and rs9370822, to be associated with the clinical phenotype of psychotic depression suggesting a possible neurobiological mechanism for an intermediate trait on the continuum between affective disorders and schizophrenia. | 0.371141589 | 2011 | DTNBP1 | 6 | 15658674 | G | A |
| rs2007044 | 25056061 | 775 | CACNA1C | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.13497291 | 2014 | CACNA1C | 12 | 2235794 | A | G |
| rs201934979 | 16490169 | 1565 | CYP2D6 | umls:C0036341 | BeFree | The C100T polymorphism of the CYP2D6 gene and the C163A polymorphism of the CYP1A2 gene may be associated with neuroleptic drug-induced tardive dyskinesia in Chinese patients with schizophrenia. | 0.051440724 | 2006 | CYP1A2 | 15 | 74749838 | C | T |
| rs201934979 | 16490169 | 1544 | CYP1A2 | umls:C0036341 | BeFree | The C100T polymorphism of the CYP2D6 gene and the C163A polymorphism of the CYP1A2 gene may be associated with neuroleptic drug-induced tardive dyskinesia in Chinese patients with schizophrenia. | 0.02801339 | 2006 | CYP1A2 | 15 | 74749838 | C | T |
| rs2021722 | 21926974 | 7726 | TRIM26 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.122367032 | 2011 | TRIM26 | 6 | 30206354 | C | T,A |
| rs2021722 | 21926974 | 7726 | TRIM26 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122367032 | 2011 | TRIM26 | 6 | 30206354 | C | T,A |
| rs2032582 | 20060871 | 5243 | ABCB1 | umls:C0036341 | BeFree | The present study does not suggest a major influence of MDR1 G2677T/A and C3435T polymorphisms on treatment response during short-term risperidone therapy in patients with schizophrenia or schizoaffective disorder. | 0.013539756 | 2010 | ABCB1 | 7 | 87531302 | A | T,C |
| rs2032582 | 16386826 | 5243 | ABCB1 | umls:C0036341 | BeFree | The present study was therefore designed to examine whether the major polymorphisms of MDR1 gene, C3435T and G2677T/A are related to therapeutic response to neuroleptics in the treatment of schizophrenia. | 0.013539756 | 2006 | ABCB1 | 7 | 87531302 | A | T,C |
| rs2044117 | NA | 259232 | NALCN | umls:C0036341 | GAD | NA | 0.002638474 | NA | NALCN;NALCN-AS1 | 13 | 101055958 | G | A |
| rs204887 | 14755442 | 1791 | DNTT | umls:C0036341 | BeFree | The TDT analysis demonstrated that of the nine SNPs, three were associated with schizophrenia, including rs1009382 (P = 0.00047), rs204887 (P = 0.007), and rs8283 (P = 0.015). | 0.004071628 | 2004 | TNXB | 6 | 32061449 | A | G |
| rs2053079 | 25056061 | 9745 | ZNF536 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | ZNF536 | 19 | 30496516 | A | G |
| rs2055314 | 23857787 | 1663 | DDX11 | umls:C0036341 | BeFree | The aim of this study was to examine the associations of single nucleotides polymorphisms (SNPs) of the CHL1 gene locus, including rs2055314 (C/T), rs2272522 (C/T) and rs331894 (A/G), with schizophrenia in the Qatari population. | 0.000814326 | 2012 | CHL1 | 3 | 227352 | C | T |
| rs2059606 | NA | 27306 | HPGDS | umls:C0036341 | GAD | NA | 0.004538567 | NA | HPGDS | 4 | 94334127 | G | A |
| rs2068012 | 25056061 | 5587 | PRKD1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PRKD1 | 14 | 29721110 | T | C |
| rs2069756 | 24065520 | 3558 | IL2 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.009629949 | 2013 | IL13;LOC101927761 | 5 | 132657760 | T | C |
| rs2069756 | 24065520 | 3458 | IFNG | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.001357209 | 2013 | IL13;LOC101927761 | 5 | 132657760 | T | C |
| rs2069756 | 24065520 | 3569 | IL6 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.127177041 | 2013 | IL13;LOC101927761 | 5 | 132657760 | T | C |
| rs2070106 | 17964117 | 1267 | CNP | umls:C0036341 | BeFree | We found that genetic polymorphisms in CNP (rs2070106) and OLIG2 (rs1059004 and rs9653711), previously associated with schizophrenia, predicted low expression of these genes. | 0.022451187 | 2008 | CNP;DNAJC7 | 17 | 41973846 | G | A |
| rs2070565 | 24859147 | 29947 | DNMT3L | umls:C0036341 | BeFree | DNMT3L rs2070565 (genotype P = 0.007, allele P = 0.0026) confers an increased risk of developing schizophrenia at an early age in individuals with family history. | 0.000271442 | 2014 | DNMT3L | 21 | 44261270 | T | C |
| rs2075799 | 18299791 | 3308 | HSPA4 | umls:C0036341 | BeFree | Our results raise the possibility that HSP70 gene (i.e., haplotypes of rs2075799) might be implicated in the development of schizophrenia, although limited by rare haplotypic association with the disease. | 0.001357209 | 2008 | HSPA1L | 6 | 31810752 | C | T |
| rs2075984 | 22981886 | 1453 | CSNK1D | umls:C0036341 | BeFree | None of the SNPs showed a significant association with MDD, but a SNP (rs2075984) in CSNK1E and SNP (rs6502097) in CSNK1D were associated with SCZ (P=0.0091, uncorrected) and BD (P=0.030, uncorrected), respectively. | 0.002638474 | 2012 | CSNK1E;LOC400927-CSNK1E | 22 | 38294883 | C | A |
| rs2078486 | 15450681 | 788 | SLC25A20 | umls:C0036341 | BeFree | Though rs1042522 and rs8064946 did not show positive association with schizophrenia, we did observe statistically significant differences on SNP rs2078486 (P-value = 0.029; OR = 1.21; 95% CI 1.02-1.42) and on haplotype CAC (P-value = 0.0068; OR = 1.36; 95% CI 1.09-1.70). | 0.000542884 | 2004 | TP53 | 17 | 7679765 | G | A |
| rs2088885 | 19023125 | 23043 | TNIK | umls:C0036341 | GAD | [Combining imaging and genetic data from a GWAS identified genes related to forebrain development and stress response, already implicated in schizophrenic dysfunction, as affecting prefrontal efficiency.] | 0.005005506 | 2009 | TNIK | 3 | 171253502 | C | A |
| rs2111902 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | DAO | 12 | 108884971 | T | G |
| rs2111902 | 22239582 | 1610 | DAO | umls:C0036341 | BeFree | The aim of this study was therefore to examine the impact of G72 rs746187 and DAAO rs2111902 genotypes on brain function in schizophrenia, bipolar disorder and healthy volunteers. | 0.181352047 | 2012 | DAO | 12 | 108884971 | T | G |
| rs2142731 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | PGBD1 | 6 | 28283136 | A | G |
| rs2142731 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | PGBD1 | 6 | 28283136 | A | G |
| rs2142731 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | PGBD1 | 6 | 28283136 | A | G |
| rs2142731 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | PGBD1 | 6 | 28283136 | A | G |
| rs216250 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A12;LOC101929384 | 12 | 202783 | A | G |
| rs216250 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A12;LOC101929384 | 12 | 202783 | A | G |
| rs2189814 | 21281445 | 2904 | GRIN2B | umls:C0036341 | BeFree | Three polymorphisms (GRIN2B rs220599, GRM3 rs2189814 and PRKCA rs8074995) were associated with episodic verbal memory in both control and patients with cognitive deficit, but not in cognitively spared patients or the pooled schizophrenia sample. | 0.162449467 | 2011 | GRM3 | 7 | 86702440 | T | C |
| rs220599 | 21281445 | 2904 | GRIN2B | umls:C0036341 | BeFree | Three polymorphisms (GRIN2B rs220599, GRM3 rs2189814 and PRKCA rs8074995) were associated with episodic verbal memory in both control and patients with cognitive deficit, but not in cognitively spared patients or the pooled schizophrenia sample. | 0.162449467 | 2011 | GRIN2B | 12 | 13822364 | G | A |
| rs2227098 | 18163426 | 788 | SLC25A20 | umls:C0036341 | BeFree | The analysis at the haplotype level showed that susceptibility to schizophrenia was associated with the specific haplotype rs989638-rs1034428-rs2227098 CAC (P = 0.0008). | 0.000542884 | 2008 | GRIA3 | X | 123361111 | C | T |
| rs2229113 | 17066477 | 3587 | IL10RA | umls:C0036341 | BeFree | Our results suggest that homozygosity of the IL-10R1 G330R allele is associated with schizophrenia and may contribute to the expression of disease phenotype in susceptible individuals. | 0.005362824 | 2007 | IL10RA | 11 | 117998955 | A | G |
| rs2229902 | 11163549 | 2917 | GRM7 | umls:C0036341 | BeFree | Both variants, present at high frequencies, failed to demonstrate any significant association with schizophrenia (mGluR7 [Tyr433Phe] allele: P=0.33; genotype: P=0.63; mGluR8 [2846-C/T] allele: P=0.72; genotype: P=0.63). | 0.014906897 | 2001 | GRM7 | 3 | 7452730 | A | T |
| rs2229902 | 11163549 | 2918 | GRM8 | umls:C0036341 | BeFree | Both variants, present at high frequencies, failed to demonstrate any significant association with schizophrenia (mGluR7 [Tyr433Phe] allele: P=0.33; genotype: P=0.63; mGluR8 [2846-C/T] allele: P=0.72; genotype: P=0.63). | 0.003452799 | 2001 | GRM7 | 3 | 7452730 | A | T |
| rs2230469 | 19644675 | 5305 | PIP4K2A | umls:C0036341 | BeFree | Coexpression of the schizophrenia-associated mutant (N251S)PIP5K2A significantly decreased I(glu) in oocytes expressing EAAT3 with or without additional expression of wild type PIP5K2A. | 0.030366609 | 2009 | PIP4K2A | 10 | 22550699 | T | C |
| rs2230469 | 18545987 | 3785 | KCNQ2 | umls:C0036341 | BeFree | We find that wild-type PIP5K2A but not the schizophrenia-associated mutant (N251S)-PIP5K2A activates heteromeric KCNQ2/KCNQ3 and KCNQ3/KCNQ5, the molecular correlate of neuronal M channels. | 0.000542884 | 2008 | PIP4K2A | 10 | 22550699 | T | C |
| rs2230469 | 18545987 | 56479 | KCNQ5 | umls:C0036341 | BeFree | We find that wild-type PIP5K2A but not the schizophrenia-associated mutant (N251S)-PIP5K2A activates heteromeric KCNQ2/KCNQ3 and KCNQ3/KCNQ5, the molecular correlate of neuronal M channels. | 0.000271442 | 2008 | PIP4K2A | 10 | 22550699 | T | C |
| rs2230469 | 19644675 | 6505 | SLC1A1 | umls:C0036341 | BeFree | Coexpression of the schizophrenia-associated mutant (N251S)PIP5K2A significantly decreased I(glu) in oocytes expressing EAAT3 with or without additional expression of wild type PIP5K2A. | 0.008348685 | 2009 | PIP4K2A | 10 | 22550699 | T | C |
| rs2230469 | 18545987 | 3786 | KCNQ3 | umls:C0036341 | BeFree | We find that wild-type PIP5K2A but not the schizophrenia-associated mutant (N251S)-PIP5K2A activates heteromeric KCNQ2/KCNQ3 and KCNQ3/KCNQ5, the molecular correlate of neuronal M channels. | 0.000271442 | 2008 | PIP4K2A | 10 | 22550699 | T | C |
| rs2234693 | 19386276 | 2099 | ESR1 | umls:C0036341 | BeFree | A recent study reported an association between rs2234693, which influences enhancer activity levels in estrogen receptor alpha gene (ESR1), and schizophrenia. | 0.016731045 | 2009 | ESR1 | 6 | 151842200 | T | C |
| rs2236418 | 17412563 | 2572 | GAD2 | umls:C0036341 | BeFree | Using the multifactor-dimensionality reduction method (MDR), we found that the interactions among the rs187269C/T polymorphism in the GABRB2 gene, the -243A/G polymorphism in the GAD2 gene and the 27379C/T and 661C/T polymorphisms in the GAD1 gene revealed a significant association with schizophrenia (P<0.001). | 0.133635564 | 2007 | GAD2 | 10 | 26216567 | A | G |
| rs2236418 | 17412563 | 2561 | GABRB2 | umls:C0036341 | BeFree | Using the multifactor-dimensionality reduction method (MDR), we found that the interactions among the rs187269C/T polymorphism in the GABRB2 gene, the -243A/G polymorphism in the GAD2 gene and the 27379C/T and 661C/T polymorphisms in the GAD1 gene revealed a significant association with schizophrenia (P<0.001). | 0.151538253 | 2007 | GAD2 | 10 | 26216567 | A | G |
| rs2237457 | 25223841 | 2887 | GRB10 | umls:C0036341 | GWASCAT | Haploview disclosed a 30 kb block flanking this SNP within GRB10, 70 kb upstream of l-dopa decarboxylase (DDC), an enzyme which is rate-limiting in the synthesis of trace amines and neurotransmitters implicated in schizophrenia and the action of APDs. | 0.120271442 | 2014 | GRB10 | 7 | 50658447 | C | T |
| rs2238751 | 25043418 | 80331 | DNAJC5 | umls:C0036341 | BeFree | Analysis of 62 SNPs covering 6 CSP genes in 2019 Han Chinese (976 SCZ patients and 1043 healthy individuals) showed an association of two SNPs (rs4379857, P = 0.009, OR [95% CI]: 1.200 [1.379-1.046]; rs2238751, P = 0.023, OR [95% CI]: 1.253 [1.522-1.032]) with SCZ. | 0.000271442 | 2014 | DGCR2 | 22 | 19070277 | G | A |
| rs2239547 | 21926974 | 3700 | ITIH4 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.124734064 | 2011 | ITIH4 | 3 | 52821213 | T | C |
| rs2239547 | 24461634 | 3699 | ITIH3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.120542884 | 2013 | ITIH4 | 3 | 52821213 | T | C |
| rs2239547 | 24461634 | 288 | ANK3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.12853425 | 2013 | ITIH4 | 3 | 52821213 | T | C |
| rs2239547 | 24461634 | 775 | CACNA1C | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.13497291 | 2013 | ITIH4 | 3 | 52821213 | T | C |
| rs2239547 | 21926974 | 3700 | ITIH4 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.124734064 | 2011 | ITIH4 | 3 | 52821213 | T | C |
| rs2245532 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10935190 | A | G |
| rs2245532 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10935190 | A | G |
| rs2252865 | 21926974 | 473 | RERE | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | RERE | 1 | 8362616 | T | C |
| rs2269372 | 24043878 | 5973 | RENBP | umls:C0036341 | GWASCAT | Our findings identified a new schizophrenia susceptibility locus on Xq28, which harbor the genes RENBP, MECP2, and ARHGAP4. | 0.120814326 | 2015 | RENBP | X | 153942092 | A | G |
| rs2271537 | 19502010 | 6999 | TDO2 | umls:C0036341 | GAD | [TDO2CC+MC5RG, any+MCHR2GC conferred an OR maximal for schizophrenia alone (4.84, p=0.005), carried by 8% of schizophrenia cases.] | 0.004538567 | 2009 | TDO2 | 4 | 155908671 | A | C |
| rs2271933 | 15978554 | 3061 | HCRTR1 | umls:C0036341 | BeFree | Screening of the orexin signaling system detected a 408 isoleucine to valine mutation in HCRTR1 that showed significant genotypic association with polydipsic-hyponatremic schizophrenia (p = .012). | 0.005634266 | 2005 | HCRTR1 | 1 | 31626924 | A | G |
| rs2272400 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10934163 | C | T |
| rs2272400 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10934163 | C | T |
| rs2272522 | 23857787 | 1663 | DDX11 | umls:C0036341 | BeFree | The aim of this study was to examine the associations of single nucleotides polymorphisms (SNPs) of the CHL1 gene locus, including rs2055314 (C/T), rs2272522 (C/T) and rs331894 (A/G), with schizophrenia in the Qatari population. | 0.000814326 | 2012 | CHL1 | 3 | 319825 | C | T |
| rs2283265 | 24495967 | 1312 | COMT | umls:C0036341 | BeFree | We assessed catechol-O-methyltransferase (COMT) Val108/158Met (rs4680) and dopamine D2 receptor (DRD2) G-T (rs2283265) single nucleotide polymorphisms and functional magnetic resonance imaging during an emotional response inhibition test in 43 healthy adults and 27 people with schizophrenia to determine the extent to which COMT Val108/158Met and DRD2 G-T polymorphisms combine to influence prefrontal response to cognitive-affective challenges. | 0.345417491 | 2013 | DRD2 | 11 | 113414814 | C | A |
| rs2283265 | 24495967 | 1813 | DRD2 | umls:C0036341 | BeFree | We assessed catechol-O-methyltransferase (COMT) Val108/158Met (rs4680) and dopamine D2 receptor (DRD2) G-T (rs2283265) single nucleotide polymorphisms and functional magnetic resonance imaging during an emotional response inhibition test in 43 healthy adults and 27 people with schizophrenia to determine the extent to which COMT Val108/158Met and DRD2 G-T polymorphisms combine to influence prefrontal response to cognitive-affective challenges. | 0.291131658 | 2013 | DRD2 | 11 | 113414814 | C | A |
| rs2289086 | 20600594 | 472 | ATM | umls:C0036341 | BeFree | Furthermore, the frequency of haplotype ATC of rs3791709-rs2289086-rs3748962 was found to be significantly higher in the patients with schizophrenia than in the controls (case vs. control=36.0% vs. 24.4%, permutation p-value=0.0002). | 0.005905708 | 2010 | ERBB4 | 2 | 211420378 | T | C |
| rs2289708 | 22807112 | 6854 | SYN2 | umls:C0036341 | BeFree | The rs2289708 SNP (SYN2) did not show any association between schizophrenia and controls. | 0.134807208 | 2012 | SYN2 | 3 | 12183853 | C | G,T |
| rs2289954 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A13 | 12 | 223196 | C | G,T |
| rs2289954 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A13 | 12 | 223196 | C | G,T |
| rs2295814 | 20687139 | 1959 | EGR2 | umls:C0036341 | BeFree | However, an association between the SNPs of EGR2 (rs2295814 and rs2297488) and schizophrenia was not found. | 0.00554839 | 2010 | EGR2 | 10 | 62811516 | G | A |
| rs2297488 | 20687139 | 1959 | EGR2 | umls:C0036341 | BeFree | However, an association between the SNPs of EGR2 (rs2295814 and rs2297488) and schizophrenia was not found. | 0.00554839 | 2010 | EGR2 | 10 | 62815485 | G | A |
| rs2297660 | 22419519 | 7804 | LRP8 | umls:C0036341 | BeFree | HIMS replication analysis supported rs439401 (APOE regulatory region), and rs2297660 and rs3737983 (APOER2), with an effect on memory performance in normal aging subjects consistent with the findings in schizophrenia cases. | 0.002909916 | 2012 | LRP8;LOC105378728 | 1 | 53266643 | G | T |
| rs2301228 | 25445624 | 4684 | NCAM1 | umls:C0036341 | BeFree | Promoter variant rs2301228 on the neural cell adhesion molecule 1 gene confers risk of schizophrenia in Han Chinese. | 0.007620235 | 2014 | NCAM1;LOC101928847 | 11 | 112960736 | A | G |
| rs2304725 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10844235 | T | C |
| rs2304725 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A11 | 3 | 10844235 | T | C |
| rs230529 | 22479419 | 4790 | NFKB1 | umls:C0036341 | GAD | [This study suggests that rs28362691 in NFKB1 might be involved in the development of TRS.] | 0.134581916 | 2012 | NFKB1 | 4 | 102536261 | T | C |
| rs230529 | 22479419 | 4790 | NFKB1 | umls:C0036341 | GWASCAT | This study suggests that rs28362691 in NFKB1 might be involved in the development of TRS. | 0.134581916 | 2012 | NFKB1 | 4 | 102536261 | T | C |
| rs2312147 | 19571808 | 7444 | VRK2 | umls:C0036341 | GAD | [Common variants conferring risk of schizophrenia.] | 0.122909916 | 2009 | VRK2;LOC105374726 | 2 | 57995793 | T | C |
| rs2312147 | 23102693 | 7444 | VRK2 | umls:C0036341 | BeFree | Meta-analysis and brain imaging data support the involvement of VRK2 (rs2312147) in schizophrenia susceptibility. | 0.122909916 | 2012 | VRK2;LOC105374726 | 2 | 57995793 | T | C |
| rs2312147 | 19571808 | 7444 | VRK2 | umls:C0036341 | GWASCAT | Common variants conferring risk of schizophrenia. | 0.122909916 | 2009 | VRK2;LOC105374726 | 2 | 57995793 | T | C |
| rs2332700 | 25056061 | 9628 | RGS6 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | RGS6 | 14 | 71950609 | C | G |
| rs2373000 | 23974872 | 25797 | QPCT | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.120271442 | 2013 | QPCT | 2 | 37365485 | C | T |
| rs2391191 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | DAOA;DAOA-AS1 | 13 | 105467097 | G | A |
| rs2391191 | 23335491 | 5664 | PSEN2 | umls:C0036341 | BeFree | The stage-1 study showed association of the DAOA and PSEN2 genes with schizophrenia in a small sample; the stage-2 study with an expanded sample confirmed the disease association for 2-SNP and 3-SNP haplotypes, and the cis-phase interactions between rs2391191 and some other SNPs in the DAOA gene. | 0.001085767 | 2013 | DAOA;DAOA-AS1 | 13 | 105467097 | G | A |
| rs2430561 | 24065520 | 3569 | IL6 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.127177041 | 2013 | IFNG | 12 | 68158742 | T | A |
| rs2430561 | 24065520 | 3458 | IFNG | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.001357209 | 2013 | IFNG | 12 | 68158742 | T | A |
| rs2430561 | 24065520 | 3558 | IL2 | umls:C0036341 | BeFree | This study aimed at investigating the association between schizophrenia susceptibility and selected functional polymorphisms in genes encoding cytokines including: interleukin-2 (IL2 -330T>G, rs2069756), interleukin-6 (IL-6 -174G>C, rs1800795), interferon-γ (IFNG +874T>A, rs2430561) as well as for the first time transforming growth factor-β1 (TGFB1 +869T>C, rs1800470 and +916G>C, rs1800471). | 0.009629949 | 2013 | IFNG | 12 | 68158742 | T | A |
| rs245201 | 19023125 | 613212 | CTXN3 | umls:C0036341 | GAD | [Combining imaging and genetic data from a GWAS identified genes related to forebrain development and stress response, already implicated in schizophrenic dysfunction, as affecting prefrontal efficiency.] | 0.002909916 | 2009 | LINC01183;LOC105379166 | 5 | 127833520 | A | G |
| rs2518824 | 24819575 | 9856 | KIAA0319 | umls:C0036341 | BeFree | Carriage of the minor allele at rs2518824 in the armadillo repeat gene deleted in velocardiofacial syndrome (ARVCF) gene, which has been linked to neuronal migration and schizophrenia, and rs174576 in the fatty acid desaturase 2 gene, which encodes a rate-limiting enzyme for endogenous long chain polyunsaturated fatty acid synthesis and has been linked to intelligence, was associated with white matter abnormality measured in vivo using diffusion tensor imaging (P = .0009 and P = .0019, respectively). | 0.004071628 | 2014 | ARVCF | 22 | 19975440 | G | T |
| rs2518824 | 24819575 | 421 | ARVCF | umls:C0036341 | BeFree | Carriage of the minor allele at rs2518824 in the armadillo repeat gene deleted in velocardiofacial syndrome (ARVCF) gene, which has been linked to neuronal migration and schizophrenia, and rs174576 in the fatty acid desaturase 2 gene, which encodes a rate-limiting enzyme for endogenous long chain polyunsaturated fatty acid synthesis and has been linked to intelligence, was associated with white matter abnormality measured in vivo using diffusion tensor imaging (P = .0009 and P = .0019, respectively). | 0.003724241 | 2014 | ARVCF | 22 | 19975440 | G | T |
| rs2519152 | 22940547 | 6616 | SNAP25 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.098088254 | 2013 | DBH | 9 | 133644512 | T | C |
| rs2519152 | 22940547 | 1621 | DBH | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.024636535 | 2013 | DBH | 9 | 133644512 | T | C |
| rs2519152 | 22940547 | 1814 | DRD3 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.264470765 | 2013 | DBH | 9 | 133644512 | T | C |
| rs2519152 | 22940547 | 150 | ADRA2A | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.006362715 | 2013 | DBH | 9 | 133644512 | T | C |
| rs2523722 | 22883433 | 7726 | TRIM26 | umls:C0036341 | GWASCAT | Genome-wide association study implicates HLA-C*01:02 as a risk factor at the major histocompatibility complex locus in schizophrenia. | 0.122367032 | 2012 | TRIM26 | 6 | 30197496 | C | T |
| rs2529059 | NA | 4852 | NPY | umls:C0036341 | GAD | NA | 0.015721222 | NA | NA | 7 | 24543155 | T | C |
| rs252944 | 14699426 | 2561 | GABRB2 | umls:C0036341 | BeFree | Five SNPs in GABRB2, namely B2I7G1584T, rs1816071, rs194072, rs252944 and rs187269, were found to be significantly associated, and their haplotypes in linkage disequilibrium, with schizophrenia. | 0.151538253 | 2004 | GABRB2 | 5 | 161331330 | C | G |
| rs25531 | 22520017 | 6532 | SLC6A4 | umls:C0036341 | BeFree | Suicide ideators and attempters with schizophrenia--the role of 5-HTTLPR, rs25531, and 5-HTT VNTR Intron 2 variants. | 0.228583066 | 2012 | SLC6A4;LOC105371720 | 17 | 30237328 | T | C |
| rs2619539 | 19496996 | 84062 | DTNBP1 | umls:C0036341 | BeFree | The possible association between a single nucleotide polymorphism (SNP) of DTNBP1 (rs2619539: P1655), which is a risk-independent SNP for schizophrenia in Japanese populations, and memory and IQ was investigated in 70 schizophrenia patients and 165 healthy volunteers in a Japanese population. | 0.371141589 | 2009 | DTNBP1 | 6 | 15620624 | C | A,G |
| rs2693698 | 25056061 | 64919 | BCL11B | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | BCL11B | 14 | 99252882 | A | G |
| rs2731880 | 24956246 | 6507 | SLC1A3 | umls:C0036341 | BeFree | To evaluate the effect of functional polymorphisms (rs4354668 and rs2731880) of the excitatory amino acid transporters (EAAT1 and 2) on the cognitive dysfunction that characterizes schizophrenia. | 0.008815624 | 2015 | NA | 5 | 36603282 | T | C |
| rs2745557 | 19560328 | 5321 | PLA2G4A | umls:C0036341 | BeFree | Eight SNPs detected across the PPARG gene did not show allelic association with schizophrenia; a weak association was detected at rs2745557 in the PTGS2 locus (chi2=4.19, p=0.041) and rs10798059 in the PLA2G4A locus (chi2=4.28, p=0.039) but these associations did not survive after 10,000 permutations to correct the p-value (global p=0.246). | 0.026360994 | 2009 | PTGS2;PACERR | 1 | 186680089 | A | G |
| rs2745557 | 19560328 | 5743 | PTGS2 | umls:C0036341 | BeFree | Eight SNPs detected across the PPARG gene did not show allelic association with schizophrenia; a weak association was detected at rs2745557 in the PTGS2 locus (chi2=4.19, p=0.041) and rs10798059 in the PLA2G4A locus (chi2=4.28, p=0.039) but these associations did not survive after 10,000 permutations to correct the p-value (global p=0.246). | 0.0889015 | 2009 | PTGS2;PACERR | 1 | 186680089 | A | G |
| rs2851447 | 25056061 | 10198 | MPHOSPH9 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | MPHOSPH9 | 12 | 123180566 | G | C |
| rs2944829 | 26163462 | 83698 | CALN1 | umls:C0036341 | BeFree | In a previous study, we analyzed the SNPs in a group of predicted MIR137 target genes and detected genome-wide significant association of schizophrenia with rs2944829 in the CALN1 gene. | 0.002638474 | 2015 | CALN1 | 7 | 72321736 | G | A |
| rs2944829 | 26163462 | 406928 | MIR137 | umls:C0036341 | BeFree | In a previous study, we analyzed the SNPs in a group of predicted MIR137 target genes and detected genome-wide significant association of schizophrenia with rs2944829 in the CALN1 gene. | 0.127057489 | 2015 | CALN1 | 7 | 72321736 | G | A |
| rs2949006 | 23974872 | 348751 | FTCDNL1 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | FTCDNL1 | 2 | 199850665 | T | C,G |
| rs2968804 | 21563301 | 4099 | MAG | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.013254501 | 2011 | RTN4 | 2 | 54977362 | G | C |
| rs2968804 | 21563301 | 57142 | RTN4 | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.13926983 | 2011 | RTN4 | 2 | 54977362 | G | C |
| rs3130297 | 21987052 | 4855 | NOTCH4 | umls:C0036341 | BeFree | A major consortium study have recently linked BD to hundreds of variations with stronger associations in the MHC region, such as the rs3130297 SNP, located in the NOTCH4 gene, with an additional overlapping association with schizophrenia. | 0.197169077 | 2012 | NA | 6 | 32231204 | C | T |
| rs3131296 | 25142293 | 4855 | NOTCH4 | umls:C0036341 | BeFree | Association between the NOTCH4 gene rs3131296 polymorphism with schizophrenia risk in the Chinese Zhuang population and Chinese Han population. | 0.197169077 | 2015 | NOTCH4 | 6 | 32205216 | C | T |
| rs3131296 | 19571808 | 4855 | NOTCH4 | umls:C0036341 | GWASCAT | Common variants conferring risk of schizophrenia. | 0.197169077 | 2009 | NOTCH4 | 6 | 32205216 | C | T |
| rs3132935 | 23894747 | 4855 | NOTCH4 | umls:C0036341 | GWASCAT | We replicated SNPs in TCF4 (P = 2.53 x 10(-10)) and NOTCH4 (P = 3.16 x 10(-7)) that are among the most robust SCZ findings. | 0.197169077 | 2013 | NOTCH4 | 6 | 32203298 | A | G |
| rs3219151 | 23332465 | 2559 | GABRA6 | umls:C0036341 | BeFree | Our results suggest that rs3219151 of GABRA6 was associated significantly to decrease the risk of schizophrenia, rs10759 (RGS4) was possible to increase the risk of schizophrenia by miRNA altering the binding of miRNAs to their targets influencing susceptibility to schizophrenia. | 0.123181358 | 2012 | GABRA6 | 5 | 161701908 | C | T |
| rs3219151 | 23332465 | 5999 | RGS4 | umls:C0036341 | BeFree | Our results suggest that rs3219151 of GABRA6 was associated significantly to decrease the risk of schizophrenia, rs10759 (RGS4) was possible to increase the risk of schizophrenia by miRNA altering the binding of miRNAs to their targets influencing susceptibility to schizophrenia. | 0.216710349 | 2012 | GABRA6 | 5 | 161701908 | C | T |
| rs324981 | 22078257 | 387129 | NPSR1 | umls:C0036341 | BeFree | The functional coding variant Asn107Ile of the neuropeptide S receptor gene (NPSR1) is associated with schizophrenia and modulates verbal memory and the acoustic startle response. | 0.000814326 | 2012 | NPSR1;NPSR1-AS1 | 7 | 34778501 | A | T |
| rs324981 | 23680103 | 387129 | NPSR1 | umls:C0036341 | BeFree | A coding variation (Asn107Ile) of the NPS receptor gene (NPSR1) was associated with panic disorder and schizophrenia. | 0.000814326 | 2014 | NPSR1;NPSR1-AS1 | 7 | 34778501 | A | T |
| rs324981 | 23680103 | 594857 | NPS | umls:C0036341 | BeFree | A coding variation (Asn107Ile) of the NPS receptor gene (NPSR1) was associated with panic disorder and schizophrenia. | 0.000542884 | 2014 | NPSR1;NPSR1-AS1 | 7 | 34778501 | A | T |
| rs331894 | 23857787 | 1663 | DDX11 | umls:C0036341 | BeFree | The aim of this study was to examine the associations of single nucleotides polymorphisms (SNPs) of the CHL1 gene locus, including rs2055314 (C/T), rs2272522 (C/T) and rs331894 (A/G), with schizophrenia in the Qatari population. | 0.000814326 | 2012 | CHL1 | 3 | 295083 | C | T |
| rs35753505 | 25106628 | 3084 | NRG1 | umls:C0036341 | BeFree | Drugs targeting SNPrs35753505 of the NRG1 gene may prevent the association of neurological disorder schizophrenia in a Pakistani population. | 0.330216746 | 2014 | NA | 8 | 31616625 | T | C |
| rs35753505 | 25858800 | 3084 | NRG1 | umls:C0036341 | BeFree | To determine the genetic association between qualitative and quantitative traits of autism spectrum disorder (ASD) and neuregulin 1 (NRG1)-a schizophrenia candidate gene-we examined six single nucleotide polymorphisms (SNPs) in NRG1 using a family-based association test (FBAT) in Korean families with ASD. rs35753505 and rs6994992 SNPs in NRG1 revealed a statistically significant family-based association with three quantitative traits for sociality. | 0.330216746 | 2015 | NA | 8 | 31616625 | T | C |
| rs362719 | 21863557 | 5649 | RELN | umls:C0036341 | BeFree | A new single-nucleotide mutation (rs362719) of the reelin (RELN) gene associated with schizophrenia in female Chinese Han. | 0.370493034 | 2011 | RELN | 7 | 103545430 | C | A |
| rs367398 | 21085055 | 4855 | NOTCH4 | umls:C0036341 | BeFree | Methylation analysis of the NOTCH4 -25 C/T polymorphism in schizophrenia. | 0.197169077 | 2011 | NOTCH4 | 6 | 32223953 | G | A |
| rs3735025 | 25056061 | 9162 | DGKI | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122367032 | 2014 | DGKI | 7 | 137390098 | T | C |
| rs3737983 | 22419519 | 7804 | LRP8 | umls:C0036341 | BeFree | HIMS replication analysis supported rs439401 (APOE regulatory region), and rs2297660 and rs3737983 (APOER2), with an effect on memory performance in normal aging subjects consistent with the findings in schizophrenia cases. | 0.002909916 | 2012 | LRP8 | 1 | 53250744 | G | T,A |
| rs3741775 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | DAO | 12 | 108889827 | A | C |
| rs3743852 | 25645869 | 3029 | HAGH | umls:C0036341 | BeFree | The variants in HAGH, rs11859266 and rs3743852, showed significant associations with schizophrenia in males at allelic and genotype levels, which remained persistent after multiple testing with the exception of rs3743852 for the genotype model. | 0.000271442 | 2015 | HAGH;FAHD1 | 16 | 1827697 | C | G |
| rs3746544 | 22940547 | 1814 | DRD3 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.264470765 | 2013 | SNAP25 | 20 | 10306436 | G | T |
| rs3746544 | 22940547 | 1621 | DBH | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.024636535 | 2013 | SNAP25 | 20 | 10306436 | G | T |
| rs3746544 | 22940547 | 6616 | SNAP25 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.098088254 | 2013 | SNAP25 | 20 | 10306436 | G | T |
| rs3746544 | 22940547 | 150 | ADRA2A | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.006362715 | 2013 | SNAP25 | 20 | 10306436 | G | T |
| rs3748962 | 20600594 | 472 | ATM | umls:C0036341 | BeFree | Furthermore, the frequency of haplotype ATC of rs3791709-rs2289086-rs3748962 was found to be significantly higher in the patients with schizophrenia than in the controls (case vs. control=36.0% vs. 24.4%, permutation p-value=0.0002). | 0.005905708 | 2010 | ERBB4 | 2 | 211387139 | T | C |
| rs3749034 | 22496567 | 2571 | GAD1 | umls:C0036341 | BeFree | The expression of AK098371 is associated with a GAD1 single nucleotide polymorphism (rs3749034) that previously has been associated with GAD67 expression and risk for schizophrenia. | 0.163034619 | 2012 | GAD1 | 2 | 170816965 | G | A |
| rs3756311 | 18541413 | 6625 | SNRNP70 | umls:C0036341 | BeFree | The genotype and haplotype frequencies of 3 of the 6 SNPs [SNP1 (g.-1924T>C, rs3756314), SNP3 (g.-1772A>G, rs3756312) and SNP4 (rs3756311, g.-1658G>A)] were significantly associated with SCZ [SNP1, corrected p=0.012 (co-dominant model), 0.002 (Dominant model), and 0.506 (Recessive model); SNP3 and 4, corrected p=0.003, 0.009, and 0.049]. | 0.001357209 | 2008 | PDGFRB | 5 | 150157517 | A | G |
| rs3756312 | 18541413 | 6625 | SNRNP70 | umls:C0036341 | BeFree | The genotype and haplotype frequencies of 3 of the 6 SNPs [SNP1 (g.-1924T>C, rs3756314), SNP3 (g.-1772A>G, rs3756312) and SNP4 (rs3756311, g.-1658G>A)] were significantly associated with SCZ [SNP1, corrected p=0.012 (co-dominant model), 0.002 (Dominant model), and 0.506 (Recessive model); SNP3 and 4, corrected p=0.003, 0.009, and 0.049]. | 0.001357209 | 2008 | PDGFRB | 5 | 150157631 | A | G |
| rs3756314 | 18541413 | 6625 | SNRNP70 | umls:C0036341 | BeFree | The genotype and haplotype frequencies of 3 of the 6 SNPs [SNP1 (g.-1924T>C, rs3756314), SNP3 (g.-1772A>G, rs3756312) and SNP4 (rs3756311, g.-1658G>A)] were significantly associated with SCZ [SNP1, corrected p=0.012 (co-dominant model), 0.002 (Dominant model), and 0.506 (Recessive model); SNP3 and 4, corrected p=0.003, 0.009, and 0.049]. | 0.001357209 | 2008 | PDGFRB | 5 | 150157783 | T | C |
| rs3768644 | 25056061 | 56603 | CYP26B1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122638474 | 2014 | CYP26B1 | 2 | 72134376 | G | A |
| rs3791709 | 20600594 | 472 | ATM | umls:C0036341 | BeFree | Furthermore, the frequency of haplotype ATC of rs3791709-rs2289086-rs3748962 was found to be significantly higher in the patients with schizophrenia than in the controls (case vs. control=36.0% vs. 24.4%, permutation p-value=0.0002). | 0.005905708 | 2010 | ERBB4 | 2 | 211422209 | A | T |
| rs3791878 | 18335162 | 7495 | XBP1P1 | umls:C0036341 | BeFree | Given that the switch from G to T in SNP rs3791878 might cause the loss of ARNT and XBP1 transcriptional factor binding sites using a bioinformatics approach, our positive findings of this SNP support the hypothesis that the abruption of GAD1 gene is important to the risk of schizophrenia. | 0.001085767 | 2008 | GAD1 | 2 | 170815681 | G | T |
| rs3791878 | 18335162 | 375056 | MIA3 | umls:C0036341 | BeFree | Given that the switch from G to T in SNP rs3791878 might cause the loss of ARNT and XBP1 transcriptional factor binding sites using a bioinformatics approach, our positive findings of this SNP support the hypothesis that the abruption of GAD1 gene is important to the risk of schizophrenia. | 0.000271442 | 2008 | GAD1 | 2 | 170815681 | G | T |
| rs3800917 | NA | 8379 | MAD1L1 | umls:C0036341 | GAD | NA | 0.122638474 | NA | MAD1L1 | 7 | 2128304 | G | A |
| rs3804452 | 20347265 | 1432 | MAPK14 | umls:C0036341 | BeFree | We also demonstrated that this new variant ss178077483, combined with mir-30e rs7556088 and mir-24-MAPK14 rs3804452, showed a weak gene-gene interaction for schizophrenia risk (P=0.001). | 0.005276948 | 2010 | MAPK14 | 6 | 36109157 | G | A |
| rs3813535 | 23785397 | 85439 | STON2 | umls:C0036341 | BeFree | Cortical surface area correlates with STON2 gene Ser307Pro polymorphism in first-episode treatment-naïve patients with schizophrenia. | 0.000542884 | 2013 | STON2 | 14 | 81278392 | A | G |
| rs3813929 | 20045196 | 3358 | HTR2C | umls:C0036341 | BeFree | Absence of weight gain association with the HTR2C -759C/T polymorphism in patients with schizophrenia treated with iloperidone. | 0.037815092 | 2010 | HTR2C | X | 114584047 | C | T |
| rs3849046 | 25056061 | 2107 | ETF1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | ETF1 | 5 | 138515503 | C | T |
| rs3851179 | 20738160 | 1191 | CLU | umls:C0036341 | BeFree | Association analysis between the rs11136000 single nucleotide polymorphism in clusterin gene, rs3851179 single nucleotide polymorphism in clathrin assembly lymphoid myeloid protein gene and the patients with schizophrenia in the Chinese population. | 0.002638474 | 2010 | NA | 11 | 86157598 | T | C |
| rs3864075 | 25579050 | 3703 | STT3A | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.122638474 | 2014 | GRM7 | 3 | 7659884 | G | A |
| rs3864075 | 25579050 | 2917 | GRM7 | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.014906897 | 2014 | GRM7 | 3 | 7659884 | G | A |
| rs386589568 | 15276238 | 3084 | NRG1 | umls:C0036341 | BeFree | Case-control and family-based association studies between the neuregulin 1 (Arg38Gln) polymorphism and schizophrenia. | 0.330216746 | 2004 | NA | NA | NA | NA | NA |
| rs386602118 | 16472361 | 627 | BDNF | umls:C0036341 | BeFree | Prefrontal cognition in schizophrenia and bipolar illness in relation to Val66Met polymorphism of the brain-derived neurotrophic factor gene. | 0.295766032 | 2006 | NA | NA | NA | NA | NA |
| rs386602118 | 24289908 | 627 | BDNF | umls:C0036341 | BeFree | Lack of association between brain-derived neurotrophic factor Val66Met polymorphism and aggressive behavior in schizophrenia. | 0.295766032 | 2013 | NA | NA | NA | NA | NA |
| rs386602118 | 22521161 | 627 | BDNF | umls:C0036341 | BeFree | To test the hypothesis that the BDNF Val66Met polymorphism influence obsessive-compulsive symptoms (OCS) in schizophrenia, we examined the association between the BDNF Val66Met genotypes and OCS in a group of patients with schizophrenia. | 0.295766032 | 2012 | NA | NA | NA | NA | NA |
| rs386602118 | 16897602 | 627 | BDNF | umls:C0036341 | BeFree | Interaction between catechol-O-methyltransferase (COMT) Val108/158Met and brain-derived neurotrophic factor (BDNF) Val66Met polymorphisms in age at onset and clinical symptoms in schizophrenia. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 20420877 | 627 | BDNF | umls:C0036341 | BeFree | Furthermore, our results show the heterozygous effect of the BDNF Val66Met gene on the clinical variability of schizophrenia phenotype. | 0.295766032 | 2010 | NA | NA | NA | NA | NA |
| rs386602118 | 21710362 | 627 | BDNF | umls:C0036341 | BeFree | We have also performed the haplotype analysis with val66met BDNF polymorphism, which is known to be involved in the pathogenesis of schizophrenia. | 0.295766032 | 2012 | NA | NA | NA | NA | NA |
| rs386602118 | 18486103 | 627 | BDNF | umls:C0036341 | BeFree | This differential response to fetal hypoxia was specific to schizophrenia and was not explained by other obstetric complications or by the BDNF valine (val) to methionine (met) polymorphism at codon 66 (val66met). | 0.295766032 | 2008 | NA | NA | NA | NA | NA |
| rs386602118 | 19714565 | 627 | BDNF | umls:C0036341 | BeFree | Effects of brain-derived neurotrophic factor Val66Met polymorphism on hippocampal volume change in schizophrenia. | 0.295766032 | 2010 | NA | NA | NA | NA | NA |
| rs386602118 | 12951204 | 627 | BDNF | umls:C0036341 | BeFree | Our finding suggests that this BDNF-gene Val66Met polymorphism may be related to schizophrenia pathogenesis in patients responsive to clozapine treatment. | 0.295766032 | 2003 | NA | NA | NA | NA | NA |
| rs386602118 | 15719396 | 627 | BDNF | umls:C0036341 | BeFree | In an attempt to replicate this finding, we genotyped 206 individuals (92 affected with schizophrenia or a related disorder and 114 unaffected relatives) from the Maudsley Family Study for the BDNF val66 met polymorphism. | 0.295766032 | 2005 | NA | NA | NA | NA | NA |
| rs386602118 | 17894414 | 627 | BDNF | umls:C0036341 | BeFree | Genotyping of African-American subjects with schizophrenia for five BDNF coding region single nucleotide polymorphisms revealed variance only at the Val66Met allele. | 0.295766032 | 2008 | NA | NA | NA | NA | NA |
| rs386602118 | 16533563 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor (BDNF) Val66Met polymorphism in schizophrenia is associated with age at onset and symptoms. | 0.295766032 | 2006 | NA | NA | NA | NA | NA |
| rs386602118 | 18325670 | 627 | BDNF | umls:C0036341 | BeFree | Association between the brain-derived neurotrophic factor Val66Met polymorphism and brain morphology in a Japanese sample of schizophrenia and healthy comparisons. | 0.295766032 | 2008 | NA | NA | NA | NA | NA |
| rs386602118 | 23923080 | 627 | BDNF | umls:C0036341 | BeFree | Association of the brain-derived neurotrophic factor gene G196A rs6265 polymorphisms and the cognitive function and clinical symptoms of schizophrenia. | 0.295766032 | 2013 | NA | NA | NA | NA | NA |
| rs386602118 | 17217930 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor Val66Met and psychiatric disorders: meta-analysis of case-control studies confirm association to substance-related disorders, eating disorders, and schizophrenia. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 20708907 | 627 | BDNF | umls:C0036341 | BeFree | The current study examines functional imaging correlates of the BDNF val66met polymorphism in a population at high genetic risk of schizophrenia. | 0.295766032 | 2010 | NA | NA | NA | NA | NA |
| rs386602118 | 23319002 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor (BDNF) Val(66)Met polymorphism differentially predicts hippocampal function in medication-free patients with schizophrenia. | 0.295766032 | 2014 | NA | NA | NA | NA | NA |
| rs386602118 | 25562189 | 627 | BDNF | umls:C0036341 | BeFree | Here we provide a comprehensive review of the relationship between the BDNF Val66Met polymorphism and schizophrenia, integrating evidence from the fields of genetic epidemiology, clinical psychiatry, behavioral neuroscience and neuroimaging. | 0.295766032 | 2014 | NA | NA | NA | NA | NA |
| rs386602118 | 18062171 | 627 | BDNF | umls:C0036341 | BeFree | Associations between brain-derived neurotrophic factor G196A gene polymorphism and clinical phenotypes in schizophrenia patients. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 16818862 | 627 | BDNF | umls:C0036341 | BeFree | Cognitive and magnetic resonance imaging brain morphometric correlates of brain-derived neurotrophic factor Val66Met gene polymorphism in patients with schizophrenia and healthy volunteers. | 0.295766032 | 2006 | NA | NA | NA | NA | NA |
| rs386602118 | 21044653 | 627 | BDNF | umls:C0036341 | BeFree | A single base pair polymorphism (BDNF Val66Met) was reported to be associated with AD and/or schizophrenia, as well as other psychoses, although some studies failed to replicate these findings. | 0.295766032 | 2011 | NA | NA | NA | NA | NA |
| rs386602118 | 17267117 | 627 | BDNF | umls:C0036341 | BeFree | No association between the brain-derived neurotrophic factor (BDNF) Val66Met polymorphism and schizophrenia in Asian populations: Evidence from a case-control study and meta-analysis. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 17239400 | 627 | BDNF | umls:C0036341 | BeFree | Data from several recent studies have also converged showing that the val66met allele of BDNF, a common single nucleotide polymorphism (SNP), is associated with selective minor deficits in cognitive functioning in subjects with schizophrenia, bipolar illness, and normal controls. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 16513879 | 2571 | GAD1 | umls:C0036341 | BeFree | BDNF Val66Met polymorphism and GAD67 mRNA expression in the prefrontal cortex of subjects with schizophrenia. | 0.163034619 | 2006 | NA | NA | NA | NA | NA |
| rs386602118 | 18602732 | 627 | BDNF | umls:C0036341 | BeFree | This study investigated whether the brain-derived neurotrophic factor (BDNF) gene Val66Met single-nucleotide polymorphism (SNP) is associated with antipsychotic-induced tardive dyskinesia (TD) in schizophrenia. | 0.295766032 | 2008 | NA | NA | NA | NA | NA |
| rs386602118 | 16897602 | 1312 | COMT | umls:C0036341 | BeFree | Interaction between catechol-O-methyltransferase (COMT) Val108/158Met and brain-derived neurotrophic factor (BDNF) Val66Met polymorphisms in age at onset and clinical symptoms in schizophrenia. | 0.345417491 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 21641949 | 22854 | NTNG1 | umls:C0036341 | BeFree | This study aimed to investigate the potential association of netrin G1 (NTNG1) rs628117 and brain-derived neurotrophic factor (BDNF) Val66Met (rs6265) genetic polymorphisms with susceptibility to schizophrenia. | 0.131811416 | 2011 | NA | NA | NA | NA | NA |
| rs386602118 | 17289348 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor gene C-270T and Val66Met functional polymorphisms and risk of schizophrenia: a moderate-scale population-based study and meta-analysis. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602118 | 19359449 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor Val66Met polymorphism: association with psychopathological symptoms of schizophrenia? | 0.295766032 | 2009 | NA | NA | NA | NA | NA |
| rs386602118 | 23532065 | 627 | BDNF | umls:C0036341 | BeFree | Our data provide evidence that the BDNF Val66Met polymorphism may be involved in the etiology of schizophrenia in a Chinese Han population. | 0.295766032 | 2013 | NA | NA | NA | NA | NA |
| rs386602118 | 15543516 | 627 | BDNF | umls:C0036341 | BeFree | Association analysis of brain-derived neurotrophic factor (BDNF) gene Val66Met polymorphism in schizophrenia and bipolar affective disorder. | 0.295766032 | 2004 | NA | NA | NA | NA | NA |
| rs386602118 | 16649215 | 627 | BDNF | umls:C0036341 | BeFree | This variant and two previously reported BDNF SNPs (C270T and Val66Met) were genotyped in 295 patients with AD, 108 with AFDs, 96 with posttraumatic stress disorder (PTSD), 84 with schizophrenia, 327 with alcohol and/or drug dependence, and 250 normal control subjects. | 0.295766032 | 2006 | NA | NA | NA | NA | NA |
| rs386602118 | 24468644 | 627 | BDNF | umls:C0036341 | BeFree | The BDNF Val66Met polymorphism and plasma brain-derived neurotrophic factor levels in Han Chinese patients with bipolar disorder and schizophrenia. | 0.295766032 | 2014 | NA | NA | NA | NA | NA |
| rs386602118 | 24595507 | 627 | BDNF | umls:C0036341 | BeFree | Association between the brain-derived neurotrophic factor Val66Met polymorphism and therapeutic response to olanzapine in schizophrenia patients. | 0.295766032 | 2014 | NA | NA | NA | NA | NA |
| rs386602118 | 22477643 | 627 | BDNF | umls:C0036341 | BeFree | The aim of this study was to examine the association of the BDNF Val66Met polymorphism with cognition in patients with schizophrenia. | 0.295766032 | 2012 | NA | NA | NA | NA | NA |
| rs386602118 | 18056245 | 627 | BDNF | umls:C0036341 | BeFree | Association between brain-derived neurotrophic factor Val66Met gene polymorphism and progressive brain volume changes in schizophrenia. | 0.295766032 | 2007 | NA | NA | NA | NA | NA |
| rs386602147 | 25240594 | 1813 | DRD2 | umls:C0036341 | BeFree | The relationship between DRD2 gene polymorphisms (C957T and C939T) and schizophrenia: a meta-analysis. | 0.291131658 | 2014 | NA | NA | NA | NA | NA |
| rs386602276 | 19352591 | 2149 | F2R | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000814326 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 15802092 | 1813 | DRD2 | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.291131658 | 2005 | NA | NA | NA | NA | NA |
| rs386602276 | 21598376 | 3356 | HTR2A | umls:C0036341 | BeFree | Hypomethylation of the serotonin receptor type-2A Gene (HTR2A) at T102C polymorphic site in DNA derived from the saliva of patients with schizophrenia and bipolar disorder. | 0.341213463 | 2011 | NA | NA | NA | NA | NA |
| rs386602276 | 17924589 | 3356 | HTR2A | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.341213463 | 2008 | NA | NA | NA | NA | NA |
| rs386602276 | 19352591 | 3350 | HTR1A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.020431542 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 10686553 | 3356 | HTR2A | umls:C0036341 | BeFree | Recent studies have also shown an association between the allele C of 102T/C polymorphism in the 5-HT2A receptor gene and schizophrenia. | 0.341213463 | 2000 | NA | NA | NA | NA | NA |
| rs386602276 | 9694252 | 3356 | HTR2A | umls:C0036341 | BeFree | Negative association between T102C polymorphism of the 5-HT2a receptor gene and schizophrenia in Japan. | 0.341213463 | 1998 | NA | NA | NA | NA | NA |
| rs386602276 | 15882132 | 3356 | HTR2A | umls:C0036341 | BeFree | Recent studies suggest that the 5-hydroxytryptamine receptor 2A (5-HT2A) gene (HTR2A) T102C and G-1438A polymorphisms may influence treatment response of risperidone or olanzapine for schizophrenia's negative symptoms (e.g., blunted affect and social withdrawal). | 0.341213463 | 2005 | NA | NA | NA | NA | NA |
| rs386602276 | 19387614 | 3356 | HTR2A | umls:C0036341 | BeFree | This study investigated whether the efficacy of aripiprazole can be predicted by functional HTR2A A-1438G/T102C polymorphisms (rs63311/rs6313) as modified by clinical factors in Han Chinese hospitalized patients with acutely exacerbated schizophrenia. | 0.341213463 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 23857788 | 3356 | HTR2A | umls:C0036341 | BeFree | Our results suggest that the HTR2A T102C polymorphism may confer susceptibility to schizophrenia in Han Chinese. | 0.341213463 | 2012 | NA | NA | NA | NA | NA |
| rs386602276 | 20521326 | 3356 | HTR2A | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.341213463 | 2010 | NA | NA | NA | NA | NA |
| rs386602276 | 17924589 | 1814 | DRD3 | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.264470765 | 2008 | NA | NA | NA | NA | NA |
| rs386602276 | 15802092 | 3356 | HTR2A | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.341213463 | 2005 | NA | NA | NA | NA | NA |
| rs386602276 | 17069769 | 3356 | HTR2A | umls:C0036341 | BeFree | We performed primer extension assays to measure relative expression of allele-specific HTR2A transcripts in mRNAs isolated from the prefrontal cortex of 31 individuals with schizophrenia and from peripheral lymphocytes (PBLs) of 31 healthy individuals heterozygous for 102T/C. | 0.341213463 | 2006 | NA | NA | NA | NA | NA |
| rs386602276 | 17617023 | 3356 | HTR2A | umls:C0036341 | BeFree | Association between T102C and A-1438G polymorphisms in the serotonin receptor 2A (5-HT2A) gene and schizophrenia: relevance for treatment with antipsychotic drugs. | 0.341213463 | 2007 | NA | NA | NA | NA | NA |
| rs386602276 | 17407792 | 3356 | HTR2A | umls:C0036341 | BeFree | There was no genetic association between HTR2A T102C with either schizophrenia or bipolar disorder under the assumption of a parent-of-origin effect, and these data together essentially exclude imprinting at this locus as a potential explanation for the complex inheritance observed in major psychoses. | 0.341213463 | 2007 | NA | NA | NA | NA | NA |
| rs386602276 | 19545856 | 3356 | HTR2A | umls:C0036341 | BeFree | We have recently shown that the linked serotonin-2A receptor (5-HT(2A)R) A-1438 G and T102C polymorphisms modulate PPI in schizophrenia patients. | 0.341213463 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 10781645 | 3356 | HTR2A | umls:C0036341 | BeFree | Recently, a 5-HT2A receptor gene T102C polymorphism has been reported to be associated with clinical response to 5-HT2A receptor antagonist in patients with schizophrenia, suggesting this polymorphism of the gene affects the 5-HT2A receptor function. | 0.341213463 | 2000 | NA | NA | NA | NA | NA |
| rs386602276 | 20521326 | 3630 | INS | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.002171535 | 2010 | NA | NA | NA | NA | NA |
| rs386602276 | 17221840 | 3356 | HTR2A | umls:C0036341 | BeFree | Differential expression and parent-of-origin effect of the 5-HT2A receptor gene C102T polymorphism: analysis of suicidality in schizophrenia and bipolar disorder. | 0.341213463 | 2007 | NA | NA | NA | NA | NA |
| rs386602276 | 18783799 | 3356 | HTR2A | umls:C0036341 | BeFree | The serotonin 2A (5-HT2A) receptor gene has been implicated in the pathogenesis of suicidal behaviour by a genetic association between the 5-HT2A T102C silent polymorphism and suicidality in patients with mood disorders and schizophrenia. | 0.341213463 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 9259371 | 3356 | HTR2A | umls:C0036341 | BeFree | No association or linkage between the 5-HT2a/T102C polymorphism and schizophrenia in Irish families. | 0.341213463 | 1997 | NA | NA | NA | NA | NA |
| rs386602276 | 19352591 | 3356 | HTR2A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.341213463 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 19352591 | 7012 | TERC | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000542884 | 2009 | NA | NA | NA | NA | NA |
| rs386602276 | 17240119 | 3356 | HTR2A | umls:C0036341 | BeFree | Supportive evidence for the association between the T102C 5-HTR2A gene polymorphism and schizophrenia: a large-scale case-control and family-based study. | 0.341213463 | 2007 | NA | NA | NA | NA | NA |
| rs386602276 | 15048642 | 3356 | HTR2A | umls:C0036341 | BeFree | 102T/C SNP in the 5-hydroxytryptamine receptor 2A (HTR2A) gene and schizophrenia in two southern Han Chinese populations: lack of association. | 0.341213463 | 2004 | NA | NA | NA | NA | NA |
| rs386602276 | 15469201 | 3356 | HTR2A | umls:C0036341 | BeFree | No association of the T102C polymorphism of the serotonin 2A receptor gene (HTR2A) with suicidality in schizophrenia. | 0.341213463 | 2004 | NA | NA | NA | NA | NA |
| rs386602276 | 9264136 | 3356 | HTR2A | umls:C0036341 | BeFree | Our data do not support an allelic association between the 102T/C polymorphism of the 5-HT2A receptor gene and schizophrenia in Chinese population. | 0.341213463 | 1997 | NA | NA | NA | NA | NA |
| rs386602276 | 21912188 | 3356 | HTR2A | umls:C0036341 | BeFree | The aim of the study was to investigate whether the 5-HT2A receptor gene's polymorphisms (His452Tyr and T102C) have an influence on the response to olanzapine in patients with schizophrenia. | 0.341213463 | 2011 | NA | NA | NA | NA | NA |
| rs386602276 | 24962835 | 3356 | HTR2A | umls:C0036341 | BeFree | Association of the T102C polymorphism in the HTR2A gene with major depressive disorder, bipolar disorder, and schizophrenia. | 0.341213463 | 2014 | NA | NA | NA | NA | NA |
| rs386602280 | 9734554 | 3350 | HTR1A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.020431542 | 1998 | NA | NA | NA | NA | NA |
| rs386602280 | 9734554 | 3356 | HTR2A | umls:C0036341 | BeFree | The authors examined the frequencies of gene polymorphisms in the 5-HT1A (Arg219Leu) and 5-HT2A (Thr25Asn and His452Tyr) receptor genes in 29 patients previously diagnosed with neuroleptic malignant syndrome, 94 neuroleptic-treated patients with schizophrenia who had no history of neuroleptic malignant syndrome, and 94 healthy comparison subjects. | 0.341213463 | 1998 | NA | NA | NA | NA | NA |
| rs386602280 | 21912188 | 3356 | HTR2A | umls:C0036341 | BeFree | The aim of the study was to investigate whether the 5-HT2A receptor gene's polymorphisms (His452Tyr and T102C) have an influence on the response to olanzapine in patients with schizophrenia. | 0.341213463 | 2011 | NA | NA | NA | NA | NA |
| rs386602280 | 20521326 | 3630 | INS | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.002171535 | 2010 | NA | NA | NA | NA | NA |
| rs386602280 | 20521326 | 3356 | HTR2A | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.341213463 | 2010 | NA | NA | NA | NA | NA |
| rs3912494 | NA | 2272 | FHIT | umls:C0036341 | GAD | NA | 0.002638474 | NA | FHIT | 3 | 60021931 | C | G,T |
| rs3916966 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | NA | 13 | 105458546 | C | A |
| rs3916972 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | LOC105370345 | 13 | 105594285 | A | C |
| rs3918346 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | DAO | 12 | 108888108 | G | A |
| rs3918347 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | DAO | 12 | 108899544 | A | G |
| rs3924999 | 17631867 | 3084 | NRG1 | umls:C0036341 | BeFree | A missense mutation on rs3924999 of the neuregulin 1 gene may have a functional effect on prepulse inhibition in both schizophrenia and healthy control populations. | 0.330216746 | 2008 | NRG1 | 8 | 32595840 | G | A |
| rs3924999 | 15276238 | 3084 | NRG1 | umls:C0036341 | BeFree | Case-control and family-based association studies between the neuregulin 1 (Arg38Gln) polymorphism and schizophrenia. | 0.330216746 | 2004 | NRG1 | 8 | 32595840 | G | A |
| rs3952 | 15305146 | 9463 | PICK1 | umls:C0036341 | BeFree | Association study of PICK1 rs3952 polymorphism and schizophrenia. | 0.011897292 | 2004 | PICK1 | 22 | 38060591 | A | G |
| rs397507444 | 22813657 | 4524 | MTHFR | umls:C0036341 | BeFree | Association between MTHFR C677T and A1298C, and MTRR A66G polymorphisms and susceptibility to schizophrenia in a Syrian study cohort. | 0.218796007 | 2012 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 20044984 | 4524 | MTHFR | umls:C0036341 | BeFree | Our results suggest that deficient MTHFR enzyme activity in pregnant women, related to the A1298C variant, is associated with a higher risk of having offspring affected with schizophrenia. | 0.218796007 | 2010 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 16084002 | 4524 | MTHFR | umls:C0036341 | BeFree | Association of the C677T and A1298C polymorphisms of methylenetetrahydrofolate reductase gene with schizophrenia: association is significant in men but not in women. | 0.218796007 | 2005 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 20694488 | 4524 | MTHFR | umls:C0036341 | BeFree | Further evidence that methylenetetrahydrofolate reductase A1298C polymorphism is a risk factor for schizophrenia. | 0.218796007 | 2010 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 16641680 | 4524 | MTHFR | umls:C0036341 | BeFree | We measured the serum level of homocysteine/folate and methylenetetrahydrofolate reductase C677T/A1298C gene polymorphism in 235 patients with schizophrenia. | 0.218796007 | 2006 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 17074966 | 4524 | MTHFR | umls:C0036341 | BeFree | The authors performed a meta-analysis of studies examining the association between polymorphisms in the 5,10-methylenetetrahydrofolate reductase (MTHFR) gene, including MTHFR C677T and A1298C, and common psychiatric disorders, including unipolar depression, anxiety disorders, bipolar disorder, and schizophrenia. | 0.218796007 | 2007 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 22813657 | 4552 | MTRR | umls:C0036341 | BeFree | Association between MTHFR C677T and A1298C, and MTRR A66G polymorphisms and susceptibility to schizophrenia in a Syrian study cohort. | 0.002995792 | 2012 | MTHFR | 1 | 11794407 | T | G |
| rs397507444 | 21302350 | 4524 | MTHFR | umls:C0036341 | BeFree | Methylenetetrahydrofolate reductase (MTHFR) C677T and A1298C polymorphisms and age of onset in schizophrenia: a combined analysis of independent samples. | 0.218796007 | 2011 | MTHFR | 1 | 11794407 | T | G |
| rs403636 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | SLC6A3 | 5 | 1438239 | A | C |
| rs403636 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | SLC6A3 | 5 | 1438239 | A | C |
| rs409797 | NA | 4897 | NRCAM | umls:C0036341 | GAD | NA | 0.005005506 | NA | NRCAM | 7 | 108157415 | G | A |
| rs4129148 | 17522711 | 3563 | IL3RA | umls:C0036341 | GAD | [Sequencing of CSF2RA and its neighbor, IL3RA (interleukin 3 receptor alpha) in an independent case-control cohort revealed both common intronic haplotypes and several novel, rare missense variants associated with schizophrenia.] | 0.013364122 | 2007 | NA | Y;X | 1029445;1029445 | C | G |
| rs4129148 | 17522711 | 1438 | CSF2RA | umls:C0036341 | GAD | [Sequencing of CSF2RA and its neighbor, IL3RA (interleukin 3 receptor alpha) in an independent case-control cohort revealed both common intronic haplotypes and several novel, rare missense variants associated with schizophrenia.] | 0.010639772 | 2007 | NA | Y;X | 1029445;1029445 | C | G |
| rs4129585 | 25056061 | 203062 | TSNARE1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | TSNARE1 | 8 | 142231572 | A | C |
| rs4129585 | 23974872 | 203062 | TSNARE1 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | TSNARE1 | 8 | 142231572 | A | C |
| rs4238691 | NA | 1012 | CDH13 | umls:C0036341 | GAD | NA | 0.122367032 | NA | CDH13 | 16 | 83536276 | G | A |
| rs424232 | 23053058 | 4855 | NOTCH4 | umls:C0036341 | BeFree | Interestingly, a significant association was found for rs424232 (χ² = 9.404, P = 0.002, OR = 0.69, 95 % CI 0.54-0.88), which is a tag SNP for the DRB1*1303 allele and located near to the NOTCH4 gene that is a schizophrenia susceptibility locus confirmed by GWA studies. | 0.197169077 | 2013 | NA | 6 | 32240547 | C | T |
| rs4331145 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | NA | 11 | 643683 | T | C |
| rs4331145 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | NA | 11 | 643683 | T | C |
| rs433598 | 20185149 | 116285 | ACSM1 | umls:C0036341 | GAD | [ACSM1 has been identified as a susceptibility gene in a previous schizophrenia GWAS study.] | 0.005276948 | 2010 | ACSM1 | 16 | 20668884 | C | T |
| rs4342958 | NA | 150 | ADRA2A | umls:C0036341 | GAD | NA | 0.006362715 | NA | NA | 10 | 111434915 | G | T |
| rs4354668 | 24956246 | 6507 | SLC1A3 | umls:C0036341 | BeFree | To evaluate the effect of functional polymorphisms (rs4354668 and rs2731880) of the excitatory amino acid transporters (EAAT1 and 2) on the cognitive dysfunction that characterizes schizophrenia. | 0.008815624 | 2015 | SLC1A2 | 11 | 35419429 | T | G |
| rs4356203 | 21926974 | 5286 | PIK3C2A | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.122367032 | 2011 | PIK3C2A | 11 | 17138601 | A | G |
| rs4356203 | 21926974 | 5286 | PIK3C2A | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122367032 | 2011 | PIK3C2A | 11 | 17138601 | A | G |
| rs4357934 | NA | 1012 | CDH13 | umls:C0036341 | GAD | NA | 0.122367032 | NA | CDH13 | 16 | 83557612 | C | G |
| rs4379857 | 25043418 | 80331 | DNAJC5 | umls:C0036341 | BeFree | Analysis of 62 SNPs covering 6 CSP genes in 2019 Han Chinese (976 SCZ patients and 1043 healthy individuals) showed an association of two SNPs (rs4379857, P = 0.009, OR [95% CI]: 1.200 [1.379-1.046]; rs2238751, P = 0.023, OR [95% CI]: 1.253 [1.522-1.032]) with SCZ. | 0.000271442 | 2014 | OPCML;LOC102724644 | 11 | 133313709 | G | A |
| rs4388249 | 25056061 | 4124 | MAN2A1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | MAN2A1 | 5 | 109700365 | C | T |
| rs439401 | 22419519 | 7804 | LRP8 | umls:C0036341 | BeFree | HIMS replication analysis supported rs439401 (APOE regulatory region), and rs2297660 and rs3737983 (APOER2), with an effect on memory performance in normal aging subjects consistent with the findings in schizophrenia cases. | 0.002909916 | 2012 | NA | 19 | 44911194 | T | C |
| rs4402960 | 23656854 | 3481 | IGF2 | umls:C0036341 | BeFree | Patients with schizophrenia have an increased prevalence of type 2 diabetes mellitus, and type 2 diabetes mellitus has shown an association with the rs4402960 gene polymorphism in the insulin-like growth factor II messenger RNA (mRNA)-binding protein 2 gene (IGF2BP2). | 0.000814326 | 2013 | IGF2BP2 | 3 | 185793899 | G | T |
| rs4523957 | 23974872 | 63826 | SRR | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.214178448 | 2013 | SMG6;SRR | 17 | 2305605 | G | T |
| rs4523957 | 25056061 | 63826 | SRR | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.214178448 | 2014 | SMG6;SRR | 17 | 2305605 | G | T |
| rs4523957 | 25056061 | 23293 | SMG6 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122367032 | 2014 | SMG6;SRR | 17 | 2305605 | G | T |
| rs4523957 | 23974872 | 23293 | SMG6 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.122367032 | 2013 | SMG6;SRR | 17 | 2305605 | G | T |
| rs4532 | 17455212 | 1813 | DRD2 | umls:C0036341 | BeFree | One hundred thirty one outpatients in stable remission meeting the DSMIV criteria for schizophrenia spectrum disorders and receiving long-term maintenance therapy with haloperidol, fluphenazine, zuclopenthixole, or risperidone were genotyped for DRD1 A-48G, DRD2 Ins-141CDel, and DRD2 Ser311Cys polymorphisms. | 0.291131658 | 2007 | DRD1 | 5 | 175443147 | C | T |
| rs4532 | 23036699 | 1812 | DRD1 | umls:C0036341 | BeFree | We investigated the association of dopamine receptor D1 gene (DRD1) rs4532 polymorphism with antipsychotic treatment response in schizophrenia. | 0.151823507 | 2012 | DRD1 | 5 | 175443147 | C | T |
| rs4532 | 16397404 | 1812 | DRD1 | umls:C0036341 | BeFree | Dopamine receptor D1 gene -48A/G polymorphism is associated with bipolar illness but not with schizophrenia in a Polish population. | 0.151823507 | 2006 | DRD1 | 5 | 175443147 | C | T |
| rs4532 | 17455212 | 1812 | DRD1 | umls:C0036341 | BeFree | One hundred thirty one outpatients in stable remission meeting the DSMIV criteria for schizophrenia spectrum disorders and receiving long-term maintenance therapy with haloperidol, fluphenazine, zuclopenthixole, or risperidone were genotyped for DRD1 A-48G, DRD2 Ins-141CDel, and DRD2 Ser311Cys polymorphisms. | 0.151823507 | 2007 | DRD1 | 5 | 175443147 | C | T |
| rs4606 | 19931593 | 5997 | RGS2 | umls:C0036341 | BeFree | In this study, we investigated whether the rs4606 SNP in RGS2 alone also showed an effect on AIEPSs by utilizing the Drug-Induced Extrapyramidal Symptom Scale (DIEPSS) in 103 Japanese patients with schizophrenia. | 0.008001298 | 2010 | RGS2 | 1 | 192812042 | C | G,T |
| rs4606 | 19931593 | 6012 | RIEG2 | umls:C0036341 | BeFree | Association analysis between functional polymorphism of the rs4606 SNP in the RGS2 gene and antipsychotic-induced Parkinsonism in Japanese patients with schizophrenia: results from the Juntendo University Schizophrenia Projects (JUSP). | 0.000542884 | 2010 | RGS2 | 1 | 192812042 | C | G,T |
| rs4606 | 19931593 | 5997 | RGS2 | umls:C0036341 | GAD | [Association analysis between functional polymorphism of the rs4606 SNP in the RGS2 gene and antipsychotic-induced Parkinsonism in Japanese patients with schizophrenia: results from the Juntendo University Schizophrenia Projects (JUSP).] | 0.008001298 | 2010 | RGS2 | 1 | 192812042 | C | G,T |
| rs464094 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | NA | 16 | 32794543 | A | C |
| rs464094 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | NA | 16 | 32794543 | A | C |
| rs4646396 | 19647326 | 4582 | MUC1 | umls:C0036341 | BeFree | No association of the rs4646396 SNP in the PEMT locus with schizophrenia in a Chinese case-control sample. | 0.000542884 | 2009 | PEMT | 17 | 17529430 | G | A |
| rs4648845 | 25056061 | 9651 | PLCH2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PLCH2 | 1 | 2455662 | C | T |
| rs4680 | 23598060 | 51008 | ASCC1 | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.012486326 | 2013 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16109444 | 1312 | COMT | umls:C0036341 | BeFree | No association found between 158 Val/Met polymorphism of the COMT gene and schizophrenia with minor physical anomalies. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 21231925 | 1312 | COMT | umls:C0036341 | BeFree | Cannabis use profiles and COMT Val158Met genotypes were obtained from 80 inpatients with schizophrenia-spectrum disorders and 77 inpatients with other non-psychotic disorders. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 18789857 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-O-methyltransferase Val158Met polymorphism in relation to aggressive schizophrenia in a Korean population. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 21458532 | 1312 | COMT | umls:C0036341 | BeFree | No association between the Catechol-O-Methyltransferase (COMT) val158met polymorphism and cognitive improvement following cognitive remediation therapy (CRT) in schizophrenia. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22617427 | 1312 | COMT | umls:C0036341 | BeFree | Interaction between catechol-O-methyltransferase (COMT) Val158Met genotype and genetic vulnerability to schizophrenia during explicit processing of aversive facial stimuli. | 0.345417491 | 2013 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16984965 | 19 | ABCA1 | umls:C0036341 | BeFree | Here, we report the investigation of the differential activity of membrane-bound catechol-O-methyltransferase (MB-COMT) due to altered promoter methylation and the nature of the contribution of COMT Val158Met polymorphism as risk factors for schizophrenia and bipolar disorder by analyzing 115 post-mortem brain samples from the frontal lobe. | 0.003452799 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19666577 | 1312 | COMT | umls:C0036341 | BeFree | Epistasis between the DAT 3' UTR VNTR and the COMT Val158Met SNP on cortical function in healthy subjects and patients with schizophrenia. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17448448 | 1312 | COMT | umls:C0036341 | BeFree | Effect of catechol O-methyltransferase val(158)met polymorphism on the p50 gating endophenotype in schizophrenia. | 0.345417491 | 2007 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19585392 | 1312 | COMT | umls:C0036341 | BeFree | COMT Val 158 Met polymorphism is associated with cognitive flexibility in a signal discrimination task in schizophrenia. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 18407467 | 1312 | COMT | umls:C0036341 | BeFree | Moreover, variations in the COMT Val158Met functional polymorphism have been associated with prefrontal cognitive abnormalities among patients with schizophrenia, healthy relatives and controls. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 20483173 | 1312 | COMT | umls:C0036341 | BeFree | Association study of catechol-O-methyltransferase (COMT) gene Val158Met polymorphism with auditory P300 in Chinese Han patients with schizophrenia. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 12963670 | 1312 | COMT | umls:C0036341 | BeFree | Executive subprocesses in working memory: relationship to catechol-O-methyltransferase Val158Met genotype and schizophrenia. | 0.345417491 | 2003 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16037677 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-O-methyltransferase Val158Met polymorphism in schizophrenia: associations with cognitive and motor impairment. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16815691 | 1312 | COMT | umls:C0036341 | BeFree | Associations between COMT Val(158)Met genotype and RTV do not appear to reflect transmission of schizophrenia liability in families. | 0.345417491 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 21144115 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-O-methyltransferase Val(158)Met association with parahippocampal physiology during memory encoding in schizophrenia. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22128864 | 4524 | MTHFR | umls:C0036341 | BeFree | A functional interaction between Catechol-O-Methyltransferase (COMT) Val158Met and methylenetetrahydrofolate reductase (MTHFR) C677T has been shown to differentially affect cognition in patients with schizophrenia and healthy controls; the effect of COMT Val158Met × MTHFR interaction on resilience to stress in patients and controls remains to be examined. | 0.218796007 | 2012 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 20488458 | 1312 | COMT | umls:C0036341 | BeFree | Heterozygosity at catechol-O-methyltransferase Val158Met and schizophrenia: new data and meta-analysis. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19025226 | 1312 | COMT | umls:C0036341 | BeFree | Anhedonia as a phenotype for the Val158Met COMT polymorphism in relatives of patients with schizophrenia. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17448448 | 51008 | ASCC1 | umls:C0036341 | BeFree | Effect of catechol O-methyltransferase val(158)met polymorphism on the p50 gating endophenotype in schizophrenia. | 0.012486326 | 2007 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 24495967 | 1312 | COMT | umls:C0036341 | BeFree | We assessed catechol-O-methyltransferase (COMT) Val108/158Met (rs4680) and dopamine D2 receptor (DRD2) G-T (rs2283265) single nucleotide polymorphisms and functional magnetic resonance imaging during an emotional response inhibition test in 43 healthy adults and 27 people with schizophrenia to determine the extent to which COMT Val108/158Met and DRD2 G-T polymorphisms combine to influence prefrontal response to cognitive-affective challenges. | 0.345417491 | 2013 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19054502 | 1312 | COMT | umls:C0036341 | BeFree | Opposite effects of catechol-O-methyltransferase Val158Met on cortical function in healthy subjects and patients with schizophrenia. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 15965969 | 1312 | COMT | umls:C0036341 | BeFree | Based on the pivotal role ascribed to the prefrontal executive control network for absorbed attention and positive symptoms in schizophrenia, it was further hypothesized that Absorption is associated with the VAL158MET polymorphism of the catechol-O-methyltransferase (COMT) gene affecting the dopaminergic neurotransmitter system. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 20398774 | 1312 | COMT | umls:C0036341 | BeFree | COMT Val158Met polymorphism in relation to activation and de-activation in the prefrontal cortex: A study in patients with schizophrenia and healthy subjects. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16952445 | 1312 | COMT | umls:C0036341 | BeFree | Prefrontal dysfunction in schizophrenia controlling for COMT Val158Met genotype and working memory performance. | 0.345417491 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19329282 | 1312 | COMT | umls:C0036341 | BeFree | A common functional polymorphism, Val108/158Met (rs4680), and haplotypes rs737865-rs4680-rs165599 in the Catechol-O-methyltransferase gene (COMT) have been extensively examined for association to schizophrenia; however, results of replication studies have been inconsistent. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 20570494 | 57498 | KIDINS220 | umls:C0036341 | BeFree | COMT Val(158)Met polymorphism was studied with ARMS-PCR method in 99 outpatients with schizophrenia. | 0.000271442 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19207030 | 1312 | COMT | umls:C0036341 | BeFree | Our results demonstrated initial significant associations of two SNPs for DRD2 (rs11608185, genotype: chi(2) = 6.29, p-value = 0.043; rs6275, genotype: chi(2) = 8.91, p-value = 0.011), and one SNP in the COMT gene (rs4680, genotype: chi(2) = 6.67, p-value = 0.035 and allele: chi(2) = 4.75, p-value = 0.029; odds ratio: 1.33, 95% confidence interval: 1.02-1.73), but not after correction for multiple comparisons indicating a weak association of individual markers of DRD2 and COMT with schizophrenia. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 18562342 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-O-methyltransferase Val 158 Met polymorphism and antisaccade eye movements in schizophrenia. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 12372660 | 1312 | COMT | umls:C0036341 | BeFree | The findings provide independent support for the hypothesis that the catechol-O-methyltransferase Val(158)Met polymorphism influences neurocognitive function in schizophrenia, and suggest that the functional effects may be expressed on measures of Processing Speed and Attention. | 0.345417491 | 2002 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 24782165 | 1312 | COMT | umls:C0036341 | BeFree | Genetic association of catechol-O-methyltransferase val(158)met polymorphism in Saudi schizophrenia patients. | 0.345417491 | 2014 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17113268 | 1312 | COMT | umls:C0036341 | BeFree | The C957T polymorphism in the dopamine D2 receptor (DRD2) gene and the Val158Met polymorphism in the Catechol-O-Methyl-Transferase (COMT) gene affect dopamine transmission and have been found to be associated with schizophrenia. | 0.345417491 | 2007 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 23598060 | 1312 | COMT | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.345417491 | 2013 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22905266 | 1312 | COMT | umls:C0036341 | BeFree | A meta-analysis of the Val158Met COMT polymorphism and violent behavior in schizophrenia. | 0.345417491 | 2012 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 15118357 | 1312 | COMT | umls:C0036341 | BeFree | The COMT Val158Met polymorphism did not appear to significantly affect susceptibility, symptomatology, global cognitive function and prognosis in Chinese patients with schizophrenia, but the possible association with AOO merits further investigation. | 0.345417491 | 2004 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 18635674 | 1312 | COMT | umls:C0036341 | BeFree | These preliminary results imply that PPI is influenced by COMT Val(158)Met genotype in schizophrenia as well. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22208661 | 1312 | COMT | umls:C0036341 | BeFree | It is possible that the rs165774 SNP, in combination with rs4680, results in a common molecular variant of COMT that contributes to schizophrenia and alcohol dependence susceptibility. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17516763 | 1312 | COMT | umls:C0036341 | BeFree | The role of catechol-O-methyltransferase (COMT) val158met in prefrontal cortical deficits associated with the liability to schizophrenia remains controversial. | 0.345417491 | 2007 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 21999147 | 1312 | COMT | umls:C0036341 | BeFree | A common Val->Met polymorphism (rs4680) in the COMT gene, associated with increased prefrontal dopamine catabolism, impairs prefrontal cognition and might increase risk for schizophrenia. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19207030 | 1813 | DRD2 | umls:C0036341 | BeFree | Multifactor-dimensionality reduction analysis suggested a two locus model (rs6275/DRD2 and rs4680/COMT) as the best model for gene-gene interaction with 90% cross-validation consistency and 42.42% prediction error in predicting disease risk among schizophrenia patients. | 0.291131658 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16542182 | 1312 | COMT | umls:C0036341 | BeFree | A valine/methionine polymorphism of the catechol O-methyltransferase gene at amino acid 158 (COMT Val158Met polymorphism) has been identified as a risk factor for cognitive impairment in schizophrenia. | 0.345417491 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 24495967 | 1813 | DRD2 | umls:C0036341 | BeFree | We assessed catechol-O-methyltransferase (COMT) Val108/158Met (rs4680) and dopamine D2 receptor (DRD2) G-T (rs2283265) single nucleotide polymorphisms and functional magnetic resonance imaging during an emotional response inhibition test in 43 healthy adults and 27 people with schizophrenia to determine the extent to which COMT Val108/158Met and DRD2 G-T polymorphisms combine to influence prefrontal response to cognitive-affective challenges. | 0.291131658 | 2013 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22128864 | 1312 | COMT | umls:C0036341 | BeFree | A functional interaction between Catechol-O-Methyltransferase (COMT) Val158Met and methylenetetrahydrofolate reductase (MTHFR) C677T has been shown to differentially affect cognition in patients with schizophrenia and healthy controls; the effect of COMT Val158Met × MTHFR interaction on resilience to stress in patients and controls remains to be examined. | 0.345417491 | 2012 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 15583953 | 1312 | COMT | umls:C0036341 | BeFree | Negative association between catechol-O-methyltransferase (COMT) gene Val158Met polymorphism and persistent tardive dyskinesia in schizophrenia. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 20570494 | 1312 | COMT | umls:C0036341 | BeFree | COMT Val 158 Met polymorphism is related with interpersonal problem solving in schizophrenia. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16330500 | 1312 | COMT | umls:C0036341 | BeFree | Our findings suggest that the Val158Met polymorphism of the COMT gene might contribute to morphological abnormalities in schizophrenia. | 0.345417491 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16043283 | 1312 | COMT | umls:C0036341 | BeFree | COMT Val158Met polymorphism in schizophrenia with obsessive-compulsive disorder: a case-control study. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19647329 | 1312 | COMT | umls:C0036341 | BeFree | COMT val(158)met genotype and smooth pursuit eye movements in schizophrenia. | 0.345417491 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 15450787 | 1312 | COMT | umls:C0036341 | BeFree | Increased catechol-O-methyltransferase activity associated with variation in catechol-O-methyltransferase valine158 methionine genotypes may result in reduced dopamine neurotransmission in the prefrontal cortex and thus contribute to the poor performance of frontally mediated cognitive tasks and the occurrence of associated negative symptoms observed in patients with schizophrenia; however, reported associations between catechol-O-methyltransferase valine158 methionine genotypes and measures of cognition have not been consistent. | 0.345417491 | 2004 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 25600541 | 1312 | COMT | umls:C0036341 | BeFree | The relationship between catechol-O-methyltransferase gene Val158Met (COMT) polymorphism and premorbid cannabis use in Turkish male patients with schizophrenia. | 0.345417491 | 2015 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19666577 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Epistasis between the DAT 3' UTR VNTR and the COMT Val158Met SNP on cortical function in healthy subjects and patients with schizophrenia. | 0.265014156 | 2009 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17071544 | 1312 | COMT | umls:C0036341 | BeFree | Association study of COMT gene Val158Met polymorphism with auditory P300 and performance on neurocognitive tests in patients with schizophrenia and their relatives. | 0.345417491 | 2006 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 14754787 | 1312 | COMT | umls:C0036341 | BeFree | Catechol O-methyltransferase Val158Met polymorphism in schizophrenia: differential effects of Val and Met alleles on cognitive stability and flexibility. | 0.345417491 | 2004 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17383818 | 1312 | COMT | umls:C0036341 | BeFree | Influence of catechol-O-methyltransferase Val158Met polymorphism on neuropsychological and functional outcomes of classical rehabilitation and cognitive remediation in schizophrenia. | 0.345417491 | 2007 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 16387984 | 1312 | COMT | umls:C0036341 | BeFree | While it cannot be determined whether TBI influenced the association of COMT Val158Met to executive functioning, these data extend the known relationship of genotype to executive performance seen in healthy comparison subjects and individuals with schizophrenia to individuals with TBI. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 22148860 | 1312 | COMT | umls:C0036341 | BeFree | Effects of the val(158)met catechol-O-methyltransferase gene polymorphism on olfactory processing in schizophrenia. | 0.345417491 | 2012 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 18571901 | 1312 | COMT | umls:C0036341 | BeFree | Differential association of the COMT Val158Met polymorphism with clinical phenotypes in schizophrenia and bipolar disorder. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 17707347 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-O-methyltransferase (COMT) val(108/158)met (rs4680) is thought to affect dopamine regulated prefrontal cortical activity during working memory (WM) tasks, and to weakly increase risk for developing schizophrenia. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4680 | 19892319 | 1312 | COMT | umls:C0036341 | BeFree | Catechol-o-methyltransferase valine(158)methionine genotype and resting regional cerebral blood flow in medication-free patients with schizophrenia. | 0.345417491 | 2010 | COMT;MIR4761 | 22 | 19963748 | G | A |
| rs4687552 | 23974872 | 3699 | ITIH3 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.120542884 | 2013 | ITIH3 | 3 | 52804386 | T | C |
| rs4702 | 25056061 | 5045 | FURIN | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | FES;FURIN | 15 | 90883330 | G | A |
| rs4702 | 25056061 | 2242 | FES | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | FES;FURIN | 15 | 90883330 | G | A |
| rs4707436 | 21695734 | 56144 | PCDHA4 | umls:C0036341 | BeFree | In the present study, we investigated three polymorphisms (rs1049353, rs806368, and rs4707436) in the cannabinoid type 1 receptor gene (CNR1) and weight gain in Korean patients with schizophrenia receiving olanzapine treatment. | 0.003800186 | 2011 | CNR1 | 6 | 88142032 | G | A |
| rs4721295 | NA | 8379 | MAD1L1 | umls:C0036341 | GAD | NA | 0.122638474 | NA | MAD1L1 | 7 | 1997034 | T | G |
| rs475827 | 15694262 | 1791 | DNTT | umls:C0036341 | BeFree | The TDT for allelic association demonstrated that, in male, a weak association was detected in SNP rs475827 with p=0.0294, suggesting that the genetic polymorphisms within PLP1 in male are likely to confer an increased susceptibility to schizophrenia in the Chinese population. | 0.004071628 | 2005 | PLP1;LOC101928286 | X | 103775144 | G | A |
| rs4765905 | 24275578 | 641455 | POTEM | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000542884 | 2013 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 22688191 | 775 | CACNA1C | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.13497291 | 2012 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 24461634 | 3699 | ITIH3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.120542884 | 2013 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 21926974 | 775 | CACNA1C | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.13497291 | 2011 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 24461634 | 775 | CACNA1C | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.13497291 | 2013 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 24461634 | 288 | ANK3 | umls:C0036341 | BeFree | A history of suicide attempt was assessed in a sample of 1009 patients with BD, SCZ and related psychosis spectrum disorders, and associations with the joint genetic risk variants for BD and SCZ (rs2239547 (ITIH3/4-region), rs10994359 (ANK3) and rs4765905 (CACNA1C)) were investigated. | 0.12853425 | 2013 | CACNA1C | 12 | 2240418 | G | C |
| rs4765905 | 24275578 | 9790 | BMS1 | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000814326 | 2013 | CACNA1C | 12 | 2240418 | G | C |
| rs4766428 | 25056061 | 488 | ATP2A2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.120271442 | 2014 | ATP2A2 | 12 | 110285440 | C | T |
| rs4803480 | 21682944 | 90273 | CEACAM21 | umls:C0036341 | GWASCAT | DOCK4 and CEACAM21 as novel schizophrenia candidate genes in the Jewish population. | 0.120271442 | 2012 | CEACAM21 | 19 | 41559909 | G | A |
| rs4994 | 22609474 | 155 | ADRB3 | umls:C0036341 | BeFree | Possible impact of ADRB3 Trp64Arg polymorphism on BMI in patients with schizophrenia. | 0.002909916 | 2012 | ADRB3 | 8 | 37966280 | A | G |
| rs5177 | NA | 7804 | LRP8 | umls:C0036341 | GAD | NA | 0.002909916 | NA | LRP8 | 1 | 53246063 | G | A,C |
| rs5443 | 16139171 | 2784 | GNB3 | umls:C0036341 | BeFree | Suggestive association between the C825T polymorphism of the G-protein beta3 subunit gene (GNB3) and clinical improvement with antipsychotics in schizophrenia. | 0.019922334 | 2005 | GNB3;CDCA3 | 12 | 6845711 | C | T |
| rs548181 | 25579050 | 2917 | GRM7 | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.014906897 | 2014 | STT3A;STT3A-AS1 | 11 | 125591814 | A | G |
| rs548181 | 21926974 | 3703 | STT3A | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.122638474 | 2011 | STT3A;STT3A-AS1 | 11 | 125591814 | A | G |
| rs548181 | 25579050 | 5225 | PGC | umls:C0036341 | BeFree | Finally, a meta-analysis was conducted comparing our data with data from the Schizophrenia Psychiatric Genome-Wide Association Study Consortium (PGC-SCZ) that supported rs548181 (p=1.39×10(-7)). | 0.000814326 | 2014 | STT3A;STT3A-AS1 | 11 | 125591814 | A | G |
| rs548181 | 25579050 | 3703 | STT3A | umls:C0036341 | BeFree | Meta-analysis of this population of Indo-European and Dravidian ancestry identified three strongly associated variants with schizophrenia: STT3A (rs548181, p=1.47×10(-5)), NRG1 (rs17603876, p=8.66×10(-5)) and GRM7 (rs3864075, p=4.06×10(-3)). | 0.122638474 | 2014 | STT3A;STT3A-AS1 | 11 | 125591814 | A | G |
| rs548181 | 21926974 | 3703 | STT3A | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122638474 | 2011 | STT3A;STT3A-AS1 | 11 | 125591814 | A | G |
| rs55661361 | 25056061 | 4900 | NRGN | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.2512586 | 2014 | NRGN;LOC102724457 | 11 | 124744061 | G | A |
| rs55661361 | 25056061 | 102724457 | LOC102724457 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | NRGN;LOC102724457 | 11 | 124744061 | G | A |
| rs5573 | 23277265 | 4852 | NPY | umls:C0036341 | BeFree | Because NPY is a potent orexigenic peptide stimulating food intake, and genetic variation of the gene has been shown to influence development of obesity, we investigated the impact of NPY polymorphisms on antipsychotic-induced BWG.We analyzed 5 polymorphisms in the NPY gene (rs10551063, rs16147, rs5573, rs5574, and rs16475) in schizophrenia subjects (n = 226), treated mostly with clozapine and olanzapine for up to 14 weeks. | 0.015721222 | 2013 | NPY | 7 | 24285390 | G | A,C,T |
| rs5574 | 23277265 | 4852 | NPY | umls:C0036341 | BeFree | Because NPY is a potent orexigenic peptide stimulating food intake, and genetic variation of the gene has been shown to influence development of obesity, we investigated the impact of NPY polymorphisms on antipsychotic-induced BWG.We analyzed 5 polymorphisms in the NPY gene (rs10551063, rs16147, rs5573, rs5574, and rs16475) in schizophrenia subjects (n = 226), treated mostly with clozapine and olanzapine for up to 14 weeks. | 0.015721222 | 2013 | NPY | 7 | 24289514 | C | T |
| rs557881 | 21367462 | 6540 | SLC6A13 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A12 | 12 | 209959 | A | G |
| rs557881 | 21367462 | 6538 | SLC6A11 | umls:C0036341 | BeFree | We investigated the association of single nucleotide polymorphisms of solute carrier family 6 member 11 (SLC6A11) (rs2304725, rs2272400, and rs2245532), SLC6A12 (rs216250 and rs557881) and SLC6A13 (rs2289954) with schizophrenia and its clinical symptoms. | 0.000271442 | 2011 | SLC6A12 | 12 | 209959 | A | G |
| rs56205728 | 25056061 | 56924 | PAK6 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PAK6;BUB1B-PAK6 | 15 | 40275036 | G | A |
| rs56500751 | NA | 58508 | KMT2C | umls:C0036341 | GAD | NA | 0.002638474 | NA | NA | NA | NA | NA | NA |
| rs56873913 | 25056061 | 5639 | PRRG2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PRRG2 | 19 | 49587942 | T | G |
| rs583583 | 23382809 | 607 | BCL9 | umls:C0036341 | GWASCAT | BCL9 and C9orf5 are associated with negative symptoms in schizophrenia: meta-analysis of two genome-wide association studies. | 0.120542884 | 2013 | BCL9 | 1 | 147611315 | T | C |
| rs5905512 | 25073638 | 4129 | MAOB | umls:C0036341 | BeFree | The strongest association (p = 0.0004) was found between MAOB rs5905512, a SNP previously reported to be associated with schizophrenia in men, and MHPG concentrations in men with psychotic disorder. | 0.131172724 | 2014 | MAOB;LOC105373189 | X | 43867148 | A | G |
| rs5969786 | NA | 9248 | GPR50 | umls:C0036341 | GAD | NA | 0.005634266 | NA | NA | X | 151357349 | A | T |
| rs5992403 | 20471029 | 7353 | UFD1L | umls:C0036341 | GAD | [The UFD1L rs5992403 polymorphism is associated with age at onset of schizophrenia.] | 0.010639772 | 2010 | UFD1L;CDC45 | 22 | 19479363 | T | C |
| rs6002655 | 25056061 | 6942 | TCF20 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | TCF20 | 22 | 42207808 | C | T |
| rs6065094 | 25056061 | 26051 | PPP1R16B | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PPP1R16B | 20 | 38824551 | A | G |
| rs61758724 | 17448448 | 1312 | COMT | umls:C0036341 | BeFree | Effect of catechol O-methyltransferase val(158)met polymorphism on the p50 gating endophenotype in schizophrenia. | 0.345417491 | 2007 | ASCC1 | 10 | 72152888 | T | C |
| rs61758724 | 17448448 | 51008 | ASCC1 | umls:C0036341 | BeFree | Effect of catechol O-methyltransferase val(158)met polymorphism on the p50 gating endophenotype in schizophrenia. | 0.012486326 | 2007 | ASCC1 | 10 | 72152888 | T | C |
| rs6265 | 23923080 | 627 | BDNF | umls:C0036341 | BeFree | Association of the brain-derived neurotrophic factor gene G196A rs6265 polymorphisms and the cognitive function and clinical symptoms of schizophrenia. | 0.295766032 | 2013 | BDNF;BDNF-AS | 11 | 27658369 | C | T |
| rs6265 | 21641949 | 22854 | NTNG1 | umls:C0036341 | BeFree | This study aimed to investigate the potential association of netrin G1 (NTNG1) rs628117 and brain-derived neurotrophic factor (BDNF) Val66Met (rs6265) genetic polymorphisms with susceptibility to schizophrenia. | 0.131811416 | 2011 | BDNF;BDNF-AS | 11 | 27658369 | C | T |
| rs6265 | 24713399 | 627 | BDNF | umls:C0036341 | BeFree | Brain-derived neurotrophic factor blood levels are decreased in schizophrenia patients and associate with rs6265 genotypes. | 0.295766032 | 2014 | BDNF;BDNF-AS | 11 | 27658369 | C | T |
| rs6267 | 15645182 | 1312 | COMT | umls:C0036341 | BeFree | Association of Ala72Ser polymorphism with COMT enzyme activity and the risk of schizophrenia in Koreans. | 0.345417491 | 2005 | COMT;MIR4761 | 22 | 19962740 | G | A,T |
| rs6267 | 21860037 | 1312 | COMT | umls:C0036341 | BeFree | Recently, a new functional single-nucleotide polymorphism in the COMT gene, Ala72Ser, was found to be associated with homicidal behavior in schizophrenia, but this finding warrants further replication. | 0.345417491 | 2011 | COMT;MIR4761 | 22 | 19962740 | G | A,T |
| rs6267 | 18163386 | 1312 | COMT | umls:C0036341 | BeFree | New functional single nucleotide polymorphism (Ala72Ser) in the COMT gene is associated with aggressive behavior in male schizophrenia. | 0.345417491 | 2008 | COMT;MIR4761 | 22 | 19962740 | G | A,T |
| rs6275 | 19207030 | 1813 | DRD2 | umls:C0036341 | BeFree | Multifactor-dimensionality reduction analysis suggested a two locus model (rs6275/DRD2 and rs4680/COMT) as the best model for gene-gene interaction with 90% cross-validation consistency and 42.42% prediction error in predicting disease risk among schizophrenia patients. | 0.291131658 | 2009 | DRD2 | 11 | 113412755 | A | G |
| rs6275 | 25240594 | 1813 | DRD2 | umls:C0036341 | BeFree | The relationship between DRD2 gene polymorphisms (C957T and C939T) and schizophrenia: a meta-analysis. | 0.291131658 | 2014 | DRD2 | 11 | 113412755 | A | G |
| rs6275 | 19207030 | 1312 | COMT | umls:C0036341 | BeFree | Our results demonstrated initial significant associations of two SNPs for DRD2 (rs11608185, genotype: chi(2) = 6.29, p-value = 0.043; rs6275, genotype: chi(2) = 8.91, p-value = 0.011), and one SNP in the COMT gene (rs4680, genotype: chi(2) = 6.67, p-value = 0.035 and allele: chi(2) = 4.75, p-value = 0.029; odds ratio: 1.33, 95% confidence interval: 1.02-1.73), but not after correction for multiple comparisons indicating a weak association of individual markers of DRD2 and COMT with schizophrenia. | 0.345417491 | 2009 | DRD2 | 11 | 113412755 | A | G |
| rs6277 | 19158809 | 1813 | DRD2 | umls:C0036341 | BeFree | Case-control association study of 59 candidate genes reveals the DRD2 SNP rs6277 (C957T) as the only susceptibility factor for schizophrenia in the Bulgarian population. | 0.291131658 | 2009 | DRD2 | 11 | 113412737 | G | A |
| rs6280 | 12605094 | 1814 | DRD3 | umls:C0036341 | BeFree | Dopamine D3 receptor gene Ser9Gly variant and schizophrenia: association study and meta-analysis. | 0.264470765 | 2003 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 9491816 | 1814 | DRD3 | umls:C0036341 | BeFree | The dopamine D3 receptor (DRD3) Ser9Gly polymorphism and schizophrenia: a haplotype relative risk study and association with clozapine response. | 0.264470765 | 1998 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 17924589 | 3356 | HTR2A | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.341213463 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 17698325 | 1814 | DRD3 | umls:C0036341 | BeFree | No association between the DRD3 Ser9Gly polymorphism and schizophrenia. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 8641685 | 1814 | DRD3 | umls:C0036341 | BeFree | Allelic association between a Ser-9-Gly polymorphism in the dopamine D3 receptor gene and schizophrenia. | 0.264470765 | 1996 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 22940547 | 150 | ADRA2A | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.006362715 | 2013 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 11673801 | 1814 | DRD3 | umls:C0036341 | BeFree | We suggest that the DRD3 Ser9Gly polymorphism may be a contributing factor to the performance of eye movements used as a phenotypic marker of schizophrenia. | 0.264470765 | 2001 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 17171662 | 1814 | DRD3 | umls:C0036341 | BeFree | No association between the Ser9Gly polymorphism of the dopamine D3 receptor gene and schizophrenia in a Spanish sample. | 0.264470765 | 2007 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 18703116 | 1814 | DRD3 | umls:C0036341 | BeFree | Overall, our results suggest that the DRD3 Ser9Gly polymorphism may not confer susceptibility to SCZ in the Japanese population. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 22940547 | 1621 | DBH | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.024636535 | 2013 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 22940547 | 6616 | SNAP25 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.098088254 | 2013 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 18295456 | 1814 | DRD3 | umls:C0036341 | BeFree | The Ser9Gly polymorphism of the dopamine D3 receptor gene and risk of schizophrenia: an association study and a large meta-analysis. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 12497614 | 1813 | DRD2 | umls:C0036341 | BeFree | We investigate the association of the polymorphism of the Ser311Cys and Ser9Gly of the dopamine D2 (DRD2) and D3 receptor (DRD3) genes respectively with TD in Chinese patients with schizophrenia. | 0.291131658 | 2003 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 8780735 | 1814 | DRD3 | umls:C0036341 | BeFree | Proposed schizophrenia-related gene polymorphism: expression of the Ser9Gly mutant human dopamine D3 receptor with the Semliki Forest virus system. | 0.264470765 | 1996 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 18320559 | 1814 | DRD3 | umls:C0036341 | BeFree | Eighty-eight acutely ill patients with schizophrenia or schizoaffective disorder were genotyped for ser-9-gly (rs6280) and 23 other polymorphisms within the DRD-3 gene. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 17924589 | 1814 | DRD3 | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 22940547 | 1814 | DRD3 | umls:C0036341 | BeFree | Association was also evaluated by considering the polymorphisms as interactions; in this case, a likelihood ratio test (LRT) revealed evidence for association with schizophrenia in four polymorphism combinations: two DRD3*SNAP-25 combinations (rs6280*rs3746544 and rs6280*rs3746544, P=0.02), one ADRA2A*SNAP25 combination (rs1800544*rs3746544) and one ADRA2A*DBH combination (rs1800544*rs2519152). | 0.264470765 | 2013 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 19302829 | 1814 | DRD3 | umls:C0036341 | BeFree | We investigated whether the efficacy of aripiprazole can be predicted by a functional DRD3 gene polymorphism Ser9Gly (rs6280) as modified by clinical factors in Han Chinese hospitalized patients with acutely exacerbated schizophrenia. | 0.264470765 | 2009 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 18496209 | 1814 | DRD3 | umls:C0036341 | BeFree | In this study we examined the relationship between dopamine D2 receptor (DRD2) polymorphisms (TaqIA, TaqIB, -141C Ins/Del) and dopamine D3 receptor (DRD3) Ser9Gly polymorphism and the risk of schizophrenia in a Spanish population. | 0.264470765 | 2008 | DRD3 | 3 | 114171968 | C | T |
| rs6280 | 22172931 | 1814 | DRD3 | umls:C0036341 | BeFree | Genetic association between the dopamine D3 receptor gene polymorphism (Ser9Gly) and tardive dyskinesia in patients with schizophrenia: a reevaluation in East Asian populations. | 0.264470765 | 2012 | DRD3 | 3 | 114171968 | C | T |
| rs628117 | 21641949 | 22854 | NTNG1 | umls:C0036341 | BeFree | This study aimed to investigate the potential association of netrin G1 (NTNG1) rs628117 and brain-derived neurotrophic factor (BDNF) Val66Met (rs6265) genetic polymorphisms with susceptibility to schizophrenia. | 0.131811416 | 2011 | NTNG1 | 1 | 107454484 | C | T |
| rs6295 | 19352591 | 3356 | HTR2A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.341213463 | 2009 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 19352591 | 3350 | HTR1A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.020431542 | 2009 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 19352591 | 7012 | TERC | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000542884 | 2009 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 21399903 | 121278 | TPH2 | umls:C0036341 | BeFree | We aimed to investigate the associations of HTR1A C-1019G, HTR2A-1438A/G, TPH1 218A/C, and TPH2-703G/T variants with schizophrenia. | 0.004538567 | 2011 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 19747927 | 3350 | HTR1A | umls:C0036341 | BeFree | Huang and colleagues reported that rs6295 in HTR1A was associated with schizophrenia. | 0.020431542 | 2010 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 19352591 | 2149 | F2R | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000814326 | 2009 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 21399903 | 3350 | HTR1A | umls:C0036341 | BeFree | We aimed to investigate the associations of HTR1A C-1019G, HTR2A-1438A/G, TPH1 218A/C, and TPH2-703G/T variants with schizophrenia. | 0.020431542 | 2011 | HTR1A | 5 | 63962738 | C | G |
| rs6295 | 21399903 | 6999 | TDO2 | umls:C0036341 | BeFree | We aimed to investigate the associations of HTR1A C-1019G, HTR2A-1438A/G, TPH1 218A/C, and TPH2-703G/T variants with schizophrenia. | 0.004538567 | 2011 | HTR1A | 5 | 63962738 | C | G |
| rs6305 | 17420819 | 3356 | HTR2A | umls:C0036341 | BeFree | Association analysis between the C516T polymorphism in the 5-HT2A receptor gene and schizophrenia. | 0.341213463 | 2007 | HTR2A | 13 | 46892487 | G | A |
| rs6313 | 21598376 | 3356 | HTR2A | umls:C0036341 | BeFree | Hypomethylation of the serotonin receptor type-2A Gene (HTR2A) at T102C polymorphic site in DNA derived from the saliva of patients with schizophrenia and bipolar disorder. | 0.341213463 | 2011 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 20521326 | 3356 | HTR2A | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.341213463 | 2010 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17069769 | 3356 | HTR2A | umls:C0036341 | BeFree | We performed primer extension assays to measure relative expression of allele-specific HTR2A transcripts in mRNAs isolated from the prefrontal cortex of 31 individuals with schizophrenia and from peripheral lymphocytes (PBLs) of 31 healthy individuals heterozygous for 102T/C. | 0.341213463 | 2006 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17240119 | 3356 | HTR2A | umls:C0036341 | BeFree | Supportive evidence for the association between the T102C 5-HTR2A gene polymorphism and schizophrenia: a large-scale case-control and family-based study. | 0.341213463 | 2007 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15882913 | 3356 | HTR2A | umls:C0036341 | BeFree | We detected 7 single nucleotide polymorphisms (SNPs) on 13q14, one (rs6313) present at the HTR2A locus and the other 6 at the KPNA3 locus, among 124 British family trios consisting of mother, father and affected offspring with schizophrenia. | 0.341213463 | 2005 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17407792 | 3356 | HTR2A | umls:C0036341 | BeFree | There was no genetic association between HTR2A T102C with either schizophrenia or bipolar disorder under the assumption of a parent-of-origin effect, and these data together essentially exclude imprinting at this locus as a potential explanation for the complex inheritance observed in major psychoses. | 0.341213463 | 2007 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 24962835 | 3356 | HTR2A | umls:C0036341 | BeFree | Association of the T102C polymorphism in the HTR2A gene with major depressive disorder, bipolar disorder, and schizophrenia. | 0.341213463 | 2014 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19352591 | 2149 | F2R | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000814326 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17617023 | 3356 | HTR2A | umls:C0036341 | BeFree | Association between T102C and A-1438G polymorphisms in the serotonin receptor 2A (5-HT2A) gene and schizophrenia: relevance for treatment with antipsychotic drugs. | 0.341213463 | 2007 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19352591 | 3350 | HTR1A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.020431542 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19352591 | 3356 | HTR2A | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.341213463 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17924589 | 3356 | HTR2A | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.341213463 | 2008 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 10686553 | 3356 | HTR2A | umls:C0036341 | BeFree | Recent studies have also shown an association between the allele C of 102T/C polymorphism in the 5-HT2A receptor gene and schizophrenia. | 0.341213463 | 2000 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19545856 | 3356 | HTR2A | umls:C0036341 | BeFree | We have recently shown that the linked serotonin-2A receptor (5-HT(2A)R) A-1438 G and T102C polymorphisms modulate PPI in schizophrenia patients. | 0.341213463 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 23857788 | 3356 | HTR2A | umls:C0036341 | BeFree | Our results suggest that the HTR2A T102C polymorphism may confer susceptibility to schizophrenia in Han Chinese. | 0.341213463 | 2012 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 9259371 | 3356 | HTR2A | umls:C0036341 | BeFree | No association or linkage between the 5-HT2a/T102C polymorphism and schizophrenia in Irish families. | 0.341213463 | 1997 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15802092 | 1813 | DRD2 | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.291131658 | 2005 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 9264136 | 3356 | HTR2A | umls:C0036341 | BeFree | Our data do not support an allelic association between the 102T/C polymorphism of the 5-HT2A receptor gene and schizophrenia in Chinese population. | 0.341213463 | 1997 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15802092 | 3356 | HTR2A | umls:C0036341 | BeFree | Meta-analyses of pooled ORs support association of schizophrenia to the Ser311Cys polymorphism in DRD2 and the T102C polymorphism in HTR2A, and of attention deficit hyperactivity disorder to the 48-bp repeat in DRD4. | 0.341213463 | 2005 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15048642 | 3356 | HTR2A | umls:C0036341 | BeFree | 102T/C SNP in the 5-hydroxytryptamine receptor 2A (HTR2A) gene and schizophrenia in two southern Han Chinese populations: lack of association. | 0.341213463 | 2004 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15469201 | 3356 | HTR2A | umls:C0036341 | BeFree | No association of the T102C polymorphism of the serotonin 2A receptor gene (HTR2A) with suicidality in schizophrenia. | 0.341213463 | 2004 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 10781645 | 3356 | HTR2A | umls:C0036341 | BeFree | Recently, a 5-HT2A receptor gene T102C polymorphism has been reported to be associated with clinical response to 5-HT2A receptor antagonist in patients with schizophrenia, suggesting this polymorphism of the gene affects the 5-HT2A receptor function. | 0.341213463 | 2000 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17221840 | 3356 | HTR2A | umls:C0036341 | BeFree | Differential expression and parent-of-origin effect of the 5-HT2A receptor gene C102T polymorphism: analysis of suicidality in schizophrenia and bipolar disorder. | 0.341213463 | 2007 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 15882132 | 3356 | HTR2A | umls:C0036341 | BeFree | Recent studies suggest that the 5-hydroxytryptamine receptor 2A (5-HT2A) gene (HTR2A) T102C and G-1438A polymorphisms may influence treatment response of risperidone or olanzapine for schizophrenia's negative symptoms (e.g., blunted affect and social withdrawal). | 0.341213463 | 2005 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 20521326 | 3630 | INS | umls:C0036341 | BeFree | Forty-nine patients, with schizophrenia or schizoaffective disorder and treated with clozapine (n = 22) or olanzapine (n = 27), were evaluated for fasting levels of C-peptide, insulin and blood glucose, homeostasis model assessment index for insulin resistance (HOMA-IR) and body mass index (BMI), and genotyped for the -1438A/G, -783A/G, 102T/C, and His452Tyr polymorphisms of the HTR2A gene. | 0.002171535 | 2010 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 21912188 | 3356 | HTR2A | umls:C0036341 | BeFree | The aim of the study was to investigate whether the 5-HT2A receptor gene's polymorphisms (His452Tyr and T102C) have an influence on the response to olanzapine in patients with schizophrenia. | 0.341213463 | 2011 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19387614 | 3356 | HTR2A | umls:C0036341 | BeFree | This study investigated whether the efficacy of aripiprazole can be predicted by functional HTR2A A-1438G/T102C polymorphisms (rs63311/rs6313) as modified by clinical factors in Han Chinese hospitalized patients with acutely exacerbated schizophrenia. | 0.341213463 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 17924589 | 1814 | DRD3 | umls:C0036341 | BeFree | Could HTR2A T102C and DRD3 Ser9Gly predict clinical improvement in patients with acutely exacerbated schizophrenia? Results from treatment responses to risperidone in a naturalistic setting. | 0.264470765 | 2008 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 18783799 | 3356 | HTR2A | umls:C0036341 | BeFree | The serotonin 2A (5-HT2A) receptor gene has been implicated in the pathogenesis of suicidal behaviour by a genetic association between the 5-HT2A T102C silent polymorphism and suicidality in patients with mood disorders and schizophrenia. | 0.341213463 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 9694252 | 3356 | HTR2A | umls:C0036341 | BeFree | Negative association between T102C polymorphism of the 5-HT2a receptor gene and schizophrenia in Japan. | 0.341213463 | 1998 | HTR2A | 13 | 46895805 | G | A |
| rs6313 | 19352591 | 7012 | TERC | umls:C0036341 | BeFree | While further research into the molecular mechanisms underlying this interaction is needed, our results underscore the role of 5-HTR in PPI modulation and further implicate the 5-HTR1A G-1019C and the 5-HTR2A T102C polymorphisms in the pathophysiology of schizophrenia. | 0.000542884 | 2009 | HTR2A | 13 | 46895805 | G | A |
| rs6314 | 23842608 | 3356 | HTR2A | umls:C0036341 | BeFree | Our results suggest that HTR2A rs6314 affects 5-HT2AR expression and functionally contributes to genetic modulation of known endophenotypes of schizophrenia-like higher-level cognitive behaviors and related prefrontal activity, as well as response to treatment with olanzapine. | 0.341213463 | 2013 | HTR2A | 13 | 46834899 | G | A |
| rs63311 | 19387614 | 3356 | HTR2A | umls:C0036341 | BeFree | This study investigated whether the efficacy of aripiprazole can be predicted by functional HTR2A A-1438G/T102C polymorphisms (rs63311/rs6313) as modified by clinical factors in Han Chinese hospitalized patients with acutely exacerbated schizophrenia. | 0.341213463 | 2009 | NA | NA | NA | NA | NA |
| rs643410 | 23382809 | 23731 | TMEM245 | umls:C0036341 | GWASCAT | BCL9 and C9orf5 are associated with negative symptoms in schizophrenia: meta-analysis of two genome-wide association studies. | 0.120271442 | 2013 | TMEM245;LOC105376215 | 9 | 109037283 | A | C |
| rs6444931 | NA | 5010 | CLDN11 | umls:C0036341 | GAD | NA | 0.002638474 | NA | LOC105374214 | 3 | 170445686 | G | A |
| rs6461049 | 23974872 | 8379 | MAD1L1 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.122638474 | 2013 | MAD1L1 | 7 | 1977810 | C | T |
| rs6466055 | 25056061 | 6733 | SRPK2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | SRPK2 | 7 | 105288617 | A | C |
| rs6490121 | 21520349 | 4842 | NOS1 | umls:C0036341 | BeFree | The schizophrenia implicated NOS1 variants rs6490121 influences visual sensory processing as measured by the P1 response, either as part of the gene's pleiotropic effects on multiple aspects of brain function, or because of a primary influence on sensory processing that mediates the effects already seen in higher cognitive processes. | 0.233633843 | 2012 | NOS1 | 12 | 117270390 | G | A |
| rs6502097 | 22981886 | 1453 | CSNK1D | umls:C0036341 | BeFree | None of the SNPs showed a significant association with MDD, but a SNP (rs2075984) in CSNK1E and SNP (rs6502097) in CSNK1D were associated with SCZ (P=0.0091, uncorrected) and BD (P=0.030, uncorrected), respectively. | 0.002638474 | 2012 | SECTM1 | 17 | 82328303 | C | G |
| rs6603272 | 19281803 | 1791 | DNTT | umls:C0036341 | BeFree | Haplotype TDT was statistically significant (X(2)=5.14, df=1, P=0.023), with the rs6603272(T)-rs6645249(G) haplotype significantly associated with schizophrenia (OR=1.66; 95% CI=1.08-2.55). | 0.004071628 | 2009 | IL3RA;LOC101928032;LOC101928055 | Y;X | 1352245;1352245 | G | T |
| rs662 | 11880198 | 5444 | PON1 | umls:C0036341 | BeFree | Our results suggest that the Gln192Arg polymorphism of the PON1 gene may not be involved in the susceptibility to schizophrenia. | 0.005276948 | 2002 | PON1 | 7 | 95308134 | T | C |
| rs6627154 | NA | 9248 | GPR50 | umls:C0036341 | GAD | NA | 0.005634266 | NA | NA | X | 151324628 | A | G |
| rs6645249 | 19281803 | 1791 | DNTT | umls:C0036341 | BeFree | Haplotype TDT was statistically significant (X(2)=5.14, df=1, P=0.023), with the rs6603272(T)-rs6645249(G) haplotype significantly associated with schizophrenia (OR=1.66; 95% CI=1.08-2.55). | 0.004071628 | 2009 | IL3RA;LOC101928032;LOC101928055 | Y;X | 1356997;1356997 | A | G |
| rs6688 | 19481122 | 26985 | AP3M1 | umls:C0036341 | BeFree | Nominal association between rs6688 in the AP3M1 gene and schizophrenia (chi(2)=6.33, P=0.012, odds ratio=0.80) was no longer positive after correction for multiple testing (corrected P=0.192). | 0.002638474 | 2009 | AP3M1 | 10 | 74121918 | G | A |
| rs6691840 | 15897672 | 2899 | GRIK3 | umls:C0036341 | BeFree | A positive association between the ionotropic glutamate receptor kainate 3 gene (GRIK3) T928G polymorphism and schizophrenia has been reported, which suggests that people bearing G allele are at a higher risk for schizophrenia. | 0.018826635 | 2005 | GRIK3 | 1 | 36859876 | A | C,G |
| rs6691840 | 19921975 | 2899 | GRIK3 | umls:C0036341 | BeFree | Association between the ionotropic glutamate receptor kainate3 (GRIK3) Ser310Ala polymorphism and schizophrenia in the Indian population. | 0.018826635 | 2009 | GRIK3 | 1 | 36859876 | A | C,G |
| rs6691840 | 11986986 | 2899 | GRIK3 | umls:C0036341 | BeFree | Association between the ionotropic glutamate receptor kainate 3 (GRIK3) ser310ala polymorphism and schizophrenia. | 0.018826635 | 2002 | GRIK3 | 1 | 36859876 | A | C,G |
| rs6691840 | 19995671 | 2899 | GRIK3 | umls:C0036341 | BeFree | Are GRIK3 (T928G) gene variants in schizophrenia patients different from those in their first-degree relatives? | 0.018826635 | 2010 | GRIK3 | 1 | 36859876 | A | C,G |
| rs6703335 | 21926974 | 10806 | SDCCAG8 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.122638474 | 2011 | SDCCAG8 | 1 | 243445665 | A | G |
| rs6703335 | 21926974 | 10806 | SDCCAG8 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.122638474 | 2011 | SDCCAG8 | 1 | 243445665 | A | G |
| rs6704641 | 25056061 | 23314 | SATB2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | SATB2 | 2 | 199299529 | G | A |
| rs6704768 | 25056061 | 26058 | GIGYF2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | GIGYF2 | 2 | 232727791 | G | A |
| rs6782299 | 19571811 | 8087 | FXR1 | umls:C0036341 | GAD | [Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.] | 0.002367032 | 2009 | LOC101928882 | 3 | 180832914 | G | T |
| rs6782299 | 19571811 | 101928882 | LOC101928882 | umls:C0036341 | GWASCAT | Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. | 0.12 | 2009 | LOC101928882 | 3 | 180832914 | G | T |
| rs679087 | 25056061 | 83857 | TMTC1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.120542884 | 2014 | TMTC1 | 12 | 29764332 | C | T,A |
| rs6878284 | 23974872 | 133482 | SLCO6A1 | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.123452799 | 2013 | SLCO6A1 | 5 | 102434022 | C | T |
| rs6903874 | 17097106 | 25797 | QPCT | umls:C0036341 | BeFree | A three SNP haplotype consisting of alleles GCT from SNPs rs7452939, rs6903874 and rs6937506, respectively, was significantly over-represented in patients with schizophrenia (p = 0.0003) and bipolar disorder (p = 0.00002). | 0.120271442 | 2008 | NA | 6 | 132575771 | T | C |
| rs6932590 | 19571808 | 10279 | PRSS16 | umls:C0036341 | GAD | [Common variants conferring risk of schizophrenia.] | 0.005005506 | 2009 | NA | 6 | 27281152 | T | C |
| rs6937506 | 17097106 | 25797 | QPCT | umls:C0036341 | BeFree | A three SNP haplotype consisting of alleles GCT from SNPs rs7452939, rs6903874 and rs6937506, respectively, was significantly over-represented in patients with schizophrenia (p = 0.0003) and bipolar disorder (p = 0.00002). | 0.120271442 | 2008 | NA | 6 | 132578260 | G | A |
| rs6994992 | 24865593 | 3084 | NRG1 | umls:C0036341 | BeFree | Schizophrenia-risk variant rs6994992 in the neuregulin-1 gene on brain developmental trajectories in typically developing children. | 0.330216746 | 2014 | NRG1 | 8 | 31638065 | C | T |
| rs6994992 | 25858800 | 3084 | NRG1 | umls:C0036341 | BeFree | To determine the genetic association between qualitative and quantitative traits of autism spectrum disorder (ASD) and neuregulin 1 (NRG1)-a schizophrenia candidate gene-we examined six single nucleotide polymorphisms (SNPs) in NRG1 using a family-based association test (FBAT) in Korean families with ASD. rs35753505 and rs6994992 SNPs in NRG1 revealed a statistically significant family-based association with three quantitative traits for sociality. | 0.330216746 | 2015 | NRG1 | 8 | 31638065 | C | T |
| rs6994992 | 18543275 | 3084 | NRG1 | umls:C0036341 | BeFree | A polymorphism of the neuregulin 1 gene (SNP8NRG243177/rs6994992) affects reactivity to expressed emotion in schizophrenia. | 0.330216746 | 2009 | NRG1 | 8 | 31638065 | C | T |
| rs7004633 | 21926974 | 4325 | MMP16 | umls:C0036341 | GAD | [Genome-wide association study identifies five new schizophrenia loci.] | 0.002367032 | 2011 | NA | 8 | 88748082 | A | G |
| rs7017212 | 21679298 | 4482 | MSRA | umls:C0036341 | GAD | [Although the gene identified requires confirmation in an independent sample, the MSRA gene located on chromosome 8 was found to be associated with the phenotype of schizophrenia.] | 0.005276948 | 2011 | MSRA | 8 | 10165428 | G | T |
| rs7045881 | 20185149 | 9373 | PLAA | umls:C0036341 | GAD | [PLAA has not previously been described as a susceptibility gene, but 9p21 is implied as a schizophrenia linkage region.] | 0.002638474 | 2010 | PLAA | 9 | 26935998 | A | T |
| rs7085104 | 23974872 | 57412 | AS3MT | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | AS3MT;C10orf32-ASMT;LOC105378462 | 10 | 102869116 | A | G |
| rs7085104 | 23974872 | 100528007 | C10orf32-ASMT | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | AS3MT;C10orf32-ASMT;LOC105378462 | 10 | 102869116 | A | G |
| rs7121 | 16406317 | 2778 | GNAS | umls:C0036341 | BeFree | The T393C polymorphism of the GNAS1 gene is associated with deficit schizophrenia in an Italian population sample. | 0.085362824 | 2006 | GNAS | 20 | 58903752 | C | T |
| rs7125438 | NA | 4978 | OPCML | umls:C0036341 | GAD | NA | 0.002638474 | NA | OPCML | 11 | 132533016 | G | A |
| rs7192086 | 18677311 | 729993 | SHISA9 | umls:C0036341 | GAD | [Identification of loci associated with schizophrenia by genome-wide association and follow-up.] | 0.002367032 | 2008 | SHISA9 | 16 | 12967754 | T | A |
| rs7248363 | NA | 54858 | PGPEP1 | umls:C0036341 | GAD | NA | 0.002638474 | NA | PGPEP1 | 19 | 18357076 | T | C |
| rs7249617 | 21563301 | 4099 | MAG | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.013254501 | 2011 | MAG | 19 | 35305081 | C | G,T |
| rs7249617 | 21563301 | 57142 | RTN4 | umls:C0036341 | BeFree | Allelic tests showed nominally significant association of two RTN4 SNPs (P = 0.047 and 0.037 for rs11894868 and rs2968804, respectively) and two MAG SNPs (P = 0.034 and 0.029 for rs7249617 and rs16970218, respectively) with schizophrenia. | 0.13926983 | 2011 | MAG | 19 | 35305081 | C | G,T |
| rs7267348 | 25056061 | 5740 | PTGIS | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | PTGIS | 20 | 49514499 | T | C |
| rs730357 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA1 | 10 | 116259039 | T | C |
| rs731236 | 16634022 | 7421 | VDR | umls:C0036341 | BeFree | Four single-nucleotide polymorphisms (SNPs; rs10735810/FokI, rs1544410/BsmI, rs7975232/ApaI, and rs731236/TaqI) in the VDR gene were genotyped in 179 individuals with schizophrenia and 189 healthy controls. | 0.000542884 | 2006 | VDR;LOC105369749 | 12 | 47844974 | A | G |
| rs73229090 | 25056061 | 2989 | GULOP | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | NA | 8 | 27584610 | C | A |
| rs7341475 | 20434133 | 5649 | RELN | umls:C0036341 | BeFree | This study does not suggest a significant impact of rs7341475 on brain structure, function, and RELN expression, arguing that this single nucleotide polymorphism and others linked with it do not affect brain measures related to the biology of schizophrenia. | 0.370493034 | 2010 | RELN | 7 | 103764368 | G | A |
| rs7341475 | 18282107 | 5649 | RELN | umls:C0036341 | GWASCAT | Genome-wide association identifies a common variant in the reelin gene that increases the risk of schizophrenia only in women. | 0.370493034 | 2008 | RELN | 7 | 103764368 | G | A |
| rs7341475 | 20468075 | 5649 | RELN | umls:C0036341 | GAD | [Further investigation of the association between rs7341475 and rs17746501 and schizophrenia.] | 0.370493034 | 2010 | RELN | 7 | 103764368 | G | A |
| rs7341475 | 18282107 | 5649 | RELN | umls:C0036341 | GAD | [Genome-wide association identifies a common variant in the reelin gene that increases the risk of schizophrenia only in women.] | 0.370493034 | 2008 | RELN | 7 | 103764368 | G | A |
| rs737865 | 19329282 | 1312 | COMT | umls:C0036341 | BeFree | A common functional polymorphism, Val108/158Met (rs4680), and haplotypes rs737865-rs4680-rs165599 in the Catechol-O-methyltransferase gene (COMT) have been extensively examined for association to schizophrenia; however, results of replication studies have been inconsistent. | 0.345417491 | 2009 | COMT;TXNRD2 | 22 | 19942598 | A | G |
| rs737865 | 23598060 | 51008 | ASCC1 | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.012486326 | 2013 | COMT;TXNRD2 | 22 | 19942598 | A | G |
| rs737865 | 23598060 | 1312 | COMT | umls:C0036341 | BeFree | We find that P50 and PPI may be influenced by COMT rs4680 polymorphisms in schizophrenia; more excitingly, we find that P50 might be influenced by COMT rs737865 polymorphisms and PPI may be influenced by COMT rs165599 polymorphisms in schizophrenia, and their mutations are associated with the reduction of the risk of P50 or PPI defects in schizophrenia. | 0.345417491 | 2013 | COMT;TXNRD2 | 22 | 19942598 | A | G |
| rs74315401 | 12682740 | 5621 | PRNP | umls:C0036341 | BeFree | Neuropathological features of a case with schizophrenia and prion protein gene P102L mutation before onset of Gerstmann-Sträussler-Scheinker disease. | 0.010454206 | 2003 | PRNP | 20 | 4699525 | C | T |
| rs7432375 | 25056061 | 10274 | STAG1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | STAG1 | 3 | 136569563 | G | A |
| rs7452939 | 17097106 | 25797 | QPCT | umls:C0036341 | BeFree | A three SNP haplotype consisting of alleles GCT from SNPs rs7452939, rs6903874 and rs6937506, respectively, was significantly over-represented in patients with schizophrenia (p = 0.0003) and bipolar disorder (p = 0.00002). | 0.120271442 | 2008 | NA | NA | NA | NA | NA |
| rs746187 | 22239582 | 1610 | DAO | umls:C0036341 | BeFree | The aim of this study was therefore to examine the impact of G72 rs746187 and DAAO rs2111902 genotypes on brain function in schizophrenia, bipolar disorder and healthy volunteers. | 0.181352047 | 2012 | NA | 13 | 105346321 | A | G |
| rs746187 | 18165970 | 1610 | DAO | umls:C0036341 | BeFree | For each gene, we genotyped 213 cases and 197 controls for SNPs previously associated with schizophrenia: rs2111902 (MDAAO-4), rs3918346 (MDAAO-5), rs3741775 (MDAAO-6) and rs3918347 (MDAAO-7) in DAO and rs746187 (M7), rs3916966 (M13), rs2391191 (M15) and rs3916972 (M25) in G72. | 0.181352047 | 2008 | NA | 13 | 105346321 | A | G |
| rs74942016 | 20978455 | 3084 | NRG1 | umls:C0036341 | BeFree | No NRG1 V266L in Chinese patients with schizophrenia. | 0.330216746 | 2011 | NRG1 | 8 | 32754452 | G | A,T |
| rs749457 | 21874733 | 6531 | SLC6A3 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.265014156 | 2010 | ASTL | 2 | 96130205 | A | G |
| rs749457 | 21874733 | 1815 | DRD4 | umls:C0036341 | BeFree | Findings show a significant connection between 4 SNPs (ADRA2B rs749457, SLC6A3 rs464094, DRD4 rs11246226 and rs4331145) and schizophrenia, and 2 SNPs with suicidal attempt (ADRA2B rs1018351 i SLC6A3 rs403636). | 0.226108077 | 2010 | ASTL | 2 | 96130205 | A | G |
| rs75059851 | 25056061 | 22997 | IGSF9B | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | IGSF9B | 11 | 133952674 | A | G |
| rs7523273 | 25056061 | 407026 | MIR29C | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | MIR29B2;MIR29C;C1orf132 | 1 | 207803738 | A | G |
| rs7523273 | 25056061 | 407025 | MIR29B2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | MIR29B2;MIR29C;C1orf132 | 1 | 207803738 | A | G |
| rs7527939 | 23142968 | 55733 | HHAT | umls:C0036341 | GWASCAT | Whole-genome-wide association study in the Bulgarian population reveals HHAT as schizophrenia susceptibility gene. | 0.12 | 2013 | HHAT | 1 | 210362681 | C | T |
| rs7544736 | 19571811 | 58155 | PTBP2 | umls:C0036341 | GAD | [Common polygenic variation contributes to risk of schizophrenia and bipolar disorder.] | 0.002367032 | 2009 | NA | 1 | 96698787 | A | G |
| rs7556088 | 20347265 | 1432 | MAPK14 | umls:C0036341 | BeFree | We also demonstrated that this new variant ss178077483, combined with mir-30e rs7556088 and mir-24-MAPK14 rs3804452, showed a weak gene-gene interaction for schizophrenia risk (P=0.001). | 0.005276948 | 2010 | NFYC;MIR30E | 1 | 40754047 | G | A |
| rs756656 | 15861775 | 1326 | MAP3K8 | umls:C0036341 | BeFree | The PCR-based restriction fragment length polymorphism (PCR-RFLP) analysis was used to detect three single nucleotide polymorphisms (SNPs), rs165655 (A/G base change) and rs165815 (C/T base change) present in the ARVCF (armadillo repeat gene deletion in velocardiofacial syndrome) locus, and rs756656 (A/C base change) in the LOC128979 (expressed sequence tags, EST) locus, among 100 Chinese family trios consisting of fathers, mothers and affected offspring with schizophrenia. | 0.000814326 | 2005 | NA | 22 | 19592662 | A | C |
| rs7709645 | 22688191 | 57688 | ZSWIM6 | umls:C0036341 | GWASCAT | Genome-wide association study in a Swedish population yields support for greater CNV and MHC involvement in schizophrenia compared with bipolar disorder. | 0.12 | 2012 | ZSWIM6 | 5 | 61435631 | G | C |
| rs77149735 | 25056061 | 10806 | SDCCAG8 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122638474 | 2014 | SDCCAG8 | 1 | 243391803 | G | A |
| rs7726580 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA3 | 5 | 138272977 | G | A |
| rs7735699 | NA | 202333 | CMYA5 | umls:C0036341 | GAD | NA | 0.003181358 | NA | LOC102724557 | 5 | 79803641 | A | C |
| rs77502336 | 25056061 | 57476 | GRAMD1B | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | GRAMD1B | 11 | 123523928 | G | C |
| rs778293 | 18023149 | 282706 | DAOA-AS1 | umls:C0036341 | BeFree | Of 15 single nucleotide polymorphisms (SNPs) analyzed in the 95-kb G72/G30 gene region, M18/rs947267 and M22/rs778293 showed association with SCZ in Asians, and M24/rs1421292 with SCZ in Europeans. | 0.022870638 | 2008 | NA | 13 | 105516850 | C | T |
| rs778371 | 23974872 | 25791 | NGEF | umls:C0036341 | GWASCAT | Genome-wide association analysis identifies 13 new risk loci for schizophrenia. | 0.12 | 2013 | NGEF;C2orf82 | 2 | 232878399 | A | G |
| rs7825274 | NA | 4023 | LPL | umls:C0036341 | GAD | NA | 0.005276948 | NA | NA | 8 | 19984677 | G | C |
| rs7866602 | NA | 7099 | TLR4 | umls:C0036341 | GAD | NA | 0.005005506 | NA | NA | 9 | 118602525 | A | C |
| rs7893279 | 25056061 | 783 | CACNB2 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.120542884 | 2014 | CACNB2 | 10 | 18456176 | T | G |
| rs7902091 | 23358160 | 29119 | CTNNA3 | umls:C0036341 | GWASCAT | Significant interaction with maternal CMV infection was found for rs7902091 (P(SNP × CMV)=7.3 × 10(-7)) in CTNNA3, a gene not previously implicated in schizophrenia, stressing the importance of including environmental factors in genetic studies. | 0.120271442 | 2012 | CTNNA3 | 10 | 66838534 | C | A |
| rs7902091 | 23358160 | 29119 | CTNNA3 | umls:C0036341 | BeFree | Significant interaction with maternal CMV infection was found for rs7902091 (P(SNP × CMV)=7.3 × 10(-7)) in CTNNA3, a gene not previously implicated in schizophrenia, stressing the importance of including environmental factors in genetic studies. | 0.120271442 | 2012 | CTNNA3 | 10 | 66838534 | C | A |
| rs7914558 | 21926974 | 54805 | CNNM2 | umls:C0036341 | GWASCAT | Genome-wide association study identifies five new schizophrenia loci. | 0.120542884 | 2011 | CNNM2 | 10 | 103016151 | G | A |
| rs7914558 | 24311551 | 54805 | CNNM2 | umls:C0036341 | BeFree | Effects of a novel schizophrenia risk variant rs7914558 at CNNM2 on brain structure and attributional style. | 0.120542884 | 2014 | CNNM2 | 10 | 103016151 | G | A |
| rs7920934 | 20116071 | 2676 | GFRA3 | umls:C0036341 | BeFree | Furthermore, we found an overtransmission of the G-C GFRA1 rs7920934-rs730357 haplotype to subjects with schizophrenia and association of A-T-G-G GFRA3 rs10036665-rs10952-rs11242417-rs7726580 with schizophrenia in the case-control sample. | 0.000271442 | 2010 | GFRA1 | 10 | 116202914 | A | G |
| rs7975232 | 16634022 | 7421 | VDR | umls:C0036341 | BeFree | Four single-nucleotide polymorphisms (SNPs; rs10735810/FokI, rs1544410/BsmI, rs7975232/ApaI, and rs731236/TaqI) in the VDR gene were genotyped in 179 individuals with schizophrenia and 189 healthy controls. | 0.000542884 | 2006 | VDR;LOC105369749 | 12 | 47845054 | C | A |
| rs802568 | 20889312 | 26047 | CNTNAP2 | umls:C0036341 | BeFree | The third interesting SNP rs802568 was at 7q35 within CNTNAP2 (p=8.92 × 10(-4), 1.38 × 10(-5), and 1.62 × 10(-7) for schizophrenia, bipolar disorder and meta-analysis, respectively). | 0.127262917 | 2010 | CNTNAP2 | 7 | 146262151 | T | G |
| rs8042374 | 25056061 | 1136 | CHRNA3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.122638474 | 2014 | CHRNA3 | 15 | 78615690 | A | G |
| rs8044995 | 25056061 | 4775 | NFATC3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | NFATC3 | 16 | 68155437 | G | A |
| rs8057927 | 23358160 | 1012 | CDH13 | umls:C0036341 | GWASCAT | Genome-wide study of association and interaction with maternal cytomegalovirus infection suggests new schizophrenia loci. | 0.122367032 | 2012 | CDH13 | 16 | 82659207 | T | C |
| rs806368 | 21695734 | 56144 | PCDHA4 | umls:C0036341 | BeFree | In the present study, we investigated three polymorphisms (rs1049353, rs806368, and rs4707436) in the cannabinoid type 1 receptor gene (CNR1) and weight gain in Korean patients with schizophrenia receiving olanzapine treatment. | 0.003800186 | 2011 | CNR1 | 6 | 88140381 | T | C |
| rs8064946 | 15450681 | 788 | SLC25A20 | umls:C0036341 | BeFree | Though rs1042522 and rs8064946 did not show positive association with schizophrenia, we did observe statistically significant differences on SNP rs2078486 (P-value = 0.029; OR = 1.21; 95% CI 1.02-1.42) and on haplotype CAC (P-value = 0.0068; OR = 1.36; 95% CI 1.09-1.70). | 0.000542884 | 2004 | TP53;WRAP53 | 17 | 7685993 | G | C |
| rs8074995 | 21281445 | 2904 | GRIN2B | umls:C0036341 | BeFree | Three polymorphisms (GRIN2B rs220599, GRM3 rs2189814 and PRKCA rs8074995) were associated with episodic verbal memory in both control and patients with cognitive deficit, but not in cognitively spared patients or the pooled schizophrenia sample. | 0.162449467 | 2011 | PRKCA | 17 | 66796013 | G | A |
| rs8074995 | 21281445 | 5578 | PRKCA | umls:C0036341 | BeFree | Single nucleotide polymorphism (SNP) rs8074995 lies within the PRKCA region spanned by a rare haplotype associated with schizophrenia in a recent UK study and provides further evidence of PRKCA contribution to memory impairment and susceptibility to schizophrenia. | 0.005276948 | 2011 | PRKCA | 17 | 66796013 | G | A |
| rs8082590 | 25056061 | 79018 | GID4 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | GID4 | 17 | 18055088 | G | A |
| rs821616 | 25092219 | 27185 | DISC1 | umls:C0036341 | BeFree | The Disrupted-in-Schizophrenia-1 Ser704Cys polymorphism and brain neurodevelopmental markers in schizophrenia and healthy subjects. | 0.377872433 | 2014 | DISC1;TSNAX-DISC1 | 1 | 232008852 | A | T |
| rs821616 | 21998303 | 27185 | DISC1 | umls:C0036341 | BeFree | The schizophrenia risk variant S704C affects the formation of octamers of DISC1 and exhibits higher-order self-oligomerization. | 0.377872433 | 2011 | DISC1;TSNAX-DISC1 | 1 | 232008852 | A | T |
| rs821616 | 19304459 | 27185 | DISC1 | umls:C0036341 | BeFree | The Disrupted-in-Schizophrenia-1 Ser704Cys polymorphism and brain morphology in schizophrenia. | 0.377872433 | 2009 | DISC1;TSNAX-DISC1 | 1 | 232008852 | A | T |
| rs8283 | 14755442 | 1791 | DNTT | umls:C0036341 | BeFree | The TDT analysis demonstrated that of the nine SNPs, three were associated with schizophrenia, including rs1009382 (P = 0.00047), rs204887 (P = 0.007), and rs8283 (P = 0.015). | 0.004071628 | 2004 | ATF6B | 6 | 32115523 | A | G |
| rs832187 | 25056061 | 80145 | THOC7 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | THOC7;C3orf49 | 3 | 63847374 | C | T |
| rs832187 | 25056061 | 132200 | C3orf49 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | THOC7;C3orf49 | 3 | 63847374 | C | T |
| rs835784 | 22037552 | 387032 | ZKSCAN4 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.240542884 | 2011 | TSPAN18 | 11 | 44842267 | A | G |
| rs835784 | 22037552 | 222698 | NKAPL | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.243181358 | 2011 | TSPAN18 | 11 | 44842267 | A | G |
| rs835784 | 22037552 | 84547 | PGBD1 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.123452799 | 2011 | TSPAN18 | 11 | 44842267 | A | G |
| rs835784 | 22037552 | 90139 | TSPAN18 | umls:C0036341 | BeFree | We identified two susceptibility loci for schizophrenia at 6p21-p22.1 (rs1233710 in an intron of ZKSCAN4, P(combined) = 4.76 × 10(-11), odds ratio (OR) = 0.79; rs1635 in an exon of NKAPL, P(combined) = 6.91 × 10(-12), OR = 0.78; rs2142731 in an intron of PGBD1, P(combined) = 5.14 × 10(-10), OR = 0.79) and 11p11.2 (rs11038167 near the 5' UTR of TSPAN18, P(combined) = 1.09 × 10(-11), OR = 1.29; rs11038172, P(combined) = 7.21 × 10(-10), OR = 1.25; rs835784, P(combined) = 2.73 × 10(-11), OR = 1.27). | 0.242909916 | 2011 | TSPAN18 | 11 | 44842267 | A | G |
| rs869987 | NA | 7804 | LRP8 | umls:C0036341 | GAD | NA | 0.002909916 | NA | LRP8;LOC105378728 | 1 | 53257518 | G | T |
| rs882194 | 24275578 | 9790 | BMS1 | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000814326 | 2013 | CACNA1C | 12 | 2241286 | A | G |
| rs882194 | 24275578 | 641455 | POTEM | umls:C0036341 | BeFree | Further analysis of the haplotype rs1006737-rs4765905-rs882194 in CACNA1C showed significant associations with schizophrenia (corrected global p<0.005), and two haplotypes (ACC and ACT) in the block were significantly increased in the patients. | 0.000542884 | 2013 | CACNA1C | 12 | 2241286 | A | G |
| rs893703 | 18332876 | 5926 | ARID4A | umls:C0036341 | BeFree | The third best SNP (P=0.00016) is rs893703, within RBP1, a candidate gene for schizophrenia. | 0.000271442 | 2009 | RBP1;LOC100507291 | 3 | 139531807 | A | G |
| rs9272219 | 19571809 | 3117 | HLA-DQA1 | umls:C0036341 | GAD | [Common variants on chromosome 6p22.1 are associated with schizophrenia.] | 0.007101096 | 2009 | NA | 6 | 32634492 | G | T |
| rs936461 | 17763983 | 1815 | DRD4 | umls:C0036341 | BeFree | Linkage between the DRD4 and COMT genes and cognitive measures characterizing verbal memory, executive functions, and associative processes was studied in 150 patients with schizophrenia, 83 of their relatives, and 118 mentally healthy subjects without any family history of psychoses, with the aim of detecting the main effects of the polymorphic markers -809G/A and -521C/T (DRD4) and Val158Met (COMT) when present individually and together. | 0.226108077 | 2007 | DRD4 | 11 | 636496 | A | G |
| rs9370822 | 20951386 | 84062 | DTNBP1 | umls:C0036341 | BeFree | In summary, the present results provide preliminary support for dysbindin (DTNBP1) gene variation, particularly SNPs rs1997679 and rs9370822, to be associated with the clinical phenotype of psychotic depression suggesting a possible neurobiological mechanism for an intermediate trait on the continuum between affective disorders and schizophrenia. | 0.371141589 | 2011 | DTNBP1;LOC105374947 | 6 | 15544505 | A | C |
| rs9389370 | 19850283 | 27115 | PDE7B | umls:C0036341 | BeFree | Of 14 SNPs tested, one (rs9389370) in PDE7B showed significant evidence for association with schizophrenia in a discovery sample (p(allele) = .026 in JPN_1st, two-tailed). | 0.003181358 | 2010 | PDE7B;LOC644135 | 6 | 136110127 | C | G |
| rs9420 | 25056061 | 100528016 | TMX2-CTNND1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | C11orf31;TMX2-CTNND1 | 11 | 57742822 | A | G |
| rs9420 | 25056061 | 280636 | C11orf31 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | C11orf31;TMX2-CTNND1 | 11 | 57742822 | A | G |
| rs947267 | 18023149 | 282706 | DAOA-AS1 | umls:C0036341 | BeFree | Of 15 single nucleotide polymorphisms (SNPs) analyzed in the 95-kb G72/G30 gene region, M18/rs947267 and M22/rs778293 showed association with SCZ in Asians, and M24/rs1421292 with SCZ in Europeans. | 0.022870638 | 2008 | DAOA;DAOA-AS1 | 13 | 105487313 | T | G |
| rs950169 | 25056061 | 57188 | ADAMTSL3 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.120271442 | 2014 | ADAMTSL3 | 15 | 84037709 | C | T |
| rs9512730 | 18347602 | 219402 | MTIF3 | umls:C0036341 | GAD | [Genomewide association for schizophrenia in the CATIE study: results of stage 1.] | 0.002367032 | 2008 | NA | 13 | 27503007 | G | C |
| rs9607782 | 25056061 | 101927279 | EP300-AS1 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | EP300-AS1 | 22 | 41191552 | T | A |
| rs9636107 | 25056061 | 6925 | TCF4 | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.216525617 | 2014 | TCF4 | 18 | 55532886 | A | G |
| rs9653711 | 17964117 | 1267 | CNP | umls:C0036341 | BeFree | We found that genetic polymorphisms in CNP (rs2070106) and OLIG2 (rs1059004 and rs9653711), previously associated with schizophrenia, predicted low expression of these genes. | 0.022451187 | 2008 | OLIG2 | 21 | 33029641 | G | C |
| rs9836484 | 19023125 | 6092 | ROBO2 | umls:C0036341 | GAD | [Combining imaging and genetic data from a GWAS identified genes related to forebrain development and stress response, already implicated in schizophrenic dysfunction, as affecting prefrontal efficiency.] | 0.002367032 | 2009 | LOC105377171 | 3 | 77995538 | G | A |
| rs9841616 | 25056061 | 347689 | SOX2-OT | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.12 | 2014 | SOX2-OT | 3 | 181449797 | T | A |
| rs989638 | 18163426 | 788 | SLC25A20 | umls:C0036341 | BeFree | The analysis at the haplotype level showed that susceptibility to schizophrenia was associated with the specific haplotype rs989638-rs1034428-rs2227098 CAC (P = 0.0008). | 0.000542884 | 2008 | GRIA3 | X | 123239256 | C | T |
| rs9922678 | 25056061 | 2903 | GRIN2A | umls:C0036341 | GWASCAT | Biological insights from 108 schizophrenia-associated genetic loci. | 0.14162693 | 2014 | GRIN2A | 16 | 9852462 | G | A |
| rs9930750 | NA | 1012 | CDH13 | umls:C0036341 | GAD | NA | 0.122367032 | NA | CDH13 | 16 | 83555884 | C | T |
| rs9960767 | 24275585 | 6934 | TCF7L2 | umls:C0036341 | BeFree | Single nucleotide polymorphisms in TCF4 gene have been consistently associated with schizophrenia in genome wide association studies, including the C allele of rs9960767. | 0.009153079 | 2013 | TCF4 | 18 | 55487771 | A | C |
| rs9960767 | 21543597 | 6934 | TCF7L2 | umls:C0036341 | BeFree | The schizophrenia risk allele C of the TCF4 rs9960767 polymorphism disrupts sensorimotor gating in schizophrenia spectrum and healthy volunteers. | 0.009153079 | 2011 | TCF4 | 18 | 55487771 | A | C |
| rs9960767 | 19571808 | 6925 | TCF4 | umls:C0036341 | GAD | [Our findings implicating the MHC region are consistent with an immune component to schizophrenia risk, whereas the association with NRGN and TCF4 points to perturbation of pathways involved in brain development, memory and cognition.] | 0.216525617 | 2009 | TCF4 | 18 | 55487771 | A | C |
| rs9960767 | 19571808 | 6925 | TCF4 | umls:C0036341 | GWASCAT | Our findings implicating the MHC region are consistent with an immune component to schizophrenia risk, whereas the association with NRGN and TCF4 points to perturbation of pathways involved in brain development, memory and cognition. | 0.216525617 | 2009 | TCF4 | 18 | 55487771 | A | C |
| rs9960767 | 24718684 | 6934 | TCF7L2 | umls:C0036341 | BeFree | The analyses on the 28 individual SNPs previously associated with schizophrenia found that two SNPs in TCF4 returned a significant association with the SPEQ Paranoia dimension, rs17512836 (p-value = 2.57×10⁻⁴) and rs9960767 (p-value = 6.23×10⁻⁴). | 0.009153079 | 2014 | TCF4 | 18 | 55487771 | A | C |
GWASdb Annotation(Total Genotypes:0) | |
|---|---|
| (Waiting for update.) | |
GWASdb Snp Trait(Total Genotypes:4112) | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CHR | POS | SNPID | REF | ALT | ORI_SNPID | PMID | P_VALUE | P_VALUE_TEXT | OR/BETA | CI95_TEXT | GWAS_INITIAL_SAMPLE_SIZE | SUB_POPULATION | SUPER_POPULATION | GWAS_TRAIT | HPO_ID | HPO_TERM | DO_ID | DO_TERM | MESH_ID | MESH_TERM | EFO_ID | EFO_TERM | DOLITE_TERM | RISK_ALLELE | PUBLICATION_TYPE | AA | GENE_SYMBOL | TYPE | REFGENE |
| 1 | 2069681 | rs3753242 | C | T | rs3753242 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | PRKCZ |
| 1 | 5334637 | rs12732868 | T | G | rs12732868 | 21926974 | 4.55E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 8422676 | rs2252865 | T | C | rs2252865 | 21926974 | 3.00E-06 | NA | 1.08 | [1.04-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 8422676 | rs2252865 | T | C | rs2252865 | 23637625 | 0.000476 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 8495590 | rs172531 | A | G | rs172531 | 19571811 | 4.03E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | RERE |
| 1 | 9228624 | rs11802925 | T | C | rs11802925 | 19571809 | 9.09E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 9364634 | rs1294028 | A | G | rs1294028 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 11680283 | rs7550768 | C | T | rs7550768 | 21926974 | 1.96E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 11689663 | rs17037122 | A | G | rs17037122 | 19197363 | 5.20E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 11788564 | rs4846033 | A | G | rs4846033 | 18347602 | 4.00E-06 | 2.87 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | G | |
| 1 | 11814631 | rs1133398 | A | G | rs1133398 | 19197363 | 6.43E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 11856378 | rs1801133 | G | A | rs1801133 | 22037552 | 2.36E-07 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | MTHFR |
| 1 | 11856378 | rs1801133 | G | A | rs1801133 | 24043878 | 5.42E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1801133-A | Research Support, Non-U.S. Gov't | C | MTHFR |
| 1 | 12053264 | rs2878677 | T | C | rs2878677 | 19571811 | 1.61E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | MFN2 |
| 1 | 12194451 | rs1148472 | T | C | rs1148472 | 22883433 | 9.22E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 14254750 | rs6661262 | G | A | rs6661262 | 19197363 | 1.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 14947920 | rs11579756 | T | C | rs11579756 | 23637625 | 0.000117 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 15527323 | rs4661326 | C | T | rs4661326 | 20889312 | 4.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 17647475 | rs10788664 | C | T | rs10788664 | 22440650 | 0.00076 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | PADI4 |
| 1 | 17649796 | rs10888024 | A | G | rs10888024 | 22440650 | 0.000224 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | PADI4 |
| 1 | 17655407 | rs1748041 | C | T | rs1748041 | 22440650 | 0.000268 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | PADI4 |
| 1 | 17657534 | rs11203366 | G | A | rs11203366 | 22440650 | 0.000436 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | PADI4 |
| 1 | 17657616 | rs11203367 | T | C | rs11203367 | 22440650 | 0.000285 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | PADI4 |
| 1 | 17661996 | rs1748035 | T | C | rs1748035 | 22440650 | 0.000313 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | PADI4 |
| 1 | 17662662 | rs1748033 | T | C | rs1748033 | 22440650 | 0.000313 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | PADI4 |
| 1 | 18761124 | rs1336122 | A | G | rs1336122 | 20889312 | 8.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 18766761 | rs1568339 | C | A | rs1568339 | 20889312 | 2.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 19437923 | rs12740975 | G | A | rs12740975 | 19197363 | 6.43E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 19500551 | rs1009806 | T | C | rs1009806 | 19197363 | 8.07E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 20978024 | rs1573132 | C | A | rs1573132 | 19850283 | 3.20E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 1 | 22361845 | rs2473277 | G | A | rs2473277 | 19197363 | 5.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 22361845 | rs2473277 | G | A | rs2473277 | 19571811 | 3.75E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 1 | 23096818 | rs7516175 | A | C | rs7516175 | 19197363 | 5.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 23183130 | rs4654824 | C | T | rs4654824 | 19197363 | 5.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 23743296 | rs6682786 | A | G | rs6682786 | 19850283 | 7.30E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 1 | 23839769 | rs2282720 | A | G | rs2282720 | 19850283 | 1.68E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 1 | 24578011 | rs12407356 | G | A | rs12407356 | 20889312 | 3.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 26716136 | rs9438620 | C | T | rs9438620 | 19197363 | 8.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 28306250 | rs7529792 | C | T | rs7529792 | 19197363 | 8.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 29630956 | rs3737606 | A | G | rs3737606 | 20889312 | 5.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 29806634 | rs6426365 | A | G | rs6426365 | 19197363 | 3.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 30288207 | rs2166884 | G | A | rs2166884 | 19197363 | 1.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 30319889 | rs921197 | G | A | rs921197 | 19197363 | 8.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 30322046 | rs7512834 | C | T | rs7512834 | 19197363 | 3.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 30430366 | rs267700 | T | G | rs267700 | 20889312 | 3.11E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30431560 | rs1009080 | G | A | rs1009080 | 20889312 | 8.50E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30431560 | rs1009080 | G | A | rs1009080 | 21926974 | 3.00E-06 | NA | 1.09 | [1.05-1.13] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 30432219 | rs4949526 | T | C | rs4949526 | 20889312 | 4.00E-07 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30432219 | rs4949526 | T | C | rs4949526 | 23637625 | 0.000111 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 30529289 | rs11580589 | A | G | rs11580589 | 20889312 | 1.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30529446 | rs11580622 | A | C | rs11580622 | 20889312 | 7.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30530885 | rs391479 | T | C | rs391479 | 20889312 | 2.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30531039 | rs433112 | T | C | rs433112 | 20889312 | 1.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30532738 | rs391725 | C | A | rs391725 | 20889312 | 1.33E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30532849 | rs419527 | T | G | rs419527 | 20889312 | 1.33E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 30536711 | rs746758 | T | C | rs746758 | 20889312 | 3.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 32672932 | rs12032332 | G | A | rs12032332 | 19571808 | 1.60E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 32697934 | rs747020 | G | A | rs747020 | 19197363 | 7.54E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 32697934 | rs747020 | G | A | rs747020 | 19571808 | 8.20E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 34041191 | rs6701268 | T | G | rs6701268 | 21747397 | 1.43E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 35074860 | rs10914991 | A | T | rs10914991 | 21688384 | 8.76E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 1 | 35079250 | rs12117895 | G | A | rs12117895 | 21688384 | 4.01E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 1 | 35082968 | rs2147384 | A | C | rs2147384 | 21688384 | 3.62E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 1 | 35088484 | rs4653067 | C | A | rs4653067 | 21688384 | 2.97E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 1 | 35283939 | rs2145390 | T | C | rs2145390 | 22648509 | 1.85E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 35289039 | rs7526035 | G | A | rs7526035 | 22648509 | 9.00E-06 | NA | 1.29 | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 1 | 37162352 | rs589249 | A | G | rs589249 | 23894747 | 3.00E-07 | NA | 1.2 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs589249-G | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 37192677 | rs1002655 | C | G | rs1002655 | 19571811 | 3.20E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 1 | 39065974 | rs2985763 | G | A | rs2985763 | 20185149 | 1.64E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 1 | 39477635 | rs7538228 | T | G | rs7538228 | 19197363 | 4.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 39498491 | rs6663155 | G | A | rs6663155 | 19197363 | 4.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 39518006 | rs10465799 | G | A | rs10465799 | 19197363 | 3.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 40222660 | rs7553968 | G | C | rs7553968 | 22883433 | 8.82E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 40364803 | rs3134613 | C | A | rs3134613 | 19197363 | 8.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 40369232 | rs3117088 | T | C | rs3117088 | 19197363 | 7.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 40433771 | rs3103778 | A | G | rs3103778 | 19850283 | 3.29E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 1 | 40931003 | rs736861 | A | G | rs736861 | 19197363 | 5.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 41212950 | rs2274956 | G | A | rs2274956 | 19197363 | 5.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 41231057 | rs823682 | C | T | rs823682 | 19197363 | 6.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 42261889 | rs10493098 | T | C | rs10493098 | 19197363 | 6.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 42330585 | rs12734651 | C | A | rs12734651 | 19197363 | 3.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 44226657 | rs7520053 | A | G | rs7520053 | 23358160 | 8.93E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 44254586 | rs12741964 | G | A | rs12741964 | 23358160 | 1.12E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 44503040 | rs2485993 | A | G | rs2485993 | 24253340 | 8.60E-05 | NA | 1.28 | [1.14-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 44509551 | rs751442 | A | C | rs751442 | 24253340 | 8.78E-05 | NA | 1.28 | [1.14-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 44988433 | rs272531 | G | A | rs272531 | 19197363 | 3.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 45029679 | rs7525212 | G | A,T | rs7525212 | 19197363 | 3.92E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 47234335 | rs11583588 | G | A | rs11583588 | pha002859 | 6.44E-05 | phs000021 | 2.2 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 1 | 49451272 | rs3121514 | T | C | rs3121514 | 20889312 | 6.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 49566557 | rs7527364 | A | G | rs7527364 | 20889312 | 5.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 49591977 | rs483330 | G | A | rs483330 | 20889312 | 5.11E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 50891093 | rs7550594 | C | T | rs7550594 | 21926974 | 9.64E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 51709522 | rs12728955 | T | C | rs12728955 | 23358160 | 8.27E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 53701581 | rs2297656 | A | G | rs2297656 | 20889312 | 5.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 53707953 | rs17785382 | A | G | rs17785382 | 20889312 | 2.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 53707953 | rs17785382 | A | G | rs17785382 | pha002857 | 1.74E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | LOC100507564 | intron | NR_038953 |
| 1 | 53711735 | rs5177 | G | C | rs5177 | 20889312 | 8.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 53711735 | rs5177 | G | C | rs5177 | pha002857 | 5.00E-05 | phs000021 | 1.08 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | LRP8 | UTR-3 | NM_004631 |
| 1 | 53712727 | rs5174 | C | T | rs5174 | 21791550 | 3.40E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 1 | 53713549 | rs11206127 | G | A | rs11206127 | 20889312 | 4.25E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 53713549 | rs11206127 | G | A | rs11206127 | pha002857 | 3.16E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | LRP8 | intron | NM_004631 |
| 1 | 53723190 | rs869987 | G | T | rs869987 | 20889312 | 3.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 53723190 | rs869987 | G | T | rs869987 | pha002857 | 4.54E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | LRP8 | intron | NM_004631 |
| 1 | 53723349 | rs869988 | T | C | rs869988 | 20889312 | 5.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 55218155 | rs2108035 | C | T | rs2108035 | 19197363 | 7.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 55267509 | rs689322 | G | A | rs689322 | 21674006 | 6.94E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TTC22 |
| 1 | 56079739 | rs1392132 | T | G | rs1392132 | 20832056 | 1.84E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 57013198 | rs1041602 | C | T | rs1041602 | 19197363 | 4.06E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 57209695 | rs1156845 | T | C | rs1156845 | 21674006 | 1.99E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | C1orf168 |
| 1 | 57920416 | rs17426429 | G | A | rs17426429 | 20889312 | 9.11E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 58431135 | rs1343635 | T | C | rs1343635 | 19197363 | 8.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 58522420 | rs2764675 | T | G | rs2764675 | 20889312 | 2.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 59368947 | rs927743 | G | T | rs927743 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 60289241 | rs3767999 | T | G | rs3767999 | 19197363 | 2.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 61084790 | rs537110 | T | C | rs537110 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 63268989 | rs17316337 | A | G | rs17316337 | 22440650 | 0.000668 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | ATG4C |
| 1 | 64596766 | rs2762849 | T | C | rs2762849 | 20889312 | 2.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 64614011 | rs6588083 | T | C | rs6588083 | 19197363 | 9.49E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 65013586 | rs6681578 | T | C | rs6681578 | 21926974 | 5.06E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 65084275 | rs12407953 | G | C | rs12407953 | 21688384 | 9.65E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | CACHD1 |
| 1 | 65182826 | rs7530486 | T | C | rs7530486 | 20889312 | 9.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 65897747 | rs1887285 | A | G | rs1887285 | 19571809 | 2.90E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 66674738 | rs10493398 | G | A | rs10493398 | 21674006 | 6.07E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PDE4B |
| 1 | 68105186 | rs12129053 | G | A | rs12129053 | 24253340 | 3.29E-06 | NA | 1.51 | [1.27-1.80] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 73824909 | rs10789369 | A | G | rs10789369 | 23974872 | 4.00E-10 | NA | 1.1 | [1.07-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs10789369-A | Research Support, N.I.H., Extramural |
| 1 | 74339167 | rs11210359 | G | A | rs11210359 | 21057379 | 8.00E-06 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 74898117 | rs477159 | G | A | rs477159 | 22883433 | 3.38E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 74899573 | rs792884 | T | G | rs792884 | 22883433 | 1.57E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 74900897 | rs643371 | A | C | rs643371 | 22883433 | 9.87E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 74907316 | rs1325604 | G | A | rs1325604 | 22883433 | 8.50E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 79238015 | rs4650608 | T | C | rs4650608 | 23637625 | 0.000206 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 79238015 | rs4650608 | T | C | rs4650608 | 24280982 | 1.22E-05 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 1 | 79238015 | rs4650608 | T | C | rs4650608 | 24280982 | 1.77E-04 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 1 | 79238015 | rs4650608 | T | C | rs4650608 | 24280982 | 8.00E-09 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 1 | 80129920 | rs6698618 | C | T | rs6698618 | 20889312 | 1.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80134123 | rs7533906 | C | T | rs7533906 | 20889312 | 4.00E-06 | NA | 1.3 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80147123 | rs6681417 | G | A | rs6681417 | 20889312 | 3.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80150038 | rs1479739 | A | T | rs1479739 | 20889312 | 3.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80150181 | rs12076080 | T | C | rs12076080 | 20889312 | 1.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80150246 | rs10874059 | G | A | rs10874059 | 20889312 | 2.77E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80179889 | rs1524183 | G | A,C | rs1524183 | 19571809 | 8.63E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 80179889 | rs1524183 | G | A,C | rs1524183 | 20889312 | 1.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80179889 | rs1524183 | G | A,C | rs1524183 | pha002857 | 4.82E-05 | phs000021 | 1.55 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 1 | 80190866 | rs6424669 | G | C | rs6424669 | 20889312 | 2.55E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80199565 | rs6672282 | G | A | rs6672282 | 19571809 | 5.93E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 80199565 | rs6672282 | G | A | rs6672282 | 20889312 | 3.44E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80207766 | rs10874067 | A | T | rs10874067 | 20889312 | 2.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80218574 | rs7543390 | A | C | rs7543390 | 20889312 | 7.31E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80220979 | rs1464732 | A | C | rs1464732 | 19571809 | 4.90E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 80220979 | rs1464732 | A | C | rs1464732 | 20889312 | 5.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80233281 | rs3927739 | C | T | rs3927739 | 19571809 | 9.89E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 80233281 | rs3927739 | C | T | rs3927739 | 20889312 | 5.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 80285992 | rs7523939 | C | T | rs7523939 | 20832056 | 4.01E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 1 | 80289838 | rs11162830 | G | T | rs11162830 | 20832056 | 3.29E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 80324850 | rs6424675 | A | G | rs6424675 | 19571809 | 9.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 80324850 | rs6424675 | A | G | rs6424675 | 20889312 | 1.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 83857369 | rs4907021 | G | A | rs4907021 | 20889312 | 9.77E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 83871950 | rs2260390 | G | A | rs2260390 | 20889312 | 3.22E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 85316840 | rs4907103 | G | T | rs4907103 | 23637625 | 0.0000977 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 88071963 | rs6696952 | A | G | rs6696952 | 20832056 | 2.51E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 88413589 | rs10489945 | C | T | rs10489945 | 19197363 | 8.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 92957826 | rs7540564 | C | A | rs7540564 | 19571809 | 3.09E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 92975493 | rs4970700 | A | G | rs4970700 | 19571809 | 7.81E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93041906 | rs10782936 | A | G | rs10782936 | 19571809 | 8.11E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93074541 | rs6682801 | G | A | rs6682801 | 19571809 | 6.61E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93121107 | rs10735781 | G | C | rs10735781 | 19571809 | 6.97E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93303603 | rs6604026 | T | C | rs6604026 | 20889312 | 3.61E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93303603 | rs6604026 | T | C | rs6604026 | pha002857 | 1.01E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | RPL5 | intron | NM_000969 |
| 1 | 93304272 | rs10782945 | C | T | rs10782945 | 19571809 | 9.52E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93304272 | rs10782945 | C | T | rs10782945 | 20889312 | 5.88E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93304272 | rs10782945 | C | T | rs10782945 | pha002857 | 7.36E-06 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C,T | RPL5 | intron | NM_000969 |
| 1 | 93320869 | rs7514280 | C | T | rs7514280 | 20889312 | 1.36E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93320869 | rs7514280 | C | T | rs7514280 | pha002857 | 9.85E-06 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | FAM69A | intron | NM_001006605 |
| 1 | 93323971 | rs10874746 | T | C | rs10874746 | 19571809 | 3.51E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93323971 | rs10874746 | T | C | rs10874746 | 20889312 | 6.38E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93323971 | rs10874746 | T | C | rs10874746 | pha002857 | 3.17E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | FAM69A | intron | NM_001006605 |
| 1 | 93334138 | rs2811600 | C | T | rs2811600 | 19571809 | 8.28E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93334138 | rs2811600 | C | T | rs2811600 | 20889312 | 1.18E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93334138 | rs2811600 | C | T | rs2811600 | pha002857 | 1.59E-06 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | FAM69A | intron | NM_001006605 |
| 1 | 93343891 | rs2811593 | T | C | rs2811593 | 20889312 | 2.24E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93343891 | rs2811593 | T | C | rs2811593 | pha002857 | 2.91E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | FAM69A | intron | NM_001006605 |
| 1 | 93346928 | rs35183060 | A | T | rs35183060 | 20889312 | 1.52E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93346928 | rs35183060 | A | T | rs35183060 | pha002857 | 5.50E-06 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | FAM69A | intron | NM_001006605 |
| 1 | 93349046 | rs7536563 | A | G | rs7536563 | 19571809 | 5.09E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93349046 | rs7536563 | A | G | rs7536563 | 20889312 | 1.16E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93349046 | rs7536563 | A | G | rs7536563 | pha002857 | 2.24E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | FAM69A | intron | NM_001006605 |
| 1 | 93368309 | rs2255723 | G | T | rs2255723 | 20889312 | 1.39E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93368309 | rs2255723 | G | T | rs2255723 | pha002857 | 1.94E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | FAM69A | intron | NM_001006605 |
| 1 | 93375391 | rs12066638 | C | G | rs12066638 | 20889312 | 7.38E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93375391 | rs12066638 | C | G | rs12066638 | pha002857 | 3.64E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | FAM69A | intron | NM_001006605 |
| 1 | 93379093 | rs11164835 | G | A | rs11164835 | 20889312 | 9.84E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93379093 | rs11164835 | G | A | rs11164835 | pha002857 | 1.46E-06 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | FAM69A | intron | NM_001006605 |
| 1 | 93385136 | rs9651257 | T | C | rs9651257 | 20889312 | 2.02E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93385136 | rs9651257 | T | C | rs9651257 | pha002857 | 4.49E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | FAM69A | intron | NM_001006605 |
| 1 | 93395378 | rs11164838 | C | T | rs11164838 | 20889312 | 6.81E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93401837 | rs12745968 | A | G | rs12745968 | 19571809 | 8.97E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93401837 | rs12745968 | A | G | rs12745968 | 20889312 | 8.00E-07 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93401837 | rs12745968 | A | G | rs12745968 | pha002857 | 1.04E-06 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | FAM69A | intron | NM_001006605 |
| 1 | 93429087 | rs10874753 | C | A | rs10874753 | 20889312 | 1.85E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93429087 | rs10874753 | C | A | rs10874753 | pha002857 | 4.57E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 1 | 93438456 | rs514235 | T | C | rs514235 | 20889312 | 6.81E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93445417 | rs660870 | C | A | rs660870 | 19571809 | 4.81E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93445417 | rs660870 | C | A | rs660870 | 20889312 | 2.60E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93445417 | rs660870 | C | A | rs660870 | pha002857 | 3.16E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 1 | 93445497 | rs521428 | G | A | rs521428 | 19571809 | 5.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 93445497 | rs521428 | G | A | rs521428 | 20889312 | 2.52E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 93445497 | rs521428 | G | A | rs521428 | pha002857 | 4.57E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 1 | 95815863 | rs11165389 | T | G | rs11165389 | 22037555 | 3.47E-11 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 97113731 | rs11165690 | T | C | rs11165690 | 19571811 | 1.78E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 1 | 97113915 | rs12071951 | T | G | rs12071951 | 22688191 | 5.00E-07 | NA | 1.14 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 97164343 | rs7544736 | A | G | rs7544736 | 19571811 | 6.00E-07 | NA | 1.25 | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7544736-G | NA | A | NA |
| 1 | 98502934 | rs1625579 | G | T | rs1625579 | 21926974 | 2.00E-11 | NA | 1.12 | [1.09-1.16] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1625579-T | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 98502934 | rs1625579 | G | T | rs1625579 | 23637625 | 0.00000376 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 98552832 | rs1198588 | A | T | rs1198588 | 22688191 | 5.00E-07 | NA | 1.12 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 98552832 | rs1198588 | A | T | rs1198588 | 23974872 | 2.00E-12 | NA | 1.12 | [1.09-1.16] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1198588-T | Research Support, N.I.H., Extramural |
| 1 | 102263909 | rs10493976 | C | T | rs10493976 | 19197363 | 8.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 103238444 | rs11164597 | T | C | rs11164597 | 20832056 | 3.72E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 103389914 | rs4908274 | A | T | rs4908274 | 20832056 | 1.09E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | COL11A1 |
| 1 | 103541331 | rs11164661 | G | A | rs11164661 | 19571811 | 2.76E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | COL11A1 |
| 1 | 107432576 | rs12726652 | G | A | rs12726652 | 21107309 | 5.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 1 | 108123685 | rs1410403 | C | T | rs1410403 | 20832056 | 3.33E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | VAV3 |
| 1 | 111330896 | rs343810 | C | T | rs343810 | 20889312 | 8.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111393713 | rs6677149 | T | A | rs6677149 | 20889312 | 4.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111394866 | rs17688638 | T | C | rs17688638 | 20889312 | 3.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111395110 | rs17688644 | T | C | rs17688644 | 20889312 | 4.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111395388 | rs12566518 | G | T | rs12566518 | 20889312 | 4.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111401239 | rs11102170 | T | C | rs11102170 | 20889312 | 5.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111401704 | rs17637944 | T | C | rs17637944 | 20889312 | 2.54E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 111404291 | rs6696248 | T | C | rs6696248 | 20889312 | 4.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 112234084 | rs10489469 | G | T | rs10489469 | 19197363 | 8.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 114715584 | rs2774292 | G | A | rs2774292 | 20889312 | 3.00E-06 | NA | 2.09 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 115861265 | rs7523654 | T | C | rs7523654 | 20889312 | 7.14E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 115869089 | rs4839436 | G | C | rs4839436 | 20889312 | 1.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 115873047 | rs10776799 | G | T | rs10776799 | 20889312 | 6.31E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 115875645 | rs4332358 | C | T | rs4332358 | 20889312 | 5.00E-06 | NA | 1.26 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 115877624 | rs17033706 | G | A | rs17033706 | 20889312 | 8.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 117231902 | rs568359 | T | C | rs568359 | 20832056 | 1.69E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 117483361 | rs4641299 | G | A | rs4641299 | 19850283 | 4.27E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 1 | 119002799 | rs1146335 | C | T | rs1146335 | 19197363 | 6.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 119013403 | rs1146324 | T | C | rs1146324 | 19197363 | 4.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 119016240 | rs1146320 | A | C | rs1146320 | 19197363 | 3.79E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 119023640 | rs1229119 | C | T | rs1229119 | 19197363 | 2.91E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 119026090 | rs1146313 | C | T | rs1146313 | 19197363 | 2.16E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 119034534 | rs12408596 | T | C | rs12408596 | 19197363 | 2.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 119106612 | rs17257972 | G | A | rs17257972 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 119133609 | rs4329498 | T | C | rs4329498 | 19197363 | 1.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 119272779 | rs10923658 | G | A | rs10923658 | 19197363 | 4.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 119318683 | rs1853774 | C | T | rs1853774 | 19197363 | 4.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 119344903 | rs2485961 | T | C | rs2485961 | 19197363 | 7.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 119383818 | rs1766803 | T | C | rs1766803 | 19197363 | 1.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 119406760 | rs1766807 | A | G | rs1766807 | 19197363 | 6.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 120023971 | rs911244 | C | T | rs911244 | 20889312 | 7.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 147083114 | rs583583 | C | T | rs583583 | 23382809 | 6.00E-07 | NA | 1.3 | NA | 1,774 European ancestry cases; 2,726 European ancestry controls | European(4500) | ALL(4500) | EUR(4500) | ALL(4500) | Schizophrenia (negative symptoms) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs583583-A | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 150246070 | rs12138787 | T | C | rs12138787 | 19197363 | 3.06E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 150257262 | rs942453 | A | G | rs942453 | 19197363 | 1.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 150262455 | rs12139286 | G | A | rs12139286 | 19571811 | 6.53E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 1 | 150498138 | rs12132918 | C | T | rs12132918 | 19197363 | 1.38E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 152538358 | rs17659359 | G | C | rs17659359 | 20185149 | 2.48E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 1 | 154713341 | rs1506985 | T | C | rs1506985 | 22883433 | 4.66E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 154714006 | rs4999127 | G | A | rs4999127 | 22883433 | 2.06E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 156127368 | rs12128066 | T | C | rs12128066 | 20889312 | 2.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 158741903 | rs7513257 | A | T | rs7513257 | 21688384 | 6.43E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 1 | 160626061 | rs10218843 | A | G | rs10218843 | 22479419 | 3.84E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 160630143 | rs11265461 | T | C | rs11265461 | 22479419 | 2.00E-07 | NA | 1.45 | [1.26-1.67] | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs11265461-C | Research Support, Non-U.S. Gov't | C | NA |
| 1 | 160735814 | rs574491 | A | G | rs574491 | 20832056 | 4.78E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 1 | 160738146 | rs528095 | T | C | rs528095 | 20832056 | 3.59E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 1 | 161054054 | rs3892375 | T | C | rs3892375 | 20832056 | 3.41E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PVRL4 |
| 1 | 161967681 | rs2499836 | A | G | rs2499836 | 24253340 | 8.58E-05 | NA | 1.33 | [1.16-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 162091284 | rs12140791 | C | T | rs12140791 | pha002857 | 5.12E-05 | phs000021 | 1.68 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NOS1AP | intron | NM_014697 |
| 1 | 162108265 | rs4657155 | C | A | rs4657155 | 20889312 | 3.38E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 162195738 | rs4657175 | T | G | rs4657175 | 23212062 | 7.24E-10 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 1 | 163009498 | rs2842006 | T | C | rs2842006 | 19197363 | 7.71E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 163031580 | rs2661275 | T | C | rs2661275 | 20832056 | 3.72E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 163031621 | rs2661274 | C | T | rs2661274 | 20832056 | 2.83E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 164412847 | rs1289726 | G | T | rs1289726 | 19197363 | 1.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 164934462 | rs4275431 | G | A | rs4275431 | 19571808 | 1.50E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 164958641 | rs1573182 | A | G | rs1573182 | 19571808 | 3.20E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 164968421 | rs1419070 | A | C | rs1419070 | 19571808 | 9.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 165036995 | rs10494430 | T | C | rs10494430 | 19571809 | 5.99E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 167903079 | rs10489202 | G | T | rs10489202 | 22037555 | 1.00E-08 | NA | 1.23 | [1.15-1.32] | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs10489202-A | Research Support, Non-U.S. Gov't | G | BRP44 |
| 1 | 168982164 | rs6665379 | G | A | rs6665379 | 21688384 | 1.26E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 1 | 169070450 | rs12061601 | T | C | rs12061601 | 23212062 | 5.88E-10 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 1 | 171079005 | rs16864042 | G | T | rs16864042 | 20185149 | 8.71E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 1 | 171083242 | rs2266780 | A | G | rs2266780 | 20185149 | 1.13E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 1 | 171110869 | rs2281006 | G | T | rs2281006 | 20185149 | 2.10E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 1 | 171116760 | rs7063044 | C | T | rs7063044 | 20185149 | 9.00E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 1 | 171117113 | rs6608452 | C | T | rs6608452 | 20185149 | 9.73E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 1 | 171117341 | rs7879557 | A | T | rs7879557 | 20185149 | 5.51E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 1 | 171680631 | rs12081515 | A | G | rs12081515 | 20889312 | 8.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 175289399 | rs875326 | C | T | rs875326 | 18521090 | 2.10E-05 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 1 | 175440469 | rs7548041 | C | T | rs7548041 | 20889312 | 6.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 175531634 | rs10913008 | G | A | rs10913008 | 19197363 | 2.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 175904809 | rs6687849 | C | T | rs6687849 | 20889312 | 6.22E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 175930886 | rs1357338 | A | G | rs1357338 | 20889312 | 9.15E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 175932662 | rs6704250 | G | C | rs6704250 | 20889312 | 3.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 176044121 | rs2481653 | A | C | rs2481653 | 20889312 | 5.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 177355133 | rs10429832 | C | T | rs10429832 | 19850283 | 1.93E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 1 | 177652462 | rs1885646 | A | G | rs1885646 | 21674006 | 1.01E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 177722907 | rs12140439 | C | A | rs12140439 | 23894747 | 1.00E-06 | EA | 1.3 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12140439-C | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 1 | 178686331 | rs16853302 | A | C | rs16853302 | 19197363 | 4.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 179452275 | rs10494520 | G | A | rs10494520 | 21674006 | 6.74E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | AXDND1 |
| 1 | 181433468 | rs6424813 | G | A | rs6424813 | 24253340 | 8.61E-05 | NA | 1.27 | [1.12-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 182744205 | rs7540658 | A | C | rs7540658 | 21926974 | 3.23E-04 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 183272295 | rs6687056 | T | C | rs6687056 | 19197363 | 8.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 184919549 | rs234091 | T | A | rs234091 | 19850283 | 2.00E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 1 | 186632317 | rs10911902 | C | T | rs10911902 | 18347602 | 2.00E-06 | 1.79 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | C | |
| 1 | 187247150 | rs2453727 | C | T | rs2453727 | 19197363 | 4.72E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 187760345 | rs1476901 | T | C | rs1476901 | 19571809 | 8.88E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 189786171 | rs1517100 | G | A | rs1517100 | 21674006 | 8.18E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 1 | 192549912 | rs2760535 | G | A | rs2760535 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 194025452 | rs1442421 | C | T | rs1442421 | 19571809 | 8.55E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 196004403 | rs12128800 | T | A | rs12128800 | 20889312 | 1.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 196042662 | rs7512769 | T | A | rs7512769 | 20889312 | 2.00E-06 | NA | 1.29 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 196084492 | rs6696438 | C | T | rs6696438 | 19197363 | 5.86E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 196098354 | rs12136161 | A | T | rs12136161 | 20889312 | 7.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 196100216 | rs12087473 | A | G | rs12087473 | 20889312 | 7.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 196692672 | rs381974 | A | G | rs381974 | 24043878 | 1.35E-05 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs381974-A | Research Support, Non-U.S. Gov't | C | CFH |
| 1 | 199373716 | rs543505 | T | C | rs543505 | 20889312 | 1.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 199374488 | rs661480 | C | A | rs661480 | 20889312 | 1.26E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 199435387 | rs7542074 | A | C | rs7542074 | 20889312 | 6.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 199558644 | rs2786742 | T | A | rs2786742 | 20889312 | 5.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 200640792 | rs6656619 | T | C | rs6656619 | 20832056 | 4.71E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 1 | 200645938 | rs4387211 | A | T | rs4387211 | 20832056 | 4.23E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 1 | 200646073 | rs6700559 | C | T | rs6700559 | 20832056 | 3.58E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 1 | 201045473 | rs3820422 | A | G | rs3820422 | 21926974 | 3.34E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 202038945 | rs9427727 | T | C | rs9427727 | 19197363 | 9.77E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 202628576 | rs2153441 | T | C | rs2153441 | 20889312 | 7.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 202688077 | rs7529811 | A | G | rs7529811 | 20889312 | 6.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 202734579 | rs7519148 | A | G | rs7519148 | 20889312 | 5.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 203149154 | rs2071580 | C | T | rs2071580 | 21688384 | 6.50E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | CHI3L1 |
| 1 | 203361173 | rs6428009 | G | C | rs6428009 | pha002859 | 6.92E-05 | phs000021 | 1.49 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 1 | 204318983 | rs4951067 | C | T | rs4951067 | 20832056 | 3.43E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PLEKHA6 |
| 1 | 204318997 | rs4951068 | C | T | rs4951068 | 20832056 | 3.43E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PLEKHA6 |
| 1 | 204815612 | rs4951135 | T | C | rs4951135 | 19197363 | 8.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 205157759 | rs12042196 | C | T | rs12042196 | 19571811 | 8.36E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | DSTYK |
| 1 | 205755046 | rs12565968 | G | A | rs12565968 | 21688384 | 5.57E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 1 | 208067651 | rs2262269 | A | C | rs2262269 | 22479419 | 2.00E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | CD34 |
| 1 | 208350952 | rs4406633 | G | A | rs4406633 | 22479419 | 6.90E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PLXNA2 |
| 1 | 208368201 | rs11590686 | C | T | rs11590686 | 22479419 | 2.30E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PLXNA2 |
| 1 | 210241616 | rs170555 | T | C | rs170555 | 21674006 | 2.05E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SYT14 |
| 1 | 210536025 | rs7527939 | C | T | rs7527939 | 23142968 | 6.00E-09 | NA | 2.63 | [1.89-3.66] | 188 European ancestry cases; 376 European ancestry controls | European(564) | ALL(564) | EUR(564) | ALL(564) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7527939-C | NA | C | HHAT |
| 1 | 210848224 | rs10863850 | A | G | rs10863850 | 19850283 | 2.04E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 1 | 213278325 | rs11120089 | A | G | rs11120089 | 19197363 | 4.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 213503630 | rs11576637 | T | A,C,G | rs11576637 | 19197363 | 7.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 213887376 | rs6540801 | G | C | rs6540801 | 22648509 | 9.85E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 213893501 | rs6657203 | G | T | rs6657203 | 22648509 | 6.56E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 213914914 | rs11803653 | G | A | rs11803653 | 22648509 | 9.57E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 1 | 214239318 | rs11120251 | G | A | rs11120251 | 21688384 | 6.25E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 1 | 216712891 | rs6694260 | C | A | rs6694260 | 19197363 | 5.40E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 216819427 | rs12023399 | C | G | rs12023399 | 20832056 | 7.17E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ESRRG |
| 1 | 218348909 | rs10495096 | T | C | rs10495096 | 20832056 | 3.65E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 1 | 221884371 | rs11118832 | T | C | rs11118832 | 19197363 | 6.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 1 | 231912592 | rs16854954 | T | C | rs16854954 | 20185149 | 7.72E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 1 | 232007219 | rs9432024 | T | C | rs9432024 | 22440650 | 0.00000167 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | DISC1 |
| 1 | 232312344 | rs12754490 | T | C | rs12754490 | 20889312 | 6.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 236206080 | rs1570828 | A | G | rs1570828 | 20889312 | 3.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 236206443 | rs10803248 | T | C | rs10803248 | 20889312 | 3.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 236224569 | rs6702978 | A | G | rs6702978 | 20889312 | 7.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 236234626 | rs10754850 | C | A | rs10754850 | 20889312 | 1.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 236313127 | rs7520258 | T | C | rs7520258 | 21107309 | 5.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | GPR137B |
| 1 | 237258799 | rs16834810 | G | A | rs16834810 | 21688384 | 1.38E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | RYR2 |
| 1 | 237267334 | rs16834822 | G | T | rs16834822 | 21688384 | 2.10E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | RYR2 |
| 1 | 237267370 | rs16834824 | C | T | rs16834824 | 21688384 | 2.33E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | RYR2 |
| 1 | 238573691 | rs1021356 | A | G | rs1021356 | 22883433 | 4.93E-06 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 238574814 | rs6662339 | C | T | rs6662339 | 22883433 | 4.23E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 238575717 | rs6689284 | G | A | rs6689284 | 22883433 | 3.15E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 238575867 | rs6665978 | C | T | rs6665978 | 22883433 | 3.15E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 238576614 | rs12118091 | T | G | rs12118091 | 22883433 | 4.93E-06 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 240716710 | rs1320590 | A | G | rs1320590 | 20889312 | 5.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 241039187 | rs4660010 | G | A | rs4660010 | 19197363 | 6.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,G |
| 1 | 241096756 | rs261858 | T | C | rs261858 | 19197363 | 1.57E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 242016838 | rs4149868 | T | C | rs4149868 | 20889312 | 8.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 242603059 | rs2055536 | A | G | rs2055536 | 22883433 | 9.96E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 242603249 | rs2810030 | G | A | rs2810030 | 22883433 | 9.71E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 242765473 | rs7527225 | G | A | rs7527225 | 19197363 | 6.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 243041047 | rs4658504 | T | C | rs4658504 | 19197363 | 2.64E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 243049874 | rs10926906 | C | G | rs10926906 | 19571811 | 2.09E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 1 | 243449881 | rs3818802 | G | A | rs3818802 | 21926974 | 2.44E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 1 | 243544827 | rs1538774 | C | G | rs1538774 | 23974872 | 3.00E-08 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1538774-G | Research Support, N.I.H., Extramural |
| 1 | 243608967 | rs6703335 | A | G | rs6703335 | 21926974 | 5.00E-08 | NA | 1.09 | [1.06-1.13] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 1 | 243663893 | rs14403 | C | T | rs14403 | 23974872 | 2.00E-08 | NA | 1.1 | [1.07-1.13] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs14403-C | Research Support, N.I.H., Extramural |
| 1 | 244309299 | rs6695226 | A | G | rs6695226 | 19197363 | 5.07E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 1 | 244390564 | rs10429924 | C | T | rs10429924 | 22885689 | 1.00E-06 | EA | 1.61 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 1 | 245703990 | rs9919234 | G | T | rs9919234 | 23805179 | 3.77E-06 | NA | 310.6 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs9919234-G | JOURNAL ARTICLE |
| 1 | 245733608 | rs10924245 | G | T | rs10924245 | 23212062 | 7.00E-06 | Mood symptoms | 0.17 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 1 | 246090818 | rs2275312 | C | T | rs2275312 | 20889312 | 5.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 1 | 246091115 | rs2275313 | C | G | rs2275313 | 20889312 | 6.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 3067917 | rs7371570 | G | A | rs7371570 | 19197363 | 8.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 3339350 | rs2324582 | G | A | rs2324582 | 20832056 | 1.92E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TSSC1 |
| 2 | 3882177 | rs2034730 | A | G | rs2034730 | 20832056 | 2.77E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 2 | 4327339 | rs7586198 | T | C | rs7586198 | 19197363 | 2.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 4353141 | rs4585039 | C | A | rs4585039 | 19197363 | 2.20E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 5925857 | rs1560238 | C | T | rs1560238 | 22883433 | 1.74E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 5926156 | rs16864200 | C | T | rs16864200 | 22883433 | 1.69E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 5928093 | rs16864209 | T | C | rs16864209 | 22883433 | 1.69E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 5931302 | rs10495524 | G | A | rs10495524 | 19197363 | 8.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 5973504 | rs2709447 | A | C | rs2709447 | 19197363 | 3.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 7062123 | rs10495547 | G | A | rs10495547 | 20832056 | 4.12E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | RNF144A |
| 2 | 8278854 | rs12479058 | G | T | rs12479058 | 22037555 | 3.73E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | LINC00299 |
| 2 | 8287950 | rs7591430 | T | C | rs7591430 | 19571809 | 6.53E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 8287950 | rs7591430 | T | C | rs7591430 | pha002859 | 5.64E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | LINC00299 | intron | NR_034135 |
| 2 | 8980472 | rs13008971 | A | C | rs13008971 | 21926974 | 6.00E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 11199971 | rs2357889 | C | T | rs2357889 | 19197363 | 4.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 12568996 | rs10929808 | G | A | rs10929808 | 20889312 | 4.00E-06 | NA | 1.37 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 12828973 | rs625842 | A | C | rs625842 | 19197363 | 6.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 12833928 | rs501596 | A | G | rs501596 | 19197363 | 8.11E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 12976179 | rs4669887 | T | G | rs4669887 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 13080220 | rs983037 | A | C | rs983037 | 19197363 | 9.59E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 13102424 | rs999059 | T | C | rs999059 | 19197363 | 6.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 13168232 | rs1818595 | A | G | rs1818595 | 19197363 | 7.01E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 15867707 | rs2380671 | A | G | rs2380671 | 20889312 | 9.14E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 17303288 | rs10495658 | T | G | rs10495658 | 23637625 | 0.0000399 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 19473547 | rs17439558 | T | C | rs17439558 | 20889312 | 9.51E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 19524172 | rs6725667 | T | G | rs6725667 | 19850283 | 3.14E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 2 | 20696256 | rs342096 | G | T | rs342096 | 22440650 | 0.000314 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 2 | 21501219 | rs17397220 | C | A | rs17397220 | 20889312 | 5.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 21703101 | rs13392037 | C | T | rs13392037 | 20832056 | 6.42E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 2 | 21703314 | rs17042457 | C | G | rs17042457 | 20832056 | 6.42E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 2 | 21707203 | rs10490611 | A | G | rs10490611 | 20832056 | 6.42E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 22439514 | rs10193722 | A | C | rs10193722 | 24253340 | 9.73E-05 | NA | 1.27 | [1.13-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 22576085 | rs1509379 | A | C | rs1509379 | 19571809 | 6.75E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22576085 | rs1509379 | A | C | rs1509379 | 20889312 | 3.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 22576100 | rs1605834 | A | G | rs1605834 | 19571809 | 1.61E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22576100 | rs1605834 | A | G | rs1605834 | 20889312 | 8.00E-06 | NA | 1.32 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 22576100 | rs1605834 | A | G | rs1605834 | pha002857 | 5.11E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 2 | 22612275 | rs13424767 | T | C | rs13424767 | 19571809 | 1.02E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22612638 | rs1396725 | G | A | rs1396725 | 19571809 | 2.54E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22613819 | rs1509355 | C | T | rs1509355 | 19571809 | 2.72E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22615313 | rs13413863 | A | G | rs13413863 | 19571809 | 5.96E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22616209 | rs6741194 | G | T | rs6741194 | 19571809 | 1.73E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22616534 | rs1949038 | T | C | rs1949038 | 19571809 | 2.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22616777 | rs1509360 | G | A | rs1509360 | 19571809 | 1.80E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22618537 | rs6749647 | G | T | rs6749647 | 19571809 | 4.72E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22741939 | rs13006508 | A | G | rs13006508 | 19571809 | 3.57E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 22742356 | rs6735294 | T | C | rs6735294 | 19571809 | 7.12E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 24521766 | rs6707600 | C | T | rs6707600 | 21107309 | 3.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | ITSN2 |
| 2 | 26880402 | rs1275953 | C | T | rs1275953 | 20889312 | 7.50E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 26883482 | rs1275951 | C | T | rs1275951 | 20889312 | 6.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 26886068 | rs1275945 | C | T | rs1275945 | 20889312 | 4.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 26886523 | rs1731227 | G | A | rs1731227 | 20889312 | 7.96E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 26892931 | rs1275964 | G | A | rs1275964 | 20889312 | 3.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 27706640 | rs2272417 | T | C | rs2272417 | 21926974 | 7.05E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 27721971 | rs813592 | T | C | rs813592 | 23637625 | 0.0000271 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 27743423 | rs11681351 | G | A | rs11681351 | 22883433 | 7.70E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 27746832 | rs8179252 | A | C | rs8179252 | 22883433 | 7.70E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 27794233 | rs10205364 | C | T | rs10205364 | 22883433 | 9.12E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 27801403 | rs1919125 | C | G | rs1919125 | 22883433 | 9.30E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 27801418 | rs1919126 | C | A | rs1919126 | 22883433 | 9.02E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 27807624 | rs13026621 | G | A | rs13026621 | 22883433 | 9.02E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 27855239 | rs4666005 | A | G | rs4666005 | 22883433 | 6.83E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 27857517 | rs1528402 | G | A | rs1528402 | 22883433 | 2.98E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 29535061 | rs17007869 | G | A | rs17007869 | 22648509 | 9.04E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 2 | 29702682 | rs7426089 | A | G | rs7426089 | 19197363 | 2.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 29747174 | rs12467802 | C | T | rs12467802 | 23358160 | 6.54E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 29785781 | rs12473275 | G | A | rs12473275 | 23358160 | 9.24E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 31415077 | rs10192210 | G | A | rs10192210 | 19571809 | 5.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 31415077 | rs10192210 | G | A | rs10192210 | pha002859 | 3.52E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | CAPN14 | intron | NM_001145122 |
| 2 | 32407674 | rs17011863 | C | G | rs17011863 | 19571809 | 6.19E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 32881702 | rs17012044 | G | A | rs17012044 | 20832056 | 9.46E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TTC27 |
| 2 | 34103546 | rs773828 | A | C | rs773828 | 19197363 | 4.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 35614444 | rs17016558 | T | C | rs17016558 | 19197363 | 1.28E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 35624746 | rs6756157 | T | C | rs6756157 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 37410316 | rs11124565 | T | G | rs11124565 | 20832056 | 2.61E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SULT6B1 |
| 2 | 37412935 | rs11895771 | T | G | rs11895771 | 20832056 | 7.97E-06 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SULT6B1 |
| 2 | 37572687 | rs6708524 | G | A | rs6708524 | 20889312 | 9.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 37575287 | rs3821142 | C | T | rs3821142 | 20889312 | 9.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 37578208 | rs10179447 | G | A | rs10179447 | 20889312 | 9.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 37592628 | rs2373000 | C | T | rs2373000 | 23974872 | 7.00E-09 | NA | 1.09 | [1.06-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2373000-T | Research Support, N.I.H., Extramural |
| 2 | 37949251 | rs1476873 | A | G | rs1476873 | 19197363 | 6.98E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 40738497 | rs17026106 | T | C | rs17026106 | 20832056 | 2.01E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SLC8A1 |
| 2 | 40757454 | rs13017279 | C | T | rs13017279 | 20832056 | 1.17E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 2 | 40757655 | rs17026152 | G | A | rs17026152 | 20832056 | 1.30E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 40757791 | rs13017846 | A | G | rs13017846 | 20832056 | 2.60E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 40760283 | rs17026155 | C | T | rs17026155 | 20832056 | 1.50E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 2 | 40760965 | rs17026156 | T | C | rs17026156 | 20832056 | 1.65E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 2 | 40764015 | rs13010889 | C | A | rs13010889 | 20832056 | 8.75E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 44291333 | rs9284745 | C | T | rs9284745 | 19197363 | 7.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 2 | 44318652 | rs6726274 | A | G | rs6726274 | 20832056 | 1.43E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 44543125 | rs1946932 | C | G | rs1946932 | 20889312 | 8.76E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 44546016 | rs8410 | C | A,G,T | rs8410 | 20889312 | 8.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 44647038 | rs1584885 | G | T | rs1584885 | 20889312 | 2.07E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 44693424 | rs2166453 | C | T | rs2166453 | 20889312 | 5.76E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 45483869 | rs7595329 | T | C | rs7595329 | 22440650 | 0.000634 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 2 | 45982030 | rs867286 | G | A | rs867286 | 20889312 | 3.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 48047335 | rs4381823 | A | G | rs4381823 | 23894747 | 6.00E-06 | EA | 1.43 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 2 | 48098708 | rs12463595 | C | T | rs12463595 | 24253340 | 3.52E-05 | NA | 1.33 | [1.16-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 48131936 | rs13035558 | T | C | rs13035558 | 24253340 | 8.43E-05 | NA | 1.31 | [1.14-1.50] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 51002929 | rs3850333 | A | G | rs3850333 | 19571811 | 6.36E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NRXN1 |
| 2 | 51991896 | rs17862772 | A | G | rs17862772 | 20889312 | 1.03E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 53833291 | rs10490459 | G | C | rs10490459 | 21674006 | 7.10E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 2 | 53864413 | rs12618833 | C | T | rs12618833 | 24253340 | 2.96E-06 | NA | 1.55 | [1.28-1.88] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 53867187 | rs997644 | G | T | rs997644 | 24253340 | 2.49E-06 | NA | 1.56 | [1.29-1.88] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 53898032 | rs2287512 | T | C | rs2287512 | 24253340 | 4.90E-05 | NA | 1.38 | [1.17-1.62] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 54418017 | rs11893929 | C | T | rs11893929 | 24253340 | 2.25E-05 | NA | 1.33 | [1.16-1.52] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 54420617 | rs13417493 | G | A | rs13417493 | 24253340 | 3.18E-05 | NA | 1.32 | [1.16-1.51] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 54424601 | rs1399513 | A | C | rs1399513 | 24253340 | 9.09E-06 | NA | 1.34 | [1.17-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 54437400 | rs11886559 | G | T | rs11886559 | 24253340 | 2.34E-05 | NA | 1.34 | [1.17-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 54442697 | rs11894205 | C | T | rs11894205 | 24253340 | 5.17E-05 | NA | 1.32 | [1.15-1.51] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 54861825 | rs2941579 | T | C | rs2941579 | pha002857 | 4.11E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | SPTBN1 | intron | NM_003128 |
| 2 | 57041772 | rs1468958 | T | C | rs1468958 | pha002859 | 8.06E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 2 | 57987593 | rs11682175 | T | C | rs11682175 | 21926974 | 4.07E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 58137618 | rs2717001 | C | T | rs2717001 | 21747397 | 1.00E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 58153676 | rs10189138 | G | T | rs10189138 | 23637625 | 0.000142 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 58222928 | rs2312147 | T | C | rs2312147 | 19571808 | 3.00E-07 | NA | 1.09 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2312147-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 58222928 | rs2312147 | T | C | rs2312147 | 21791550 | 1.90E-09 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 2 | 58222928 | rs2312147 | T | C | rs2312147 | 23164818 | 0.00023 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 2 | 59470345 | rs10170742 | A | C | rs10170742 | 19197363 | 6.34E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 59858364 | rs13019632 | T | C | rs13019632 | 23358160 | 1.53E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 59888538 | rs17596277 | G | A | rs17596277 | 23358160 | 2.95E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 59911911 | rs17596662 | G | A,T | rs17596662 | 23358160 | 2.32E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 60663798 | rs8179712 | C | T | rs8179712 | 21747397 | 6.98E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 61095245 | rs842639 | G | A | rs842639 | 19197363 | 4.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 61119471 | rs842647 | G | A | rs842647 | 19197363 | 5.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 61295122 | rs1177279 | A | G | rs1177279 | 19197363 | 2.82E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 62720041 | rs10202106 | T | C | rs10202106 | 19571809 | 9.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 65290842 | rs2241161 | C | A | rs2241161 | 24253340 | 9.39E-05 | NA | 1.25 | [1.11-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 66081693 | rs10490587 | T | C | rs10490587 | 19197363 | 8.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 67880148 | rs12476951 | C | T | rs12476951 | 20889312 | 9.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67908846 | rs4671825 | T | C | rs4671825 | 20889312 | 8.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67908949 | rs4671826 | C | T | rs4671826 | 20889312 | 2.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67919554 | rs10165761 | T | C | rs10165761 | 20889312 | 1.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67919897 | rs1978657 | C | T | rs1978657 | 20889312 | 9.62E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67946328 | rs1367458 | C | T | rs1367458 | 20889312 | 8.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67950714 | rs737359 | C | T | rs737359 | 20889312 | 9.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 67957066 | rs12477687 | C | T | rs12477687 | 20889312 | 5.33E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 71058835 | rs741326 | A | G | rs741326 | 19571811 | 4.14E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 2 | 75102176 | rs1869340 | A | G | rs1869340 | 21926974 | 5.82E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 77850353 | rs4558608 | T | C | rs4558608 | 19571809 | 9.85E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 79291934 | rs364446 | C | T | rs364446 | 19197363 | 2.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 79357595 | rs7603333 | G | A,T | rs7603333 | 19197363 | 8.75E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 79364824 | rs879021 | C | A | rs879021 | 19197363 | 7.32E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 79417943 | rs10496214 | G | T | rs10496214 | 19197363 | 6.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 82235644 | rs4852655 | C | T | rs4852655 | 19197363 | 8.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 99082938 | rs17032120 | C | T | rs17032120 | 22648509 | 9.92E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 2 | 99611768 | rs13396584 | T | G | rs13396584 | 20832056 | 1.19E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 2 | 101668857 | rs2278729 | G | A | rs2278729 | 20038948 | 2.00E-05 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TBC1D8 |
| 2 | 102962346 | rs62152663 | C | G | rs62152663 | 22440650 | 0.00012 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | IL1RL1 |
| 2 | 104302099 | rs17343583 | A | G | rs17343583 | 19197363 | 5.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 110274179 | rs11692886 | C | T | rs11692886 | 23637625 | 0.000105 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 110290160 | rs9330321 | T | C | rs9330321 | 19197363 | 7.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 110302464 | rs11541143 | G | A | rs11541143 | 23358160 | 8.13E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 110336043 | rs4953788 | A | C | rs4953788 | 19197363 | 1.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 110343913 | rs892464 | G | T | rs892464 | 19197363 | 6.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 111771647 | rs1384795 | A | G | rs1384795 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 113442808 | rs6728935 | T | C | rs6728935 | 24253340 | 9.48E-05 | NA | 1.25 | [1.12-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 113529240 | rs11677416 | T | C | rs11677416 | 21107309 | 7.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 2 | 115524203 | rs11890570 | T | C | rs11890570 | 23358160 | 6.95E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 118448486 | rs1477450 | G | A | rs1477450 | 22037555 | 2.06E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 2 | 118575468 | rs6737733 | C | T | rs6737733 | 19197363 | 8.11E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 119536884 | rs1551133 | C | A | rs1551133 | 21747397 | 8.63E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 119665962 | rs1898705 | G | A | rs1898705 | 19197363 | 2.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 120128482 | rs956309 | C | T | rs956309 | 24043878 | 1.64E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs956309-T | Research Support, Non-U.S. Gov't | C | DBI |
| 2 | 121652747 | rs277536 | C | T | rs277536 | 19197363 | 3.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 2 | 124841261 | rs7571072 | G | A | rs7571072 | 23358160 | 3.28E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 124983056 | rs1170612 | T | C | rs1170612 | 22885689 | 6.00E-06 | EA | 1.4 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 124983056 | rs1170612 | T | C | rs1170612 | 22885689 | 9.00E-06 | All | 1.37 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 127587337 | rs10197495 | T | C | rs10197495 | 19571809 | 8.00E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 134000064 | rs6749561 | A | G | rs6749561 | 20889312 | 1.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134003754 | rs17800749 | C | T | rs17800749 | 20889312 | 1.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134005569 | rs10496702 | G | A | rs10496702 | 20889312 | 7.00E-07 | NA | 1.4 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134011993 | rs13430905 | C | T | rs13430905 | 20889312 | 1.42E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134012499 | rs13431418 | C | T | rs13431418 | 20889312 | 1.03E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134014961 | rs7600871 | C | T | rs7600871 | 20889312 | 8.79E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134017053 | rs10193871 | T | C | rs10193871 | 20889312 | 6.33E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134043215 | rs13399558 | T | A | rs13399558 | 20889312 | 4.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134044193 | rs13412008 | G | T | rs13412008 | 20889312 | 4.53E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134044781 | rs12469282 | A | T | rs12469282 | 20889312 | 2.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 134529661 | rs1446741 | G | T | rs1446741 | 19197363 | 2.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 136899859 | rs2176717 | C | T | rs2176717 | 19197363 | 5.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 137091269 | rs12614381 | A | C | rs12614381 | 19571811 | 1.48E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 2 | 140448156 | rs7574941 | T | C | rs7574941 | 20889312 | 4.55E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 140449566 | rs11897599 | A | G | rs11897599 | 20889312 | 4.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 141769764 | rs1525590 | G | A | rs1525590 | 19850283 | 4.12E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 2 | 142030590 | rs300397 | C | A | rs300397 | 20832056 | 1.02E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | LRP1B |
| 2 | 143757925 | rs352892 | C | A | rs352892 | 19571809 | 3.43E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 143757925 | rs352892 | C | A | rs352892 | pha002859 | 5.04E-05 | phs000021 | 1.31 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | KYNU | intron | NM_003937 |
| 2 | 143892794 | rs827219 | C | T | rs827219 | 19197363 | 7.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 144684875 | rs768145 | C | T | rs768145 | 21674006 | 6.67E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 2 | 144908230 | rs12463773 | T | A | rs12463773 | 22037555 | 3.41E-09 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | GTDC1 |
| 2 | 145141541 | rs12991836 | A | C | rs12991836 | 21791550 | 1.10E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 2 | 145141541 | rs12991836 | A | C | rs12991836 | 23974872 | 1.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12991836-C | Research Support, N.I.H., Extramural |
| 2 | 147587955 | rs4539741 | G | A | rs4539741 | 20889312 | 9.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 149865250 | rs6435387 | A | G | rs6435387 | 21926974 | 3.40E-04 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 149865250 | rs6435387 | A | G | rs6435387 | 23637625 | 0.0000428 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 149891845 | rs4667369 | G | C | rs4667369 | 19571811 | 3.05E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 2 | 150600709 | rs10490076 | T | G | rs10490076 | 20889312 | 2.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 150603989 | rs17745212 | C | T | rs17745212 | 20889312 | 3.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 150674955 | rs2068460 | T | G | rs2068460 | 20889312 | 9.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 151638802 | rs12475182 | C | T | rs12475182 | 21747397 | 2.56E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 152990721 | rs3768651 | T | A,C,G | rs3768651 | 19197363 | 1.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 152995177 | rs12621378 | C | T | rs12621378 | 19197363 | 1.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 152998552 | rs11893841 | G | A | rs11893841 | 19197363 | 1.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 153092375 | rs4664544 | C | T | rs4664544 | 24253340 | 3.96E-05 | NA | 1.54 | [1.25-1.89] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 153129366 | rs12988834 | G | A | rs12988834 | 24253340 | 5.72E-05 | NA | 1.52 | [1.23-1.89] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 153208493 | rs16830964 | A | C | rs16830964 | 24253340 | 1.13E-06 | NA | 1.64 | [1.35-2.04] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 153221287 | rs4664574 | G | T | rs4664574 | 24253340 | 1.39E-06 | NA | 1.64 | NA | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 153232345 | rs16831009 | A | G | rs16831009 | 24253340 | 2.44E-06 | NA | 1.61 | [1.32-1.96] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 153371873 | rs16831263 | T | G | rs16831263 | 20889312 | 4.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 154084952 | rs967496 | C | T | rs967496 | 21674006 | 6.04E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 2 | 154283374 | rs7567863 | T | C | rs7567863 | 19571811 | 9.00E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 2 | 155345145 | rs249693 | T | C | rs249693 | 20889312 | 1.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 155375036 | rs12328466 | G | A | rs12328466 | 20889312 | 9.67E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 156256701 | rs4544377 | G | A | rs4544377 | 19197363 | 8.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 165652687 | rs718573 | T | C | rs718573 | 23358160 | 9.76E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 166811765 | rs6731900 | A | G | rs6731900 | 20038948 | 4.00E-06 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TTC21B |
| 2 | 166873299 | rs565348 | A | C | rs565348 | 20038948 | 1.00E-05 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SCN1A |
| 2 | 166915335 | rs10930201 | C | A | rs10930201 | 20038948 | 3.00E-05 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SCN1A |
| 2 | 169176370 | rs16855271 | G | A | rs16855271 | 20889312 | 2.54E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 169176370 | rs16855271 | G | A | rs16855271 | pha002857 | 9.00E-06 | phs000021 | 1.71 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 2 | 169719500 | rs12993143 | T | G | rs12993143 | 21688384 | 8.71E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NOSTRIN |
| 2 | 169749841 | rs853770 | T | C | rs853770 | 19571809 | 3.45E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 171478402 | rs2160231 | C | A | rs2160231 | 19197363 | 3.63E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 174998583 | rs1595796 | A | G | rs1595796 | 19571808 | 6.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 175017714 | rs2119137 | A | G | rs2119137 | 19197363 | 1.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 179746322 | rs6716304 | G | A | rs6716304 | 19197363 | 8.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 181016133 | rs17180327 | A | G | rs17180327 | 21926974 | 6.80E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 181016133 | rs17180327 | A | G | rs17180327 | 23637625 | 0.0000129 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 182455994 | rs993648 | C | T | rs993648 | 18521091 | 3.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs993648-T | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 2 | 182884959 | rs1196185 | T | A | rs1196185 | 19571809 | 7.90E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 183696519 | rs17265803 | T | C | rs17265803 | 22440650 | 0.0000657 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 2 | 185778428 | rs1344706 | A | C | rs1344706 | 18677311 | 2.00E-07 | 1.12 | NA | 479 cases; 2,937 controls | NOPOP(3416) | ALL(3416) | NOPOP(3416) | ALL(3416) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1344706-T | Meta-Analysis | Research Support, Non-U.S. Gov't | T | |
| 2 | 185811940 | rs4380187 | A | C | rs4380187 | 23974872 | 6.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4380187-A | Research Support, N.I.H., Extramural |
| 2 | 190825226 | rs6745182 | T | C | rs6745182 | 21747397 | 8.74E-06 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 193984621 | rs17662626 | A | G | rs17662626 | 21926974 | 5.00E-08 | NA | 1.2 | [1.13-1.26] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs17662626-A | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 193984621 | rs17662626 | A | G | rs17662626 | 23637625 | 0.0000779 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 197315114 | rs6721157 | T | C | rs6721157 | 19197363 | 6.13E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 197318105 | rs1405886 | T | C | rs1405886 | 19197363 | 4.22E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 197522130 | rs6434875 | G | C | rs6434875 | 19850283 | 4.57E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 2 | 197926353 | rs4372926 | G | A | rs4372926 | 19197363 | 8.13E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 199994868 | rs1451487 | T | C | rs1451487 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 200125150 | rs1374360 | C | T | rs1374360 | 19197363 | 5.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 200715388 | rs2949006 | T | G | rs2949006 | 23974872 | 1.00E-08 | NA | 1.1 | [1.07-1.14] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2949006-T | Research Support, N.I.H., Extramural |
| 2 | 200863349 | rs4673634 | A | C | rs4673634 | 19197363 | 4.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 200868926 | rs7565480 | A | G | rs7565480 | 21674006 | 5.20E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 2 | 201003837 | rs1106399 | A | C | rs1106399 | 19197363 | 7.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 201004089 | rs1106400 | T | C | rs1106400 | 19197363 | 7.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 201344434 | rs733054 | A | G | rs733054 | 20832056 | 4.18E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SPATS2L |
| 2 | 202122995 | rs3769823 | A | G | rs3769823 | 22883433 | 4.88E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 202151163 | rs3769818 | A | G | rs3769818 | 22883433 | 3.34E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 202153225 | rs700635 | C | A | rs700635 | 22883433 | 3.34E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 202153684 | rs6714430 | C | T | rs6714430 | 22883433 | 3.34E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 207121782 | rs2058710 | A | G | rs2058710 | 22688191 | 9.00E-06 | NA | 1.24 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 207828958 | rs17639570 | C | G | rs17639570 | 21688384 | 3.49E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | CPO |
| 2 | 208236850 | rs7561038 | A | G | rs7561038 | 20889312 | 9.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 212470620 | rs1851196 | G | A | rs1851196 | 19571809 | 2.14E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 212470620 | rs1851196 | G | A | rs1851196 | pha002859 | 5.11E-06 | phs000021 | 1.35 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | ERBB4 | intron | NM_001042599 |
| 2 | 213189297 | rs16775 | G | A | rs16775 | 24253340 | 9.06E-05 | NA | 1.53 | [1.26-1.86] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 2 | 215243815 | rs4673821 | T | C | rs4673821 | 19850283 | 4.45E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 2 | 217463442 | rs7590938 | A | G | rs7590938 | 19571809 | 2.47E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 217638521 | rs4674113 | T | C | rs4674113 | 20832056 | 1.14E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 2 | 217908985 | rs4621152 | T | C | rs4621152 | 19571811 | 4.58E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 2 | 219252208 | rs3731863 | C | T | rs3731863 | 19197363 | 6.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 220981041 | rs3935261 | G | T | rs3935261 | pha002859 | 6.78E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 2 | 221847734 | rs7579067 | T | G | rs7579067 | 19197363 | 1.66E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 221862562 | rs897124 | C | T | rs897124 | 19197363 | 8.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 221928569 | rs10804294 | G | A | rs10804294 | 21795503 | 2.20E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | G |
| 2 | 221938126 | rs1991966 | T | C | rs1991966 | 21795503 | 8.49E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 2 | 222685565 | rs2161765 | A | G | rs2161765 | 21795503 | 4.23E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | G |
| 2 | 223852036 | rs10498146 | A | G | rs10498146 | 21795503 | 7.41E-10 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 2 | 224473767 | rs13402129 | T | G | rs13402129 | 19197363 | 4.01E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 2 | 225952702 | rs6741439 | A | G | rs6741439 | 20889312 | 3.53E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 226504486 | rs16866682 | A | C | rs16866682 | 19571809 | 7.00E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 226510293 | rs12694674 | G | C | rs12694674 | 19571809 | 8.10E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 229723961 | rs4487082 | A | G | rs4487082 | 19197363 | 5.70E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 229741332 | rs10490037 | T | C | rs10490037 | 20889312 | 2.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 229742593 | rs12472073 | T | C | rs12472073 | 20889312 | 6.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 229743009 | rs7578485 | G | A | rs7578485 | 20889312 | 7.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 229766101 | rs7571792 | C | T | rs7571792 | 20889312 | 4.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 229969798 | rs6436839 | A | G | rs6436839 | 21107309 | 3.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | PID1 |
| 2 | 231045943 | rs4973285 | G | C | rs4973285 | 20832056 | 8.05E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SP110 |
| 2 | 231047303 | rs10804364 | G | A | rs10804364 | 20832056 | 3.54E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SP110 |
| 2 | 231047645 | rs10755048 | T | C | rs10755048 | 20832056 | 4.88E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SP110 |
| 2 | 231053318 | rs6752361 | A | G | rs6752361 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SP110 |
| 2 | 231058869 | rs1896259 | C | A | rs1896259 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SP110 |
| 2 | 231060003 | rs4973298 | A | G | rs4973298 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SP110 |
| 2 | 231064928 | rs41345344 | G | C | rs41345344 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SP110 |
| 2 | 231065083 | rs41423848 | C | A | rs41423848 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SP110 |
| 2 | 232796610 | rs749052 | T | C | rs749052 | 20889312 | 5.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 232797861 | rs2679178 | C | T | rs2679178 | 20889312 | 5.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 232946290 | rs3100584 | C | T | rs3100584 | 20889312 | 8.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 232955363 | rs3116158 | G | A | rs3116158 | 20889312 | 6.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 233533202 | rs7578760 | C | T | rs7578760 | 21795503 | 1.03E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | T,C |
| 2 | 233736244 | rs2675968 | C | T | rs2675968 | 21926974 | 2.58E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 233736244 | rs2675968 | C | T | rs2675968 | 23637625 | 0.0000564 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 233743109 | rs778371 | A | G | rs778371 | 23974872 | 2.00E-08 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs778371-G | Research Support, N.I.H., Extramural |
| 2 | 234597087 | rs10168416 | C | G | rs10168416 | 22440650 | 0.00058 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | UGT1A10 |
| 2 | 234601965 | rs1105880 | A | G | rs1105880 | 22440650 | 0.000261 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | UGT1A6 |
| 2 | 234602191 | rs2070959 | A | G | rs2070959 | 22440650 | 0.00058 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | UGT1A6 |
| 2 | 234602202 | rs1105879 | A | C | rs1105879 | 22440650 | 0.000212 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | UGT1A6 |
| 2 | 234705389 | rs741160 | A | G | rs741160 | 21795503 | 3.42E-08 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | T |
| 2 | 234927260 | rs11901004 | G | T | rs11901004 | 23805179 | 4.89E-06 | NA | 436.6 | [NA] unit decrease | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs11901004-T | JOURNAL ARTICLE |
| 2 | 234929686 | rs17866592 | T | C | rs17866592 | 23805179 | 2.31E-06 | NA | 446.7 | [NA] unit decrease | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs17866592-C | JOURNAL ARTICLE |
| 2 | 234964316 | rs7603271 | C | A | rs7603271 | 20889312 | 6.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 234966165 | rs11563194 | T | C | rs11563194 | 20889312 | 7.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 235639080 | rs7586477 | T | C | rs7586477 | 21795503 | 1.77E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 2 | 235775041 | rs1529413 | A | G | rs1529413 | 21795503 | 1.60E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 2 | 236780457 | rs3820776 | A | G | rs3820776 | 19571809 | 8.48E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 236795343 | rs13025591 | A | C | rs13025591 | 19571809 | 4.59E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 236795343 | rs13025591 | A | C | rs13025591 | 21926974 | 6.00E-06 | NA | 1.07 | [1.04-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 236795343 | rs13025591 | A | C | rs13025591 | 22688191 | 8.00E-08 | NA | 1.11 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 2 | 236796548 | rs4663627 | C | T | rs4663627 | 23637625 | 0.000131 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 2 | 236822569 | rs1962550 | C | G | rs1962550 | 19571809 | 1.15E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 238522744 | rs4278886 | C | T | rs4278886 | 21795503 | 3.34E-07 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 2 | 238541938 | rs6715815 | T | C | rs6715815 | 21795503 | 4.04E-08 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 2 | 238546572 | rs12052937 | C | T | rs12052937 | 21795503 | 1.22E-11 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | T |
| 2 | 238564791 | rs13408642 | G | A | rs13408642 | 21795503 | 4.29E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 2 | 238569285 | rs6725315 | T | C | rs6725315 | 21795503 | 2.83E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | T |
| 2 | 239416791 | rs2878083 | C | A | rs2878083 | 19571809 | 4.67E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 2 | 239416791 | rs2878083 | C | A | rs2878083 | pha002859 | 4.21E-05 | phs000021 | 1.43 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 2 | 239655737 | rs12692245 | G | A | rs12692245 | 20889312 | 6.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 239733773 | rs9751357 | A | G | rs9751357 | 21795503 | 2.08E-09 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 2 | 240741278 | rs1996511 | T | C | rs1996511 | 19850283 | 4.66E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 2 | 241293064 | rs1320123 | G | T | rs1320123 | 20889312 | 8.50E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 2 | 241308505 | rs1574192 | G | A | rs1574192 | 19023125 | 4.00E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 2701863 | rs6442743 | G | T | rs6442743 | 19197363 | 1.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 2716743 | rs2600274 | G | A | rs2600274 | 19197363 | 8.22E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 2725060 | rs2675307 | T | C | rs2675307 | 19197363 | 6.45E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 2731319 | rs7646667 | C | T | rs7646667 | 19197363 | 2.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 2902945 | rs17021457 | T | C | rs17021457 | 20889312 | 2.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 3280819 | rs3843388 | A | C | rs3843388 | 19197363 | 7.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 3965910 | rs10510280 | G | C | rs10510280 | 20889312 | 3.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 4565559 | rs7639802 | C | T | rs7639802 | 20185149 | 2.05E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 3 | 4567628 | rs11708874 | T | G | rs11708874 | 20185149 | 1.27E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 3 | 4777544 | rs931389 | T | C | rs931389 | 19197363 | 5.23E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 4969763 | rs12497445 | C | T | rs12497445 | 22037555 | 4.59E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 3 | 5534360 | rs1991578 | C | G | rs1991578 | 20889312 | 7.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 5731142 | rs11713590 | G | A | rs11713590 | 20889312 | 3.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 6770752 | rs345233 | T | C | rs345233 | 19197363 | 4.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 7125901 | rs6785425 | A | G | rs6785425 | 19197363 | 6.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 8410210 | rs358989 | G | A,T | rs358989 | 19571811 | 6.57E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | LOC100288428 |
| 3 | 9939828 | rs12053867 | G | A | rs12053867 | 20832056 | 2.86E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 10413601 | rs2289273 | G | A | rs2289273 | 19850283 | 1.60E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 3 | 11062934 | rs2950798 | G | A | rs2950798 | 19197363 | 6.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 11092828 | rs11128537 | C | T | rs11128537 | 21747397 | 7.21E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 11655381 | rs2574704 | T | C | rs2574704 | 19197363 | 7.22E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 13117999 | rs444944 | G | A | rs444944 | pha002857 | 1.30E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 3 | 13423110 | rs6771144 | G | A | rs6771144 | 23358160 | 4.69E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 13642946 | rs1878173 | A | G | rs1878173 | 19197363 | 3.63E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 13646818 | rs3773271 | T | C | rs3773271 | 19197363 | 2.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 13676094 | rs3773250 | C | T | rs3773250 | 20889312 | 9.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 13899147 | rs7653849 | A | G | rs7653849 | 20185149 | 3.40E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 3 | 14290893 | rs1871856 | A | G | rs1871856 | 19197363 | 4.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 14377925 | rs900176 | A | G | rs900176 | 19571809 | 7.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 16840813 | rs1449531 | C | T | rs1449531 | 21674006 | 2.39E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 17812688 | rs11921152 | C | A | rs11921152 | 20185149 | 3.99E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 3 | 20108546 | rs1124376 | C | T | rs1124376 | 20889312 | 5.00E-06 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20140837 | rs9819628 | C | T | rs9819628 | 20889312 | 1.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20154059 | rs12488369 | A | C | rs12488369 | 20889312 | 1.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20512768 | rs1523347 | A | C | rs1523347 | 20889312 | 9.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20515745 | rs599845 | G | A | rs599845 | 20889312 | 6.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20518701 | rs1520043 | T | G | rs1520043 | 22440650 | 0.0000149 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 3 | 20615273 | rs1395103 | G | A | rs1395103 | 20889312 | 9.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 20707404 | rs9841080 | T | G | rs9841080 | 20889312 | 8.93E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 21383764 | rs7650051 | A | G | rs7650051 | 19571809 | 9.91E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 22428845 | rs4858402 | T | G | rs4858402 | 20832056 | 2.39E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 22597882 | rs6775609 | T | A | rs6775609 | 21674006 | 5.98E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 25017218 | rs6779328 | T | C | rs6779328 | 19571811 | 2.92E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 3 | 25064898 | rs10865802 | C | G | rs10865802 | 19571809 | 6.73E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 25064898 | rs10865802 | C | G | rs10865802 | pha002859 | 1.32E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 3 | 25092767 | rs9310769 | T | A | rs9310769 | 20889312 | 7.78E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 25112171 | rs993804 | C | T | rs993804 | 20889312 | 1.00E-06 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 25112171 | rs993804 | C | T | rs993804 | pha002857 | 4.39E-05 | phs000021 | 1.02 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 3 | 25398175 | rs12631631 | G | A | rs12631631 | 20889312 | 5.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 25406510 | rs1016787 | T | C | rs1016787 | 20889312 | 9.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 28936109 | rs9816337 | G | T | rs9816337 | 19197363 | 6.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 28936836 | rs9817531 | G | A | rs9817531 | 19197363 | 7.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 29373424 | rs6804900 | A | G | rs6804900 | 20889312 | 3.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 30271646 | rs7644703 | T | C | rs7644703 | 19571811 | 9.24E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 3 | 32322975 | rs6783478 | A | T | rs6783478 | 21688384 | 3.61E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | CMTM8 |
| 3 | 32704743 | rs6550146 | A | G | rs6550146 | 20832056 | 2.63E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 32706557 | rs6790023 | G | C | rs6790023 | 20832056 | 3.40E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 3 | 32883189 | rs7610310 | G | A | rs7610310 | 22037555 | 2.52E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TRIM71 |
| 3 | 32883581 | rs997520 | G | A | rs997520 | 22037555 | 2.74E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TRIM71 |
| 3 | 33991181 | rs9881576 | T | A | rs9881576 | 20889312 | 3.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 36842623 | rs13072940 | T | A | rs13072940 | 23637625 | 0.0000127 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 36856030 | rs9834970 | T | C | rs9834970 | 24280982 | 1.00E-10 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 3 | 36856030 | rs9834970 | T | C | rs9834970 | 24280982 | 4.00E-07 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 3 | 36856030 | rs9834970 | T | C | rs9834970 | 24280982 | 7.18E-05 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 3 | 36856328 | rs906482 | G | A | rs906482 | 19197363 | 8.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 36862980 | rs4624519 | C | T | rs4624519 | 21926974 | 2.00E-07 | NA | 1.09 | [1.05-1.12] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 36864489 | rs6550435 | T | G | rs6550435 | 23974872 | 6.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6550435-G | Research Support, N.I.H., Extramural |
| 3 | 40168322 | rs2679824 | G | C | rs2679824 | 22037555 | 1.21E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | MYRIP |
| 3 | 40188011 | rs1799428 | C | T | rs1799428 | 22037555 | 5.38E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | MYRIP |
| 3 | 41037669 | rs4130762 | C | T | rs4130762 | 19197363 | 3.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 42448471 | rs2286720 | G | A | rs2286720 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | LYZL4 |
| 3 | 42578579 | rs14380 | A | T | rs14380 | 20889312 | 1.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 42728144 | rs6805421 | A | G | rs6805421 | 19850283 | 2.94E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 3 | 42800778 | rs339676 | G | A | rs339676 | 19571809 | 6.67E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 42800778 | rs339676 | G | A | rs339676 | pha002859 | 5.84E-05 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C,T | CCDC13 | intron | NM_144719 |
| 3 | 43230723 | rs17075286 | C | G | rs17075286 | 21057379 | 8.00E-07 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 45125566 | rs4682765 | C | T | rs4682765 | 22440650 | 0.00013 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | CDCP1 |
| 3 | 45528134 | rs4683118 | T | A | rs4683118 | 20889312 | 7.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 51389570 | rs12487468 | A | G | rs12487468 | 19571808 | 3.90E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 51393046 | rs4974096 | G | A | rs4974096 | 19571808 | 2.30E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 51411797 | rs3828395 | T | C | rs3828395 | 19571808 | 7.40E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 51418135 | rs2241785 | C | T | rs2241785 | 19571808 | 3.40E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 51430657 | rs3804766 | A | C | rs3804766 | 19571808 | 2.40E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 51655856 | rs4687592 | C | T | rs4687592 | 19571808 | 6.30E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 52838402 | rs4687552 | T | C | rs4687552 | 23974872 | 1.00E-08 | NA | 1.09 | [1.06-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4687552-T | Research Support, N.I.H., Extramural |
| 3 | 52852538 | rs4687657 | G | T | rs4687657 | 23637625 | 0.000156 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 52855229 | rs2239547 | T | C | rs2239547 | 21926974 | 6.00E-08 | NA | 1.1 | [1.06-1.14] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 54632547 | rs13064588 | T | A | rs13064588 | 20889312 | 4.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 55571760 | rs1795648 | G | A | rs1795648 | 21057379 | 6.00E-06 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 56487580 | rs1878270 | C | G | rs1878270 | 21688384 | 7.11E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | ERC2 |
| 3 | 56489776 | rs9873381 | G | A | rs9873381 | 21688384 | 2.51E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | ERC2 |
| 3 | 56516645 | rs9881216 | C | T | rs9881216 | 21688384 | 6.38E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 3 | 59519764 | rs9855650 | C | T | rs9855650 | 19197363 | 7.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,T |
| 3 | 60007657 | rs3912494 | C | G,T | rs3912494 | 19571809 | 7.44E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 60007657 | rs3912494 | C | G,T | rs3912494 | pha002859 | 9.80E-05 | phs000021 | 1.31 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | FHIT | intron | NM_002012 |
| 3 | 60025505 | rs17257269 | T | C | rs17257269 | 20889312 | 1.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 60028556 | rs3856662 | A | G | rs3856662 | 20889312 | 4.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 60062654 | rs17062101 | A | G | rs17062101 | 20889312 | 5.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 60536669 | rs241684 | C | G | rs241684 | 20889312 | 8.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 60545429 | rs2856045 | A | G | rs2856045 | 20889312 | 6.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 62051711 | rs349171 | T | C | rs349171 | 19571811 | 9.58E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | PTPRG |
| 3 | 62064769 | rs11130874 | A | G | rs11130874 | 21926974 | 2.00E-06 | NA | 1.1 | [1.06-1.14] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 62064769 | rs11130874 | A | G | rs11130874 | 23637625 | 0.00000945 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 62733212 | rs3843397 | T | C | rs3843397 | 19197363 | 7.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 63947128 | rs6801346 | G | A | rs6801346 | 20889312 | 2.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 63970192 | rs10510903 | C | G | rs10510903 | 20889312 | 5.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 64104388 | rs1096170 | C | T | rs1096170 | 24253340 | 2.53E-05 | NA | 1.29 | [1.15-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 64111719 | rs696009 | T | C | rs696009 | 24253340 | 7.21E-05 | NA | 1.28 | [1.14-1.44] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 64111897 | rs696010 | G | A | rs696010 | 24253340 | 6.16E-05 | NA | 1.28 | [1.14-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 64617070 | rs6445420 | C | T | rs6445420 | 22883433 | 9.67E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 65745435 | rs264096 | G | A | rs264096 | 19197363 | 5.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 67145427 | rs4417811 | T | C | rs4417811 | pha002857 | 1.52E-05 | phs000021 | 1.5 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 3 | 70146574 | rs4855460 | G | T | rs4855460 | 19197363 | 4.57E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 71174475 | rs2121783 | C | T | rs2121783 | 23358160 | 8.86E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 72275215 | rs13327342 | G | T | rs13327342 | 19571809 | 6.21E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 72275215 | rs13327342 | G | T | rs13327342 | pha002859 | 3.68E-05 | phs000021 | 1.39 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 3 | 72278900 | rs13074688 | G | A | rs13074688 | 19571809 | 6.37E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 72278900 | rs13074688 | G | A | rs13074688 | pha002859 | 3.73E-05 | phs000021 | 1.39 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 3 | 72533244 | rs6775777 | T | C | rs6775777 | 20889312 | 6.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 77525616 | rs34557441 | A | C | rs34557441 | 20889312 | 8.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 77989402 | rs7618756 | T | C | rs7618756 | 19023125 | 4.58E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 78044689 | rs9836484 | G | A | rs9836484 | 19023125 | 4.00E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 78055947 | rs7610746 | C | T | rs7610746 | 19023125 | 7.56E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 78276135 | rs7433616 | T | G | rs7433616 | 20889312 | 2.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 78803784 | rs1865863 | G | A | rs1865863 | 21674006 | 1.61E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ROBO1 |
| 3 | 80914409 | rs12487279 | C | G | rs12487279 | 20889312 | 5.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 84871763 | rs1248845 | T | A | rs1248845 | 19571809 | 9.26E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 84930747 | rs1248821 | T | C | rs1248821 | 19571809 | 5.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 88306596 | rs6551304 | A | G | rs6551304 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 88336413 | rs2061372 | G | A | rs2061372 | 19197363 | 6.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 88455499 | rs1463473 | G | A | rs1463473 | 23358160 | 5.91E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 94030669 | rs10511147 | A | C | rs10511147 | 19197363 | 7.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 99020533 | rs4417903 | T | C | rs4417903 | 21674006 | 8.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 100801643 | rs13096071 | T | A,C,G | rs13096071 | 21926974 | 5.40E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 101058775 | rs5009801 | A | G | rs5009801 | 20832056 | 5.92E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101068620 | rs2553419 | C | T | rs2553419 | 20832056 | 5.92E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SENP7 |
| 3 | 101069852 | rs9877228 | G | C | rs9877228 | 20832056 | 8.87E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SENP7 |
| 3 | 101072258 | rs9875156 | A | C | rs9875156 | 20832056 | 4.92E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101109166 | rs9857723 | A | T | rs9857723 | 20832056 | 4.65E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SENP7 |
| 3 | 101113177 | rs1520653 | C | T | rs1520653 | 20832056 | 7.03E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SENP7 |
| 3 | 101114990 | rs12497154 | G | A | rs12497154 | 20832056 | 4.10E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101122120 | rs2317750 | C | A | rs2317750 | 20832056 | 5.92E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101136340 | rs9822356 | C | T | rs9822356 | 20832056 | 7.54E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SENP7 |
| 3 | 101165959 | rs10936631 | A | G | rs10936631 | 20832056 | 2.49E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101177644 | rs12496159 | A | C | rs12496159 | 20832056 | 4.85E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SENP7 |
| 3 | 101181890 | rs2317703 | T | C | rs2317703 | 20832056 | 5.92E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SENP7 |
| 3 | 101211487 | rs3846087 | A | G | rs3846087 | 20832056 | 1.38E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SENP7 |
| 3 | 101230304 | rs2317704 | C | G | rs2317704 | 20832056 | 4.26E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SENP7 |
| 3 | 101697208 | rs1514471 | A | G | rs1514471 | 19197363 | 8.94E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 101909291 | rs13075312 | C | A | rs13075312 | 19197363 | 3.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 104106742 | rs17435554 | C | T | rs17435554 | 24253340 | 5.50E-05 | NA | 1.83 | [1.35-2.49] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 105877465 | rs6809315 | C | T | rs6809315 | 19571809 | 7.58E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 105902476 | rs1871274 | G | A | rs1871274 | 19571809 | 1.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 105952383 | rs6414233 | T | G | rs6414233 | 19571809 | 2.02E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 107115317 | rs7610766 | C | T | rs7610766 | pha002859 | 7.23E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 3 | 107225146 | rs1820527 | G | A | rs1820527 | 21674006 | 5.68E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 107225678 | rs10513196 | G | A | rs10513196 | 21674006 | 6.87E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 107233097 | rs10511260 | T | G | rs10511260 | 21674006 | 6.33E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 107640533 | rs13086279 | G | A | rs13086279 | 22883433 | 9.29E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 109466019 | rs1164067 | G | A | rs1164067 | 19571811 | 4.57E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 3 | 109555870 | rs1881949 | G | A | rs1881949 | 19197363 | 8.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 109829416 | rs7642520 | T | C | rs7642520 | 20889312 | 3.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 112219753 | rs2633580 | C | G | rs2633580 | pha002857 | 3.66E-05 | phs000021 | 1.5 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 3 | 112220781 | rs2633578 | A | G | rs2633578 | pha002857 | 3.53E-05 | phs000021 | 1.5 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 3 | 112291878 | rs766968 | T | C | rs766968 | pha002857 | 2.64E-05 | phs000021 | 1.51 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | SLC35A5 | intron | NM_017945 |
| 3 | 114362764 | rs9841504 | C | G | rs9841504 | 22037555 | 2.33E-08 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ZBTB20 |
| 3 | 117285470 | rs16827196 | C | A | rs16827196 | 20889312 | 8.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 117290322 | rs16827220 | A | G | rs16827220 | 20889312 | 6.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 118425484 | rs10934459 | T | C | rs10934459 | 19197363 | 2.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 119084331 | rs17203055 | A | G | rs17203055 | 23894747 | 5.00E-06 | EA | 1.43 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 3 | 123287806 | rs1965290 | T | C | rs1965290 | 20889312 | 4.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 123979651 | rs9880957 | A | G | rs9880957 | 20832056 | 3.34E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | KALRN |
| 3 | 123985016 | rs7636024 | G | T | rs7636024 | 20832056 | 5.18E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | KALRN |
| 3 | 125997198 | rs4679115 | C | T | rs4679115 | 24253340 | 8.07E-05 | NA | 1.25 | [1.11-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 126033522 | rs9851868 | G | A | rs9851868 | 19571809 | 8.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 126033522 | rs9851868 | G | A | rs9851868 | pha002859 | 2.63E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 3 | 128038373 | rs10934853 | C | A | rs10934853 | 19197363 | 5.23E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 128095652 | rs3021461 | T | C | rs3021461 | 19197363 | 3.18E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 128097496 | rs2293947 | A | C | rs2293947 | 19197363 | 5.45E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 128122820 | rs1735537 | T | C | rs1735537 | 19197363 | 2.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 131460188 | rs6806286 | T | C | rs6806286 | 19197363 | 7.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 131629716 | rs957919 | C | T | rs957919 | 19197363 | 8.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 131755360 | rs1919986 | C | T | rs1919986 | 20832056 | 1.27E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 134589067 | rs938382 | C | T | rs938382 | 20832056 | 5.10E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | EPHB1 |
| 3 | 134604237 | rs7639843 | C | T | rs7639843 | 20832056 | 2.60E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | EPHB1 |
| 3 | 135635468 | rs9877722 | G | C | rs9877722 | 19571809 | 5.84E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 135663482 | rs9819440 | C | T | rs9819440 | 19571809 | 9.06E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 139091219 | rs9859864 | G | T | rs9859864 | 21688384 | 6.13E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | COPB2 |
| 3 | 139132203 | rs1580642 | T | G | rs1580642 | 21688384 | 8.87E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | LOC100507291 |
| 3 | 139175797 | rs6439860 | T | C | rs6439860 | 21688384 | 7.46E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | RBP2 |
| 3 | 139177585 | rs6771831 | G | A | rs6771831 | 21688384 | 6.10E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | RBP2 |
| 3 | 139196961 | rs4683464 | C | T | rs4683464 | 21688384 | 6.21E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 3 | 139213903 | rs295470 | A | G | rs295470 | 21688384 | 7.75E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 3 | 139231782 | rs295484 | T | C | rs295484 | 21688384 | 6.93E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 3 | 139234066 | rs188421 | A | C | rs188421 | 21688384 | 6.03E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 3 | 139237008 | rs167187 | G | A | rs167187 | 21688384 | 6.21E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | RBP1 |
| 3 | 139585439 | rs16849528 | G | A | rs16849528 | 19197363 | 7.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 140053766 | rs1006877 | G | A | rs1006877 | 23358160 | 4.77E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 140084268 | rs1026773 | G | T | rs1026773 | 23358160 | 9.52E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 140086027 | rs6770610 | A | G | rs6770610 | 23358160 | 5.45E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 140086874 | rs11719890 | T | C | rs11719890 | 23358160 | 6.78E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 140088610 | rs1026778 | T | C | rs1026778 | 23358160 | 3.98E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 140090936 | rs1383016 | G | A | rs1383016 | 23358160 | 6.18E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 142547417 | rs9681405 | C | T | rs9681405 | 20889312 | 4.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 144264442 | rs2575185 | C | T | rs2575185 | 20889312 | 7.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 147927668 | rs7645488 | C | T | rs7645488 | 21674006 | 3.93E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 149871159 | rs2867840 | G | A | rs2867840 | 19197363 | 8.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 151207768 | rs4680474 | T | C | rs4680474 | 20832056 | 4.35E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 151208119 | rs6768085 | T | C | rs6768085 | 20832056 | 3.64E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 151763701 | rs1351267 | C | T | rs1351267 | 23212062 | 7.00E-06 | Mood symptoms | 0.09 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 3 | 152473776 | rs1381094 | C | T | rs1381094 | 22037552 | 1.78E-15 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 153430095 | rs2863756 | G | C | rs2863756 | 22648509 | 7.01E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 3 | 153544403 | rs9810882 | C | T | rs9810882 | 19571809 | 9.66E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 153769557 | rs1949634 | G | T | rs1949634 | 20889312 | 4.96E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 156009925 | rs1551066 | C | T | rs1551066 | 23358160 | 4.36E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 161423967 | rs2063836 | A | G | rs2063836 | 21791550 | 4.50E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 3 | 162085820 | rs12488754 | T | C | rs12488754 | 19197363 | 1.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 168299193 | rs10936559 | A | C | rs10936559 | 19197363 | 8.01E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 168309257 | rs7647208 | C | T | rs7647208 | 19197363 | 7.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 170163474 | rs6444931 | G | A | rs6444931 | 20889312 | 6.00E-07 | NA | 1.34 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 170163474 | rs6444931 | G | A | rs6444931 | pha002857 | 1.96E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 3 | 170166091 | rs6764438 | G | A | rs6764438 | 20889312 | 6.02E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 170166274 | rs6789806 | C | T | rs6789806 | 20889312 | 5.75E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 170452081 | rs575242 | G | A | rs575242 | 19197363 | 5.64E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 170457337 | rs564598 | A | C | rs564598 | 19197363 | 5.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 170462589 | rs474588 | A | C | rs474588 | 19197363 | 3.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 170465372 | rs517315 | G | A | rs517315 | 19197363 | 3.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 170950924 | rs1875446 | A | C | rs1875446 | 19197363 | 3.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 170971291 | rs2088885 | C | A | rs2088885 | 19023125 | 6.00E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 170979975 | rs7627954 | T | C | rs7627954 | 19023125 | 6.24E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 170995335 | rs13065441 | C | T | rs13065441 | 19571809 | 1.94E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 170995335 | rs13065441 | C | T | rs13065441 | pha002859 | 3.16E-05 | phs000021 | 1.61 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | TNIK | intron | NM_015028 |
| 3 | 171011079 | rs7615681 | T | C | rs7615681 | 19023125 | 2.15E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 171455188 | rs6794454 | T | C | rs6794454 | 20889312 | 7.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 173716814 | rs13078193 | A | G | rs13078193 | 21791550 | 2.20E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 3 | 175077686 | rs4894485 | T | C | rs4894485 | 19197363 | 1.29E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 175802031 | rs9869872 | A | G | rs9869872 | 23358160 | 4.78E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 175806373 | rs9875122 | C | T | rs9875122 | 23358160 | 7.26E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 175806735 | rs9820268 | T | C | rs9820268 | 23358160 | 6.86E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 175808125 | rs9847632 | A | G | rs9847632 | 23358160 | 9.33E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 175850699 | rs6788471 | C | T | rs6788471 | 23358160 | 2.11E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 176730199 | rs6792256 | G | A | rs6792256 | 20185149 | 8.87E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 3 | 176778098 | rs6768711 | G | A | rs6768711 | 20185149 | 3.63E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 3 | 178341582 | rs2054399 | G | A | rs2054399 | 22688191 | 1.00E-06 | NA | 1.22 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 180524764 | rs7640601 | G | C | rs7640601 | 22479419 | 7.30E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 3 | 180531941 | rs9869882 | A | G | rs9869882 | 22479419 | 3.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180533251 | rs9838229 | C | A | rs9838229 | 22479419 | 2.10E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180533251 | rs9838229 | C | A | rs9838229 | 23637625 | 0.0000289 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 180535405 | rs4488266 | C | T | rs4488266 | 22479419 | 3.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 3 | 180536365 | rs2139551 | A | G | rs2139551 | 22479419 | 1.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 3 | 180539392 | rs10937048 | A | G | rs10937048 | 22479419 | 3.90E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180550702 | rs6782299 | G | T | rs6782299 | 19571811 | 1.00E-07 | NA | 1.1 | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6782299-T | NA | T | NA |
| 3 | 180550702 | rs6782299 | G | T | rs6782299 | 22479419 | 1.40E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 180551214 | rs1879248 | C | T | rs1879248 | 21926974 | 7.00E-06 | NA | 1.07 | [1.04-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 180551214 | rs1879248 | C | T | rs1879248 | 22479419 | 1.50E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180556904 | rs1915104 | C | A | rs1915104 | 22479419 | 1.50E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 180566221 | rs6767560 | G | T | rs6767560 | 22479419 | 4.00E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 3 | 180576673 | rs2337743 | T | A | rs2337743 | 22479419 | 1.60E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180584718 | rs1607678 | C | T | rs1607678 | 22479419 | 1.70E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 3 | 180636744 | rs1011927 | A | G | rs1011927 | 19571809 | 1.88E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 180647263 | rs1805572 | T | C | rs1805572 | 19571809 | 5.03E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 180691092 | rs1010471 | G | A | rs1010471 | 21791550 | 3.20E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 3 | 180691092 | rs1010471 | G | A | rs1010471 | 22479419 | 6.50E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | FXR1 |
| 3 | 180772241 | rs1805610 | C | T | rs1805610 | 19571809 | 5.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 180778763 | rs1806190 | T | C | rs1806190 | 19571809 | 6.06E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 181205593 | rs12485391 | C | A | rs12485391 | 21926974 | 5.74E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 182861174 | rs7639990 | G | T | rs7639990 | 21926974 | 2.99E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 183517999 | rs263044 | A | G | rs263044 | 19197363 | 5.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 183527618 | rs263025 | T | C | rs263025 | 19197363 | 6.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 3 | 184573555 | rs6443999 | C | T | rs6443999 | 19850283 | 1.17E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 3 | 186054149 | rs1981783 | A | G | rs1981783 | 19197363 | 4.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 3 | 186063184 | rs12233555 | T | G | rs12233555 | 19197363 | 6.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 186530484 | rs266717 | T | C | rs266717 | 19197363 | 5.10E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 3 | 186959042 | rs3815623 | G | A | rs3815623 | 19197363 | 3.33E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 3 | 187694767 | rs13095186 | T | A | rs13095186 | 19571809 | 3.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 3 | 188488333 | rs10513829 | A | G | rs10513829 | 21674006 | 8.94E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | LPP |
| 3 | 189997396 | rs16865258 | C | T | rs16865258 | 21107309 | 2.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 3 | 191196592 | rs16822582 | A | G | rs16822582 | 20889312 | 8.00E-06 | NA | 1.5 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 3 | 193913088 | rs4441603 | C | T | rs4441603 | 19571811 | 3.92E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 4 | 2395297 | rs959770 | A | G | rs959770 | 23212062 | 9.00E-06 | Positive symptoms | 0.12 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 4 | 4460925 | rs11729131 | G | T | rs11729131 | 20889312 | 7.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 4499020 | rs6853914 | A | G | rs6853914 | 20889312 | 1.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 4678907 | rs7675915 | A | G | rs7675915 | 22440650 | 0.0000595 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | LOC100507266 |
| 4 | 5057311 | rs10009026 | G | A | rs10009026 | 20889312 | 4.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 5116247 | rs12509816 | A | G | rs12509816 | 20185149 | 3.34E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 4 | 6417785 | rs16838780 | T | C | rs16838780 | 22440650 | 0.000199 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | PPP2R2C |
| 4 | 7195054 | rs4689630 | G | A | rs4689630 | 22440650 | 0.0000979 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | SORCS2 |
| 4 | 7546373 | rs10470723 | C | T | rs10470723 | 20889312 | 5.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 9930962 | rs881971 | T | A,C,G | rs881971 | 21688384 | 6.30E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | SLC2A9 |
| 4 | 9942577 | rs4697698 | T | C | rs4697698 | 21688384 | 3.56E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SLC2A9 |
| 4 | 9945296 | rs4235346 | C | T | rs4235346 | 21688384 | 1.75E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9951120 | rs13328050 | G | T | rs13328050 | 21688384 | 7.19E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | SLC2A9 |
| 4 | 9953297 | rs4455410 | T | C | rs4455410 | 21688384 | 6.19E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9954758 | rs7375587 | A | T | rs7375587 | 21688384 | 6.36E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9954918 | rs7375599 | A | G | rs7375599 | 21688384 | 2.74E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | SLC2A9 |
| 4 | 9955198 | rs7378340 | C | T | rs7378340 | 21688384 | 6.36E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9955971 | rs4311316 | C | A | rs4311316 | 21688384 | 4.89E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | SLC2A9 |
| 4 | 9956096 | rs4314284 | C | T | rs4314284 | 21688384 | 6.36E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9965633 | rs6840802 | C | G | rs6840802 | 21688384 | 8.55E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SLC2A9 |
| 4 | 9965998 | rs6449171 | T | C | rs6449171 | 21688384 | 7.49E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9966422 | rs6449174 | C | T | rs6449174 | 21688384 | 8.66E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SLC2A9 |
| 4 | 9966593 | rs7658170 | T | C | rs7658170 | 21688384 | 6.51E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 9985710 | rs17246501 | A | C | rs17246501 | 21688384 | 7.75E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | SLC2A9 |
| 4 | 10004743 | rs17247314 | C | G | rs17247314 | 21688384 | 9.09E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SLC2A9 |
| 4 | 10018153 | rs6827754 | C | A | rs6827754 | 21688384 | 7.38E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | SLC2A9 |
| 4 | 10025163 | rs3775940 | T | A | rs3775940 | 21688384 | 4.94E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SLC2A9 |
| 4 | 10034933 | rs13146686 | T | C | rs13146686 | 21688384 | 4.81E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SLC2A9 |
| 4 | 10051672 | rs6829727 | A | C | rs6829727 | 21688384 | 4.84E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 4 | 10053155 | rs13120348 | C | G | rs13120348 | 21688384 | 2.85E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10096020 | rs11727087 | C | T | rs11727087 | 21688384 | 6.69E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | WDR1 |
| 4 | 10124239 | rs4697924 | T | C | rs4697924 | 21688384 | 4.35E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 4 | 10124567 | rs4697926 | A | C | rs4697926 | 21688384 | 2.06E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G,A | NA |
| 4 | 10124819 | rs4444830 | T | C | rs4444830 | 21688384 | 5.24E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 10126139 | rs11722989 | A | G | rs11722989 | 21688384 | 1.59E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10139157 | rs17198197 | G | A | rs17198197 | 21688384 | 8.18E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10144459 | rs4292329 | C | G | rs4292329 | 21688384 | 1.28E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 10153233 | rs737601 | C | T | rs737601 | 19197363 | 6.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 10271136 | rs12505222 | G | T | rs12505222 | 21688384 | 6.32E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10272788 | rs10489073 | G | A | rs10489073 | 21688384 | 4.21E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C,T | NA |
| 4 | 10273043 | rs17407324 | C | A | rs17407324 | 21688384 | 8.88E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 10273549 | rs10489071 | G | A | rs10489071 | 21688384 | 2.52E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 10274626 | rs4697998 | G | T | rs4697998 | 21688384 | 6.28E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10274934 | rs4697999 | G | C | rs4697999 | 21688384 | 7.77E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C,G | NA |
| 4 | 10274994 | rs17407555 | A | G | rs17407555 | 21688384 | 4.56E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 4 | 10275982 | rs6833142 | A | G | rs6833142 | 21688384 | 6.61E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10277467 | rs4698000 | T | C | rs4698000 | 21688384 | 4.04E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 10278552 | rs7435841 | G | A | rs7435841 | 21688384 | 8.91E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 10324160 | rs9291683 | G | A | rs9291683 | 21688384 | 2.47E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 4 | 11770896 | rs4552479 | C | T | rs4552479 | 21926974 | 6.00E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 12171491 | rs7670873 | T | C | rs7670873 | 19850283 | 2.87E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 4 | 13916351 | rs7676721 | G | T | rs7676721 | 19197363 | 6.76E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 13920982 | rs505703 | C | T | rs505703 | 19197363 | 4.18E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 13937260 | rs10516269 | T | G | rs10516269 | 19197363 | 7.25E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 14171487 | rs3111810 | T | C | rs3111810 | 22037552 | 3.19E-07 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 4 | 17082907 | rs4698167 | C | T | rs4698167 | 22440650 | 0.000409 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 4 | 17503839 | rs3796809 | G | A | rs3796809 | 20832056 | 4.35E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | QDPR |
| 4 | 19983104 | rs4626202 | T | C | rs4626202 | 19850283 | 1.65E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 4 | 20690057 | rs16869851 | A | C | rs16869851 | 19571809 | 5.17E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 20690057 | rs16869851 | A | C | rs16869851 | 20889312 | 5.14E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 24652142 | rs10939004 | C | T | rs10939004 | 22440650 | 0.000813 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 4 | 24694435 | rs11935819 | T | C | rs11935819 | 20889312 | 7.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 24698303 | rs4697472 | G | C | rs4697472 | 20889312 | 2.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 24700151 | rs2875373 | A | T | rs2875373 | 20889312 | 7.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 24705742 | rs12500507 | G | A | rs12500507 | 20889312 | 1.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 24711351 | rs6812181 | A | T | rs6812181 | 20889312 | 8.44E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 26441499 | rs4586917 | C | T | rs4586917 | 19571811 | 2.77E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 4 | 27894017 | rs995703 | G | A | rs995703 | 19571808 | 4.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 28676594 | rs9999712 | G | A | rs9999712 | 19197363 | 4.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 30169493 | rs7691359 | T | G | rs7691359 | 19571811 | 2.56E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 4 | 30827805 | rs4619848 | C | T | rs4619848 | 21747397 | 1.89E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 36089558 | rs6812542 | T | C | rs6812542 | 19197363 | 1.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 37827799 | rs1030349 | T | G | rs1030349 | 19197363 | 3.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 37838237 | rs2608307 | C | T | rs2608307 | 19197363 | 4.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 37909658 | rs16994065 | A | G | rs16994065 | 21688384 | 2.47E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | TBC1D1 |
| 4 | 40355126 | rs4264869 | C | T | rs4264869 | 19571808 | 6.50E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 41372602 | rs1377347 | T | G | rs1377347 | 19197363 | 2.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 4 | 41926368 | rs16853762 | G | C | rs16853762 | 19571811 | 8.52E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 4 | 47057759 | rs10015366 | A | G | rs10015366 | 19197363 | 4.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 47544481 | rs13139804 | A | G | rs13139804 | 22440650 | 0.000499 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | ATP10D |
| 4 | 53298518 | rs6554516 | C | T | rs6554516 | 19197363 | 4.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 55198205 | rs11729535 | G | A | rs11729535 | 19571809 | 3.49E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 55251828 | rs17691182 | T | C | rs17691182 | 24253340 | 6.99E-05 | NA | 1.27 | [1.13-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 57305202 | rs1356787 | T | C | rs1356787 | 19850283 | 4.26E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 4 | 57825140 | rs781668 | T | C | rs781668 | 21674006 | 1.18E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 4 | 58080251 | rs6850123 | C | T | rs6850123 | 22883433 | 7.49E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 58081590 | rs1860623 | A | G | rs1860623 | 22883433 | 8.60E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 58192851 | rs10488920 | G | A | rs10488920 | 21688384 | 8.86E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 4 | 59031089 | rs892307 | T | C | rs892307 | 23358160 | 3.12E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 61981727 | rs10517525 | G | A | rs10517525 | 21674006 | 1.99E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 4 | 61982096 | rs10517524 | A | G | rs10517524 | 21674006 | 8.22E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 4 | 62167906 | rs2880363 | A | G | rs2880363 | 19197363 | 4.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 62437318 | rs6856328 | C | G | rs6856328 | 21107309 | 8.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | LPHN3 |
| 4 | 65272890 | rs4860601 | G | C | rs4860601 | 20185149 | 4.35E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 4 | 65392633 | rs11735072 | A | C | rs11735072 | 19197363 | 3.33E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 68089365 | rs4280783 | C | T | rs4280783 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 68095870 | rs4639131 | T | C | rs4639131 | 19197363 | 8.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 72077830 | rs2579309 | G | A | rs2579309 | 21791550 | 2.50E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 4 | 77916705 | rs6836567 | A | C | rs6836567 | 18282107 | 3.93E-04 | NA | NA | NA | 660 cases; 2,271 controls | NOPOP(2931) | ALL(2931) | NOPOP(2931) | ALL(2931) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Comparative Study | A |
| 4 | 82763010 | rs6535281 | C | T | rs6535281 | 20889312 | 6.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 82783136 | rs1824657 | C | T | rs1824657 | 20889312 | 2.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 85277790 | rs6817184 | A | G | rs6817184 | 19197363 | 5.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 85294388 | rs1442173 | C | T | rs1442173 | 19197363 | 8.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 85932343 | rs6531783 | C | T | rs6531783 | 19850283 | 4.41E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 4 | 86088554 | rs4280720 | A | G | rs4280720 | 19197363 | 6.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 86098946 | rs12507778 | C | A | rs12507778 | 19197363 | 6.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 86153942 | rs6818991 | A | G | rs6818991 | 19197363 | 1.55E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 86157765 | rs2869282 | A | G | rs2869282 | 19197363 | 4.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 86437529 | rs4693701 | A | G | rs4693701 | 20832056 | 4.04E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | ARHGAP24 |
| 4 | 86927197 | rs2164537 | G | A | rs2164537 | 20185149 | 7.27E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 4 | 87219895 | rs1460751 | A | G | rs1460751 | 19850283 | 1.18E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 4 | 89287709 | rs12651141 | G | A | rs12651141 | 19197363 | 4.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 89576581 | rs2282593 | C | T | rs2282593 | 19197363 | 3.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 89588067 | rs10516817 | G | A | rs10516817 | 19197363 | 2.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 91496746 | rs7697633 | A | T | rs7697633 | pha002859 | 9.31E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | FAM190A | intron | NM_001145065 |
| 4 | 91720598 | rs2123959 | G | A | rs2123959 | 19571809 | 1.99E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 91732329 | rs7698270 | G | A | rs7698270 | 19850283 | 1.87E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 4 | 94840017 | rs2618735 | T | C | rs2618735 | 20889312 | 1.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95047893 | rs17021364 | T | C | rs17021364 | 19571809 | 9.55E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 95047893 | rs17021364 | T | C | rs17021364 | 20889312 | 8.17E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95146135 | rs11097407 | G | C | rs11097407 | 20889312 | 4.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95146135 | rs11097407 | G | C | rs11097407 | pha002857 | 2.46E-05 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | SMARCAD1 | intron | NM_001128429 |
| 4 | 95146281 | rs2664871 | C | T | rs2664871 | 20889312 | 2.06E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95146281 | rs2664871 | C | T | rs2664871 | pha002857 | 2.59E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | SMARCAD1 | intron | NM_001128429 |
| 4 | 95147055 | rs2632401 | C | G | rs2632401 | 20889312 | 1.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95147055 | rs2632401 | C | G | rs2632401 | pha002857 | 1.74E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | SMARCAD1 | intron | NM_001128429 |
| 4 | 95162960 | rs2087170 | T | G | rs2087170 | 20889312 | 3.03E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95162960 | rs2087170 | T | G | rs2087170 | pha002857 | 3.46E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | SMARCAD1 | intron | NM_001128429 |
| 4 | 95183216 | rs12646184 | C | T | rs12646184 | 20889312 | 1.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95183216 | rs12646184 | C | T | rs12646184 | pha002857 | 1.96E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | SMARCAD1 | intron | NM_001128429 |
| 4 | 95238536 | rs10030713 | G | C | rs10030713 | 20889312 | 7.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95255278 | rs2059606 | G | A | rs2059606 | 20889312 | 7.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 95255278 | rs2059606 | G | A | rs2059606 | pha002857 | 5.15E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | HPGDS | intron | NM_014485 |
| 4 | 96171211 | rs3775003 | T | C | rs3775003 | 19850283 | 2.20E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 4 | 96406950 | rs4505826 | A | G | rs4505826 | 19197363 | 8.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 97723779 | rs2204919 | T | C | rs2204919 | pha002859 | 7.80E-05 | phs000021 | 1.31 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 4 | 97769620 | rs4446314 | T | G | rs4446314 | 19197363 | 8.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 99926965 | rs2123782 | T | C | rs2123782 | 19197363 | 8.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 4 | 101306586 | rs1982086 | T | C | rs1982086 | 19197363 | 8.79E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 101306906 | rs13122464 | G | A | rs13122464 | 19197363 | 4.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 101307674 | rs10516462 | A | G | rs10516462 | 19197363 | 8.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 102679337 | rs871061 | A | C | rs871061 | 19571811 | 2.52E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 4 | 102835645 | rs4295265 | C | T | rs4295265 | 21926974 | 2.90E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 103457418 | rs230529 | T | C | rs230529 | 22479419 | 2.00E-07 | NA | 1.45 | [1.26-1.66] | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs230529-T | Research Support, Non-U.S. Gov't | A | NFKB1 |
| 4 | 103503824 | rs4699030 | G | C | rs4699030 | 22479419 | 1.75E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NFKB1 |
| 4 | 106294522 | rs2713831 | T | G | rs2713831 | 19571808 | 6.60E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 106912921 | rs4698952 | A | G | rs4698952 | 19850283 | 1.48E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 4 | 109295912 | rs17038960 | G | A | rs17038960 | 19571809 | 9.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 109295912 | rs17038960 | G | A | rs17038960 | pha002859 | 3.00E-05 | phs000021 | 1.64 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 4 | 109880730 | rs17039583 | A | G | rs17039583 | 21688384 | 1.56E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | COL25A1 |
| 4 | 109882400 | rs9307326 | G | A | rs9307326 | 21688384 | 5.49E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | COL25A1 |
| 4 | 109901424 | rs1405154 | G | A | rs1405154 | 21688384 | 7.49E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | COL25A1 |
| 4 | 111060898 | rs1979469 | A | G | rs1979469 | 19571809 | 9.60E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 113989326 | rs582050 | T | C | rs582050 | 20889312 | 1.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 114666848 | rs10488963 | G | C | rs10488963 | 21674006 | 4.65E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | CAMK2D |
| 4 | 118516983 | rs2130238 | T | C | rs2130238 | 24253340 | 9.95E-05 | NA | 1.33 | [1.15-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118646907 | rs11098403 | A | G | rs11098403 | 24253340 | 3.00E-08 | NA | 1.15 | [1.08-1.21] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs11098403-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118646907 | rs11098403 | A | G | rs11098403 | 24253340 | 6.55E-09 | NA | 1.41 | [1.26-1.59] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118650042 | rs11562926 | T | C | rs11562926 | 24253340 | 1.95E-08 | NA | 1.4 | [1.24-1.57] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118663416 | rs7678262 | A | G | rs7678262 | 24253340 | 6.41E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118664503 | rs9307440 | G | A | rs9307440 | 24253340 | 8.68E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118667234 | rs11945758 | G | T | rs11945758 | 24253340 | 8.44E-08 | NA | 1.38 | [1.23-1.55] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 118667520 | rs11562835 | G | A | rs11562835 | 20889312 | 9.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 118689954 | rs1350618 | G | A | rs1350618 | 24253340 | 6.40E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118705004 | rs4585377 | T | C | rs4585377 | 24253340 | 7.85E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118707424 | rs2125709 | G | A | rs2125709 | 24253340 | 1.28E-07 | NA | 1.36 | [1.21-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 4 | 118722033 | rs4377657 | C | T | rs4377657 | 24253340 | 4.32E-08 | NA | 1.38 | [1.23-1.55] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 118731430 | rs994619 | C | T | rs994619 | 24253340 | 8.06E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118736834 | rs6819399 | G | T | rs6819399 | 24253340 | 1.84E-07 | NA | 1.36 | [1.21-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 118741585 | rs6852960 | C | T | rs6852960 | 24253340 | 9.45E-08 | NA | 1.37 | [1.22-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118752073 | rs4429786 | T | C | rs4429786 | 24253340 | 1.35E-07 | NA | 1.36 | [1.22-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118758795 | rs4597906 | C | T | rs4597906 | 24253340 | 5.62E-07 | NA | 1.33 | [1.19-1.49] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 118766190 | rs4580717 | T | C | rs4580717 | 20889312 | 6.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 118777687 | rs4580714 | G | A | rs4580714 | 24253340 | 1.31E-06 | NA | 1.33 | [1.19-1.50] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 118784946 | rs12503813 | C | T | rs12503813 | 24253340 | 5.82E-06 | NA | 1.32 | [1.16-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 118789858 | rs7675389 | T | C | rs7675389 | 24253340 | 5.92E-06 | NA | 1.31 | [1.17-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 118802784 | rs4131119 | G | A | rs4131119 | 24253340 | 4.71E-07 | NA | 1.35 | [1.20-1.51] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 118803489 | rs6534063 | A | G | rs6534063 | 24253340 | 3.60E-07 | NA | 1.36 | [1.21-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 122445005 | rs7673847 | T | C | rs7673847 | 22883433 | 6.21E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 125705944 | rs2174623 | G | C | rs2174623 | 21674006 | 6.11E-06 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 4 | 125707440 | rs10518451 | G | A | rs10518451 | 21674006 | 2.08E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 4 | 125727324 | rs963916 | A | G | rs963916 | 21674006 | 9.62E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 4 | 125728477 | rs10518443 | G | A | rs10518443 | 21674006 | 6.65E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 4 | 125804337 | rs1395327 | T | C | rs1395327 | 21674006 | 1.99E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 4 | 125804523 | rs1395325 | A | G | rs1395325 | 21674006 | 7.50E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 4 | 131438987 | rs2926412 | C | T | rs2926412 | 19197363 | 8.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 132957347 | rs2163542 | T | A | rs2163542 | 19571809 | 9.51E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 132970713 | rs10015186 | G | A | rs10015186 | 19571809 | 4.35E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 132972290 | rs1991700 | T | C | rs1991700 | 19571809 | 9.51E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 132980813 | rs1431686 | C | T | rs1431686 | 19571809 | 5.34E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 132989468 | rs13115673 | G | T | rs13115673 | 19571809 | 8.83E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 133486856 | rs1991976 | G | T | rs1991976 | 19571811 | 2.74E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 4 | 133519291 | rs11732021 | A | G | rs11732021 | 19197363 | 7.15E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 4 | 138037282 | rs10155413 | T | C | rs10155413 | 21926974 | 1.20E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 138764286 | rs6823023 | T | C | rs6823023 | 19197363 | 5.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 139192424 | rs7657480 | A | G | rs7657480 | 19197363 | 8.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 140783603 | rs11100314 | A | G | rs11100314 | 20832056 | 2.06E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | MAML3 |
| 4 | 140785463 | rs6825389 | T | C | rs6825389 | 20832056 | 1.50E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | MAML3 |
| 4 | 140786845 | rs795982 | A | C | rs795982 | 19197363 | 1.02E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 140793731 | rs4863698 | G | C | rs4863698 | 20832056 | 9.21E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | MAML3 |
| 4 | 145196206 | rs7690204 | A | T | rs7690204 | 20889312 | 2.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 148550590 | rs10519911 | T | C | rs10519911 | 21674006 | 4.02E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | TMEM184C |
| 4 | 149265104 | rs17024633 | C | T | rs17024633 | 20889312 | 7.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 152193825 | rs2407220 | C | T | rs2407220 | 22648509 | 9.27E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 4 | 152203897 | rs6850311 | C | T | rs6850311 | 22648509 | 8.52E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 4 | 153660407 | rs10009955 | C | A | rs10009955 | 22440650 | 0.0000686 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 4 | 154550725 | rs2083290 | C | A | rs2083290 | 20889312 | 9.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 155947430 | rs7436102 | A | G | rs7436102 | 24253340 | 2.08E-05 | NA | 1.46 | [1.22-1.74] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 155969710 | rs17032390 | T | C | rs17032390 | 24253340 | 4.75E-05 | NA | 1.45 | [1.22-1.73] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 156986004 | rs4605601 | G | A | rs4605601 | 19197363 | 3.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 161224554 | rs12374311 | A | G | rs12374311 | 21926974 | 4.86E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 162843802 | rs4586881 | T | C | rs4586881 | 19850283 | 3.55E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 4 | 163957430 | rs6850650 | C | T | rs6850650 | 20889312 | 1.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 165423835 | rs325586 | T | C | rs325586 | 19571809 | 9.74E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 168256989 | rs11132983 | C | A | rs11132983 | 24253340 | 1.48E-05 | NA | 1.79 | [1.39-2.33] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 168294976 | rs17053218 | A | G | rs17053218 | 24253340 | 8.49E-05 | NA | 2.13 | [1.49-3.13] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 169168329 | rs1378223 | A | G | rs1378223 | 24253340 | 3.96E-05 | NA | 2.03 | [1.46-2.82] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 169530258 | rs17054392 | T | C | rs17054392 | 18521091 | 3.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs17054392-C | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 4 | 170237660 | rs10017932 | G | A | rs10017932 | 19571811 | 6.69E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 4 | 175002343 | rs17060160 | A | G | rs17060160 | 22648509 | 8.33E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 4 | 175008790 | rs4695907 | G | A | rs4695907 | 22648509 | 8.16E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 4 | 175008954 | rs4695908 | A | T | rs4695908 | 22648509 | 8.89E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 4 | 177438117 | rs448261 | G | A | rs448261 | 19571809 | 4.64E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177438265 | rs374816 | T | G | rs374816 | 19571809 | 5.00E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177438636 | rs410203 | C | T | rs410203 | 19571809 | 7.13E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177439074 | rs395003 | A | G | rs395003 | 19571809 | 6.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177439156 | rs443233 | T | C | rs443233 | 19571809 | 3.74E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177444335 | rs425571 | A | G | rs425571 | 19571809 | 1.20E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177469451 | rs13137758 | A | G | rs13137758 | 19571809 | 7.23E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 177469582 | rs13148526 | T | C | rs13148526 | 19571809 | 3.19E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 180655625 | rs17746001 | C | T | rs17746001 | 22688191 | 3.00E-07 | NA | 1.75 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 182638513 | rs6848193 | A | G | rs6848193 | 19571808 | 7.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 183137398 | rs2726807 | T | C | rs2726807 | 22885689 | 6.00E-06 | EA | 1.29 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 183792885 | rs17074159 | T | C | rs17074159 | 20889312 | 7.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 184943274 | rs3749531 | T | C,G | rs3749531 | 20889312 | 7.91E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 186610123 | rs13150700 | T | C | rs13150700 | 23637625 | 0.000277 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 4 | 187719659 | rs7698529 | G | A | rs7698529 | 22883433 | 7.95E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 4 | 187722479 | rs11132409 | C | T | rs11132409 | 22883433 | 9.89E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 4 | 188171689 | rs6553048 | G | A | rs6553048 | 20889312 | 2.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 4 | 188805939 | rs4632716 | G | C | rs4632716 | 19571809 | 7.62E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 4 | 188805939 | rs4632716 | G | C | rs4632716 | pha002859 | 7.25E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 4 | 189730989 | rs2377467 | T | G | rs2377467 | 20185149 | 4.10E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 4 | 190477915 | rs3885379 | C | T | rs3885379 | 21674006 | 2.56E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 1992286 | rs10038119 | A | G | rs10038119 | 20832056 | 2.97E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 1992423 | rs13153232 | G | A | rs13153232 | 20832056 | 1.79E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 1996039 | rs2101404 | C | T | rs2101404 | 20832056 | 4.32E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 5 | 2186956 | rs4866652 | A | G | rs4866652 | 19197363 | 8.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 2876127 | rs16870615 | C | T | rs16870615 | 19197363 | 5.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 4121368 | rs17664513 | G | A | rs17664513 | 19571809 | 9.10E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 4198117 | rs6555259 | A | G | rs6555259 | 24253340 | 3.35E-05 | NA | 2.05 | [1.46-2.89] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 4198436 | rs6555261 | T | C | rs6555261 | 24253340 | 3.54E-05 | NA | 2.05 | [1.46-2.88] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 4703625 | rs10067738 | T | C | rs10067738 | 20889312 | 2.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 4720585 | rs7727102 | G | C | rs7727102 | 20889312 | 1.00E-06 | NA | 1.31 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 5876623 | rs950651 | T | C | rs950651 | 21674006 | 1.39E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 6384283 | rs4701726 | T | G | rs4701726 | 20185149 | 7.05E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 5 | 6705857 | rs100841 | G | A | rs100841 | 19197363 | 2.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 6834441 | rs924127 | A | C | rs924127 | 19571811 | 8.68E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 5 | 7053506 | rs6859571 | C | T | rs6859571 | 19197363 | 8.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 7099381 | rs1390626 | G | T | rs1390626 | 19197363 | 7.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 7361980 | rs6891243 | A | T | rs6891243 | 20889312 | 3.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 10675766 | rs1531842 | G | T | rs1531842 | 19197363 | 8.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 10811474 | rs17176973 | C | G | rs17176973 | 19571809 | 2.16E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 10811474 | rs17176973 | C | G | rs17176973 | 20889312 | 5.00E-06 | NA | 1.78 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 10811474 | rs17176973 | C | G | rs17176973 | pha002857 | 2.27E-05 | phs000021 | 1.91 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 5 | 11218488 | rs27520 | C | T | rs27520 | 20889312 | 8.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 11298223 | rs2530215 | T | C | rs2530215 | 20889312 | 7.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 11811571 | rs4466166 | T | C | rs4466166 | 21791550 | 3.90E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 5 | 13221613 | rs1373950 | A | G | rs1373950 | 19197363 | 4.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 13505522 | rs112897 | G | A | rs112897 | 20889312 | 6.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 13581311 | rs233379 | C | A | rs233379 | 21926974 | 9.77E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 13701536 | rs3734110 | T | C | rs3734110 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 13703843 | rs10513149 | C | T | rs10513149 | 19197363 | 6.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 13719089 | rs30168 | G | A,C,T | rs30168 | 19197363 | 2.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 13719997 | rs39829 | A | C | rs39829 | 19197363 | 1.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 13728151 | rs10513151 | T | C | rs10513151 | 19197363 | 3.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 16848200 | rs10213765 | C | T | rs10213765 | 20832056 | 1.09E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | MYO10 |
| 5 | 17279638 | rs11133896 | A | T | rs11133896 | 19850283 | 4.51E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 5 | 17761225 | rs11959046 | G | A | rs11959046 | 22883433 | 8.16E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 19093749 | rs4327600 | T | C | rs4327600 | 22648509 | 6.69E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 5 | 19448847 | rs17280924 | C | T | rs17280924 | 22648509 | 1.60E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 5 | 21617664 | rs9292991 | G | C | rs9292991 | 19571809 | 1.80E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 21617664 | rs9292991 | G | C | rs9292991 | pha002857 | 2.23E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 5 | 21919536 | rs7730479 | C | T | rs7730479 | 21926974 | 4.26E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 26028389 | rs4404644 | T | C | rs4404644 | 19197363 | 2.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 27773935 | rs4254923 | A | G | rs4254923 | 19571809 | 9.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 27792192 | rs4516860 | T | C | rs4516860 | 20889312 | 9.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 27987104 | rs4537065 | G | A | rs4537065 | 19197363 | 7.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 28025934 | rs7710236 | C | T | rs7710236 | 19197363 | 2.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 29794387 | rs4597986 | A | G | rs4597986 | 21926974 | 4.25E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 32770750 | rs11740452 | G | A | rs11740452 | 21688384 | 6.65E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NPR3 |
| 5 | 34053621 | rs7379110 | T | C | rs7379110 | 19197363 | 2.80E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 35369453 | rs413206 | C | T | rs413206 | 19197363 | 8.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 37556926 | rs2088077 | A | G | rs2088077 | 22440650 | 0.000609 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | WDR70 |
| 5 | 38210894 | rs4869576 | T | C | rs4869576 | 22037555 | 1.52E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 38417839 | rs10512684 | A | G | rs10512684 | 21674006 | 7.94E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | EGFLAM |
| 5 | 39175369 | rs10045011 | C | T | rs10045011 | 24253340 | 7.18E-05 | NA | 1.69 | [1.30-2.22] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 39418421 | rs6872083 | A | G | rs6872083 | 24253340 | 5.74E-05 | NA | 1.3 | [1.14-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 40626753 | rs11955175 | T | C | rs11955175 | 20889312 | 6.00E-06 | NA | 1.47 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 40646560 | rs7716982 | G | T | rs7716982 | 22037555 | 8.38E-09 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 5 | 40647763 | rs6882769 | C | T | rs6882769 | 22037555 | 1.96E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 5 | 40657952 | rs7730020 | T | C | rs7730020 | 22037555 | 8.38E-09 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 40674979 | rs11954639 | C | T | rs11954639 | 20889312 | 8.44E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 40712797 | rs1345778 | A | C | rs1345778 | 22037555 | 6.55E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | TTC33 |
| 5 | 40748268 | rs2329353 | G | A | rs2329353 | 22037555 | 7.35E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TTC33 |
| 5 | 40752536 | rs6868517 | A | G | rs6868517 | 22037555 | 5.35E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TTC33 |
| 5 | 40753877 | rs3792826 | G | A | rs3792826 | 22037555 | 1.84E-11 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TTC33 |
| 5 | 40767397 | rs1002424 | A | G | rs1002424 | 22037555 | 5.21E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PRKAA1 |
| 5 | 40790551 | rs10074991 | G | A | rs10074991 | 22037555 | 4.21E-10 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PRKAA1 |
| 5 | 40791884 | rs13361707 | C | T | rs13361707 | 22037555 | 7.77E-08 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PRKAA1 |
| 5 | 40810426 | rs1001684 | C | A | rs1001684 | 22037555 | 5.08E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 40829311 | rs6876367 | C | T | rs6876367 | 22037555 | 8.82E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 40835627 | rs10065570 | C | T | rs10065570 | 20889312 | 6.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 40835627 | rs10065570 | C | T | rs10065570 | 22037555 | 9.80E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 41363888 | rs319003 | C | T | rs319003 | 19197363 | 8.23E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 43452252 | rs6451695 | T | C | rs6451695 | 20889312 | 9.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 50152467 | rs27964 | T | C | rs27964 | 22037555 | 3.51E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 5 | 51010325 | rs2161539 | T | A | rs2161539 | 20889312 | 7.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51215874 | rs9291912 | G | A | rs9291912 | 20889312 | 1.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51217851 | rs10042348 | C | G | rs10042348 | 20889312 | 5.00E-06 | NA | 1.29 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51219824 | rs6449937 | G | A | rs6449937 | 20889312 | 3.69E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51222041 | rs12690623 | A | G | rs12690623 | 20889312 | 5.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51234935 | rs4865525 | C | A | rs4865525 | 20889312 | 3.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51246728 | rs4342276 | T | C | rs4342276 | 20889312 | 1.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51444207 | rs13164338 | T | C | rs13164338 | 20889312 | 1.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 51483914 | rs13165318 | C | T | rs13165318 | 20889312 | 3.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 52688918 | rs11746701 | T | C | rs11746701 | 19197363 | 3.11E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 52699931 | rs10805450 | A | G | rs10805450 | 19197363 | 8.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 52710955 | rs11740124 | C | T | rs11740124 | 19197363 | 1.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 53537154 | rs10044346 | C | T | rs10044346 | 20889312 | 8.14E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 53568086 | rs10077344 | C | A | rs10077344 | 20889312 | 2.54E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 53574945 | rs3776649 | A | T | rs3776649 | 20889312 | 1.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 53587702 | rs7704911 | C | T | rs7704911 | 20889312 | 6.83E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 54769420 | rs11747553 | G | A | rs11747553 | 21926974 | 8.11E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 55028160 | rs3846513 | T | C | rs3846513 | 22440650 | 0.00000774 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 5 | 55030944 | rs13173625 | C | T | rs13173625 | 20889312 | 2.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 55071251 | rs4865988 | G | A | rs4865988 | 20889312 | 8.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 56666500 | rs10052004 | G | A | rs10052004 | 23212062 | 4.00E-06 | Positive symptoms | 0.09 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 5 | 57094700 | rs854041 | G | T | rs854041 | 19571811 | 2.33E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 5 | 57491176 | rs2910596 | C | A | rs2910596 | 21747397 | 3.06E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 57972853 | rs158990 | A | G | rs158990 | 19197363 | 5.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 59366269 | rs7732249 | C | T | rs7732249 | 21926974 | 1.23E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 60499131 | rs171748 | A | G | rs171748 | 23974872 | 4.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs171748-A | Research Support, N.I.H., Extramural |
| 5 | 60731458 | rs7709645 | G | C | rs7709645 | 22688191 | 4.00E-08 | NA | 1.11 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 61285098 | rs10514931 | A | T | rs10514931 | 21674006 | 4.46E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 5 | 61672733 | rs784901 | A | G | rs784901 | 21674006 | 8.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | KIF2A |
| 5 | 63905068 | rs889248 | A | G | rs889248 | 20185149 | 7.64E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 5 | 63913687 | rs918604 | T | C | rs918604 | 20185149 | 5.38E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 5 | 64433400 | rs17206232 | C | A | rs17206232 | 23212062 | 1.00E-06 | Positive symptoms | 0.14 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 5 | 64534641 | rs13183791 | C | A | rs13183791 | 20889312 | 6.00E-06 | NA | 1.57 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 65228251 | rs251614 | G | C | rs251614 | 20832056 | 2.86E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ERBB2IP |
| 5 | 65350481 | rs3805466 | C | T | rs3805466 | 19850283 | 1.27E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 5 | 66287883 | rs34691 | A | G | rs34691 | 19571811 | 5.43E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | MAST4 |
| 5 | 67158729 | rs10065943 | G | A | rs10065943 | 24253340 | 6.48E-05 | NA | 1.43 | [1.20-1.70] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 71705384 | rs16878312 | C | A | rs16878312 | 19197363 | 1.87E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 71757953 | rs4703902 | A | G | rs4703902 | 21688384 | 4.80E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | ZNF366 |
| 5 | 71809247 | rs246565 | G | T | rs246565 | 19197363 | 2.93E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 71815614 | rs246580 | G | A | rs246580 | 19197363 | 2.93E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 72580411 | rs4582253 | T | C | rs4582253 | 20832056 | 5.20E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 73661110 | rs294982 | G | C | rs294982 | 19571809 | 4.69E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 76156381 | rs2460508 | T | C | rs2460508 | 21791550 | 1.10E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 5 | 79099464 | rs7735699 | A | C | rs7735699 | 20889312 | 6.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 79099464 | rs7735699 | A | C | rs7735699 | pha002857 | 1.78E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 5 | 79103471 | rs4704591 | G | C | rs4704591 | 20889312 | 9.29E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 83326597 | rs4703978 | A | T | rs4703978 | pha002857 | 3.22E-05 | phs000021 | 1.67 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | EDIL3 | intron | NM_005711 |
| 5 | 89392662 | rs176107 | A | G | rs176107 | 19197363 | 6.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 90064784 | rs12658994 | G | A | rs12658994 | 23358160 | 5.03E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 92232724 | rs1988145 | A | C | rs1988145 | 19197363 | 3.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 95089373 | rs11745143 | C | T | rs11745143 | 19197363 | 7.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 95883847 | rs10055259 | C | A | rs10055259 | 20889312 | 9.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 97027698 | rs1560325 | C | A | rs1560325 | 21674006 | 6.10E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 97030575 | rs10476724 | T | C | rs10476724 | 20889312 | 2.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 97929966 | rs461409 | C | T | rs461409 | 22479419 | 4.32E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 5 | 98497977 | rs4277937 | C | A | rs4277937 | 24253340 | 8.21E-05 | NA | 1.28 | [1.14-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 101647925 | rs7734926 | C | T | rs7734926 | 19571808 | 2.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 101660913 | rs9327836 | T | C | rs9327836 | 19571808 | 2.20E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 101729504 | rs1562960 | C | T | rs1562960 | 19571808 | 1.70E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 101745019 | rs2060833 | G | A | rs2060833 | 19571808 | 1.60E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 101769726 | rs6878284 | C | T | rs6878284 | 23974872 | 9.00E-09 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6878284-C | Research Support, N.I.H., Extramural |
| 5 | 101795490 | rs11746217 | A | G | rs11746217 | 19571808 | 1.70E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 101859317 | rs1502844 | C | T | rs1502844 | 19571808 | 1.00E-06 | NA | 1.09 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1502844-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 101859317 | rs1502844 | C | T | rs1502844 | 21791550 | 1.30E-07 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 5 | 102317042 | rs6596529 | C | T | rs6596529 | 19197363 | 7.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 102323766 | rs11242483 | C | T | rs11242483 | 19197363 | 5.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 102352034 | rs3776859 | A | C | rs3776859 | 19197363 | 6.57E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 102363402 | rs26434 | C | T | rs26434 | 19197363 | 2.59E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 102433409 | rs34813 | G | A | rs34813 | 19197363 | 4.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 102507812 | rs183752 | T | C | rs183752 | 19197363 | 2.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 102520400 | rs26821 | A | C | rs26821 | 19197363 | 4.79E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 102852240 | rs12516214 | G | A | rs12516214 | 19571809 | 6.75E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 102852240 | rs12516214 | G | A | rs12516214 | 20889312 | 1.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 102852240 | rs12516214 | G | A | rs12516214 | pha002857 | 1.79E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 5 | 103073470 | rs6874267 | G | C | rs6874267 | 20889312 | 7.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 103074561 | rs6596546 | A | G | rs6596546 | 20889312 | 8.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 104178282 | rs322872 | T | C | rs322872 | 19197363 | 2.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 104214088 | rs1217461 | G | T | rs1217461 | 19197363 | 1.72E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 105425352 | rs10059955 | T | C | rs10059955 | 19197363 | 5.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 105453357 | rs1435194 | C | A | rs1435194 | 19197363 | 1.92E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 105854131 | rs6891659 | G | A | rs6891659 | 19850283 | 3.01E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 5 | 106090828 | rs11952719 | C | T | rs11952719 | 22037555 | 6.02E-08 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 5 | 106665710 | rs1423341 | A | G | rs1423341 | 20889312 | 8.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 106675142 | rs17344779 | G | C | rs17344779 | 20889312 | 9.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 106724588 | rs252817 | C | T | rs252817 | 20889312 | 2.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 106757399 | rs252801 | G | A | rs252801 | 20889312 | 2.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 110979158 | rs1379552 | T | C | rs1379552 | 19197363 | 4.03E-07 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 111004758 | rs17133574 | T | C | rs17133574 | 19197363 | 4.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 111107115 | rs173896 | T | A | rs173896 | 20889312 | 7.00E-06 | NA | 1.43 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 111107115 | rs173896 | T | A | rs173896 | pha002857 | 5.04E-05 | phs000021 | 1.49 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NREP | intron | NM_001142474 |
| 5 | 111628901 | rs7706772 | C | T | rs7706772 | 22648509 | 4.93E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 5 | 112580290 | rs17323670 | T | C | rs17323670 | 20889312 | 7.00E-06 | NA | 1.75 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 113440892 | rs1487222 | G | A | rs1487222 | 21791550 | 7.30E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 5 | 115484252 | rs11957382 | T | C | rs11957382 | 19197363 | 1.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 115561128 | rs1382342 | C | A | rs1382342 | 19197363 | 2.57E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 115568757 | rs253959 | T | C | rs253959 | 22688191 | 8.00E-06 | NA | 1.21 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 115692083 | rs166204 | G | A | rs166204 | 19197363 | 3.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 115693892 | rs27368 | G | A | rs27368 | 19197363 | 2.95E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 115701098 | rs1421847 | T | C | rs1421847 | 19197363 | 2.87E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 115709156 | rs9327000 | A | C | rs9327000 | 19197363 | 2.65E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 117260126 | rs4301259 | C | T | rs4301259 | 19197363 | 3.09E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 117371464 | rs10040138 | G | A | rs10040138 | 19197363 | 5.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 120782266 | rs1594002 | C | G | rs1594002 | 19571811 | 2.68E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 5 | 124559084 | rs13183660 | T | G | rs13183660 | 21688384 | 4.66E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 5 | 127169212 | rs245201 | A | G | rs245201 | 19023125 | 9.00E-08 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 127200523 | rs151879 | T | C | rs151879 | 19023125 | 7.86E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 127203192 | rs245178 | C | T | rs245178 | 19023125 | 1.22E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 127378502 | rs17675435 | A | G | rs17675435 | 21926974 | 3.53E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 128991232 | rs25820 | C | T | rs25820 | 20889312 | 1.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 129005735 | rs30665 | G | A | rs30665 | 20889312 | 3.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 129093608 | rs13183333 | G | A | rs13183333 | 19571809 | 5.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 129817919 | rs11242025 | G | A | rs11242025 | 19571811 | 8.67E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 5 | 131315884 | rs2240525 | G | A | rs2240525 | 21747397 | 5.27E-06 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 132588357 | rs9327649 | T | C | rs9327649 | 19571811 | 9.93E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | FSTL4 |
| 5 | 133017882 | rs758309 | G | A | rs758309 | 19197363 | 2.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 135400057 | rs10043360 | T | A | rs10043360 | 20889312 | 3.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135467309 | rs9327743 | C | G | rs9327743 | 20889312 | 9.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135484563 | rs6596288 | A | G | rs6596288 | 20889312 | 6.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135491396 | rs10056474 | C | G | rs10056474 | 20889312 | 4.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135515738 | rs6886699 | T | C | rs6886699 | 20889312 | 3.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135519848 | rs11242316 | C | G | rs11242316 | 20889312 | 4.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135520009 | rs7732110 | G | A | rs7732110 | 20889312 | 5.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135537777 | rs10041689 | G | A | rs10041689 | 20889312 | 1.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135697624 | rs2673926 | G | A | rs2673926 | 20889312 | 2.20E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135705674 | rs2673925 | G | A | rs2673925 | 20889312 | 2.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135706851 | rs2649696 | T | C | rs2649696 | 20889312 | 6.77E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135717640 | rs2524282 | T | G | rs2524282 | 20889312 | 5.26E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135721447 | rs2673913 | C | G | rs2673913 | 20889312 | 3.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 135733441 | rs1499762 | C | A | rs1499762 | 20889312 | 6.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 136221940 | rs1125470 | C | A | rs1125470 | 21674006 | 8.18E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 137684732 | rs1052648 | G | A | rs1052648 | 19571809 | 9.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 137707315 | rs757647 | G | A | rs757647 | 20889312 | 6.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 137739040 | rs4835789 | A | T | rs4835789 | 20889312 | 9.33E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 142387961 | rs3822398 | C | T | rs3822398 | 19571811 | 1.59E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | ARHGAP26 |
| 5 | 143018221 | rs4912929 | T | C | rs4912929 | 21688384 | 5.85E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 5 | 143019997 | rs6898504 | C | T | rs6898504 | 21688384 | 8.17E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 5 | 144586077 | rs7719533 | C | T | rs7719533 | 21674006 | 3.55E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 5 | 144605231 | rs2547002 | C | A | rs2547002 | 20889312 | 6.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 145753001 | rs1991800 | G | A | rs1991800 | 19197363 | 4.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 145780692 | rs2304066 | C | T | rs2304066 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 145789259 | rs6868716 | T | C | rs6868716 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 146028540 | rs1530419 | A | C | rs1530419 | 22037555 | 1.93E-08 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PPP2R2B |
| 5 | 146111707 | rs3910815 | C | T | rs3910815 | 19197363 | 4.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 146610829 | rs31031 | T | C | rs31031 | 22883433 | 1.68E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 150409477 | rs2277940 | T | C | rs2277940 | 21926974 | 1.27E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 150933411 | rs3097775 | A | G | rs3097775 | 19197363 | 6.55E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 151333011 | rs10067788 | A | C | rs10067788 | 20889312 | 3.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 151524210 | rs154690 | T | C | rs154690 | 20889312 | 9.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 151566100 | rs294959 | A | G | rs294959 | 20889312 | 9.75E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 152288453 | rs4262150 | T | G | rs4262150 | 22688191 | 7.00E-06 | NA | 1.22 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 152460391 | rs2349026 | A | G | rs2349026 | 19197363 | 6.55E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 152540354 | rs2910032 | C | T | rs2910032 | 23974872 | 4.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2910032-C | Research Support, N.I.H., Extramural |
| 5 | 152654479 | rs17504622 | C | T | rs17504622 | 23974872 | 3.00E-09 | NA | 1.24 | [1.17-1.31] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs17504622-T | Research Support, N.I.H., Extramural |
| 5 | 152797487 | rs12522297 | G | A | rs12522297 | 21926974 | 7.24E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 153477465 | rs984078 | G | A | rs984078 | 19571811 | 5.51E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 5 | 156065593 | rs32063 | T | C | rs32063 | 22037555 | 1.44E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SGCD |
| 5 | 156065646 | rs6877490 | A | G | rs6877490 | 22037555 | 7.28E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SGCD |
| 5 | 156811443 | rs10063413 | G | A | rs10063413 | 20889312 | 1.26E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 156942285 | rs11740562 | A | G | rs11740562 | 20889312 | 1.00E-06 | NA | 1.56 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 156992215 | rs6878446 | G | A | rs6878446 | 20889312 | 2.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 156997414 | rs11749965 | T | C | rs11749965 | 20889312 | 5.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 157001325 | rs6556091 | A | T | rs6556091 | 20889312 | 6.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 157020610 | rs10063216 | A | G | rs10063216 | 20889312 | 4.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 157302089 | rs6556290 | T | C | rs6556290 | 19571811 | 7.96E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 5 | 159282902 | rs31684 | C | T | rs31684 | 19197363 | 2.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 159390877 | rs952037 | C | T | rs952037 | 20889312 | 1.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 159448136 | rs2176830 | C | T | rs2176830 | 22037555 | 9.21E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TTC1 |
| 5 | 159463556 | rs2271944 | G | C | rs2271944 | 22037555 | 9.32E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TTC1 |
| 5 | 159473094 | rs11749533 | C | A | rs11749533 | 22037555 | 7.42E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TTC1 |
| 5 | 161790414 | rs6871616 | G | A | rs6871616 | 19197363 | 6.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 162023980 | rs2431268 | G | A | rs2431268 | 19197363 | 3.23E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 163560093 | rs6862056 | T | C | rs6862056 | 19571809 | 5.36E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 164692816 | rs7732563 | G | A | rs7732563 | 19571809 | 9.77E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 165079673 | rs262776 | G | A | rs262776 | 20185149 | 3.15E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 5 | 165655853 | rs1353920 | G | T | rs1353920 | 21926974 | 3.06E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 165674398 | rs9313313 | G | A | rs9313313 | 19197363 | 3.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 165680534 | rs2173636 | G | A | rs2173636 | 19197363 | 3.43E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 165687214 | rs1499995 | C | T | rs1499995 | 19197363 | 4.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 165723695 | rs1527822 | A | G | rs1527822 | 19197363 | 1.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 166134659 | rs347433 | C | T | rs347433 | 19571809 | 9.87E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 166134659 | rs347433 | C | T | rs347433 | 20889312 | 4.22E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 167090534 | rs17068925 | C | T | rs17068925 | 20185149 | 3.37E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 5 | 167099985 | rs11950863 | C | T | rs11950863 | 20185149 | 8.21E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 5 | 167101161 | rs11134467 | G | A | rs11134467 | 20185149 | 8.40E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 5 | 167114591 | rs10516036 | C | T | rs10516036 | 20185149 | 1.90E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 5 | 168395929 | rs7708885 | C | T | rs7708885 | 19571811 | 9.82E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | SLIT3 |
| 5 | 169512860 | rs10516070 | A | C | rs10516070 | 19197363 | 2.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 169773596 | rs11742042 | C | G | rs11742042 | 20889312 | 5.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 169777274 | rs906361 | C | T | rs906361 | 20889312 | 2.76E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 169777358 | rs906359 | T | C | rs906359 | 20889312 | 5.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 169777436 | rs906358 | C | T | rs906358 | 20889312 | 3.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 5 | 171474120 | rs6892217 | C | T | rs6892217 | 22883433 | 7.81E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 5 | 171984913 | rs1433019 | A | C | rs1433019 | 21926974 | 3.09E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 172864110 | rs6878606 | A | G | rs6878606 | 23358160 | 2.87E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 5 | 173819523 | rs1427958 | T | G | rs1427958 | 21674006 | 6.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 5 | 174918392 | rs267382 | G | A | rs267382 | 24253340 | 9.73E-06 | NA | 1.29 | [1.15-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 5 | 176314639 | rs6875296 | G | A | rs6875296 | 19850283 | 3.85E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 5 | 177616669 | rs2961669 | A | G | rs2961669 | 19571809 | 4.14E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 5 | 178921964 | rs11249632 | C | T | rs11249632 | 24253340 | 2.79E-05 | NA | 1.66 | [1.31-2.12] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 5 | 178947661 | rs6862387 | A | G | rs6862387 | 19571809 | 4.86E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 475489 | rs12210050 | C | T | rs12210050 | 22885689 | 3.00E-06 | EA | 1.2 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 475489 | rs12210050 | C | T | rs12210050 | 22885689 | 4.00E-06 | All | 1.18 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 1100777 | rs2050158 | A | G | rs2050158 | 20889312 | 7.91E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 1409798 | rs4959559 | A | G | rs4959559 | 24253340 | 4.09E-05 | NA | 1.32 | [1.15-1.49] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 2671256 | rs1324495 | A | G | rs1324495 | 21926974 | 1.05E-04 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 7668923 | rs1885487 | G | A | rs1885487 | 21926974 | 2.13E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 8091525 | rs12526001 | C | G | rs12526001 | 19571811 | 7.81E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | EEF1E1 |
| 6 | 9138310 | rs17145441 | T | G | rs17145441 | 19571809 | 4.08E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 9138310 | rs17145441 | T | G | rs17145441 | pha002859 | 1.12E-05 | phs000021 | 1.61 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | LOC100506288 | intron | XR_108670 |
| 6 | 11746576 | rs172405 | G | A | rs172405 | 20832056 | 1.72E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ADTRP |
| 6 | 11752551 | rs2294424 | C | T | rs2294424 | 20832056 | 1.22E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | ADTRP |
| 6 | 11752628 | rs2294423 | C | G | rs2294423 | 20832056 | 1.49E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ADTRP |
| 6 | 11755803 | rs2235401 | G | A | rs2235401 | 20832056 | 2.06E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ADTRP |
| 6 | 11756013 | rs2235398 | C | T | rs2235398 | 20832056 | 2.06E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | ADTRP |
| 6 | 14072395 | rs7744485 | G | T | rs7744485 | 21688384 | 1.39E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 6 | 14073320 | rs9296918 | A | G | rs9296918 | 21688384 | 2.52E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 6 | 14074359 | rs9476484 | C | G | rs9476484 | 21688384 | 1.15E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 6 | 14083063 | rs9382937 | G | A | rs9382937 | 21688384 | 2.02E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 6 | 14598820 | rs7770731 | T | C | rs7770731 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 6 | 15402752 | rs17619975 | T | G | rs17619975 | 19571809 | 1.49E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 15525157 | rs16876575 | C | T | rs16876575 | 19571809 | 4.79E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 16098944 | rs6921677 | C | T | rs6921677 | 19197363 | 5.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 16268059 | rs9367907 | C | T | rs9367907 | 24253340 | 2.07E-05 | NA | 1.92 | [1.42-2.60] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 16279097 | rs739473 | T | C | rs739473 | 24253340 | 2.02E-05 | NA | 1.92 | [1.42-2.60] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 16384665 | rs7738608 | C | T | rs7738608 | 21926974 | 7.97E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 16672760 | rs719316 | C | T | rs719316 | 20889312 | 2.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 16673598 | rs7739556 | G | A | rs7739556 | 19571809 | 7.17E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 16673629 | rs7760476 | A | G | rs7760476 | 19571809 | 1.74E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 16683930 | rs1570488 | T | C | rs1570488 | 19571809 | 5.56E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 16700833 | rs3812207 | G | A | rs3812207 | 20889312 | 7.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 16791976 | rs7745346 | C | G | rs7745346 | 19850283 | 2.16E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 6 | 18207876 | rs214598 | G | C | rs214598 | 20889312 | 6.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 19437583 | rs2172963 | A | G | rs2172963 | 20889312 | 7.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 19449968 | rs4435931 | C | T | rs4435931 | 20889312 | 6.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 19450017 | rs4599622 | C | A | rs4599622 | 20889312 | 8.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 19793675 | rs12110613 | G | A | rs12110613 | 19571809 | 6.31E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 19835009 | rs1980461 | G | C | rs1980461 | 19850283 | 3.21E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 6 | 22504748 | rs2000191 | A | C | rs2000191 | 19197363 | 6.68E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 22606942 | rs10485011 | C | A | rs10485011 | 19197363 | 5.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 23967123 | rs537835 | A | G | rs537835 | 19197363 | 3.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 24624857 | rs9467239 | C | G | rs9467239 | 19571809 | 3.12E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 25255277 | rs2690121 | G | C | rs2690121 | 21926974 | 4.79E-04 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 25437986 | rs6900224 | C | T | rs6900224 | 21926974 | 3.72E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 25707171 | rs9379780 | G | A | rs9379780 | 21926974 | 3.02E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 25707171 | rs9379780 | G | A | rs9379780 | 23637625 | 0.00000378 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 25821224 | rs6939997 | C | T | rs6939997 | 19571809 | 4.90E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 25821224 | rs6939997 | C | T | rs6939997 | 22479419 | 1.90E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SLC17A1 |
| 6 | 25828782 | rs13199775 | A | T | rs13199775 | 19571809 | 1.19E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 25828782 | rs13199775 | A | T | rs13199775 | 22479419 | 1.20E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SLC17A1 |
| 6 | 25836927 | rs9461219 | C | G | rs9461219 | 19571809 | 4.72E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 25836927 | rs9461219 | C | G | rs9461219 | 22479419 | 4.70E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 25873746 | rs9467626 | C | A | rs9467626 | 19571809 | 1.65E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 25873746 | rs9467626 | C | A | rs9467626 | 22479419 | 1.70E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SLC17A3 |
| 6 | 26000885 | rs6901039 | T | G | rs6901039 | 20889312 | 7.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 26118893 | rs198829 | A | G | rs198829 | 23637625 | 0.0000218 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 26126524 | rs198817 | A | G | rs198817 | 21926974 | 3.66E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 26158079 | rs7749823 | A | C | rs7749823 | 23637625 | 0.000000132 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 26365346 | rs3734536 | G | C | rs3734536 | 19571811 | 1.18E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 6 | 26376832 | rs13218591 | T | C | rs13218591 | 21926974 | 6.64E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,T |
| 6 | 26385093 | rs2072806 | C | G | rs2072806 | 19571809 | 9.27E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 26385093 | rs2072806 | C | G | rs2072806 | 22479419 | 9.30E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | BTN2A2 |
| 6 | 26392515 | rs2072803 | G | C | rs2072803 | 19571809 | 8.19E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 26392515 | rs2072803 | G | C | rs2072803 | 22479419 | 8.20E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | BTN2A2 |
| 6 | 26463660 | rs13195509 | G | A | rs13195509 | 19197363 | 3.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 27047256 | rs6904071 | G | A | rs6904071 | 19571809 | 1.78E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27047256 | rs6904071 | G | A | rs6904071 | 22479419 | 1.80E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 27059443 | rs926300 | A | T | rs926300 | 19571809 | 1.06E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27059443 | rs926300 | A | T | rs926300 | 22479419 | 1.10E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 27091425 | rs6913660 | C | A | rs6913660 | 19571809 | 2.36E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27091425 | rs6913660 | C | A | rs6913660 | 21791550 | 1.70E-11 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 27091425 | rs6913660 | C | A | rs6913660 | 23164818 | 0.000023 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 6 | 27136225 | rs13219181 | A | G | rs13219181 | 19571809 | 1.29E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27136225 | rs13219181 | A | G | rs13219181 | 22479419 | 1.30E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27143883 | rs13194053 | T | C | rs13194053 | 19571809 | 1.00E-08 | EA | 1.28 | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs13194053-T | Research Support, N.I.H., Extramural |
| 6 | 27143883 | rs13194053 | T | C | rs13194053 | 19571811 | 1.00E-08 | NA | 1.22 | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs13194053-T | NA | T | NA |
| 6 | 27143883 | rs13194053 | T | C | rs13194053 | 22479419 | 9.50E-09 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 27185664 | rs13219354 | T | C | rs13219354 | 19571809 | 1.12E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27185792 | rs3800307 | T | A | rs3800307 | 19571809 | 4.35E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27185792 | rs3800307 | T | A | rs3800307 | 22479419 | 4.40E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 27205422 | rs13212921 | C | T | rs13212921 | 19571809 | 1.28E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27205422 | rs13212921 | C | T | rs13212921 | 22479419 | 1.30E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 27229265 | rs4452638 | G | A | rs4452638 | 19571809 | 2.68E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27229265 | rs4452638 | G | A | rs4452638 | 22479419 | 2.70E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 27231150 | rs6938200 | A | G | rs6938200 | 19571809 | 3.02E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27231150 | rs6938200 | A | G | rs6938200 | 22479419 | 3.00E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27248931 | rs6932590 | T | C | rs6932590 | 19571808 | 1.00E-12 | NA | 1.16 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6932590-T | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 27248931 | rs6932590 | T | C | rs6932590 | 19571809 | 7.13E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27248931 | rs6932590 | T | C | rs6932590 | 21791550 | 1.60E-10 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 27248931 | rs6932590 | T | C | rs6932590 | 23164818 | 0.000025 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 6 | 27256102 | rs3800316 | A | C | rs3800316 | 19571809 | 3.81E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27256102 | rs3800316 | A | C | rs3800316 | 21926974 | 1.57E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 27256102 | rs3800316 | A | C | rs3800316 | 22479419 | 3.80E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 27261324 | rs7746199 | C | T | rs7746199 | 19197363 | 4.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 27261324 | rs7746199 | C | T | rs7746199 | 19571809 | 5.03E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27261324 | rs7746199 | C | T | rs7746199 | 22479419 | 5.00E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 27263641 | rs3800318 | A | T | rs3800318 | 19571809 | 6.38E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27263641 | rs3800318 | A | T | rs3800318 | 22479419 | 6.40E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27278020 | rs16897515 | C | A | rs16897515 | 19571809 | 1.83E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27278020 | rs16897515 | C | A | rs16897515 | 22479419 | 1.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | POM121L2 |
| 6 | 27278020 | rs16897515 | C | A | rs16897515 | 23894747 | 4.00E-07 | EA | 1.3 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs16897515-C | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 6 | 27413924 | rs13195040 | A | G | rs13195040 | 19571809 | 2.50E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27413924 | rs13195040 | A | G | rs13195040 | 22479419 | 2.50E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27534528 | rs10484399 | A | G | rs10484399 | 19571809 | 3.50E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27534528 | rs10484399 | A | G | rs10484399 | 22479419 | 3.50E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 19571809 | 2.81E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 21926974 | 1.56E-10 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 22479419 | 2.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 22688191 | 3.00E-11 | NA | 1.24 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 23637625 | 0.000000187 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 24280982 | 3.00E-09 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 24280982 | 3.00E-11 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 6 | 27710165 | rs17693963 | A | C | rs17693963 | 24280982 | 4.28E-04 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 6 | 27726731 | rs7776351 | C | T | rs7776351 | 19571809 | 3.22E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27726731 | rs7776351 | C | T | rs7776351 | 22479419 | 3.20E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 27745738 | rs9461407 | G | A | rs9461407 | 19571809 | 4.77E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 27745738 | rs9461407 | G | A | rs9461407 | 22479419 | 4.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 28203300 | rs9380069 | A | G | rs9380069 | 19197363 | 6.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 28215446 | rs1233710 | C | T | rs1233710 | 22037552 | 4.76E-11 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ZKSCAN4 |
| 6 | 28227604 | rs1635 | C | A | rs1635 | 22037552 | 7.00E-12 | NA | 1.28 | [1.22-1.37] | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NKAPL |
| 6 | 28250913 | rs2142731 | A | G | rs2142731 | 22037552 | 5.14E-10 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PGBD1 |
| 6 | 28257377 | rs13211507 | T | C | rs13211507 | 21791550 | 1.40E-13 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 28257377 | rs13211507 | T | C | rs13211507 | 22479419 | 8.30E-11 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PGBD1 |
| 6 | 28257377 | rs13211507 | T | C | rs13211507 | 23164818 | 5.20E-09 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 6 | 28395506 | rs1339898 | C | T | rs1339898 | 21926974 | 2.71E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 28411244 | rs13190937 | G | A | rs13190937 | 23637625 | 0.000123 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 28542520 | rs370520 | C | T | rs370520 | 19571811 | 9.09E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | SCAND3 |
| 6 | 28980707 | rs3130893 | A | G | rs3130893 | 23637625 | 0.00000383 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 29230683 | rs3130827 | T | C | rs3130827 | 21926974 | 3.20E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 29337500 | rs6934993 | A | G | rs6934993 | 19197363 | 3.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 29434414 | rs4713226 | G | A | rs4713226 | 23212062 | 1.37E-06 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 6 | 29704316 | rs1736915 | G | A | rs1736915 | 21926974 | 3.73E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 29746869 | rs1633021 | T | C | rs1633021 | 19197363 | 5.43E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 29799746 | rs2517898 | C | G | rs2517898 | 20185149 | 7.99E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 6 | 29806062 | rs2254071 | T | C | rs2254071 | 20185149 | 8.39E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 6 | 29899677 | rs2524005 | G | A | rs2524005 | 22688191 | 5.00E-07 | NA | 1.32 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 29970589 | rs7758512 | T | G | rs7758512 | 19197363 | 1.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 29979579 | rs9261129 | T | C | rs9261129 | 19197363 | 3.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 30004052 | rs3869068 | C | T | rs3869068 | 19197363 | 3.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 30039240 | rs2301753 | G | T | rs2301753 | 19197363 | 3.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 30040810 | rs2074480 | T | G | rs2074480 | 19197363 | 3.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 30041009 | rs2074479 | A | G | rs2074479 | 19197363 | 3.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 30043992 | rs3807034 | T | C | rs3807034 | 19197363 | 8.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 30044827 | rs3807035 | C | T | rs3807035 | 19197363 | 8.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 30165273 | rs2523722 | C | T | rs2523722 | 22883433 | 1.00E-16 | NA | 1.25 | [1.12-1.39] | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2523722-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30165273 | rs2523722 | C | T | rs2523722 | 23637625 | 0.000000254 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30174131 | rs2021722 | C | A,T | rs2021722 | 21926974 | 2.00E-12 | NA | 1.15 | [1.11-1.19] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2021722-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 30224889 | rs928824 | C | T | rs928824 | 24253340 | 3.98E-05 | NA | 1.85 | [1.40-2.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30227340 | rs2516712 | C | A | rs2516712 | 24253340 | 8.80E-05 | NA | 1.83 | [1.38-2.42] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30248424 | rs2844753 | T | C | rs2844753 | 24253340 | 6.27E-05 | NA | 1.81 | [1.38-2.38] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 30278112 | rs1264608 | C | T | rs1264608 | 24253340 | 7.13E-05 | NA | 1.81 | [1.38-2.38] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30279059 | rs1268447 | C | T | rs1268447 | 24253340 | 6.23E-05 | NA | 1.81 | [1.38-2.38] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30293483 | rs1264583 | C | T | rs1264583 | 24253340 | 6.50E-05 | NA | 1.81 | [1.38-2.38] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30321732 | rs3130375 | C | A | rs3130375 | 19571811 | 3.66E-07 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 6 | 30471520 | rs2429657 | A | G | rs2429657 | 21926974 | 4.67E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 30627867 | rs542566633 | T | C | rs9262138 | 24253340 | 2.81E-06 | NA | 2.01 | [1.52-2.67] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 30627867 | rs9262138 | T | C | rs9262138 | 24253340 | 2.81E-06 | NA | 2.01 | [1.52-2.67] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 30698541 | rs1064627 | A | G | rs1064627 | 21926974 | 8.39E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 30782002 | rs886424 | C | T | rs886424 | 22688191 | 9.00E-07 | NA | 1.37 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 30938883 | rs554543329 | A | G | rs9368649 | 19571809 | 5.50E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 30938883 | rs554543329 | A | G | rs9368649 | 20889312 | 4.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 30938883 | rs9368649 | A | G | rs9368649 | 19571809 | 5.50E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 30938883 | rs9368649 | A | G | rs9368649 | 20889312 | 4.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 30953105 | rs9295938 | G | A | rs9295938 | 21926974 | 3.95E-04 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 30972121 | rs2844668 | T | A | rs2844668 | 23358160 | 9.65E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,T |
| 6 | 30983326 | rs1619376 | A | G | rs1619376 | 23358160 | 6.42E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 30993236 | rs4713419 | A | G | rs4713419 | 19571809 | 5.63E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 31005726 | rs2844670 | G | A | rs2844670 | 23358160 | 8.48E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31045554 | rs9378152 | C | G | rs9378152 | 22883433 | 4.92E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31049655 | rs9380215 | G | A | rs9380215 | 22883433 | 3.74E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31055018 | rs12527394 | G | A | rs12527394 | 22883433 | 3.76E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31058178 | rs4947296 | T | C | rs4947296 | 22883433 | 3.74E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31066419 | rs9263509 | C | T | rs9263509 | 20889312 | 3.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 31070522 | rs9394037 | G | A | rs9394037 | 22883433 | 2.41E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31074128 | rs4947302 | C | T | rs4947302 | 22883433 | 5.26E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31074148 | rs4947246 | G | T | rs4947246 | 22883433 | 5.11E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31077405 | rs9391709 | G | C | rs9391709 | 22883433 | 5.11E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31079264 | rs2233984 | C | T | rs2233984 | 22883433 | 5.11E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31093587 | rs3815087 | G | A | rs3815087 | 21791550 | 6.70E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 31105413 | rs1265099 | A | G | rs1265099 | 21926974 | 3.19E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31272261 | rs6457374 | C | T | rs6457374 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31277686 | rs1634788 | T | A | rs1634788 | 20889312 | 4.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 31331829 | rs2523554 | C | T | rs2523554 | 19197363 | 1.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31353329 | rs2596565 | G | A | rs2596565 | 23637625 | 0.00000933 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31353593 | rs2844529 | G | A | rs2844529 | 19197363 | 3.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31354104 | rs2428486 | T | C | rs2428486 | 19197363 | 3.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31362930 | rs2523467 | C | T | rs2523467 | 19197363 | 4.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31389784 | rs2844511 | A | G | rs2844511 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31432125 | rs2284178 | C | T | rs2284178 | 19197363 | 6.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31432125 | rs2284178 | C | T | rs2284178 | 23637625 | 0.000331 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31434111 | rs3094604 | A | G | rs3094604 | 21926974 | 7.16E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31448976 | rs3099844 | C | A | rs3099844 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31448976 | rs3099844 | C | A | rs3099844 | 19571808 | 9.10E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31464739 | rs3828903 | G | A | rs3828903 | 23358160 | 7.23E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31465819 | rs3828914 | C | T | rs3828914 | 23358160 | 9.70E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31476854 | rs2844498 | C | T | rs2844498 | 19197363 | 7.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31568469 | rs2857595 | G | A | rs2857595 | 19197363 | 5.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31601843 | rs3115663 | T | C | rs3115663 | 19197363 | 4.35E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 31602967 | rs1046089 | G | A | rs1046089 | 23894747 | 4.00E-06 | EA | 1.3 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1046089-G | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 6 | 31620520 | rs3117582 | T | G | rs3117582 | 19197363 | 2.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 31632134 | rs3130618 | C | A | rs3130618 | 19197363 | 4.35E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31688217 | rs805294 | A | G | rs805294 | 23637625 | 0.000111 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 6 | 31721033 | rs3131379 | G | A | rs3131379 | 19197363 | 2.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31729359 | rs707938 | A | G | rs707938 | 21926974 | 2.62E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31870326 | rs558702 | G | A | rs558702 | 19197363 | 2.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 31918860 | rs1270942 | A | G | rs1270942 | 19197363 | 2.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 31940897 | rs389884 | A | G | rs389884 | 19197363 | 1.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32161366 | rs204991 | T | C | rs204991 | 19197363 | 1.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 6 | 32161430 | rs204990 | C | A | rs204990 | 19197363 | 8.68E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32161852 | rs204989 | G | A | rs204989 | 21926974 | 1.28E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32168771 | rs3134942 | G | T | rs3134942 | 19197363 | 1.57E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32171075 | rs3132935 | A | G | rs3132935 | 23894747 | 3.00E-07 | NA | 1.25 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 6 | 32171075 | rs3132935 | A | G | rs3132935 | 23894747 | 5.00E-07 | EA | 1.25 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 6 | 32172993 | rs3131296 | C | T | rs3131296 | 19197363 | 1.57E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 32172993 | rs3131296 | C | T | rs3131296 | 19571808 | 2.00E-10 | NA | 1.19 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs3131296-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 32172993 | rs3131296 | C | T | rs3131296 | 21791550 | 5.10E-11 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 32172993 | rs3131296 | C | T | rs3131296 | 22479419 | 2.30E-10 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NOTCH4 |
| 6 | 32179896 | rs2071286 | C | T | rs2071286 | 20832056 | 3.25E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NOTCH4 |
| 6 | 32261252 | rs7775397 | T | G | rs7775397 | 19197363 | 1.38E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32298137 | rs10484560 | G | A | rs10484560 | 21674006 | 3.93E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | C6orf10 |
| 6 | 32317635 | rs2076537 | G | A | rs2076537 | 21791550 | 2.60E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 32339647 | rs2050189 | T | C | rs2050189 | 21926974 | 2.89E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32358270 | rs3117099 | G | A | rs3117099 | 22688191 | 3.00E-06 | NA | 1.25 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 32429719 | rs9268856 | C | A | rs9268856 | 21926974 | 8.64E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 32429758 | rs9268858 | T | C | rs9268858 | 23637625 | 0.0000166 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32430167 | rs9268862 | A | C | rs9268862 | 23637625 | 0.000000621 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32431962 | rs9268895 | A | G | rs114002140 | 23974872 | 9.00E-14 | NA | 1.67 | [1.63-1.71] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs114002140-A | Research Support, N.I.H., Extramural |
| 6 | 32448599 | rs7748270 | C | A,G,T | rs7748270 | 19571811 | 2.74E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 6 | 32578970 | rs502771 | T | C | rs502771 | 23637625 | 0.0000297 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32581889 | rs4530903 | C | T | rs4530903 | 23212062 | 5.00E-06 | Negative/disorganized symptoms | 0.09 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 6 | 32590925 | rs3129763 | G | A | rs3129763 | 19197363 | 1.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 32595060 | rs9271850 | A | G | rs9271850 | 19571811 | 8.34E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 6 | 32599999 | rs9272105 | G | A | rs9272105 | 21926974 | 1.27E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32602269 | rs9272219 | G | T | rs9272219 | 19571809 | 7.00E-08 | EA | 1.14 | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs9272219-G | Research Support, N.I.H., Extramural |
| 6 | 32602269 | rs9272219 | G | T | rs9272219 | 22479419 | 6.90E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 32605884 | rs2187668 | C | T | rs2187668 | 19197363 | 1.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 32606756 | rs9272535 | G | A | rs9272535 | 19571809 | 8.87E-08 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 32606756 | rs9272535 | G | A | rs9272535 | 22479419 | 8.90E-08 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | HLA-DQA1 |
| 6 | 32666526 | rs1794282 | C | T | rs1794282 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 32755290 | rs7762279 | T | C | rs7762279 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32755290 | rs7762279 | T | C | rs7762279 | 21926974 | 3.35E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32783086 | rs7383287 | A | G | rs7383287 | 21926974 | 5.15E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32804934 | rs241424 | G | A | rs241424 | 19571808 | 4.50E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 32811383 | rs6924102 | A | G | rs6924102 | 19197363 | 1.79E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32818678 | rs2071538 | G | A | rs2071538 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 32865997 | rs241404 | T | C | rs241404 | 19197363 | 3.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32880993 | rs154981 | C | T | rs154981 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 32930795 | rs9276933 | T | C | rs9276933 | 21926974 | 2.76E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 33090836 | rs4713607 | G | A | rs4713607 | 19197363 | 5.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 33096274 | rs3117008 | G | A | rs3117008 | 19197363 | 5.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 33143756 | rs2071025 | A | G | rs2071025 | 22648509 | 9.96E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 6 | 33404064 | rs10807124 | G | A | rs10807124 | 19571811 | 4.49E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | SYNGAP1 |
| 6 | 33851173 | rs16869652 | G | A | rs16869652 | 22885689 | 5.00E-06 | EA | 1.45 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 33917711 | rs10947469 | G | A | rs10947469 | 22883433 | 8.89E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 34142506 | rs9380416 | C | T | rs9380416 | 20185149 | 4.18E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C,T |
| 6 | 34142755 | rs9366841 | T | C | rs9366841 | 20185149 | 7.05E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 6 | 34144073 | rs1106280 | C | T | rs1106280 | 20185149 | 4.38E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 6 | 37102822 | rs9380645 | G | A | rs9380645 | 19197363 | 7.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 39414027 | rs4236064 | G | T | rs4236064 | 19197363 | 1.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 39486517 | rs9380874 | T | C | rs9380874 | 19197363 | 2.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 39526867 | rs1520 | A | G | rs1520 | 19197363 | 3.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 39529692 | rs2092524 | G | A | rs2092524 | 19197363 | 4.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 40689997 | rs4541736 | C | A | rs4541736 | 19197363 | 7.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 40776593 | rs9367079 | A | G | rs9367079 | 19197363 | 8.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 41068423 | rs12189634 | G | T | rs12189634 | 24253340 | 4.41E-05 | NA | 1.67 | [1.31-2.13] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 43153409 | rs16896326 | G | A | rs16896326 | 24253340 | 7.16E-05 | NA | 2.18 | [1.49-3.20] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 43168117 | rs9462875 | A | G | rs9462875 | 21926974 | 1.46E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 43168117 | rs9462875 | A | G | rs9462875 | 23637625 | 0.000161 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 43184132 | rs2273709 | A | C | rs2273709 | 21791550 | 2.60E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 43287893 | rs4714675 | T | C | rs4714675 | 19197363 | 5.52E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 43900443 | rs833621 | T | C | rs833621 | 22883433 | 2.06E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 44601207 | rs4714805 | G | A | rs4714805 | 20832056 | 1.27E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 45529755 | rs4714860 | A | G | rs4714860 | 19571809 | 9.99E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 45529755 | rs4714860 | A | G | rs4714860 | pha002859 | 7.86E-05 | phs000021 | 1.54 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 48287248 | rs676219 | A | G | rs676219 | 19197363 | 7.46E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 48288536 | rs584557 | G | A | rs584557 | 19197363 | 7.46E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 48344746 | rs9296594 | C | G | rs9296594 | 21674006 | 2.61E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 48387129 | rs325286 | T | C | rs325286 | 19197363 | 7.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 48923009 | rs10948466 | T | C | rs10948466 | 19571808 | 7.10E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 51986236 | rs12527406 | T | C | rs12527406 | 19197363 | 6.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 54508401 | rs971199 | C | T | rs971199 | 20889312 | 5.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 56130126 | rs12663282 | G | A | rs12663282 | pha002859 | 4.56E-05 | phs000021 | 1.82 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 6 | 56186443 | rs9475671 | G | A | rs9475671 | 20889312 | 1.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 57186515 | rs1741910 | A | T | rs1741910 | 20889312 | 3.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 57226182 | rs17705499 | C | T | rs17705499 | 20889312 | 9.06E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 64288210 | rs1744163 | G | A | rs1744163 | 21791550 | 6.90E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 67353438 | rs9294715 | T | C | rs9294715 | 20889312 | 9.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 67930937 | rs12215896 | G | A | rs12215896 | 22648509 | 6.17E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 6 | 67960771 | rs12209656 | T | A | rs12209656 | 22648509 | 3.55E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 6 | 69146027 | rs3011917 | A | C | rs3011917 | 21688384 | 5.05E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 6 | 70002111 | rs11751520 | C | T | rs11751520 | 21688384 | 8.66E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | BAI3 |
| 6 | 72620787 | rs9341356 | G | T | rs9341356 | 19571809 | 6.92E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 73143697 | rs2789588 | A | C | rs2789588 | 21791550 | 1.60E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 6 | 73177863 | rs2781564 | A | C | rs2781564 | 21674006 | 7.89E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 74809690 | rs12213921 | G | T | rs12213921 | 19197363 | 4.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 77365406 | rs1457938 | T | C | rs1457938 | 20889312 | 7.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 77369378 | rs1350401 | T | A | rs1350401 | 20889312 | 3.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 77596958 | rs9294040 | G | A | rs9294040 | 19197363 | 8.28E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 79158987 | rs7738834 | C | A | rs7738834 | 21674006 | 3.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 82933309 | rs9361904 | C | T | rs9361904 | 22883433 | 7.95E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 85373520 | rs9344414 | A | G | rs9344414 | 19850283 | 3.87E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 6 | 86181931 | rs4593336 | A | G | rs4593336 | 22440650 | 0.000331 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NT5E |
| 6 | 86861879 | rs220420 | T | A,G | rs220420 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 87351573 | rs1954290 | A | G | rs1954290 | 20889312 | 9.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87352034 | rs1954291 | T | C | rs1954291 | 20889312 | 2.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87352141 | rs10485360 | C | G | rs10485360 | 20889312 | 3.96E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87352507 | rs1935601 | G | A | rs1935601 | 20889312 | 4.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87410024 | rs671837 | A | G | rs671837 | 20889312 | 4.87E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87423256 | rs641422 | C | T | rs641422 | 20889312 | 3.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87427426 | rs689367 | G | T | rs689367 | 20889312 | 5.36E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87438888 | rs616174 | G | A | rs616174 | 20889312 | 7.47E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87448174 | rs670510 | G | A | rs670510 | 20889312 | 6.14E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87466492 | rs493187 | A | G | rs493187 | 20889312 | 3.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 87474096 | rs668111 | A | C | rs668111 | 20889312 | 3.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 88676599 | rs1321501 | A | G | rs1321501 | 21926974 | 1.89E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 89704358 | rs12198521 | C | T | rs12198521 | 20889312 | 8.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 89728221 | rs12527359 | T | A | rs12527359 | 20889312 | 7.75E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 89732101 | rs12201676 | T | C | rs12201676 | 20889312 | 4.00E-08 | NA | 1.31 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 90096683 | rs7762955 | T | C | rs7762955 | 19571809 | 9.75E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 90595849 | rs292246 | A | G | rs292246 | 19197363 | 3.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 94069681 | rs1492967 | G | A | rs1492967 | 21926974 | 3.01E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 96462712 | rs6913319 | C | G | rs6913319 | 20832056 | 1.55E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 96464414 | rs6934593 | T | C | rs6934593 | 20832056 | 1.14E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FUT9 |
| 6 | 96474372 | rs9404150 | A | G | rs9404150 | 19571809 | 4.33E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 98517095 | rs4466255 | C | A | rs4466255 | 19850283 | 1.61E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 6 | 98896667 | rs9321063 | A | G | rs9321063 | 19023125 | 5.66E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 98919264 | rs9491640 | C | A | rs9491640 | 19023125 | 9.00E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 98927363 | rs9491646 | G | A | rs9491646 | 19023125 | 1.59E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 99233987 | rs9492351 | A | G | rs9492351 | 19571809 | 8.84E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 99233987 | rs9492351 | A | G | rs9492351 | 20889312 | 7.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100564829 | rs4840117 | T | C | rs4840117 | 21674006 | 5.94E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 100698564 | rs9390162 | A | C,G,T | rs9390162 | 20889312 | 4.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100723680 | rs9496988 | A | C | rs9496988 | 20889312 | 5.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100729007 | rs4840124 | T | C | rs4840124 | 20889312 | 2.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100732279 | rs9321981 | A | G | rs9321981 | 20889312 | 6.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100740293 | rs3934920 | C | G | rs3934920 | 20889312 | 4.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100744264 | rs10499029 | T | C | rs10499029 | 20889312 | 2.07E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 100756687 | rs2841307 | C | T | rs2841307 | 20889312 | 1.00E-06 | NA | 1.36 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 101873533 | rs1832413 | A | G | rs1832413 | 20832056 | 4.34E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | GRIK2 |
| 6 | 101878734 | rs2787566 | G | A | rs2787566 | 20832056 | 2.80E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | GRIK2 |
| 6 | 101882084 | rs6918619 | A | G | rs6918619 | 20832056 | 4.93E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A,G | GRIK2 |
| 6 | 101966333 | rs10485270 | G | A | rs10485270 | 19197363 | 4.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 101991728 | rs2518220 | A | G | rs2518220 | 19197363 | 3.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 102007227 | rs2852577 | G | A | rs2852577 | 19197363 | 1.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 103646294 | rs7775385 | G | A | rs7775385 | 22037555 | 1.15E-08 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 104222812 | rs7760658 | G | A | rs7760658 | 23358160 | 2.31E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 104593867 | rs9377619 | A | G | rs9377619 | 20889312 | 2.00E-06 | NA | 1.34 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 104593867 | rs9377619 | A | G | rs9377619 | pha002857 | 1.44E-05 | phs000021 | 1.39 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 104753237 | rs270666 | A | C | rs270666 | pha002857 | 6.19E-06 | phs000021 | 1.46 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 104754646 | rs1341118 | C | G,T | rs1341118 | pha002857 | 1.12E-05 | phs000021 | 1.42 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 104759143 | rs9391181 | C | T | rs9391181 | pha002857 | 1.19E-05 | phs000021 | 1.42 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 6 | 104765744 | rs169282 | A | G | rs169282 | pha002857 | 7.76E-06 | phs000021 | 1.42 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 6 | 104765867 | rs447871 | C | T | rs447871 | pha002857 | 1.90E-05 | phs000021 | 1.4 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 6 | 104765922 | rs404900 | G | T | rs404900 | pha002857 | 2.77E-05 | phs000021 | 1.39 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 104766876 | rs6571178 | T | C | rs6571178 | pha002857 | 9.84E-06 | phs000021 | 1.43 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 6 | 104768833 | rs814372 | C | T | rs814372 | pha002857 | 1.37E-05 | phs000021 | 1.41 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 104768977 | rs549374 | C | T | rs549374 | pha002857 | 2.00E-05 | phs000021 | 1.4 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 104774231 | rs7764670 | A | G | rs7764670 | pha002857 | 2.19E-05 | phs000021 | 1.42 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 104780499 | rs9391184 | C | T | rs9391184 | pha002857 | 2.39E-05 | phs000021 | 1.41 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 104782345 | rs10499040 | C | G | rs10499040 | 20889312 | 4.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 104782345 | rs10499040 | C | G | rs10499040 | pha002857 | 2.04E-06 | phs000021 | 1.49 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 104814437 | rs271878 | A | C | rs271878 | 20889312 | 4.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 104814437 | rs271878 | A | C | rs271878 | pha002857 | 2.75E-06 | phs000021 | 1.47 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 6 | 104814799 | rs271876 | C | T | rs271876 | 20889312 | 7.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 104814799 | rs271876 | C | T | rs271876 | pha002857 | 1.47E-06 | phs000021 | 1.49 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 6 | 106718522 | rs3851210 | C | T | rs3851210 | 19197363 | 5.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 107298061 | rs272583 | T | C | rs272583 | 24253340 | 4.07E-05 | NA | 1.3 | [1.14-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 107328319 | rs7746539 | C | T | rs7746539 | 20889312 | 9.75E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 107384896 | rs311255 | A | C | rs311255 | 20889312 | 4.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 108030405 | rs1624055 | C | T | rs1624055 | 20832056 | 4.97E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SCML4 |
| 6 | 108033895 | rs1629910 | T | C | rs1629910 | 20832056 | 2.73E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SCML4 |
| 6 | 108323759 | rs17069122 | G | A | rs17069122 | 20889312 | 1.00E-06 | NA | 2.33 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 108331221 | rs9480825 | T | A | rs9480825 | 20889312 | 1.46E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 108332351 | rs7770621 | A | G | rs7770621 | 20889312 | 3.47E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 110235126 | rs6914221 | G | C | rs6914221 | 19571809 | 2.39E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 114490281 | rs9320481 | T | A | rs9320481 | 24086445 | 1.04E-06 | vermisL10,Imputed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 114492599 | rs9320482 | T | C | rs9320482 | 24086445 | 1.14E-06 | vermisL10,Typed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 114508475 | rs9488340 | A | G | rs9488340 | 24086445 | 8.20E-07 | vermisL10,Imputed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 114513862 | rs9374441 | A | G | rs9374441 | 24086445 | 8.25E-06 | vermisL10,Typed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 114522082 | rs6936717 | A | G | rs6936717 | 24086445 | 8.46E-07 | vermisL10,Imputed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 114522398 | rs9400701 | T | C | rs9400701 | 24086445 | 8.46E-07 | vermisL10,Imputed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 6 | 114538983 | rs9320486 | C | T | rs9320486 | 24086445 | 3.19E-06 | vermisL10,Typed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 114547249 | rs7746324 | A | C | rs7746324 | 24086445 | 2.74E-06 | vermisL10,Typed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 114547981 | rs9488343 | G | A | rs9488343 | 24086445 | 7.00E-07 | vermisL10,Imputed | 0.04 | [NA] unit increase | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 116030515 | rs9320546 | C | T | rs9320546 | 19197363 | 6.59E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 116821146 | rs7775839 | T | C | rs7775839 | 20832056 | 6.86E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | BET3L |
| 6 | 116829323 | rs9400929 | C | T | rs9400929 | 20832056 | 1.54E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | BET3L |
| 6 | 116837310 | rs3734309 | G | A | rs3734309 | 20832056 | 7.98E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FAM26E |
| 6 | 116859771 | rs2064877 | A | G | rs2064877 | 20832056 | 2.50E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | FAM26D |
| 6 | 116859793 | rs2064878 | T | C | rs2064878 | 20832056 | 1.11E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FAM26D |
| 6 | 116861883 | rs9372465 | G | C | rs9372465 | 20832056 | 2.44E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FAM26D |
| 6 | 116867514 | rs9374611 | C | T | rs9374611 | 20832056 | 3.00E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FAM26D |
| 6 | 116871496 | rs6568947 | C | T | rs6568947 | 20832056 | 2.50E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | FAM26D |
| 6 | 116889576 | rs980214 | T | G | rs980214 | 20832056 | 2.32E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 6 | 116899322 | rs7757967 | C | G | rs7757967 | 20832056 | 1.53E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | RWDD1 |
| 6 | 117065543 | rs1577759 | C | G | rs1577759 | 20832056 | 1.76E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 119678456 | rs7765368 | A | G | rs7765368 | 19571811 | 5.11E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 6 | 121932660 | rs11759649 | T | C | rs11759649 | 19197363 | 5.10E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 121986316 | rs10872226 | T | C | rs10872226 | 19197363 | 1.89E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 122008684 | rs11757506 | G | A | rs11757506 | 19197363 | 1.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 122125094 | rs2040424 | T | C | rs2040424 | 19197363 | 5.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 122136209 | rs13219211 | A | G | rs13219211 | 19197363 | 8.20E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 124342663 | rs6917824 | A | G | rs6917824 | 23894747 | 4.00E-06 | EA | 1.3 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6917824-G | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 6 | 124342663 | rs6917824 | A | G | rs6917824 | 23894747 | 4.00E-06 | NA | NA | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 6 | 126052729 | rs4895799 | C | T | rs4895799 | 19197363 | 4.05E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 126165003 | rs584032 | G | A | rs584032 | 19197363 | 3.94E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 127492840 | rs2326566 | G | T | rs2326566 | 21747397 | 4.68E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 128305888 | rs9402011 | T | C | rs9402011 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 128311140 | rs9375543 | T | C | rs9375543 | 19197363 | 7.75E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 128313088 | rs3903663 | A | G | rs3903663 | 19197363 | 2.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 132963053 | rs9389020 | T | C | rs9389020 | 19197363 | 5.87E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 133159414 | rs7768053 | C | G | rs7768053 | 22648509 | 1.30E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 6 | 133851810 | rs17053540 | C | T | rs17053540 | 20889312 | 3.69E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 135739355 | rs11154801 | C | A | rs11154801 | 21795503 | 6.23E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 6 | 135746884 | rs7759971 | C | T | rs7759971 | 21795503 | 6.23E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | C |
| 6 | 136052948 | rs2038549 | G | A | rs2038549 | 21795503 | 3.27E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | G |
| 6 | 136056234 | rs1475069 | A | C | rs1475069 | 21795503 | 6.97E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 6 | 136431265 | rs9389370 | C | G | rs9389370 | 19850283 | 2.88E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 6 | 138484125 | rs72986828 | T | G | rs72986828 | 22883433 | 5.61E-06 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 138484764 | rs6907714 | A | G | rs6907714 | 22883433 | 2.03E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 139219390 | rs1188846 | C | T | rs1188846 | 21674006 | 8.30E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ECT2L |
| 6 | 140206760 | rs4895576 | C | T | rs4895576 | 21795503 | 7.83E-11 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | T |
| 6 | 141197113 | rs2066036 | C | G | rs2066036 | 21795503 | 4.60E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 6 | 141453145 | rs7738388 | T | C | rs7738388 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 142359683 | rs6910529 | C | T | rs6910529 | 22037555 | 4.40E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 6 | 142429903 | rs4455685 | G | A | rs4455685 | 20889312 | 9.62E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 143115636 | rs491414 | G | A | rs491414 | 19571809 | 9.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 143115760 | rs533173 | T | C | rs533173 | 19571809 | 6.49E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 143117774 | rs552928 | A | G | rs552928 | 19571809 | 8.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 143119086 | rs550149 | T | A | rs550149 | 19571809 | 7.64E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 6 | 145322256 | rs12526618 | A | T | rs12526618 | 21926974 | 9.90E-09 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 146479408 | rs6913400 | G | C | rs6913400 | 20889312 | 2.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 147856512 | rs9497801 | A | T | rs9497801 | 20889312 | 7.88E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 148897510 | rs208704 | A | G | rs208704 | 19197363 | 6.13E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 150577872 | rs10484499 | A | G | rs10484499 | 19197363 | 2.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 151000532 | rs9480526 | G | A | rs9480526 | 19197363 | 3.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 151016738 | rs654698 | A | G | rs654698 | 19197363 | 4.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 151952890 | rs6908732 | G | A | rs6908732 | 20832056 | 3.41E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 153215035 | rs570343 | C | A | rs570343 | 21688384 | 1.49E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 6 | 153269272 | rs4870153 | G | C | rs4870153 | 21688384 | 3.08E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 6 | 153746604 | rs9479600 | C | A | rs9479600 | 20889312 | 7.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 6 | 155001410 | rs6420139 | C | T | rs6420139 | 19197363 | 7.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 155742113 | rs231948 | G | A | rs231948 | 19197363 | 6.95E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 155748212 | rs2281253 | A | C | rs2281253 | 19197363 | 2.08E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 6 | 155751814 | rs231956 | T | C | rs231956 | 19197363 | 5.34E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 156320573 | rs4869880 | C | T | rs4869880 | 22883433 | 9.33E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 6 | 160767183 | rs569919 | C | T | rs569919 | 19197363 | 4.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 160767183 | rs569919 | C | T | rs569919 | 19571808 | 1.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 6 | 160796058 | rs1018234 | C | T | rs1018234 | 19571808 | 2.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 6 | 164815194 | rs2322438 | G | A | rs2322438 | 21674006 | 8.89E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 6 | 166585828 | rs9356434 | T | C | rs9356434 | 19197363 | 7.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 166819774 | rs9355578 | T | C | rs9355578 | 19197363 | 6.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 6 | 166830696 | rs6925364 | A | C | rs6925364 | 19197363 | 3.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 1873084 | rs4721090 | T | C | rs4721090 | 20889312 | 4.95E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1886535 | rs6952808 | G | C | rs6952808 | 20889312 | 2.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1886725 | rs6977733 | T | A | rs6977733 | 20889312 | 4.29E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1892309 | rs11764337 | C | T | rs11764337 | 20889312 | 8.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1892309 | rs11764337 | C | T | rs11764337 | pha002857 | 3.86E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | MAD1L1 | intron | NM_003550 |
| 7 | 1892565 | rs4721121 | T | C | rs4721121 | 20889312 | 4.97E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1920826 | rs10275045 | C | T | rs10275045 | 20889312 | 6.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1920826 | rs10275045 | C | T | rs10275045 | 24280982 | 2.00E-06 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 7 | 1920826 | rs10275045 | C | T | rs10275045 | 24280982 | 2.00E-09 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 7 | 1920826 | rs10275045 | C | T | rs10275045 | 24280982 | 2.08E-04 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 7 | 1921068 | rs10244946 | G | A | rs10244946 | 20889312 | 8.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 1954301 | rs2056480 | G | A | rs2056480 | 20889312 | 6.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2004421 | rs12666575 | C | T | rs12666575 | 22688191 | 2.00E-09 | NA | 1.12 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 2017445 | rs6461049 | C | T | rs6461049 | 23974872 | 6.00E-13 | NA | 1.11 | [1.08-1.13] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs6461049-T | Research Support, N.I.H., Extramural |
| 7 | 2036669 | rs4721295 | T | G | rs4721295 | 19571809 | 3.74E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 2036669 | rs4721295 | T | G | rs4721295 | 20889312 | 3.42E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2036669 | rs4721295 | T | G | rs4721295 | pha002857 | 2.21E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | MAD1L1 | intron | NM_003550 |
| 7 | 2041432 | rs1107592 | A | G | rs1107592 | 19571809 | 3.84E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 2041432 | rs1107592 | A | G | rs1107592 | 20889312 | 2.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2041432 | rs1107592 | A | G | rs1107592 | pha002857 | 3.85E-06 | phs000021 | 1.07 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | MAD1L1 | intron | NM_003550 |
| 7 | 2139990 | rs3778969 | G | A | rs3778969 | 20889312 | 3.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2149967 | rs10224497 | A | G | rs10224497 | 20889312 | 8.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2149967 | rs10224497 | A | G | rs10224497 | pha002857 | 4.88E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | MAD1L1 | intron | NM_003550 |
| 7 | 2167939 | rs3800917 | G | A | rs3800917 | 20889312 | 3.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2167939 | rs3800917 | G | A | rs3800917 | pha002857 | 2.47E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | MAD1L1 | intron | NM_003550 |
| 7 | 2184060 | rs4721441 | T | C | rs4721441 | 20889312 | 9.06E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2184902 | rs3779003 | C | T | rs3779003 | 20889312 | 4.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2226162 | rs10226475 | A | G | rs10226475 | 19571811 | 2.18E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | MAD1L1 |
| 7 | 2226162 | rs10226475 | A | G | rs10226475 | 21926974 | 5.06E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 2258084 | rs1639915 | C | G | rs1639915 | 20889312 | 8.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2275993 | rs7787274 | G | A | rs7787274 | 23637625 | 0.000327 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 2298227 | rs2398668 | C | T | rs2398668 | 20889312 | 7.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2316852 | rs7792045 | C | T | rs7792045 | 20889312 | 8.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 2452624 | rs4719530 | C | T | rs4719530 | 21926974 | 9.55E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 3179991 | rs7779245 | T | C | rs7779245 | 22883433 | 9.78E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 3180657 | rs6964682 | C | T | rs6964682 | 22883433 | 8.02E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 4084716 | rs7810949 | C | T | rs7810949 | 19571811 | 6.20E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | SDK1 |
| 7 | 4237801 | rs7810341 | G | A | rs7810341 | 23358160 | 5.01E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 4503701 | rs17134833 | C | T | rs17134833 | 20889312 | 6.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 4799694 | rs6463034 | T | C | rs6463034 | 20889312 | 9.98E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 5267524 | rs4720539 | C | T | rs4720539 | 19197363 | 3.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 5292732 | rs10226233 | C | T | rs10226233 | 19197363 | 6.13E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 5359680 | rs6943227 | G | T | rs6943227 | 19197363 | 8.38E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 7117866 | rs2205541 | C | T | rs2205541 | 21747397 | 1.13E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 7364390 | rs2881814 | A | G | rs2881814 | 20889312 | 4.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7365657 | rs1294610 | T | C | rs1294610 | 20889312 | 8.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7374823 | rs6955140 | T | C | rs6955140 | 20889312 | 1.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7392714 | rs1294622 | T | C | rs1294622 | 20889312 | 8.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7392861 | rs1294623 | A | G | rs1294623 | 20889312 | 3.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7397843 | rs977432 | C | T | rs977432 | 20889312 | 3.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7399096 | rs2159710 | T | G | rs2159710 | 20889312 | 6.82E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7399404 | rs10486158 | C | T | rs10486158 | 20889312 | 6.00E-06 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7401954 | rs7800159 | T | G | rs7800159 | 20889312 | 9.53E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7403015 | rs4724977 | T | C | rs4724977 | 20889312 | 1.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7403978 | rs6974119 | A | G | rs6974119 | 20889312 | 4.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7410988 | rs6960947 | T | C | rs6960947 | 20889312 | 4.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7421019 | rs1294626 | C | A | rs1294626 | 20889312 | 5.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 7424599 | rs1294632 | T | C | rs1294632 | 20889312 | 3.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 8444463 | rs2349188 | T | C | rs2349188 | 20185149 | 8.60E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 7 | 8447955 | rs6463805 | C | T | rs6463805 | 20185149 | 4.16E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 7 | 9019746 | rs4720814 | T | G | rs4720814 | 24253340 | 8.58E-05 | NA | 1.33 | [1.15-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 9019826 | rs4720815 | A | G | rs4720815 | 24253340 | 8.11E-05 | NA | 1.37 | [1.17-1.60] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 7 | 9215329 | rs2057847 | G | A | rs2057847 | 19197363 | 4.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 9283620 | rs7777070 | G | A | rs7777070 | 19197363 | 7.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 10096276 | rs41426 | G | A | rs41426 | 19197363 | 4.13E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 12428803 | rs848016 | G | A | rs848016 | 23358160 | 3.15E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 12929111 | rs17683020 | C | G | rs17683020 | 20889312 | 5.09E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 12937255 | rs17166499 | C | G | rs17166499 | 20889312 | 5.00E-06 | NA | 1.51 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 12943414 | rs28611315 | G | C | rs28611315 | 20889312 | 9.85E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 14209220 | rs7799696 | T | G | rs7799696 | 20889312 | 6.46E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 15883805 | rs17169105 | G | A | rs17169105 | 20832056 | 1.80E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 7 | 15891270 | rs17169111 | T | C | rs17169111 | 20832056 | 3.20E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 7 | 16556076 | rs57025232 | T | C | rs57025232 | 22883433 | 5.87E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 16618982 | rs718796 | T | C | rs718796 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 17571140 | rs1448649 | A | C | rs1448649 | 21795503 | 5.57E-06 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | A |
| 7 | 19148847 | rs985246 | T | G | rs985246 | 19197363 | 7.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 21460818 | rs39298 | C | T | rs39298 | 19197363 | 6.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 22821019 | rs13243243 | C | T | rs13243243 | 21688384 | 6.17E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 7 | 24582774 | rs2529059 | T | C | rs2529059 | 19571809 | 5.56E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 24582774 | rs2529059 | T | C | rs2529059 | pha002859 | 3.32E-05 | phs000021 | 1.5 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 7 | 25299989 | rs2107124 | C | T | rs2107124 | 19197363 | 4.98E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 25303466 | rs2717907 | C | T | rs2717907 | 19197363 | 2.05E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 27681522 | rs2893292 | T | C | rs2893292 | 19197363 | 7.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 28176305 | rs917117 | G | A | rs917117 | 19197363 | 3.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 29615341 | rs715301 | C | T | rs715301 | 21674006 | 2.75E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 7 | 29631927 | rs10499585 | C | T | rs10499585 | 21674006 | 3.14E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 7 | 30220830 | rs12701008 | G | A | rs12701008 | 24253340 | 4.45E-05 | NA | 1.39 | [1.19-1.61] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 30243357 | rs12535035 | A | G | rs12535035 | 24253340 | 9.80E-05 | NA | 1.33 | [1.15-1.54] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 30934659 | rs4723021 | C | T | rs4723021 | 22648509 | 4.66E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 7 | 36620678 | rs4723546 | G | C | rs4723546 | 19571809 | 3.32E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 37618173 | rs1364729 | T | C | rs1364729 | 20889312 | 1.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 37704902 | rs7805339 | G | T | rs7805339 | 20889312 | 3.03E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 38905686 | rs7803397 | T | C | rs7803397 | 22648509 | 2.02E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 7 | 41315586 | rs10486710 | A | T | rs10486710 | 21674006 | 6.04E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 7 | 42229946 | rs10951671 | C | T | rs10951671 | 19197363 | 6.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 7 | 43393603 | rs2330791 | A | C | rs2330791 | 24043878 | 4.30E-05 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2330791-A | Research Support, Non-U.S. Gov't | C | HECW1 |
| 7 | 43919266 | rs2730616 | C | T | rs2730616 | 19197363 | 6.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 43927792 | rs2730617 | C | T | rs2730617 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 43997075 | rs1894752 | C | T | rs1894752 | 19197363 | 6.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 44558859 | rs217426 | A | C | rs217426 | 19571811 | 7.20E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NPC1L1 |
| 7 | 46902789 | rs7803167 | C | T | rs7803167 | 22037555 | 2.41E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 7 | 48462563 | rs875812 | A | C | rs875812 | 19850283 | 1.89E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 7 | 49737206 | rs6962671 | A | G | rs6962671 | 20832056 | 5.09E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 7 | 49738893 | rs10248542 | C | T | rs10248542 | 20832056 | 4.83E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T,C | NA |
| 7 | 50178216 | rs7805656 | T | C | rs7805656 | 19197363 | 7.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 50897276 | rs4947475 | G | A | rs4947475 | 20889312 | 7.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 53390930 | rs7795810 | C | T | rs7795810 | 19197363 | 7.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 53460686 | rs10488321 | C | T | rs10488321 | 19197363 | 6.09E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 53639105 | rs1030306 | C | T | rs1030306 | 19197363 | 8.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 55065119 | rs11238344 | A | G | rs11238344 | 19197363 | 5.15E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 57528311 | rs11135654 | G | A | rs11135654 | 20889312 | 2.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 57565524 | rs4266595 | C | T | rs4266595 | 20889312 | 2.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 57619922 | rs13241368 | C | T | rs13241368 | 20889312 | 1.96E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 57642390 | rs10281732 | T | G | rs10281732 | 20889312 | 6.15E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 57659267 | rs4870675 | T | C | rs4870675 | 20889312 | 1.50E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 57699151 | rs4870684 | C | G,T | rs4870684 | 20889312 | 5.00E-06 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 67146459 | rs1024591 | C | T | rs1024591 | 19571809 | 4.19E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 67165026 | rs12698616 | T | C | rs12698616 | 19571809 | 2.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 71751316 | rs12699131 | A | G | rs12699131 | 21926974 | 2.00E-06 | NA | 1.08 | [1.04-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 73110603 | rs1001220 | C | T | rs1001220 | 19850283 | 7.70E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 7 | 76637441 | rs10278476 | G | A | rs10278476 | 19197363 | 2.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 77985864 | rs4730234 | T | C | rs4730234 | 22883433 | 7.25E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 77988279 | rs12670218 | C | T | rs12670218 | 22883433 | 8.77E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 78516581 | rs1642897 | C | T | rs1642897 | 19197363 | 8.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 78528822 | rs17469166 | T | G | rs17469166 | 20889312 | 8.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 78537682 | rs7791106 | C | T | rs7791106 | 20889312 | 1.25E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 79663989 | rs17153296 | C | T | rs17153296 | 20832056 | 2.85E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 7 | 80145051 | rs1524599 | A | G | rs1524599 | 19197363 | 4.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 80154463 | rs1404313 | G | A | rs1404313 | 19197363 | 2.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 81786220 | rs2367911 | C | T | rs2367911 | 20889312 | 5.00E-06 | NA | 1.77 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 81981195 | rs2368020 | A | G | rs2368020 | 19197363 | 7.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 81990597 | rs7804449 | C | T | rs7804449 | 19197363 | 3.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 82375372 | rs6979348 | C | T | rs6979348 | 20185149 | 2.84E-07 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 7 | 82646210 | rs28156 | T | C | rs28156 | 22883433 | 4.40E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 83314133 | rs302099 | T | C | rs302099 | 21926974 | 7.32E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 83745039 | rs995866 | A | C | rs995866 | 19571809 | 4.40E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 85070736 | rs17159934 | A | C | rs17159934 | 20185149 | 7.66E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 7 | 85075150 | rs1560315 | G | C | rs1560315 | 20185149 | 8.94E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 7 | 85644442 | rs9648874 | G | C | rs9648874 | 20832056 | 2.22E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 7 | 91228686 | rs2430437 | T | C | rs2430437 | 20185149 | 4.63E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 7 | 91657672 | rs12533497 | G | A | rs12533497 | 22479419 | 4.26E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | AKAP9 |
| 7 | 94046541 | rs2521205 | G | T | rs2521205 | 19850283 | 4.54E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 7 | 94580041 | rs12539414 | T | A | rs12539414 | 21688384 | 3.63E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | PPP1R9A |
| 7 | 94589181 | rs10499912 | A | G | rs10499912 | 21688384 | 3.63E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | PPP1R9A |
| 7 | 95068684 | rs6978425 | T | G | rs6978425 | 22037552 | 9.79E-06 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 7 | 96616012 | rs6956369 | G | A | rs6956369 | 20889312 | 2.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 97231644 | rs4729366 | G | A | rs4729366 | 19197363 | 7.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 99460458 | rs580123 | A | G | rs580123 | 20889312 | 8.03E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 99460611 | rs11981167 | T | A | rs11981167 | 20889312 | 3.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 101671721 | rs6465845 | C | T | rs6465845 | 21747397 | 4.32E-06 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 101715222 | rs370760 | G | A | rs370760 | 21747397 | 2.65E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 101724053 | rs404523 | G | A | rs404523 | 21747397 | 3.84E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 101914135 | rs1725604 | C | T | rs1725604 | 20889312 | 4.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 103205617 | rs362725 | A | G | rs362725 | 22479419 | 3.10E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | RELN |
| 7 | 103404815 | rs7341475 | G | A | rs7341475 | 18282107 | 9.00E-07 | 1.58 | [1.31-1.89] | 660 cases; 2,271 controls | NOPOP(2931) | ALL(2931) | NOPOP(2931) | ALL(2931) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7341475-G | Research Support, Non-U.S. Gov't | Comparative Study | G | |
| 7 | 103404815 | rs7341475 | G | A | rs7341475 | 22479419 | 2.90E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | RELN |
| 7 | 105972102 | rs2704955 | G | T | rs2704955 | 21688384 | 3.57E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 7 | 105973489 | rs2704952 | A | T | rs2704952 | 21688384 | 4.44E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 7 | 106007074 | rs179862 | C | T | rs179862 | 21688384 | 1.69E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 7 | 106009721 | rs179863 | C | T | rs179863 | 21688384 | 4.57E-06 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 7 | 107797860 | rs409797 | G | A | rs409797 | 19571809 | 7.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 107797860 | rs409797 | G | A | rs409797 | pha002859 | 8.78E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NRCAM | intron | NM_001037132 |
| 7 | 111078912 | rs38752 | T | G | rs38752 | 21791550 | 4.60E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 7 | 111510866 | rs739617 | C | T | rs739617 | 22479419 | 7.76E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | DOCK4 |
| 7 | 111510963 | rs17158926 | A | T | rs17158926 | 22479419 | 1.61E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | DOCK4 |
| 7 | 111511138 | rs17158930 | A | G | rs17158930 | 22479419 | 1.34E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | DOCK4 |
| 7 | 112994204 | rs2692198 | A | G | rs2692198 | 20889312 | 6.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 113027011 | rs17136288 | T | A | rs17136288 | 20889312 | 5.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 115959205 | rs1918910 | T | C | rs1918910 | 19571811 | 8.56E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 7 | 120167316 | rs10488301 | C | T | rs10488301 | 24253340 | 1.64E-05 | NA | 1.33 | [1.18-1.52] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 120180671 | rs10488302 | C | A | rs10488302 | 20889312 | 5.96E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 121942674 | rs6968240 | C | A | rs6968240 | 21926974 | 4.78E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 121949318 | rs1443753 | T | C | rs1443753 | 19197363 | 7.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 122613859 | rs719605 | T | C | rs719605 | 21688384 | 8.91E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 7 | 126794731 | rs1419425 | G | A | rs1419425 | 19571809 | 5.97E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 126837621 | rs7791345 | A | G | rs7791345 | 19571809 | 1.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 129657882 | rs2242487 | A | G | rs2242487 | 19197363 | 2.15E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 129664312 | rs1464890 | T | C | rs1464890 | 19197363 | 2.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 129670412 | rs4507692 | T | C | rs4507692 | 19197363 | 2.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 7 | 130125849 | rs1990788 | G | A | rs1990788 | 20889312 | 7.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 131041582 | rs6963574 | C | T | rs6963574 | 19571809 | 7.70E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 131041582 | rs6963574 | C | T | rs6963574 | pha002859 | 3.99E-05 | phs000021 | 1.79 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | MKLN1 | intron | NM_001145354 |
| 7 | 132835204 | rs41519445 | T | G | rs41519445 | 19571809 | 7.48E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 132966299 | rs13242614 | T | C | rs13242614 | 19571809 | 6.81E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 7 | 134696880 | rs4415249 | C | A | rs4415249 | 21926974 | 4.18E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 136965864 | rs1880791 | G | T | rs1880791 | 21674006 | 5.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PTN |
| 7 | 137081223 | rs1451526 | A | G | rs1451526 | 19197363 | 4.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 137081223 | rs1451526 | A | G | rs1451526 | 19571808 | 8.80E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 138577911 | rs10270572 | T | G | rs10270572 | 20832056 | 1.87E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | KIAA1549 |
| 7 | 139506580 | rs10277664 | C | T | rs10277664 | 24086445 | 1.00E-07 | hOC3vL,Typed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TBXAS1 |
| 7 | 139515216 | rs10233386 | T | C | rs10233386 | 24086445 | 8.01E-07 | hOC3vL,Imputed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | TBXAS1 |
| 7 | 139518205 | rs1107952 | C | T | rs1107952 | 24086445 | 8.04E-07 | hOC3vL,Typed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TBXAS1 |
| 7 | 139939203 | rs17161443 | T | C | rs17161443 | 20889312 | 6.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 141717225 | rs1880924 | C | T | rs1880924 | 20889312 | 4.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 142228586 | rs7798099 | C | T | rs7798099 | 19197363 | 1.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 7 | 142250680 | rs361440 | G | A | rs361440 | 19197363 | 2.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 144098992 | rs727714 | G | A | rs727714 | 19850283 | 2.96E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 7 | 145951642 | rs802524 | T | C | rs802524 | 20889312 | 7.00E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 145959243 | rs802568 | T | G | rs802568 | 20889312 | 2.00E-07 | NA | 2.03 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 146046444 | rs965003 | C | T | rs965003 | 20889312 | 9.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 146048830 | rs7799181 | A | G | rs7799181 | 20889312 | 2.00E-06 | NA | 2.26 | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 152272282 | rs4726177 | T | C | rs4726177 | 19197363 | 4.28E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 154946061 | rs1730202 | G | T | rs1730202 | 22648509 | 7.27E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 7 | 154966534 | rs10246702 | G | A | rs10246702 | 22648509 | 9.05E-06 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 7 | 154970469 | rs10263087 | G | C | rs10263087 | 22648509 | 7.00E-06 | NA | 1.55 | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | rs10263087-C | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 7 | 155052274 | rs12719705 | A | G | rs12719705 | 20889312 | 8.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 156048649 | rs10949808 | T | G | rs10949808 | 20889312 | 1.00E-07 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 156056343 | rs12386611 | G | A | rs12386611 | 20889312 | 1.76E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 156062719 | rs10216266 | G | A | rs10216266 | 20889312 | 1.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 156593270 | rs6945929 | A | G | rs6945929 | 24253340 | 8.74E-05 | NA | 1.25 | [1.11-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 156679832 | rs11765003 | T | C | rs11765003 | 24253340 | 6.99E-05 | NA | 1.25 | [1.11-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 7 | 156722649 | rs11980132 | G | A | rs11980132 | 24253340 | 9.32E-05 | NA | 1.31 | [1.13-1.51] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 157429866 | rs1263572 | C | A | rs1263572 | 19197363 | 8.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 7 | 157510195 | rs6459804 | C | T | rs6459804 | 21057379 | 8.00E-06 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 7 | 157868374 | rs10232468 | T | C | rs10232468 | 20889312 | 3.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 2028573 | rs6558599 | G | C | rs6558599 | 20889312 | 6.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 2040104 | rs2235121 | C | T | rs2235121 | 20889312 | 8.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 2513884 | rs9314462 | T | C | rs9314462 | 22479419 | 9.09E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 8 | 2802745 | rs584541 | T | C | rs584541 | 23358160 | 4.90E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 3170594 | rs10503201 | A | G | rs10503201 | 19197363 | 2.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 3508977 | rs1586030 | A | G | rs1586030 | 19197363 | 7.07E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 3516836 | rs10503214 | T | C | rs10503214 | 19197363 | 4.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 3586818 | rs17067182 | G | A | rs17067182 | 21926974 | 3.95E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 3636371 | rs2623659 | T | C | rs2623659 | 20832056 | 3.97E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | CSMD1 |
| 8 | 4121989 | rs17069782 | A | G | rs17069782 | 20889312 | 1.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 4180844 | rs10503253 | C | A | rs10503253 | 21926974 | 2.00E-08 | NA | 1.16 | [1.11-1.21] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs10503253-A | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 4214179 | rs10503256 | A | G | rs10503256 | 21926974 | 1.97E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 4214179 | rs10503256 | A | G | rs10503256 | 22688191 | 9.00E-07 | NA | 1.1 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 4287134 | rs7015706 | A | G | rs7015706 | 19197363 | 5.65E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 4341641 | rs1725111 | G | A | rs1725111 | 19197363 | 7.17E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 4467334 | rs2725045 | G | T | rs2725045 | 19571809 | 4.45E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 4467853 | rs2725046 | A | G | rs2725046 | 19571809 | 3.88E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 5593343 | rs859815 | G | T | rs859815 | 24253340 | 3.48E-05 | NA | 1.27 | [1.12-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 6420574 | rs3739392 | A | G | rs3739392 | 19571809 | 5.47E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 6555558 | rs11137056 | G | C | rs11137056 | 20832056 | 1.81E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 8 | 6715719 | rs2980946 | A | C | rs2980946 | 22883433 | 7.57E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 8534774 | rs11249877 | T | C | rs11249877 | 19197363 | 3.82E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 8635515 | rs500115 | T | C | rs500115 | 21926974 | 5.78E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 9178921 | rs12543276 | G | A | rs12543276 | 23637625 | 0.000138 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 9237708 | rs12234997 | A | G | rs12234997 | 21926974 | 3.06E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 9986655 | rs1484642 | G | C | rs1484642 | 22688191 | 3.00E-06 | NA | 1.43 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 10022938 | rs7017212 | G | T | rs7017212 | 21679298 | 4.00E-06 | NA | NA | NA | 98 Chinese ancestry cases; 60 Chinese ancestry controls | Chinese(158) | ALL(158) | ASN(158) | ALL(158) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | MSRA |
| 8 | 10175137 | rs7835507 | C | A | rs7835507 | 19197363 | 3.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 10176363 | rs6997224 | T | C | rs6997224 | 19197363 | 6.06E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 10207943 | rs6601443 | G | A | rs6601443 | 19197363 | 8.16E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 10253537 | rs17151903 | A | G | rs17151903 | 21688384 | 2.66E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | MSRA |
| 8 | 10482372 | rs9329228 | C | A | rs9329228 | 19197363 | 3.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 11223022 | rs2736280 | C | A | rs2736280 | 19197363 | 6.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 11859851 | rs12550733 | C | A | rs12550733 | 19197363 | 6.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 12826036 | rs2460915 | T | A | rs2460915 | 19571809 | 2.87E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 13109645 | rs17793145 | C | T | rs17793145 | 21926974 | 7.25E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 13334842 | rs1155204 | C | T | rs1155204 | 24253340 | 5.38E-05 | NA | 1.47 | [1.23-1.77] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 13348868 | rs17094050 | G | T | rs17094050 | 24253340 | 2.73E-06 | NA | 1.83 | [1.43-2.34] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 15008108 | rs10108992 | C | T | rs10108992 | 19197363 | 6.55E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 15054424 | rs12680924 | G | A | rs12680924 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,G |
| 8 | 18663483 | rs2172289 | A | G | rs2172289 | 20889312 | 8.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 18664294 | rs1386688 | C | G | rs1386688 | 19571809 | 6.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 19049811 | rs333047 | T | C | rs333047 | 19197363 | 3.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 19064892 | rs2898487 | C | T | rs2898487 | 19197363 | 4.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 19074872 | rs2672245 | G | T | rs2672245 | 19197363 | 6.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 19415503 | rs10503649 | A | T | rs10503649 | 21674006 | 5.95E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | CSGALNACT1 |
| 8 | 19842188 | rs7825274 | G | C | rs7825274 | 19571809 | 2.79E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 19842188 | rs7825274 | G | C | rs7825274 | pha002859 | 2.62E-05 | phs000021 | 1.54 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 8 | 20066049 | rs1106634 | G | A | rs1106634 | 20889312 | 4.00E-06 | NA | 1.34 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 21129059 | rs2631878 | G | A | rs2631878 | 19197363 | 1.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 21130702 | rs2631879 | C | T | rs2631879 | 19197363 | 3.81E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 21285710 | rs7837682 | T | C | rs7837682 | 18521090 | 7.70E-05 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 8 | 21392919 | rs6995069 | G | C | rs6995069 | 20889312 | 1.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 25630398 | rs12547975 | G | A | rs12547975 | 19571809 | 4.14E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 25633531 | rs1035722 | C | T | rs1035722 | 19197363 | 3.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 26576125 | rs11779314 | C | T | rs11779314 | 19571809 | 4.67E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 27073268 | rs1446684 | A | C | rs1446684 | 22883433 | 8.21E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 27076598 | rs1446682 | T | A | rs1446682 | 20889312 | 6.00E-06 | NA | 1.26 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 27106633 | rs7846477 | C | A | rs7846477 | 20889312 | 3.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 27418429 | rs11776293 | C | T | rs11776293 | 19571809 | 6.48E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 28042187 | rs4732838 | A | G | rs4732838 | 19571809 | 1.68E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 28042187 | rs4732838 | A | G | rs4732838 | pha002859 | 4.66E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | ELP3 | intron | NM_018091 |
| 8 | 28076422 | rs6985192 | T | C | rs6985192 | 19197363 | 7.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 28488086 | rs7009699 | A | C | rs7009699 | 19850283 | 4.02E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 8 | 28633685 | rs241202 | C | G | rs241202 | 19850283 | 3.20E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 8 | 29250546 | rs601962 | T | C | rs601962 | 19571809 | 4.03E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 29250546 | rs601962 | T | C | rs601962 | pha002859 | 5.33E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 8 | 29371007 | rs17462248 | T | G | rs17462248 | 20832056 | 2.06E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 8 | 31448469 | rs13258147 | G | A | rs13258147 | 22883433 | 8.78E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 31947234 | rs10503899 | A | G | rs10503899 | 22440650 | 1.32E-14 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NRG1 |
| 8 | 32415682 | rs6989777 | G | A | rs6989777 | 19571809 | 1.80E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 32415682 | rs6989777 | G | A | rs6989777 | pha002859 | 2.96E-05 | phs000021 | 1.79 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NRG1 | intron | NM_013962 |
| 8 | 32420347 | rs4316112 | C | A | rs4316112 | 19571809 | 1.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 32420347 | rs4316112 | C | A | rs4316112 | pha002859 | 2.73E-05 | phs000021 | 1.79 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NRG1 | intron | NM_013962 |
| 8 | 32425743 | rs4733132 | C | G | rs4733132 | 19571809 | 3.15E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 32425743 | rs4733132 | C | G | rs4733132 | pha002859 | 4.82E-05 | phs000021 | 1.75 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NRG1 | intron | NM_013962 |
| 8 | 32662782 | rs10088561 | C | T | rs10088561 | 22440650 | 0.000337 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 8 | 33997051 | rs2729993 | C | G | rs2729993 | 19571809 | 2.14E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 33997051 | rs2729993 | C | G | rs2729993 | pha002859 | 2.27E-05 | phs000021 | 1.47 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 8 | 34020667 | rs6468235 | C | T | rs6468235 | 19571809 | 2.86E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 34020667 | rs6468235 | C | T | rs6468235 | pha002859 | 3.14E-05 | phs000021 | 1.45 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 8 | 38031345 | rs16887244 | A | G | rs16887244 | 22037555 | 1.00E-10 | NA | 1.19 | [1.14-1.27] | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | LSM1 |
| 8 | 40162609 | rs16889118 | A | G | rs16889118 | 24253340 | 8.47E-05 | NA | 1.49 | [1.22-1.82] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 40176490 | rs16889133 | A | G | rs16889133 | 24253340 | 9.09E-05 | NA | 1.49 | [1.22-1.81] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 41228458 | rs10958680 | C | T | rs10958680 | 22883433 | 9.81E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 41231950 | rs2883471 | C | T | rs2883471 | 22883433 | 2.36E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 8 | 42285336 | rs3888124 | G | C | rs3888124 | 19571809 | 2.97E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 49529028 | rs2384925 | T | C | rs2384925 | 19197363 | 5.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 51130853 | rs16914526 | C | T | rs16914526 | 22440650 | 1.89E-13 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | SNTG1 |
| 8 | 51737729 | rs6473406 | T | C | rs6473406 | 19571809 | 8.43E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 51737729 | rs6473406 | T | C | rs6473406 | pha002859 | 3.88E-05 | phs000021 | 1.34 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 8 | 51764858 | rs6473431 | A | G | rs6473431 | pha002859 | 9.09E-05 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 8 | 51770931 | rs7013653 | A | G | rs7013653 | pha002859 | 3.21E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 8 | 51789319 | rs7016107 | A | T | rs7016107 | pha002859 | 6.32E-05 | phs000021 | 1.31 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 8 | 51805575 | rs10102886 | C | T | rs10102886 | 19571809 | 8.71E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 51805575 | rs10102886 | C | T | rs10102886 | pha002859 | 8.33E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 8 | 54308503 | rs3887558 | A | G | rs3887558 | 20889312 | 8.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 55797674 | rs9643483 | G | T | rs9643483 | 18521090 | 5.50E-05 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 8 | 56036147 | rs16921164 | A | G | rs16921164 | 19571809 | 9.25E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 56036859 | rs16921167 | C | A | rs16921167 | 19571809 | 1.92E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 58840908 | rs1992044 | G | T | rs1992044 | 20889312 | 3.84E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 58840924 | rs1992045 | C | T | rs1992045 | 20889312 | 2.00E-07 | NA | 1.56 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 59805738 | rs6471757 | G | A | rs6471757 | 19197363 | 3.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 61812901 | rs10504321 | C | A | rs10504321 | 19197363 | 4.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 64835981 | rs2162119 | T | C | rs2162119 | 21926974 | 9.75E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 65606916 | rs7002672 | G | A | rs7002672 | 19571809 | 3.85E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 65606916 | rs7002672 | G | A | rs7002672 | pha002859 | 5.04E-05 | phs000021 | 1.41 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | CYP7B1 | intron | NM_004820 |
| 8 | 66470243 | rs16932223 | A | G | rs16932223 | 20185149 | 9.27E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 8 | 67194991 | rs4737773 | G | T | rs4737773 | 19197363 | 7.98E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 69185487 | rs7835997 | T | G | rs7835997 | 21674006 | 4.03E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 8 | 70796305 | rs6472491 | G | C | rs6472491 | 19571809 | 3.28E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 70796305 | rs6472491 | G | C | rs6472491 | pha002859 | 3.15E-05 | phs000021 | 1.69 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 8 | 72245087 | rs4738128 | C | T | rs4738128 | 23358160 | 3.13E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 72991038 | rs2587562 | G | A | rs2587562 | 19571809 | 1.56E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 72991038 | rs2587562 | G | A | rs2587562 | pha002859 | 4.42E-05 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 8 | 75725647 | rs1594758 | A | C | rs1594758 | 22440650 | 0.000598 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 8 | 76555824 | rs7822447 | G | A | rs7822447 | 19197363 | 5.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 80491853 | rs16906925 | G | T | rs16906925 | 20832056 | 2.39E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 8 | 80497148 | rs16906934 | A | G | rs16906934 | 20832056 | 2.25E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 8 | 82069207 | rs11988289 | A | C | rs11988289 | 22883433 | 2.86E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 82691809 | rs7815272 | T | G | rs7815272 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 82737745 | rs1463259 | T | C | rs1463259 | 19197363 | 3.17E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 84075113 | rs2140016 | A | G | rs2140016 | 20832056 | 2.26E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 8 | 84211031 | rs1915806 | C | T | rs1915806 | 20832056 | 3.76E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 8 | 84211465 | rs7005418 | T | C | rs7005418 | 20832056 | 2.65E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 8 | 87652115 | rs6991672 | C | T | rs6991672 | 19197363 | 4.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 89268543 | rs6994019 | T | G | rs6994019 | 21791550 | 1.70E-07 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 8 | 89592083 | rs11995572 | G | T | rs11995572 | 23974872 | 3.00E-08 | NA | 1.12 | [1.08-1.16] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs11995572-T | Research Support, N.I.H., Extramural |
| 8 | 89760311 | rs7004633 | A | G | rs7004633 | 21926974 | 2.00E-07 | NA | 1.11 | [1.07-1.15] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7004633-A | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 89760311 | rs7004633 | A | G | rs7004633 | 22688191 | 6.00E-08 | NA | 1.15 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 89760311 | rs7004633 | A | G | rs7004633 | 23637625 | 0.00000017 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 91018507 | rs16902273 | T | A | rs16902273 | 21926974 | 8.47E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 91033746 | rs1805884 | A | G | rs1805884 | 20889312 | 5.11E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 93284681 | rs17748153 | C | T | rs17748153 | 20832056 | 3.19E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 8 | 94167808 | rs11994496 | T | A | rs11994496 | 20889312 | 3.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 94169350 | rs278567 | T | C | rs278567 | 20889312 | 8.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 94190752 | rs16915713 | G | A | rs16915713 | 20889312 | 2.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 94192043 | rs2197673 | T | A | rs2197673 | 20889312 | 4.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 94193643 | rs10504927 | A | T | rs10504927 | 20889312 | 4.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 94194050 | rs16915724 | G | A | rs16915724 | 20889312 | 2.14E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 96468981 | rs3104917 | A | G | rs3104917 | pha002857 | 2.52E-05 | phs000021 | 1.45 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | LOC100616530 | intron | NR_038201 |
| 8 | 97594103 | rs2319696 | A | C | rs2319696 | 20889312 | 2.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 98476935 | rs9656841 | T | C | rs9656841 | 19571809 | 3.20E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 98485861 | rs10808356 | T | C | rs10808356 | 23358160 | 1.37E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 99373167 | rs6989037 | T | G | rs6989037 | 19197363 | 6.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 102083452 | rs737707 | A | G | rs737707 | 19571809 | 6.23E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 102227923 | rs1264202 | A | C | rs1264202 | 21107309 | 2.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 8 | 103649935 | rs2436964 | T | C | rs2436964 | 19197363 | 2.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,T |
| 8 | 104322803 | rs3107648 | C | G | rs3107648 | 21674006 | 1.99E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | FZD6 |
| 8 | 104323026 | rs827536 | C | A | rs827536 | 21674006 | 8.06E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | FZD6 |
| 8 | 105915256 | rs1545699 | G | A | rs1545699 | 19197363 | 1.28E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 106419828 | rs1383591 | A | G | rs1383591 | 19571809 | 9.38E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 106428022 | rs11988529 | T | C | rs11988529 | 19571809 | 2.17E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 106435981 | rs16873003 | T | C | rs16873003 | 19571809 | 8.78E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 106437978 | rs4734863 | A | G | rs4734863 | 19571809 | 5.82E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 106438580 | rs7823133 | C | T | rs7823133 | 19571809 | 3.66E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 107817846 | rs2449836 | C | A | rs2449836 | 19197363 | 5.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 108409931 | rs1283663 | C | A | rs1283663 | 19197363 | 3.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 108489996 | rs951759 | A | C | rs951759 | 19197363 | 8.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 108543427 | rs281712 | T | G | rs281712 | 19197363 | 6.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 109467962 | rs11774379 | C | T | rs11774379 | pha002859 | 9.01E-05 | phs000021 | 1.39 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | TTC35 | intron | NM_014673 |
| 8 | 110585288 | rs7824177 | A | G | rs7824177 | 19197363 | 5.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 110616994 | rs1892759 | G | A | rs1892759 | 19197363 | 5.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 115098900 | rs6993893 | A | C | rs6993893 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 118319624 | rs7000854 | T | C | rs7000854 | 20889312 | 8.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 121635396 | rs6986718 | C | A | rs6986718 | 20889312 | 9.00E-06 | NA | 1.52 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 122948438 | rs12676697 | T | C | rs12676697 | 22883433 | 9.39E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 125266807 | rs17360690 | G | A | rs17360690 | 19571811 | 6.67E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 8 | 125596256 | rs6470253 | G | A | rs6470253 | 19571808 | 1.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 131469692 | rs868104 | T | C | rs868104 | 19850283 | 1.49E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 8 | 131802718 | rs963215 | G | A | rs963215 | 21674006 | 8.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | ADCY8 |
| 8 | 132473863 | rs715969 | A | C | rs715969 | 19197363 | 2.09E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 134360780 | rs10093875 | A | C | rs10093875 | 24253340 | 6.58E-05 | NA | 1.29 | [1.13-1.46] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 134668677 | rs2860223 | A | G | rs2860223 | 23382809 | 2.00E-06 | NA | 1.26 | NA | 1,774 European ancestry cases; 2,726 European ancestry controls | European(4500) | ALL(4500) | EUR(4500) | ALL(4500) | Schizophrenia (negative symptoms) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs2860223-C | Research Support, N.I.H., Extramural | Meta-Analysis | G,A |
| 8 | 134678117 | rs6981912 | A | G | rs6981912 | 19197363 | 5.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 8 | 135026160 | rs7819815 | A | G | rs7819815 | 21688384 | 3.10E-07 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 8 | 135026266 | rs7820063 | C | T | rs7820063 | 21688384 | 1.13E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 8 | 135570935 | rs9792264 | A | G | rs9792264 | 19850283 | 1.10E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 8 | 138063213 | rs11780624 | C | T | rs11780624 | 19197363 | 3.06E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 138146684 | rs16906788 | G | A | rs16906788 | 19197363 | 2.98E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 139799772 | rs1573833 | A | G | rs1573833 | 19571809 | 8.00E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 142283565 | rs13253108 | G | A | rs13253108 | 20889312 | 5.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142320537 | rs11776290 | A | G | rs11776290 | 20889312 | 7.78E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142342682 | rs11984988 | T | G | rs11984988 | 20889312 | 1.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142358865 | rs4961372 | A | G | rs4961372 | 20889312 | 3.22E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142359262 | rs6578164 | C | T | rs6578164 | 20889312 | 5.43E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142359368 | rs7386745 | T | C | rs7386745 | 20889312 | 1.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142359550 | rs7386474 | A | G | rs7386474 | 20889312 | 3.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142652560 | rs903961 | T | A | rs903961 | 20889312 | 8.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142661456 | rs10088430 | T | C | rs10088430 | 20889312 | 9.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 142704071 | rs1109990 | G | C | rs1109990 | 20889312 | 5.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 143309504 | rs10098073 | C | A | rs10098073 | 21926974 | 5.42E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 8 | 143312933 | rs4129585 | A | C | rs4129585 | 23974872 | 2.00E-10 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4129585-A | Research Support, N.I.H., Extramural |
| 8 | 143675222 | rs7843869 | A | G | rs7843869 | 19197363 | 1.20E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 143682428 | rs7835613 | G | A | rs7835613 | 20889312 | 5.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 143691838 | rs7465272 | T | A | rs7465272 | 19571809 | 9.34E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 8 | 143691838 | rs7465272 | T | A | rs7465272 | 20889312 | 9.00E-06 | NA | 1.26 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 8 | 144231514 | rs4977138 | A | G | rs4977138 | 22883433 | 6.97E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 8 | 144234489 | rs6420183 | C | T | rs6420183 | 22883433 | 4.14E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 8 | 144801681 | rs11778657 | G | A | rs11778657 | 19850283 | 1.45E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 9 | 1683418 | rs535825 | G | C | rs535825 | 19571809 | 9.90E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 2073839 | rs2066111 | C | T | rs2066111 | 22479419 | 8.20E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SMARCA2 |
| 9 | 2076174 | rs3763627 | A | T | rs3763627 | 22479419 | 1.20E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SMARCA2 |
| 9 | 2095958 | rs3793490 | T | G | rs3793490 | 22479419 | 3.00E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SMARCA2 |
| 9 | 2191309 | rs2296212 | C | G | rs2296212 | 22479419 | 5.80E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SMARCA2 |
| 9 | 2289519 | rs7861374 | C | A | rs7861374 | 22883433 | 7.08E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 2299220 | rs10965506 | T | G | rs10965506 | 22883433 | 8.12E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 2300565 | rs13292475 | T | C | rs13292475 | 22883433 | 6.24E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 2301724 | rs13294267 | A | G | rs13294267 | 22883433 | 4.40E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 3060291 | rs10738843 | A | C | rs10738843 | 19571811 | 7.59E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 9 | 3158247 | rs10970384 | A | C | rs10970384 | 21926974 | 1.05E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 3983003 | rs657076 | G | A | rs657076 | 19197363 | 4.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 4743341 | rs12352353 | A | G | rs12352353 | 21926974 | 6.57E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 6163823 | rs10119713 | G | A | rs10119713 | 20185149 | 4.86E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 9 | 6555311 | rs10125618 | A | G | rs10125618 | 19571811 | 2.04E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | GLDC |
| 9 | 6722212 | rs2990659 | G | A | rs2990659 | 20889312 | 3.88E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 6741529 | rs2988414 | G | A | rs2988414 | 20889312 | 4.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 6784726 | rs10815468 | G | C | rs10815468 | 20889312 | 7.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 6784726 | rs10815468 | G | C | rs10815468 | pha002857 | 4.26E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | KDM4C | intron | NM_015061 |
| 9 | 7164061 | rs10815532 | C | T | rs10815532 | 19571811 | 5.38E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | KDM4C |
| 9 | 7226519 | rs10976131 | T | C | rs10976131 | 21926974 | 5.39E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 8578261 | rs10977210 | T | C | rs10977210 | 19197363 | 5.87E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 8585188 | rs7861140 | T | C | rs7861140 | 19197363 | 1.02E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 8682672 | rs10511506 | A | G | rs10511506 | 19197363 | 7.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 8709838 | rs16928304 | A | G | rs16928304 | 22883433 | 6.53E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 10329917 | rs10809068 | A | T | rs10809068 | 20889312 | 2.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 12540169 | rs10960702 | T | A | rs10960702 | 21688384 | 7.85E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 9 | 12698363 | rs2075508 | T | C | rs2075508 | 19197363 | 2.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 13705568 | rs627216 | C | G | rs627216 | 20889312 | 8.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 13725246 | rs10115052 | G | T | rs10115052 | 20889312 | 7.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 14488904 | rs303746 | G | C | rs303746 | pha002859 | 9.39E-05 | phs000021 | 1.76 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 9 | 14493900 | rs13292512 | A | T | rs13292512 | 20889312 | 7.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 14891670 | rs10810285 | C | T | rs10810285 | 22440650 | 0.0000378 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | FREM1 |
| 9 | 15283097 | rs12003180 | C | T | rs12003180 | 20889312 | 5.00E-06 | NA | 1.6 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 15451866 | rs10738397 | A | G | rs10738397 | 19571811 | 5.80E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | SNAPC3 |
| 9 | 19484460 | rs1011131 | C | G | rs1011131 | 20832056 | 2.47E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 9 | 19484869 | rs7858547 | T | C | rs7858547 | 20832056 | 5.33E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 9 | 19527424 | rs10491556 | G | C | rs10491556 | 19571809 | 9.15E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 20176715 | rs4478647 | G | A | rs4478647 | 19197363 | 5.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 20323846 | rs224013 | G | C | rs224013 | 21674006 | 6.82E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 9 | 21033557 | rs10964808 | A | G | rs10964808 | 20889312 | 1.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 21042299 | rs12006112 | T | C | rs12006112 | 20889312 | 3.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 21748320 | rs17833407 | A | G | rs17833407 | 19571809 | 3.02E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 22003367 | rs1063192 | G | A | rs1063192 | 19197363 | 7.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 22033366 | rs2157719 | C | T | rs2157719 | 19197363 | 5.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 23769754 | rs10491817 | A | C | rs10491817 | 21674006 | 8.70E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | ELAVL2 |
| 9 | 25658483 | rs4977681 | T | C | rs4977681 | 19197363 | 2.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 26551726 | rs10757612 | A | C | rs10757612 | 19197363 | 8.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 26675172 | rs12236180 | T | G | rs12236180 | pha002857 | 4.63E-05 | phs000021 | 1.43 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 9 | 26713335 | rs10757623 | T | G | rs10757623 | 20889312 | 2.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 26723522 | rs10967494 | T | C | rs10967494 | 20889312 | 6.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 26844843 | rs7032756 | C | T | rs7032756 | 19571808 | 4.50E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 26860358 | rs7868158 | T | C | rs7868158 | 19571808 | 9.90E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 26915925 | rs7863476 | G | A | rs7863476 | 19571808 | 3.60E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 26915925 | rs7863476 | G | A | rs7863476 | 21791550 | 6.30E-07 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 9 | 26935996 | rs7045881 | A | T | rs7045881 | 20185149 | 2.00E-06 | NA | 1.16 | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 9 | 26935996 | rs7045881 | A | T | rs7045881 | 22479419 | 2.10E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PLAA |
| 9 | 26945976 | rs7035755 | A | G | rs7035755 | 19571808 | 9.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 27018020 | rs12337896 | A | G | rs12337896 | 19571808 | 3.70E-07 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 27041676 | rs10812518 | C | T | rs10812518 | 19571808 | 3.00E-07 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 27723858 | rs2026146 | G | T | rs2026146 | 19197363 | 4.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 28736988 | rs7851298 | C | T | rs7851298 | 19197363 | 2.79E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 32760620 | rs10813874 | C | T | rs10813874 | 21688384 | 4.34E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 9 | 33217266 | rs830407 | G | A | rs830407 | 20889312 | 8.00E-06 | NA | 1.36 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 36307043 | rs10123040 | C | T | rs10123040 | 19571808 | 5.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 36310778 | rs10758368 | T | G | rs10758368 | 19571808 | 2.60E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 36885919 | rs3780143 | C | T | rs3780143 | 20889312 | 7.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 37622777 | rs10973441 | T | C | rs10973441 | 21926974 | 8.17E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 38355790 | rs17444315 | T | C | rs17444315 | 23358160 | 9.91E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 71154607 | rs7861495 | G | C | rs7861495 | 19571809 | 1.17E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 72231647 | rs10746683 | T | C | rs10746683 | 21688384 | 6.77E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | APBA1 |
| 9 | 74072841 | rs7034150 | G | A | rs7034150 | 23358160 | 1.60E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 74096528 | rs11142845 | C | T | rs11142845 | 20889312 | 8.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 74200674 | rs2210016 | G | A | rs2210016 | 19197363 | 2.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 74202802 | rs11142904 | T | C | rs11142904 | 19197363 | 7.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 77991404 | rs1409937 | A | G | rs1409937 | 19197363 | 5.54E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 78028346 | rs489332 | C | T | rs489332 | 23212062 | 6.00E-06 | Mood symptoms | 0.11 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 9 | 78272025 | rs4745430 | C | T | rs4745430 | 19197363 | 8.30E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 78272025 | rs4745430 | C | T | rs4745430 | 19571808 | 3.80E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 78272095 | rs4745431 | T | C | rs4745431 | 19197363 | 3.83E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 78277767 | rs2094588 | T | C | rs2094588 | 19197363 | 3.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 78331051 | rs17663620 | G | A | rs17663620 | 22648509 | 8.19E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 9 | 78851588 | rs1353343 | C | T | rs1353343 | 19197363 | 4.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 78854312 | rs2007744 | T | G | rs2007744 | 19197363 | 1.96E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 79093664 | rs785936 | A | G | rs785936 | 20185149 | 3.00E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 9 | 79264147 | rs526347 | T | C | rs526347 | 20832056 | 3.33E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PRUNE2 |
| 9 | 80997705 | rs2989585 | A | G | rs2989585 | 22883433 | 7.38E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 81346848 | rs12342805 | C | T | rs12342805 | 19197363 | 8.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 81647793 | rs6559443 | C | A | rs6559443 | 19197363 | 5.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 83104621 | rs10081668 | G | T | rs10081668 | 20889312 | 9.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 84892263 | rs10867840 | G | A | rs10867840 | 19571809 | 9.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 84962689 | rs2788110 | A | G | rs2788110 | 19571809 | 4.24E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 84986219 | rs10867844 | A | G | rs10867844 | 19571809 | 5.46E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 86177401 | rs3934902 | G | A | rs3934902 | 19197363 | 6.26E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 87795894 | rs12348509 | T | C | rs12348509 | 20889312 | 5.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 89966967 | rs11791306 | G | C | rs11791306 | 20889312 | 1.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 89991700 | rs17052797 | G | C | rs17052797 | 20889312 | 3.77E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 90009393 | rs4427250 | A | G | rs4427250 | 20889312 | 1.15E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 90031669 | rs1806864 | G | C | rs1806864 | 20889312 | 1.00E-06 | NA | 1.44 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 93539879 | rs291007 | A | G | rs291007 | 19197363 | 1.89E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 93573542 | rs290240 | G | A | rs290240 | 19197363 | 6.02E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 93574650 | rs290237 | C | T | rs290237 | 19197363 | 1.83E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 94822540 | rs7872515 | G | A | rs7872515 | 22688191 | 6.00E-07 | NA | 1.39 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 95442033 | rs912261 | T | C | rs912261 | 23358160 | 4.67E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 95542654 | rs12236788 | G | A | rs12236788 | 23358160 | 8.18E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 95688099 | rs10992535 | T | G | rs10992535 | 19197363 | 2.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 96393807 | rs12238738 | A | G | rs12238738 | 22648509 | 2.08E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 9 | 96395801 | rs2001589 | G | A | rs2001589 | 22648509 | 4.14E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 9 | 96414935 | rs10821191 | T | C | rs10821191 | 22648509 | 2.13E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 9 | 96443910 | rs7040340 | G | A | rs7040340 | 22648509 | 2.24E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 9 | 96776609 | rs2150624 | T | C | rs2150624 | 19197363 | 3.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 97265947 | rs7860616 | A | G | rs7860616 | 19197363 | 7.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 97443341 | rs4460442 | A | C | rs4460442 | 23358160 | 7.51E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 101277681 | rs2779562 | T | C | rs2779562 | 19571811 | 1.86E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | GABBR2 |
| 9 | 105726998 | rs2417407 | G | A | rs2417407 | 20889312 | 3.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 105734010 | rs10990401 | T | C | rs10990401 | 20889312 | 8.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 105746701 | rs1934995 | A | G | rs1934995 | 20889312 | 1.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 107581749 | rs2254884 | A | C | rs2254884 | 23637625 | 0.000117 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 107598740 | rs2065412 | C | T | rs2065412 | 22037552 | 4.74E-05 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ABCA1 |
| 9 | 108642814 | rs10978329 | G | A | rs10978329 | 20889312 | 9.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 108683600 | rs10816353 | A | G | rs10816353 | 20889312 | 7.20E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 108683600 | rs10816353 | A | G | rs10816353 | pha002857 | 3.44E-05 | phs000021 | 1.69 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 9 | 111387353 | rs10979414 | G | A | rs10979414 | pha002859 | 3.67E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 9 | 111628667 | rs12351317 | C | T | rs12351317 | 22440650 | 0.000219 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 9 | 111644396 | rs2275495 | G | A | rs2275495 | 22440650 | 0.000391 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | IKBKAP |
| 9 | 111647581 | rs10816756 | A | C | rs10816756 | 22440650 | 0.000514 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | IKBKAP |
| 9 | 111668652 | rs838827 | C | T | rs838827 | 22440650 | 0.000568 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | IKBKAP |
| 9 | 111754288 | rs838836 | T | C | rs838836 | 22440650 | 0.000543 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | CTNNAL1 |
| 9 | 111786448 | rs10115972 | A | G | rs10115972 | 22440650 | 0.000568 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | TMEM245 |
| 9 | 111799563 | rs643410 | A | C | rs643410 | 23382809 | 1.00E-06 | NA | 1.6 | NA | 1,774 European ancestry cases; 2,726 European ancestry controls | European(4500) | ALL(4500) | EUR(4500) | ALL(4500) | Schizophrenia (negative symptoms) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs643410-A | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 9 | 111936128 | rs7858727 | C | A | rs7858727 | 22883433 | 1.85E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 111938125 | rs10119402 | G | T | rs10119402 | 22883433 | 1.32E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 111945049 | rs3750450 | T | G | rs3750450 | 22883433 | 8.97E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 111958345 | rs6415807 | G | A | rs6415807 | 22883433 | 1.31E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 111973020 | rs7858370 | G | A | rs7858370 | 22440650 | 0.000262 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | EPB41L4B |
| 9 | 112378977 | rs7863484 | C | G | rs7863484 | 20889312 | 9.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 113485961 | rs4336672 | A | C | rs4336672 | 19197363 | 3.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 113503776 | rs4532674 | C | T | rs4532674 | 19197363 | 5.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 113560468 | rs523299 | T | C | rs523299 | 19850283 | 1.28E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 9 | 115397206 | rs11789059 | C | T | rs11789059 | 21688384 | 5.16E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | KIAA1958 |
| 9 | 116822650 | rs2269454 | T | C | rs2269454 | 24043878 | 4.12E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2269454-C | Research Support, Non-U.S. Gov't | A | AMBP |
| 9 | 116957958 | rs4979352 | G | A | rs4979352 | 19197363 | 4.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 117050998 | rs10982134 | G | A | rs10982134 | 19197363 | 7.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 117053215 | rs1249738 | A | G | rs1249738 | 19197363 | 6.07E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 117229400 | rs1535971 | T | G | rs1535971 | 21747397 | 5.53E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 118992381 | rs756624 | C | T | rs756624 | 19571811 | 5.66E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C,T | PAPPA |
| 9 | 119630787 | rs1359703 | A | T | rs1359703 | 19571809 | 7.11E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 119677554 | rs11788987 | G | A | rs11788987 | 20889312 | 6.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 119679456 | rs11792136 | T | C | rs11792136 | 20889312 | 4.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 119774374 | rs6478269 | G | A | rs6478269 | 19197363 | 3.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 121327323 | rs1335258 | C | A | rs1335258 | 20889312 | 1.06E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121327323 | rs1335258 | C | A | rs1335258 | pha002857 | 1.77E-05 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 9 | 121332922 | rs7874294 | T | G | rs7874294 | 20889312 | 7.37E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121346417 | rs1572299 | T | C | rs1572299 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 121346417 | rs1572299 | T | C | rs1572299 | 19571808 | 4.00E-06 | NA | 1.08 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1572299-A | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 9 | 121346417 | rs1572299 | T | C | rs1572299 | 21791550 | 3.10E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 9 | 121355679 | rs10984107 | G | A | rs10984107 | 20889312 | 3.40E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121359286 | rs11789399 | G | A | rs11789399 | 20889312 | 6.00E-09 | NA | 1.29 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121359286 | rs11789399 | G | A | rs11789399 | pha002857 | 1.60E-06 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 9 | 121359546 | rs11789407 | C | A | rs11789407 | 20889312 | 1.55E-08 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121359546 | rs11789407 | C | A | rs11789407 | pha002857 | 2.17E-06 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 9 | 121359692 | rs1414097 | T | C | rs1414097 | 20889312 | 9.11E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121363428 | rs10759986 | A | C | rs10759986 | 20889312 | 2.26E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121363428 | rs10759986 | A | C | rs10759986 | pha002857 | 2.89E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 9 | 121364057 | rs10733631 | A | C | rs10733631 | 20889312 | 2.25E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121364057 | rs10733631 | A | C | rs10733631 | pha002857 | 2.07E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 9 | 121364134 | rs10759987 | A | C | rs10759987 | 20889312 | 4.95E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121364134 | rs10759987 | A | C | rs10759987 | pha002857 | 3.57E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 9 | 121364803 | rs7866602 | A | C | rs7866602 | 20889312 | 7.80E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 121364803 | rs7866602 | A | C | rs7866602 | pha002857 | 5.24E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 9 | 121539628 | rs17466586 | C | T | rs17466586 | 20889312 | 1.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 124098535 | rs767770 | C | T | rs767770 | 20889312 | 6.00E-06 | NA | 1.72 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 124685499 | rs13295747 | C | T | rs13295747 | 22037555 | 4.90E-09 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TTLL11 |
| 9 | 128521473 | rs11999260 | C | T | rs11999260 | 19197363 | 6.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 128546359 | rs12341976 | G | T | rs12341976 | 19197363 | 8.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 128629488 | rs4838298 | C | T | rs4838298 | 19197363 | 4.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 128673226 | rs10513454 | T | G | rs10513454 | 19197363 | 3.45E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 9 | 129129505 | rs2041544 | T | C | rs2041544 | 21747397 | 2.59E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 129197516 | rs887656 | T | C | rs887656 | 19197363 | 6.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 131193665 | rs1009850 | A | C | rs1009850 | 20889312 | 7.55E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 131193665 | rs1009850 | A | C | rs1009850 | pha002857 | 5.21E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | CERCAM | intron | NM_016174 |
| 9 | 132546316 | rs7873555 | C | T | rs7873555 | 19197363 | 3.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 9 | 133877304 | rs11244239 | G | A | rs11244239 | 20889312 | 9.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 9 | 134348723 | rs12553392 | G | A | rs12553392 | 21926974 | 7.59E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 9 | 134645218 | rs2031872 | T | C | rs2031872 | 20832056 | 2.84E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 9 | 135533884 | rs17149424 | A | C | rs17149424 | 19571809 | 8.00E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 135533884 | rs17149424 | A | C | rs17149424 | pha002859 | 3.64E-05 | phs000021 | 1.63 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | DDX31 | intron | NM_022779 |
| 9 | 135556807 | rs17149524 | A | G | rs17149524 | 19571809 | 9.59E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 9 | 135556807 | rs17149524 | A | G | rs17149524 | pha002859 | 4.12E-05 | phs000021 | 1.6 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | GTF3C4 | intron | NM_012204 |
| 9 | 138816346 | rs884072 | C | T | rs884072 | 19197363 | 6.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 1139183 | rs10159718 | A | G | rs10159718 | 23358160 | 6.18E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 2131363 | rs12242400 | T | A | rs12242400 | 22648509 | 2.86E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 10 | 2610523 | rs10903809 | G | A | rs10903809 | 20889312 | 1.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 2993411 | rs12359642 | G | C | rs12359642 | 20889312 | 3.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 4624233 | rs109882 | T | C | rs109882 | 19197363 | 1.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 4672037 | rs11252631 | G | A | rs11252631 | 20185149 | 3.25E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 10 | 6389605 | rs947470 | A | G | rs947470 | 19197363 | 8.05E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 6389672 | rs947471 | T | C | rs947471 | 19197363 | 8.05E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 6407737 | rs11258317 | G | A | rs11258317 | 20889312 | 6.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 6407737 | rs11258317 | G | A | rs11258317 | pha002857 | 5.61E-06 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 10 | 6946263 | rs6602217 | T | C | rs6602217 | 21926974 | 4.58E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 6946263 | rs6602217 | T | C | rs6602217 | 23637625 | 0.0000229 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 8331078 | rs4749728 | G | T | rs4749728 | 19197363 | 2.82E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 8378782 | rs10508350 | C | T | rs10508350 | 24253340 | 9.22E-06 | NA | 1.34 | [1.18-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 9963634 | rs10508381 | A | G | rs10508381 | 19197363 | 8.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 10134319 | rs2657513 | C | A | rs2657513 | 20889312 | 4.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 12544852 | rs11257835 | G | A | rs11257835 | 20889312 | 2.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 14514061 | rs11259131 | T | G | rs11259131 | 20889312 | 8.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 14619045 | rs10906701 | T | C | rs10906701 | 20889312 | 7.11E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 14630069 | rs11259207 | G | A | rs11259207 | 20889312 | 6.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 18388434 | rs10508558 | A | C | rs10508558 | 20889312 | 9.00E-06 | NA | 1.54 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 18680935 | rs10828623 | T | C | rs10828623 | 23358160 | 1.29E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 18716145 | rs10741058 | T | C | rs10741058 | 23358160 | 3.50E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 18734528 | rs17691888 | G | A | rs17691888 | 23974872 | 1.00E-10 | NA | 1.16 | [1.11-1.21] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs17691888-G | Research Support, N.I.H., Extramural |
| 10 | 21567565 | rs3847375 | C | A | rs3847375 | 22885689 | 1.00E-06 | EA | 1.46 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 26001670 | rs11014702 | T | C | rs11014702 | 20889312 | 3.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 26007962 | rs2504192 | A | T | rs2504192 | 20889312 | 4.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 27085246 | rs4463751 | T | C | rs4463751 | 20832056 | 5.06E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ABI1 |
| 10 | 29316537 | rs2887372 | A | G | rs2887372 | 23358160 | 3.88E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 30212755 | rs2776632 | A | G | rs2776632 | 19571811 | 5.85E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 10 | 31528802 | rs3123688 | T | G | rs3123688 | 23358160 | 9.05E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 31916689 | rs4313476 | T | C | rs4313476 | 20185149 | 3.63E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 10 | 32531607 | rs2031791 | T | C | rs2031791 | 19197363 | 1.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 32568388 | rs2986928 | T | C | rs2986928 | 19197363 | 3.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 33264032 | rs1187102 | C | G | rs1187102 | 19571811 | 1.64E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 10 | 33885610 | rs11009462 | C | T | rs11009462 | 19197363 | 4.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 34088053 | rs1412115 | T | C | rs1412115 | 21682944 | 6.00E-06 | NA | NA | NA | 331 Jewish-Israeli family members | Jewish-Israeli(331) | ALL(331) | MEA(331) | ALL(331) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 10 | 34150821 | rs41441548 | G | A | rs41441548 | 21926974 | 2.66E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 34266223 | rs224714 | G | A | rs224714 | 24253340 | 8.01E-05 | NA | 1.28 | [1.13-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,G |
| 10 | 34275113 | rs10827318 | C | T | rs10827318 | 24253340 | 8.64E-05 | NA | 1.27 | [1.12-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 34974831 | rs2985303 | T | A | rs2985303 | 20832056 | 4.70E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PARD3 |
| 10 | 36283073 | rs16936504 | C | T | rs16936504 | 20889312 | 1.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 36283073 | rs16936504 | C | T | rs16936504 | pha002857 | 2.56E-05 | phs000021 | 1.59 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 10 | 43143078 | rs158391 | T | G | rs158391 | 23358160 | 9.92E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 44827197 | rs10900020 | A | T | rs10900020 | 23212062 | 3.00E-06 | Positive symptoms | 0.15 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 10 | 45061109 | rs10047393 | G | A | rs10047393 | 20889312 | 9.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45071890 | rs7083920 | C | T | rs7083920 | 20889312 | 7.84E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45073383 | rs10900075 | T | C | rs10900075 | 20889312 | 9.21E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45078170 | rs11239157 | C | T | rs11239157 | 20889312 | 5.18E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45081394 | rs1999774 | T | A | rs1999774 | 20889312 | 3.15E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45081692 | rs17487074 | C | A | rs17487074 | 20889312 | 6.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45103728 | rs10900077 | G | A | rs10900077 | 20889312 | 6.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45104415 | rs7069381 | G | T | rs7069381 | 20889312 | 4.04E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45117466 | rs1904837 | G | A | rs1904837 | 20889312 | 2.79E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45123379 | rs11239177 | T | C | rs11239177 | 20889312 | 3.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 45126887 | rs1002589 | T | C | rs1002589 | 20889312 | 3.13E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 49918427 | rs1871608 | C | T | rs1871608 | 20832056 | 3.58E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | WDFY4 |
| 10 | 49920031 | rs10776638 | T | A | rs10776638 | 20832056 | 4.67E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | WDFY4 |
| 10 | 49920608 | rs1904601 | G | T | rs1904601 | 20832056 | 2.89E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | WDFY4 |
| 10 | 50025604 | rs12264297 | C | T | rs12264297 | 19197363 | 3.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 50109223 | rs3849150 | C | T | rs3849150 | 19197363 | 5.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 58966671 | rs2055552 | G | A | rs2055552 | 20832056 | 1.56E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 10 | 58995294 | rs3907688 | A | G | rs3907688 | 20832056 | 1.56E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 10 | 59005472 | rs7917615 | A | G | rs7917615 | 20832056 | 1.69E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 10 | 60695295 | rs11006313 | T | A | rs11006313 | 20889312 | 4.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 60705156 | rs10763591 | G | A | rs10763591 | 20889312 | 4.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 60711247 | rs3910877 | G | A | rs3910877 | 20889312 | 3.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 60711341 | rs3910876 | C | T | rs3910876 | 20889312 | 1.15E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 60712592 | rs12252934 | T | C | rs12252934 | 20889312 | 5.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 60712676 | rs7089764 | G | C | rs7089764 | 20889312 | 4.46E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 61148750 | rs11006468 | G | A | rs11006468 | 20889312 | 6.59E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 61380753 | rs2126771 | T | C | rs2126771 | 21674006 | 1.56E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 10 | 61749766 | rs10821633 | G | A | rs10821633 | 19197363 | 8.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 62041591 | rs10821709 | T | C | rs10821709 | 19197363 | 8.92E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62085337 | rs10761482 | T | C | rs10761482 | 20185149 | 8.00E-06 | NA | 1.16 | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 10 | 62085337 | rs10761482 | T | C | rs10761482 | 22479419 | 7.70E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ANK3 |
| 10 | 62106882 | rs7084499 | T | C | rs7084499 | 23637625 | 0.000174 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62222107 | rs10994359 | T | C | rs10994359 | 21926974 | 2.45E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62278812 | rs2153522 | G | A | rs2153522 | 23637625 | 0.000792 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62346638 | rs16915157 | C | T | rs16915157 | 21926974 | 5.00E-06 | NA | 1.1 | [1.06-1.14] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62346638 | rs16915157 | C | T | rs16915157 | 22688191 | 7.00E-07 | NA | 1.13 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 62600287 | rs4132554 | A | G | rs4132554 | pha002859 | 7.66E-05 | phs000021 | 1.55 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 10 | 63678484 | rs77968426 | C | T | rs77968426 | 22883433 | 4.35E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 67029555 | rs12573629 | G | T | rs12573629 | 19571809 | 6.30E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 68461866 | rs7893145 | T | C | rs7893145 | 20889312 | 1.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 68490976 | rs10509277 | C | T | rs10509277 | 20889312 | 7.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 68598292 | rs7902091 | C | A | rs7902091 | 23358160 | 7.00E-07 | NA | 5.33 | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | rs7902091-A | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 68922029 | rs10466008 | T | C | rs10466008 | 19197363 | 3.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 68935700 | rs4746673 | A | G | rs4746673 | 19197363 | 4.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 68949597 | rs7091927 | T | C | rs7091927 | 19197363 | 7.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 69960835 | rs10509300 | G | C | rs10509300 | 19571809 | 9.46E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 71373767 | rs931028 | G | A | rs931028 | 20185149 | 5.16E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T,C |
| 10 | 72902027 | rs4620642 | G | C | rs4620642 | 22648509 | 6.05E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 10 | 72908983 | rs12220332 | G | T | rs12220332 | 22648509 | 4.93E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 10 | 72910633 | rs1935154 | C | A | rs1935154 | 22648509 | 6.69E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 10 | 72918300 | rs10509330 | G | A | rs10509330 | 22648509 | 5.21E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 10 | 77927556 | rs11001655 | A | G | rs11001655 | 23358160 | 2.96E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 77991493 | rs12161701 | G | A | rs12161701 | 23358160 | 8.39E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 78108661 | rs12413026 | G | A | rs12413026 | 21688384 | 7.67E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | C10orf11 |
| 10 | 79186259 | rs10824541 | G | C | rs10824541 | 20889312 | 4.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 79335095 | rs2670115 | A | C | rs2670115 | 18282107 | 2.29E-04 | NA | NA | NA | 660 cases; 2,271 controls | NOPOP(2931) | ALL(2931) | NOPOP(2931) | ALL(2931) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Comparative Study | T |
| 10 | 80501859 | rs35648 | C | T | rs35648 | 19571809 | 9.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 80501859 | rs35648 | C | T | rs35648 | pha002857 | 3.27E-05 | phs000021 | 1.02 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 10 | 80919442 | rs749821 | G | T | rs749821 | 22440650 | 0.000436 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | ZMIZ1 |
| 10 | 80920370 | rs4980038 | A | G | rs4980038 | 22440650 | 0.000436 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | ZMIZ1 |
| 10 | 81685270 | rs7911085 | G | A | rs7911085 | 20889312 | 4.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 81685656 | rs12256689 | C | T | rs12256689 | 20889312 | 7.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 83689509 | rs12241007 | C | G | rs12241007 | 20889312 | 4.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 83819125 | rs4933824 | T | G | rs4933824 | 18521091 | 2.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs4933824-T | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 10 | 85618324 | rs1113145 | T | C | rs1113145 | 19571811 | 3.00E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 10 | 87409973 | rs11201716 | G | C | rs11201716 | 19571811 | 1.88E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | GRID1 |
| 10 | 89070745 | rs41324346 | C | T | rs41324346 | 19571809 | 5.66E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 89384666 | rs12570629 | C | T | rs12570629 | pha002859 | 9.12E-05 | phs000021 | 1.47 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 10 | 90047709 | rs2162361 | C | T | rs2162361 | 19571809 | 9.19E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 90047709 | rs2162361 | C | T | rs2162361 | pha002859 | 4.54E-06 | phs000021 | 2.11 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | RNLS | intron | NM_001031709 |
| 10 | 90211164 | rs10749590 | C | T | rs10749590 | 20832056 | 5.09E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | RNLS |
| 10 | 90985948 | rs2254747 | C | T | rs2254747 | 22883433 | 6.35E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 90987564 | rs2071510 | T | G | rs2071510 | 19197363 | 6.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 92832246 | rs4528226 | G | T | rs4528226 | 18521090 | 1.10E-07 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 10 | 93766315 | rs11186792 | C | A | rs11186792 | 19571809 | 8.57E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 93766315 | rs11186792 | C | A | rs11186792 | pha002859 | 6.28E-05 | phs000021 | 1.59 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | BTAF1 | intron | NM_003972 |
| 10 | 94902664 | rs4918446 | A | C,G | rs4918446 | 19197363 | 5.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 96700537 | rs2253635 | C | T | rs2253635 | 21926974 | 7.36E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 97748040 | rs7900838 | G | A | rs7900838 | 19571809 | 5.46E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97843348 | rs7084542 | A | G | rs7084542 | 19571809 | 6.69E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97870781 | rs1172943 | A | G | rs1172943 | 19571809 | 2.41E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97897991 | rs1177749 | G | A | rs1177749 | 19571809 | 1.29E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97913378 | rs3762090 | A | G | rs3762090 | 19571809 | 4.36E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97915182 | rs11188634 | C | T | rs11188634 | 19571809 | 1.32E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97947937 | rs11188655 | A | G | rs11188655 | 19571809 | 5.47E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 97948589 | rs10882742 | T | G | rs10882742 | 19571809 | 3.78E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 99167255 | rs7895695 | G | A | rs7895695 | 23637625 | 0.0000357 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 100242039 | rs10748732 | T | C | rs10748732 | 22440650 | 0.000147 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | HPSE2 |
| 10 | 101150256 | rs3793931 | A | G | rs3793931 | 19850283 | 4.38E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 10 | 104628873 | rs7085104 | A | G | rs7085104 | 23974872 | 4.00E-13 | NA | 1.11 | [1.08-1.14] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7085104-A | Research Support, N.I.H., Extramural |
| 10 | 104661484 | rs1046778 | T | C | rs1046778 | 21791550 | 6.00E-07 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 10 | 104662458 | rs7897654 | T | C | rs7897654 | 23894747 | 3.00E-07 | NA | 1.2 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7897654-T | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 10 | 104755431 | rs10883817 | G | A | rs10883817 | 23637625 | 0.0000113 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 10 | 104775908 | rs7914558 | G | A | rs7914558 | 21926974 | 2.00E-08 | NA | 1.22 | [1.15-1.29] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7914558-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 10 | 104906211 | rs11191580 | T | C | rs11191580 | 21926974 | 3.00E-08 | NA | 1.2 | [1.13-1.26] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs11191580-T | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 104906211 | rs11191580 | T | C | rs11191580 | 22688191 | 2.00E-09 | NA | 1.23 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 104906211 | rs11191580 | T | C | rs11191580 | 23637625 | 0.00000171 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 105331761 | rs11191732 | G | A | rs11191732 | 21926974 | 2.26E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 105847342 | rs942410 | C | T | rs942410 | 19571809 | 7.24E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 108014282 | rs962392 | C | T | rs962392 | 22648509 | 5.31E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 10 | 108016370 | rs12773693 | G | A | rs12773693 | 22648509 | 9.96E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 10 | 108718454 | rs11193130 | C | T | rs11193130 | 20832056 | 3.52E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SORCS1 |
| 10 | 110337386 | rs1888902 | G | A | rs1888902 | 19197363 | 5.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 110404272 | rs12767064 | G | T | rs12767064 | 19197363 | 5.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 111485427 | rs11194826 | G | C | rs11194826 | 20832056 | 3.49E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 10 | 111898217 | rs6584971 | T | G | rs6584971 | 20889312 | 8.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 112427507 | rs7082097 | A | G | rs7082097 | 22440650 | 0.000501 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | RBM20 |
| 10 | 113194673 | rs4342958 | G | T | rs4342958 | pha002859 | 7.51E-05 | phs000021 | 1.54 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 10 | 115016408 | rs12257761 | C | T | rs12257761 | 19571809 | 7.25E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 10 | 117920341 | rs10510015 | T | C | rs10510015 | 20889312 | 3.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 119181871 | rs181500 | G | T | rs181500 | 22688191 | 5.00E-06 | NA | 1.24 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 121408071 | rs196290 | T | C | rs196290 | 19850283 | 2.81E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 10 | 121931822 | rs3901860 | A | G | rs3901860 | 19197363 | 3.68E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 10 | 122395310 | rs7068008 | A | G | rs7068008 | 20889312 | 9.91E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 122501487 | rs3011399 | T | C | rs3011399 | 21674006 | 1.62E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 10 | 122582613 | rs1254152 | G | A | rs1254152 | 23805179 | 4.80E-06 | NA | 307.9 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs1254152-G | JOURNAL ARTICLE |
| 10 | 124575373 | rs7895725 | T | C | rs7895725 | 19197363 | 8.22E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 126070149 | rs12218361 | A | G | rs12218361 | 20832056 | 6.15E-06 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 10 | 126073849 | rs870209 | C | T | rs870209 | 22883433 | 7.57E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 126587373 | rs7086128 | A | G | rs7086128 | 20889312 | 4.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 127288290 | rs17153249 | C | T | rs17153249 | 21926974 | 9.03E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 10 | 128307192 | rs1025641 | T | C | rs1025641 | 21926974 | 8.28E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 10 | 130635614 | rs3940168 | G | A | rs3940168 | 20889312 | 5.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 10 | 132423915 | rs1177844 | T | C | rs1177844 | 18282107 | 2.48E-04 | NA | NA | NA | 660 cases; 2,271 controls | NOPOP(2931) | ALL(2931) | NOPOP(2931) | ALL(2931) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Comparative Study | G |
| 10 | 132891026 | rs7088377 | A | G | rs7088377 | 19850283 | 1.62E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 10 | 135146714 | rs11101694 | T | C | rs11101694 | 19197363 | 3.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 946070 | rs10794350 | A | G | rs10794350 | 19197363 | 7.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 1027811 | rs7481521 | C | T | rs7481521 | 19197363 | 5.52E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 2323528 | rs2074021 | T | C | rs2074021 | 19197363 | 5.02E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 3948894 | rs750525 | G | A | rs750525 | 22440650 | 0.000748 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | STIM1 |
| 11 | 3957766 | rs10835333 | A | G | rs10835333 | 22440650 | 0.000479 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | STIM1 |
| 11 | 3981488 | rs10835390 | A | G | rs10835390 | 22440650 | 0.000523 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G,A | STIM1 |
| 11 | 6324678 | rs2344350 | T | C | rs2344350 | 19197363 | 5.28E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 7662732 | rs4643071 | C | T | rs4643071 | 19850283 | 3.86E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 11 | 8212769 | rs7112519 | G | A | rs7112519 | 19850283 | 4.27E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 11 | 10463108 | rs7119498 | T | C | rs7119498 | 19197363 | 7.59E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 10581217 | rs17403795 | G | A | rs17403795 | 19571811 | 1.22E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | LYVE1 |
| 11 | 10705420 | rs10743145 | A | G | rs10743145 | 20889312 | 5.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10711321 | rs6484465 | G | A | rs6484465 | 20889312 | 6.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10717812 | rs10770137 | G | A | rs10770137 | 20889312 | 2.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10737001 | rs10840478 | T | G | rs10840478 | 20889312 | 9.48E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10739243 | rs753002 | A | G | rs753002 | 20889312 | 1.06E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10740366 | rs2018368 | C | G | rs2018368 | 20889312 | 1.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10740549 | rs10840479 | G | A | rs10840479 | 20889312 | 4.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 10745394 | rs11042937 | G | T | rs11042937 | 20889312 | 2.00E-06 | NA | 1.23 | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 11198784 | rs17431107 | C | T | rs17431107 | 20889312 | 7.69E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 11205054 | rs2722773 | T | C | rs2722773 | 20889312 | 6.44E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 11205281 | rs2655084 | G | A | rs2655084 | 20889312 | 3.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 11215592 | rs4910274 | A | T | rs4910274 | 20889312 | 5.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 11779374 | rs874651 | C | T | rs874651 | 19197363 | 7.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 11802361 | rs1378357 | A | G | rs1378357 | 19197363 | 5.81E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 12490545 | rs1991320 | C | T | rs1991320 | 19197363 | 7.13E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 12909146 | rs4757064 | A | G | rs4757064 | 20185149 | 9.66E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 11 | 13331226 | rs4757144 | G | A | rs4757144 | 23358160 | 5.00E-06 | NA | 1.15 | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4757144-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 14048480 | rs10832164 | C | T | rs10832164 | 20889312 | 5.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 14064392 | rs11023059 | A | G | rs11023059 | 20889312 | 6.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 14066549 | rs10832170 | A | T | rs10832170 | 20889312 | 3.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 14070828 | rs1528640 | A | G | rs1528640 | 20889312 | 6.14E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 14077511 | rs1406356 | T | A | rs1406356 | 20889312 | 5.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 14078151 | rs2049724 | A | G | rs2049724 | 20889312 | 2.26E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 17160148 | rs4356203 | A | G | rs4356203 | 21926974 | 1.00E-07 | NA | 1.09 | [1.06-1.12] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 17160148 | rs4356203 | A | G | rs4356203 | 23637625 | 0.0000548 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 17160148 | rs4356203 | A | G | rs4356203 | 24280982 | 2.14E-05 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 11 | 17160148 | rs4356203 | A | G | rs4356203 | 24280982 | 6.00E-09 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 11 | 17160148 | rs4356203 | A | G | rs4356203 | 24280982 | 7.36E-05 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 11 | 17176057 | rs7946010 | G | A | rs7946010 | 19197363 | 8.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 17203765 | rs621246 | G | T | rs621246 | 19197363 | 6.07E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 17267029 | rs1488933 | C | T | rs1488933 | 19197363 | 7.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,G |
| 11 | 17291499 | rs214097 | G | T | rs214097 | 19197363 | 1.33E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,A |
| 11 | 17329798 | rs10766383 | G | T | rs10766383 | 19197363 | 1.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 17408025 | rs2285676 | A | G | rs2285676 | 19197363 | 6.50E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 11 | 17424711 | rs2067043 | C | T | rs2067043 | 19197363 | 1.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 17897324 | rs2237930 | A | G | rs2237930 | 19197363 | 8.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 17923676 | rs550460 | A | G | rs550460 | 19197363 | 5.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 17923764 | rs549485 | T | C | rs549485 | 19197363 | 8.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 18265799 | rs12282742 | C | T | rs12282742 | 20889312 | 1.00E-06 | NA | 1.67 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 18276223 | rs11024585 | C | T | rs11024585 | 20889312 | 9.70E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 18903604 | rs7946938 | C | T | rs7946938 | 19571809 | 6.42E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 11 | 22363987 | rs1447513 | G | C | rs1447513 | 21674006 | 6.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | SLC17A6 |
| 11 | 23949292 | rs11826956 | G | A | rs11826956 | 20889312 | 5.02E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 24599878 | rs7131395 | T | C | rs7131395 | 21926974 | 1.58E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 26600371 | rs293983 | C | T | rs293983 | 19571809 | 2.80E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 11 | 26600371 | rs293983 | C | T | rs293983 | pha002859 | 7.79E-05 | phs000021 | 1.41 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | ANO3 | intron | NM_031418 |
| 11 | 29122702 | rs10835482 | C | T | rs10835482 | 22479419 | 1.90E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 11 | 29148890 | rs12366025 | G | A | rs12366025 | 22479419 | 1.00E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 11 | 29158495 | rs1552717 | A | T | rs1552717 | 22479419 | 5.20E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 11 | 29158507 | rs1907605 | G | A | rs1907605 | 22479419 | 5.60E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 11 | 29162136 | rs1602565 | T | C | rs1602565 | 18677311 | 3.00E-06 | 1.16 | NA | 479 cases; 2,937 controls | NOPOP(3416) | ALL(3416) | NOPOP(3416) | ALL(3416) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1602565-C | Meta-Analysis | Research Support, Non-U.S. Gov't | T | |
| 11 | 29162136 | rs1602565 | T | C | rs1602565 | 22479419 | 3.20E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 11 | 29166202 | rs2172225 | A | G | rs2172225 | 22479419 | 2.70E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 11 | 29167468 | rs2958625 | C | A | rs2958625 | 22479419 | 3.50E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 11 | 29171879 | rs10835491 | G | C | rs10835491 | 22479419 | 5.10E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 11 | 29190528 | rs11030597 | A | G | rs11030597 | 22479419 | 1.50E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 11 | 29202440 | rs7938219 | G | A | rs7938219 | 21926974 | 5.73E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 29214412 | rs11030606 | C | T | rs11030606 | 22479419 | 6.80E-04 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 11 | 30378559 | rs1765142 | C | A | rs1765142 | 21791550 | 4.20E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 11 | 33744845 | rs831628 | G | C | rs831628 | 20832056 | 2.60E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | CD59 |
| 11 | 34780278 | rs906902 | G | A | rs906902 | 19197363 | 3.28E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 34780936 | rs10466455 | T | C | rs10466455 | 19197363 | 3.28E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 35176159 | rs187115 | T | C | rs187115 | 21674006 | 6.25E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | CD44 |
| 11 | 35384432 | rs1923298 | T | C | rs1923298 | 19197363 | 3.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 37996978 | rs4313563 | A | G | rs4313563 | 19197363 | 7.11E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 40837713 | rs4611189 | G | A | rs4611189 | 21107309 | 6.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | LRRC4C |
| 11 | 44843134 | rs11038167 | A | C | rs11038167 | 22037552 | 1.00E-11 | NA | 1.29 | [1.23-1.36] | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TSPAN18 |
| 11 | 44855597 | rs11038172 | A | G | rs11038172 | 22037552 | 7.21E-10 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TSPAN18 |
| 11 | 44863818 | rs835784 | A | G | rs835784 | 22037552 | 2.73E-11 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TSPAN18 |
| 11 | 44870058 | rs12804300 | A | G | rs12804300 | 20889312 | 6.77E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 46422686 | rs12574668 | C | A | rs12574668 | 21747397 | 1.02E-08 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 46499874 | rs7130141 | C | T | rs7130141 | 21747397 | 6.96E-09 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 46513249 | rs7112229 | C | T | rs7112229 | 21747397 | 7.38E-09 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 46560680 | rs11819869 | C | T | rs11819869 | 21747397 | 3.89E-09 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 47391039 | rs10769258 | C | T | rs10769258 | 19197363 | 5.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 47432303 | rs755553 | G | A | rs755553 | 19197363 | 3.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 47976882 | rs7936879 | A | G | rs7936879 | 22037552 | 5.50E-05 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 11 | 55522549 | rs11230864 | C | T | rs11230864 | 19571808 | 5.00E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 55522549 | rs11230864 | C | T | rs11230864 | 21791550 | 3.90E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 11 | 55584109 | rs451391 | T | C | rs451391 | 19571808 | 8.80E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 55760239 | rs2512941 | G | A | rs2512941 | 19571808 | 6.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 56268433 | rs627933 | A | G | rs627933 | 19571808 | 9.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,T |
| 11 | 56294275 | rs658845 | T | C | rs658845 | 19571808 | 8.00E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 56381507 | rs12365860 | C | T | rs12365860 | 19571808 | 3.10E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 56544017 | rs1015195 | A | G | rs1015195 | 19197363 | 3.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 56544017 | rs1015195 | A | G | rs1015195 | 19571808 | 3.10E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 56610412 | rs764855 | G | T | rs764855 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 57560452 | rs11570190 | A | C | rs11570190 | 19571811 | 3.93E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | CTNND1 |
| 11 | 57684005 | rs600488 | C | T | rs600488 | 22440650 | 0.000144 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 11 | 60715712 | rs566353 | C | T | rs566353 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 60901112 | rs666886 | C | T | rs666886 | 19197363 | 2.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 65802478 | rs12576969 | A | G | rs12576969 | 19850283 | 3.82E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 11 | 66033430 | rs2276036 | C | T | rs2276036 | 19850283 | 4.46E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 11 | 67588012 | rs10791946 | A | G | rs10791946 | 21926974 | 1.69E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 68217420 | rs676318 | T | C | rs676318 | 21747397 | 8.36E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 68217420 | rs676318 | T | C | rs676318 | 23637625 | 0.0000141 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 68441197 | rs6591348 | C | T | rs6591348 | 23637625 | 0.0000116 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 68855363 | rs3829241 | G | A | rs3829241 | 19850283 | 8.90E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 11 | 69021677 | rs11228589 | G | A | rs11228589 | 21688384 | 8.63E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 11 | 69025582 | rs7122303 | T | C | rs7122303 | 19197363 | 3.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 72433920 | rs12099027 | T | C | rs12099027 | 19571811 | 7.54E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | ARAP1 |
| 11 | 72997921 | rs11235714 | T | C | rs11235714 | 20038948 | 9.00E-06 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | P2RY6 |
| 11 | 77742826 | rs2372897 | A | G | rs2372897 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 77875386 | rs230669 | A | G | rs230669 | 19197363 | 4.28E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 79020289 | rs7931512 | A | G | rs7931512 | 20889312 | 3.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 79605008 | rs7122784 | T | G | rs7122784 | 19197363 | 3.70E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 84300326 | rs1807995 | C | A | rs1807995 | 19197363 | 6.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 86396588 | rs528948 | A | C | rs528948 | 19197363 | 6.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 86448765 | rs2433432 | A | G | rs2433432 | 19197363 | 3.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 86453415 | rs2433434 | G | A | rs2433434 | 19197363 | 4.54E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 86457182 | rs3096716 | C | T | rs3096716 | 19197363 | 6.50E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 91046705 | rs7934873 | A | G | rs7934873 | 22648509 | 8.36E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 11 | 91067077 | rs7929278 | G | A | rs7929278 | 22648509 | 5.40E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 11 | 91971198 | rs10830892 | A | T | rs10830892 | 20832056 | 2.77E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 11 | 94278713 | rs2230274 | C | T | rs2230274 | 20889312 | 3.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 94313230 | rs11020839 | A | G | rs11020839 | 20889312 | 5.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 94313757 | rs1105465 | A | G | rs1105465 | 20889312 | 8.91E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 94320708 | rs2186623 | C | T | rs2186623 | 20889312 | 7.26E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 94513070 | rs12418045 | T | C | rs12418045 | 22440650 | 8.79E-09 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | AMOTL1 |
| 11 | 96243337 | rs10501856 | G | T | rs10501856 | 20185149 | 2.16E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 11 | 96853065 | rs12420935 | A | G | rs12420935 | 22648509 | 3.94E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 11 | 96959525 | rs11224899 | G | A | rs11224899 | 22648509 | 2.00E-06 | NA | 1.9 | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | rs11224899-T | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 11 | 96965192 | rs11224938 | C | G | rs11224938 | 22648509 | 2.61E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 11 | 98080379 | rs11214383 | T | C | rs11214383 | 20889312 | 4.58E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98094673 | rs2155907 | C | T | rs2155907 | 20889312 | 2.02E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98094673 | rs2155907 | C | T | rs2155907 | pha002857 | 4.02E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 11 | 98098071 | rs2848520 | A | G | rs2848520 | 20889312 | 1.01E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98104605 | rs1941776 | T | C | rs1941776 | 20889312 | 1.74E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98113179 | rs2848519 | C | G,T | rs2848519 | 20889312 | 1.72E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98123504 | rs2848547 | T | C | rs2848547 | 20889312 | 3.52E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98124120 | rs2848546 | G | A | rs2848546 | 20889312 | 1.59E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98125404 | rs2509843 | A | G | rs2509843 | 20889312 | 2.00E-07 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 98125404 | rs2509843 | A | G | rs2509843 | 21926974 | 1.10E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 98125404 | rs2509843 | A | G | rs2509843 | pha002857 | 4.70E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 11 | 98148444 | rs11214631 | C | G | rs11214631 | 21688384 | 1.23E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 11 | 98605131 | rs963069 | T | C | rs963069 | 20832056 | 4.45E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 11 | 99629201 | rs1219050 | G | A | rs1219050 | 22883433 | 7.90E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 102800914 | rs4754052 | T | C | rs4754052 | 20889312 | 9.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 103121473 | rs3912622 | A | C | rs3912622 | 19197363 | 4.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 103318329 | rs581977 | A | G | rs581977 | 24253340 | 7.86E-05 | NA | 1.28 | [1.14-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 103334643 | rs313862 | T | C | rs313862 | 24253340 | 6.06E-05 | NA | 1.28 | [1.14-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 105098107 | rs1449045 | C | T | rs1449045 | 23358160 | 7.12E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 105423795 | rs2513265 | T | A | rs2513265 | 18521090 | 4.20E-05 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 11 | 106760002 | rs2187036 | G | A | rs2187036 | 23358160 | 7.02E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 106781292 | rs7103285 | C | A | rs7103285 | 23358160 | 6.51E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 108492651 | rs7925656 | A | G | rs7925656 | 20889312 | 2.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 109473911 | rs11213125 | T | C | rs11213125 | 20889312 | 6.88E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 110723177 | rs10891181 | G | T | rs10891181 | 21688384 | 5.15E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 11 | 112993848 | rs1273044 | T | C | rs1273044 | 19571809 | 8.43E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 11 | 113011721 | rs1245133 | A | G | rs1245133 | 19571809 | 1.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 11 | 113309869 | rs11214606 | C | T | rs11214606 | 21107309 | 5.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | DRD2 |
| 11 | 113443753 | rs6589386 | C | T | rs6589386 | 21791550 | 2.70E-07 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 11 | 114028774 | rs622200 | T | C | rs622200 | 19197363 | 2.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 114051904 | rs2073848 | T | C | rs2073848 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 114066438 | rs3782007 | G | A | rs3782007 | 19197363 | 6.89E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 114726012 | rs1916792 | T | A | rs1916792 | 21674006 | 5.81E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 11 | 115570349 | rs11826326 | G | A | rs11826326 | 21688384 | 5.24E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 11 | 116007539 | rs563272 | T | C | rs563272 | 21747397 | 4.36E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 116261676 | rs531860 | G | A | rs531860 | 20889312 | 2.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 116272339 | rs4938268 | A | G | rs4938268 | 19571811 | 6.92E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 11 | 116400382 | rs7941534 | A | G | rs7941534 | 20889312 | 8.00E-06 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 117932630 | rs625267 | T | C | rs625267 | 19197363 | 4.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 122049675 | rs17126243 | G | A | rs17126243 | 23637625 | 0.0000129 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 124606285 | rs12807809 | T | C | rs12807809 | 19571808 | 2.00E-09 | NA | 1.15 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12807809-T | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 124606285 | rs12807809 | T | C | rs12807809 | 21791550 | 2.80E-09 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 11 | 124606285 | rs12807809 | T | C | rs12807809 | 22479419 | 2.40E-09 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 11 | 124606285 | rs12807809 | T | C | rs12807809 | 23164818 | 0.00034 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 11 | 125304009 | rs1783925 | A | G | rs1783925 | 22648509 | 4.00E-07 | NA | 1.39 | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 11 | 125308076 | rs1615640 | G | C | rs1615640 | 22648509 | 1.08E-06 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 11 | 125313599 | rs7930295 | A | G | rs7930295 | 23894747 | 3.00E-06 | EA | 1.3 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7930295-G | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 11 | 125323965 | rs11220082 | C | T | rs11220082 | 21926974 | 2.57E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 125323965 | rs11220082 | C | T | rs11220082 | 22688191 | 7.00E-07 | NA | 1.1 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 125461709 | rs548181 | A | G | rs548181 | 21926974 | 1.00E-06 | NA | 1.1 | [1.06-1.14] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs548181-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 125497247 | rs3731399 | T | C | rs3731399 | 20832056 | 9.64E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | CHEK1 |
| 11 | 128283445 | rs1946007 | G | T | rs1946007 | 21688384 | 8.66E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 11 | 129206881 | rs7928467 | A | T | rs7928467 | 20889312 | 4.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 129218345 | rs7952135 | G | A | rs7952135 | 20889312 | 8.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 129231248 | rs7103242 | G | T | rs7103242 | 20889312 | 9.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 129251227 | rs1540666 | A | C | rs1540666 | 19197363 | 8.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 129619479 | rs7128882 | C | T | rs7128882 | 19571811 | 6.23E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 11 | 130425426 | rs1389241 | C | T | rs1389241 | 20889312 | 6.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 130709067 | rs7943936 | C | T | rs7943936 | 19197363 | 3.10E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 130716157 | rs7943757 | C | T | rs7943757 | 19197363 | 3.64E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 11 | 130733185 | rs7119425 | C | T | rs7119425 | 19197363 | 4.03E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 130739284 | rs2236711 | G | A | rs2236711 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 130742630 | rs1054869 | G | A | rs1054869 | 19197363 | 6.34E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 11 | 130749059 | rs12365680 | G | A | rs12365680 | 19197363 | 8.65E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 130794355 | rs11222395 | A | C | rs11222395 | 23637625 | 0.000136 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 130817579 | rs7940866 | T | A | rs7940866 | 23974872 | 2.00E-09 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7940866-T | Research Support, N.I.H., Extramural |
| 11 | 130830748 | rs10894294 | C | A | rs10894294 | 21926974 | 3.00E-06 | NA | 1.08 | [1.05-1.12] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 130830748 | rs10894294 | C | A | rs10894294 | 22688191 | 3.00E-07 | NA | 1.1 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 130850377 | rs10791109 | T | G | rs10791109 | 20889312 | 6.54E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 131336074 | rs992564 | G | T | rs992564 | 20889312 | 4.00E-06 | NA | 1.62 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 131656339 | rs10750489 | C | G | rs10750489 | 21926974 | 1.98E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 11 | 132389627 | rs1940400 | G | A | rs1940400 | 21795503 | 7.50E-04 | Schizophrenia | NA | NA | 189 Arab-Israeli individuals (from families) | Arab-Israeli(189) | ALL(189) | MEA(189) | ALL(189) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | Validation Studies | G |
| 11 | 132402910 | rs7125438 | G | A | rs7125438 | 19571809 | 2.32E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 11 | 132402910 | rs7125438 | G | A | rs7125438 | pha002859 | 2.08E-05 | phs000021 | 1.35 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | OPCML | intron | NM_002545 |
| 11 | 132928435 | rs7126587 | A | G | rs7126587 | 19197363 | 8.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 11 | 133492755 | rs11822149 | T | C | rs11822149 | 20889312 | 1.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 11 | 133603494 | rs12279437 | C | T | rs12279437 | 22440650 | 0.000343 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 11 | 133838905 | rs7106715 | C | T | rs7106715 | 23637625 | 0.0000652 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 698634 | rs2535436 | A | G | rs2535436 | pha002859 | 9.93E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NINJ2 | intron | NM_016533 |
| 12 | 1601896 | rs3741976 | C | T | rs3741976 | 21791550 | 8.80E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 12 | 1804880 | rs2058033 | T | G | rs2058033 | 19571809 | 6.07E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 1813774 | rs11061935 | A | G | rs11061935 | 19571809 | 4.06E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 1878392 | rs12821401 | C | A | rs12821401 | 19571809 | 3.46E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 2170433 | rs7972947 | C | A | rs7972947 | 21926974 | 7.77E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 2170433 | rs7972947 | C | A | rs7972947 | 23637625 | 0.000000532 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 2345295 | rs1006737 | G | A | rs1006737 | 23637625 | 0.0000352 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 2345295 | rs1006737 | G | A | rs1006737 | 23974872 | 5.00E-12 | NA | 1.1 | [1.08-1.13] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1006737-A | Research Support, N.I.H., Extramural |
| 12 | 2345295 | rs1006737 | G | A | rs1006737 | 24280982 | 2.00E-06 | (SCZ vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 12 | 2345295 | rs1006737 | G | A | rs1006737 | 24280982 | 6.00E-13 | (SCZ and BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 12 | 2345295 | rs1006737 | G | A | rs1006737 | 24280982 | 7.00E-08 | (BP vs. controls) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 12 | 2349584 | rs4765905 | G | C | rs4765905 | 21926974 | 2.00E-06 | NA | 1.08 | [1.05-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 2349584 | rs4765905 | G | C | rs4765905 | 22688191 | 1.00E-07 | NA | 1.36 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 2349584 | rs4765905 | G | C | rs4765905 | 22688191 | 2.00E-07 | NA | 1.11 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 2387099 | rs10744560 | C | T | rs10744560 | 20889312 | 4.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 2683332 | rs2238090 | A | G | rs2238090 | 19571811 | 8.58E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | CACNA1C |
| 12 | 4262862 | rs6489520 | A | G | rs6489520 | 20889312 | 1.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 5813534 | rs1544608 | C | A | rs1544608 | 19197363 | 8.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 8891527 | rs2969097 | A | G | rs2969097 | 19197363 | 2.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 9959149 | rs7955679 | A | G | rs7955679 | 22440650 | 0.000213 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 12 | 10367886 | rs4326886 | C | T | rs4326886 | 20889312 | 2.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 10785012 | rs10845187 | C | G | rs10845187 | 19571809 | 9.03E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 11174753 | rs1868769 | G | A | rs1868769 | 22648509 | 4.58E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | A |
| 12 | 11952424 | rs762721 | A | C | rs762721 | 19571811 | 4.42E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | ETV6 |
| 12 | 13989019 | rs2284425 | G | T | rs2284425 | 22440650 | 0.0000821 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | GRIN2B |
| 12 | 15168791 | rs1558789 | C | A | rs1558789 | 22440650 | 0.000106 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 12 | 16650161 | rs992690 | G | T | rs992690 | 19197363 | 5.05E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 18325335 | rs11559740 | C | T | rs11559740 | 20889312 | 7.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 18473729 | rs11044026 | T | C | rs11044026 | 24086445 | 5.45E-06 | vermisL10,Typed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIK3C2G |
| 12 | 18488064 | rs12580062 | A | G | rs12580062 | 24086445 | 4.71E-06 | vermisL10,Imputed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PIK3C2G |
| 12 | 18508252 | rs11044045 | C | T | rs11044045 | 24086445 | 3.00E-06 | vermisR10,Imputed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PIK3C2G |
| 12 | 18508252 | rs11044045 | C | T | rs11044045 | 24086445 | 5.15E-06 | vermisR10,Imputed | 0.05 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PIK3C2G |
| 12 | 18572602 | rs10770359 | A | G | rs10770359 | 24086445 | 6.50E-06 | vermisL10,Typed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PIK3C2G |
| 12 | 18572602 | rs10770359 | A | G | rs10770359 | 24086445 | 9.02E-06 | vermisR10,Typed | 0.05 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PIK3C2G |
| 12 | 18575554 | rs12581163 | T | C | rs12581163 | 24086445 | 2.70E-06 | vermisL10,Typed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIK3C2G |
| 12 | 18575554 | rs12581163 | T | C | rs12581163 | 24086445 | 5.56E-06 | vermisR10,Typed | 0.05 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIK3C2G |
| 12 | 18584676 | rs11044106 | T | G | rs11044106 | 24086445 | 4.36E-06 | vermisL10,Imputed | 0.04 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIK3C2G |
| 12 | 18584676 | rs11044106 | T | G | rs11044106 | 24086445 | 9.39E-06 | vermisR10,Imputed | 0.05 | [NA] unit decrease | 74 Han Chinese ancestry cases; 51 Han Chinese ancestry controls | Han Chinese(125) | ALL(125) | ASN(125) | ALL(125) | Gray matter volume (schizophrenia interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIK3C2G |
| 12 | 19738434 | rs11044702 | T | G | rs11044702 | 22648509 | 4.89E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 12 | 19872765 | rs7139246 | A | C,T | rs7139246 | 20889312 | 8.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 20036289 | rs16915343 | C | A | rs16915343 | 20889312 | 3.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 20290761 | rs16922688 | T | G | rs16922688 | 19197363 | 3.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 27693851 | rs306657 | A | T | rs306657 | 19850283 | 3.09E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 12 | 27797905 | rs7295096 | A | G | rs7295096 | 20889312 | 5.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 29081823 | rs16933618 | T | A | rs16933618 | 20889312 | 1.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 29081823 | rs16933618 | T | A | rs16933618 | pha002857 | 3.44E-05 | phs000021 | 1.69 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 12 | 29648191 | rs10492374 | T | G | rs10492374 | 20889312 | 8.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 29872318 | rs16934812 | T | G | rs16934812 | 22885689 | 7.00E-06 | EA | 1.34 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 32244773 | rs2652007 | G | A | rs2652007 | 22037552 | 5.00E-04 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 12 | 32648257 | rs2088809 | C | T | rs2088809 | 20889312 | 1.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 32896944 | rs3600 | C | T | rs3600 | 20889312 | 3.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 40830583 | rs11564168 | T | C | rs11564168 | 19197363 | 6.49E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 43303486 | rs7966133 | T | A | rs7966133 | 20889312 | 8.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 44034672 | rs277206 | G | A | rs277206 | 20185149 | 3.26E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 12 | 47476227 | rs2898002 | C | G | rs2898002 | 21926974 | 4.65E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 47880149 | rs7955374 | C | T | rs7955374 | 19571811 | 8.26E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 12 | 48391055 | rs7971880 | G | A | rs7971880 | 20889312 | 1.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 48403765 | rs11168351 | G | A | rs11168351 | 20889312 | 9.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 48600520 | rs10875770 | A | G | rs10875770 | 19571809 | 8.69E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 48911217 | rs11615184 | A | G | rs11615184 | 20185149 | 2.36E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 12 | 49678212 | rs3847764 | A | G | rs3847764 | 22440650 | 0.000809 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 12 | 50433234 | rs1105203 | C | T | rs1105203 | 19197363 | 4.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 52263956 | rs17126180 | C | G | rs17126180 | 21107309 | 9.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 12 | 52726792 | rs2226907 | C | T | rs2226907 | 19197363 | 8.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 52942362 | rs622446 | G | A | rs622446 | 19197363 | 3.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 53731891 | rs10876432 | G | A | rs10876432 | 19197363 | 5.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 53734506 | rs4759082 | C | T | rs4759082 | 19197363 | 7.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 53927554 | rs784568 | C | A | rs784568 | 19197363 | 5.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 53964133 | rs1247955 | G | T | rs1247955 | 19197363 | 5.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 54001237 | rs7970141 | G | A | rs7970141 | 19197363 | 7.02E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 54073069 | rs7976793 | G | T | rs7976793 | 24253340 | 8.40E-05 | NA | 1.27 | [1.12-1.43] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 57978740 | rs775251 | C | T | rs775251 | 20889312 | 3.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 58737269 | rs2698250 | T | C | rs2698250 | 20889312 | 5.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 58750741 | rs1729790 | C | G | rs1729790 | 20889312 | 6.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 58787122 | rs12424547 | G | T | rs12424547 | 20889312 | 2.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 58813930 | rs782099 | G | C | rs782099 | 20889312 | 9.62E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 68532077 | rs12321565 | T | C | rs12321565 | 20889312 | 5.00E-06 | NA | 1.35 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 68569191 | rs12308338 | G | C | rs12308338 | 20889312 | 5.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 68582271 | rs12309496 | A | T | rs12309496 | 20889312 | 6.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 68767127 | rs5011574 | G | T | rs5011574 | 24253340 | 9.65E-05 | NA | 1.27 | [1.12-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 70934961 | rs2278345 | C | T | rs2278345 | 19197363 | 8.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 72233949 | rs328764 | G | A | rs328764 | 20889312 | 3.07E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 74817329 | rs10879771 | C | A | rs10879771 | 19571808 | 8.80E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 75919693 | rs1275475 | T | C | rs1275475 | 19571808 | 1.60E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 75981887 | rs1383098 | C | T | rs1383098 | 21791550 | 9.70E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 12 | 76016961 | rs1383102 | T | C | rs1383102 | 19571808 | 5.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 78895436 | rs1922395 | A | G | rs1922395 | 21674006 | 2.05E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 12 | 80840771 | rs7311270 | G | A | rs7311270 | 23358160 | 2.50E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 80853649 | rs11837911 | G | A | rs11837911 | 23358160 | 4.13E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 81843128 | rs12426725 | G | A | rs12426725 | 22885689 | 4.00E-06 | EA | 1.37 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 83043909 | rs17840860 | A | G | rs17840860 | 20889312 | 8.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 83059070 | rs17778686 | T | A | rs17778686 | 20889312 | 9.20E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 85178759 | rs12580834 | G | C | rs12580834 | 20889312 | 1.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 85449465 | rs7974418 | T | A | rs7974418 | 20889312 | 6.22E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 85578064 | rs2660454 | G | A | rs2660454 | 20889312 | 3.23E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 86139905 | rs2126590 | A | G | rs2126590 | 24253340 | 6.07E-05 | NA | 1.39 | [1.18-1.64] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 89150244 | rs17016022 | G | A | rs17016022 | 20832056 | 3.82E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 12 | 89473626 | rs11105168 | A | C | rs11105168 | 24253340 | 1.23E-06 | NA | 1.32 | [1.17-1.49] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 90977131 | rs2051713 | C | T | rs2051713 | 19197363 | 1.70E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 90977734 | rs2723902 | T | G | rs2723902 | 19197363 | 1.40E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 94870643 | rs10777592 | C | T | rs10777592 | 24253340 | 3.33E-05 | NA | 1.28 | [1.14-1.44] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 95965690 | rs6538657 | T | C | rs6538657 | 20889312 | 5.61E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 95965797 | rs7968140 | T | A | rs7968140 | 20889312 | 4.95E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 96106943 | rs4129599 | T | A,C,G | rs4129599 | 21674006 | 4.71E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NTN4 |
| 12 | 97509968 | rs6538780 | T | A | rs6538780 | 19571811 | 4.13E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 12 | 100266113 | rs11110077 | C | G | rs11110077 | 21107309 | 4.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | ANKS1B |
| 12 | 100575773 | rs7960152 | A | C | rs7960152 | 22440650 | 0.000761 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 12 | 100852705 | rs11110385 | C | T | rs11110385 | 19197363 | 8.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 101223660 | rs11110540 | T | C | rs11110540 | 20185149 | 2.15E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 12 | 101238028 | rs17403347 | A | G | rs17403347 | 20185149 | 5.85E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 12 | 104974021 | rs313327 | C | T | rs313327 | 21926974 | 8.17E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 105180145 | rs2468083 | A | G | rs2468083 | 19571811 | 2.62E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 12 | 105711368 | rs1469664 | G | T | rs1469664 | 22440650 | 0.0000132 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 12 | 105713218 | rs1469662 | T | C | rs1469662 | 22440650 | 0.00015 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 12 | 106083042 | rs2888865 | G | A | rs2888865 | 19197363 | 4.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 108167002 | rs57043169 | A | C,G | rs57043169 | 22883433 | 7.08E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 108594069 | rs4964656 | G | C | rs4964656 | 20889312 | 5.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 112110489 | rs3782886 | T | C | rs3782886 | 22037552 | 2.62E-05 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | BRAP |
| 12 | 113478072 | rs2001298 | A | C | rs2001298 | 19197363 | 2.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 113551392 | rs7978582 | A | G | rs7978582 | 19197363 | 8.92E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 114646834 | rs11066989 | C | T | rs11066989 | 20889312 | 5.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 114646859 | rs12229813 | C | T | rs12229813 | 20889312 | 5.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 114692626 | rs17660176 | G | A | rs17660176 | 20832056 | 3.39E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 12 | 114705586 | rs1920592 | C | T | rs1920592 | 23212062 | 1.00E-06 | Mood symptoms | 0.11 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 12 | 114849237 | rs1996821 | G | A | rs1996821 | 19197363 | 6.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 115049923 | rs7964041 | G | A | rs7964041 | 21926974 | 6.41E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 12 | 115453937 | rs10492258 | C | G | rs10492258 | pha002859 | 6.91E-05 | phs000021 | 1.31 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 12 | 116387630 | rs6490045 | A | G | rs6490045 | 19571809 | 3.57E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 12 | 118005342 | rs10850842 | A | C | rs10850842 | 21747397 | 1.32E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 118079776 | rs7979936 | C | T | rs7979936 | 20832056 | 4.36E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | KSR2 |
| 12 | 118101685 | rs16947853 | C | T | rs16947853 | 20832056 | 2.05E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | KSR2 |
| 12 | 118519441 | rs4767658 | T | C | rs4767658 | 19197363 | 4.09E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 118519441 | rs4767658 | T | C | rs4767658 | 19571808 | 4.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 118520426 | rs7488514 | C | T | rs7488514 | 19571808 | 9.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 119818509 | rs11064768 | A | G | rs11064768 | 18332876 | 1.00E-06 | NA | NA | 574 cases; 605 controls; 1,148 parents of cases | NOPOP(2327) | ALL(2327) | NOPOP(2327) | ALL(2327) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs11064768-A | Research Support, Non-U.S. Gov't | A | CCDC60 | |
| 12 | 123731423 | rs11532322 | A | G | rs11532322 | 23974872 | 2.00E-08 | NA | 1.09 | [1.06-1.13] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs11532322-A | Research Support, N.I.H., Extramural |
| 12 | 125807035 | rs3843671 | G | A | rs3843671 | 19197363 | 7.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 12 | 129585113 | rs10847765 | G | A | rs10847765 | 20889312 | 2.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 12 | 129707854 | rs4411335 | C | T | rs4411335 | 19197363 | 6.09E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 12 | 129710791 | rs1482294 | G | A | rs1482294 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 129739046 | rs11060225 | A | G | rs11060225 | 21926974 | 7.26E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 12 | 130780226 | rs4759647 | C | T | rs4759647 | 21688384 | 4.50E-04 | Schizophrenia age at onset (males) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 12 | 131225119 | rs4759511 | C | T | rs4759511 | 21926974 | 6.66E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 22562993 | rs3129601 | A | G | rs3129601 | 20832056 | 3.37E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 13 | 22861921 | rs9316871 | A | G | rs9316871 | 19571808 | 9.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 23596330 | rs12430946 | G | A | rs12430946 | 19197363 | 4.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 23638279 | rs9634385 | G | A | rs9634385 | 20889312 | 8.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 25072200 | rs1965154 | T | A,C | rs1965154 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 25291876 | rs9318740 | T | C | rs9318740 | 20889312 | 7.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 26037909 | rs4770836 | T | C | rs4770836 | 20889312 | 4.68E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 26037960 | rs4770837 | C | G | rs4770837 | 20889312 | 5.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 27720562 | rs7337844 | C | T | rs7337844 | 20832056 | 2.08E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | USP12 |
| 13 | 28040502 | rs1885990 | C | T | rs1885990 | 21747397 | 5.60E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 28077144 | rs9512730 | G | C | rs9512730 | 18347602 | 5.00E-06 | 1.52 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | G | |
| 13 | 31371737 | rs12872037 | G | A | rs12872037 | 20889312 | 3.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 32618005 | rs456705 | T | G | rs456705 | 19197363 | 3.02E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 32855018 | rs11617975 | C | T | rs11617975 | 24253340 | 8.46E-05 | NA | 1.3 | [1.14-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 33651505 | rs9536357 | G | A | rs9536357 | 19571809 | 5.10E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 13 | 34025577 | rs9527554 | A | G | rs9527554 | 20832056 | 1.15E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | STARD13 |
| 13 | 34025997 | rs9527555 | G | C | rs9527555 | 20832056 | 1.03E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | STARD13 |
| 13 | 34043750 | rs9315215 | C | T | rs9315215 | 20832056 | 1.41E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | STARD13 |
| 13 | 34084052 | rs12858634 | C | T | rs12858634 | 20832056 | 5.00E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | STARD13 |
| 13 | 36424698 | rs10507433 | C | T | rs10507433 | 19197363 | 1.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C,T |
| 13 | 37386100 | rs9547678 | G | A | rs9547678 | 22440650 | 0.000654 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 13 | 37547260 | rs8000946 | A | T | rs8000946 | 19571811 | 1.90E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | ALG5 |
| 13 | 39002924 | rs17299897 | T | C | rs17299897 | 20889312 | 7.31E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 40948151 | rs913246 | C | T | rs913246 | 20889312 | 7.00E-06 | NA | 1.94 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 42037935 | rs7326471 | C | T | rs7326471 | 19197363 | 8.31E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 44706268 | rs9595066 | T | C | rs9595066 | 20889312 | 2.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 44708720 | rs9533777 | G | A | rs9533777 | 20889312 | 3.86E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 47277099 | rs842392 | A | T | rs842392 | 21674006 | 1.61E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | LRCH1 |
| 13 | 48393070 | rs17070879 | C | T | rs17070879 | 20889312 | 5.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 50271072 | rs2181184 | G | A | rs2181184 | 22440650 | 0.000000306 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 13 | 51366753 | rs7320457 | T | C | rs7320457 | 20832056 | 1.86E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | DLEU7 |
| 13 | 54287978 | rs3989552 | G | A | rs3989552 | 20889312 | 6.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54289391 | rs7321508 | A | G | rs7321508 | 20889312 | 6.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54292061 | rs9316653 | A | T | rs9316653 | 20889312 | 5.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54319996 | rs7328513 | T | C | rs7328513 | 20889312 | 4.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54333209 | rs4293248 | A | G | rs4293248 | 20889312 | 9.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54345721 | rs9536539 | G | C | rs9536539 | 20889312 | 2.95E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54377682 | rs9591536 | A | G | rs9591536 | 20889312 | 6.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54381248 | rs990157 | C | T | rs990157 | 20889312 | 3.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54383477 | rs7338269 | A | G | rs7338269 | 20889312 | 3.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54413349 | rs4471558 | T | A | rs4471558 | 20889312 | 1.95E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54418506 | rs1379831 | G | C | rs1379831 | 20889312 | 4.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54427874 | rs7995218 | C | G | rs7995218 | 20889312 | 4.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54434565 | rs1458269 | T | C | rs1458269 | 20889312 | 1.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54435237 | rs6561750 | C | T | rs6561750 | 20889312 | 9.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54444856 | rs1419186 | G | T | rs1419186 | 20889312 | 4.38E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54445269 | rs9536558 | T | C | rs9536558 | 20889312 | 5.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54448513 | rs4242932 | T | G | rs4242932 | 20889312 | 1.15E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 54455196 | rs9536560 | T | C | rs9536560 | 20889312 | 1.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 57602909 | rs4322543 | A | G | rs4322543 | 19197363 | 8.12E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 57610809 | rs9527585 | A | G | rs9527585 | 19197363 | 1.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 57615842 | rs4581598 | C | A | rs4581598 | 19197363 | 1.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 59476905 | rs2019242 | G | A | rs2019242 | 19197363 | 5.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 59485570 | rs9317024 | T | C | rs9317024 | 20185149 | 5.59E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 13 | 59488129 | rs9538246 | A | G | rs9538246 | 20185149 | 7.34E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 13 | 59495894 | rs1417312 | A | G | rs1417312 | 20185149 | 8.15E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 13 | 59499221 | rs9597908 | C | G | rs9597908 | 20185149 | 3.69E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 13 | 59499423 | rs9597909 | C | T | rs9597909 | 20185149 | 7.99E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 13 | 59510412 | rs1417316 | A | G | rs1417316 | 20185149 | 3.32E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 13 | 59528155 | rs1340570 | G | C | rs1340570 | 20185149 | 3.06E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 13 | 61965303 | rs2323266 | T | G | rs2323266 | 23212062 | 3.00E-06 | Positive symptoms | 0.1 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 13 | 64954154 | rs11617469 | C | G | rs11617469 | 20832056 | 4.16E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 13 | 65900693 | rs965281 | T | C | rs965281 | 22440650 | 0.000397 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 13 | 66159056 | rs9564266 | A | G | rs9564266 | 22440650 | 0.0000832 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 13 | 66863184 | rs4884665 | T | C | rs4884665 | 19571808 | 7.80E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 66965826 | rs166500 | A | G | rs166500 | 20832056 | 1.52E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PCDH9 |
| 13 | 71327001 | rs930516 | G | A | rs930516 | 19197363 | 5.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 74927727 | rs2325620 | C | T | rs2325620 | 23358160 | 1.54E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 77908932 | rs7986578 | T | G | rs7986578 | 22440650 | 0.000657 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 13 | 77909110 | rs7985601 | C | T | rs7985601 | 22440650 | 0.000368 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 13 | 77912593 | rs6562990 | T | C | rs6562990 | 22440650 | 0.000578 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 13 | 78317503 | rs3812830 | A | G | rs3812830 | 20185149 | 4.98E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 13 | 78375813 | rs8000788 | C | T | rs8000788 | 20185149 | 7.77E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 13 | 78375921 | rs8002271 | T | C | rs8002271 | 20185149 | 7.77E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 13 | 78392758 | rs10507874 | T | G | rs10507874 | 20185149 | 7.77E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 13 | 78430079 | rs605393 | A | G | rs605393 | 20185149 | 1.18E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 13 | 78470350 | rs4885491 | A | G | rs4885491 | 20185149 | 1.91E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 13 | 78504855 | rs2329049 | G | A | rs2329049 | 20185149 | 1.75E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 13 | 78541952 | rs4884076 | C | T | rs4884076 | 20185149 | 1.27E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 13 | 78605893 | rs944378 | G | A | rs944378 | 20185149 | 8.05E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 13 | 78611929 | rs1330897 | G | A | rs1330897 | 20185149 | 6.55E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 13 | 79438168 | rs9574320 | G | T | rs9574320 | 19197363 | 5.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 81315134 | rs2794246 | T | A | rs2794246 | 20889312 | 7.57E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 81753314 | rs12584499 | C | G | rs12584499 | 19571811 | 6.17E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 13 | 84321857 | rs1576741 | A | G | rs1576741 | 20889312 | 5.55E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 92371090 | rs462954 | A | G | rs462954 | 19197363 | 3.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 94341096 | rs9561428 | G | A | rs9561428 | 20889312 | 9.00E-06 | NA | 1.83 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 94984210 | rs17196161 | T | C | rs17196161 | 22648509 | 3.12E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 13 | 95004765 | rs9516401 | C | T | rs9516401 | 22648509 | 4.47E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 13 | 95015438 | rs9516403 | T | C | rs9516403 | 22648509 | 7.52E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T,C |
| 13 | 95015753 | rs9524460 | T | C | rs9524460 | 22648509 | 9.84E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 13 | 95843575 | rs9524822 | T | C | rs9524822 | 19571809 | 5.73E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 13 | 97835876 | rs9556688 | C | T | rs9556688 | 20889312 | 3.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 97861011 | rs9516865 | A | G | rs9516865 | 19197363 | 6.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 98038577 | rs1806507 | G | A | rs1806507 | 19197363 | 6.82E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 98183886 | rs1328657 | C | T | rs1328657 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 98308641 | rs1327918 | G | A | rs1327918 | 19197363 | 4.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 99045687 | rs583704 | G | A | rs583704 | 19197363 | 3.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 99195090 | rs12853561 | C | T | rs12853561 | 19571811 | 9.92E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | STK24 |
| 13 | 100666633 | rs2390334 | C | T | rs2390334 | 19197363 | 4.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 13 | 100697937 | rs9554662 | T | G | rs9554662 | 19197363 | 5.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 100747566 | rs9557378 | G | A | rs9557378 | 19197363 | 4.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 100751208 | rs6491544 | T | C | rs6491544 | 19197363 | 5.78E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 101700124 | rs678255 | G | C | rs678255 | 20889312 | 1.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101701747 | rs3751403 | C | T | rs3751403 | 19571809 | 4.55E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 13 | 101701747 | rs3751403 | C | T | rs3751403 | 20889312 | 3.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101701747 | rs3751403 | C | T | rs3751403 | pha002857 | 2.10E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 13 | 101701764 | rs628949 | G | C | rs628949 | 20889312 | 2.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101704076 | rs12430088 | C | T | rs12430088 | 19571809 | 2.30E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 13 | 101704076 | rs12430088 | C | T | rs12430088 | 20889312 | 2.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101704076 | rs12430088 | C | T | rs12430088 | pha002857 | 5.11E-05 | phs000021 | 1.26 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 13 | 101708310 | rs2044117 | G | A | rs2044117 | 20889312 | 5.00E-07 | NA | 1.3 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101708310 | rs2044117 | G | A | rs2044117 | pha002857 | 1.34E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NALCN | intron | NM_052867 |
| 13 | 101720487 | rs17581500 | T | A | rs17581500 | 20889312 | 2.53E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 101738035 | rs12867417 | G | A | rs12867417 | 20889312 | 2.98E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 102764516 | rs652157 | T | C | rs652157 | 19197363 | 6.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 102803631 | rs4772445 | G | A | rs4772445 | 19197363 | 4.88E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 106069209 | rs4517638 | G | A | rs4517638 | 23637625 | 0.000011 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 106650093 | rs9558661 | C | T | rs9558661 | 20889312 | 1.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 106650873 | rs4297565 | G | T | rs4297565 | 20889312 | 2.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 106651661 | rs4996815 | G | T | rs4996815 | 20889312 | 1.00E-07 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 106654538 | rs470422 | A | G | rs470422 | 20889312 | 2.64E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 107074013 | rs9587137 | G | T | rs9587137 | 19197363 | 8.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 13 | 107898340 | rs7993272 | T | C | rs7993272 | 19197363 | 7.84E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 13 | 107899441 | rs4771568 | G | A | rs4771568 | 19197363 | 4.30E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 110925809 | rs9559759 | C | T | rs9559759 | 20832056 | 3.78E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | COL4A1 |
| 13 | 111030578 | rs7319311 | A | G | rs7319311 | 20889312 | 4.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 111031092 | rs7320755 | G | C | rs7320755 | 20889312 | 5.77E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 111243736 | rs9559849 | A | G | rs9559849 | 19197363 | 1.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 13 | 111295695 | rs7324648 | C | A | rs7324648 | 20889312 | 8.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 111308793 | rs9670064 | G | A | rs9670064 | 20889312 | 3.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 13 | 111973588 | rs11841484 | C | T | rs11841484 | 19197363 | 4.43E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 114886976 | rs9525275 | T | C | rs9525275 | 22883433 | 1.99E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 13 | 114916406 | rs7317882 | G | T | rs7317882 | 20889312 | 5.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 20781361 | rs2297732 | A | G | rs2297732 | 24253340 | 1.96E-05 | NA | 1.3 | [1.16-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 20782165 | rs10131909 | T | C | rs10131909 | 24253340 | 8.16E-05 | NA | 1.37 | [1.18-1.61] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 21195471 | rs8023192 | A | C | rs8023192 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 21697858 | rs7147840 | T | C | rs7147840 | 19197363 | 4.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 22580570 | rs1040301 | C | G | rs1040301 | 20889312 | 1.55E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 22591821 | rs8018887 | T | C | rs8018887 | 20889312 | 3.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 23299135 | rs1135641 | G | T | rs1135641 | 21747397 | 6.64E-04 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 24002887 | rs3742489 | G | T | rs3742489 | 20889312 | 9.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 24008406 | rs3783437 | A | G | rs3783437 | 20889312 | 3.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 24618859 | rs743272 | A | G | rs743272 | 19197363 | 1.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 24878485 | rs12897153 | G | A | rs12897153 | 22883433 | 7.84E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 25281219 | rs2297060 | T | C | rs2297060 | 22440650 | 0.00023 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 14 | 26935221 | rs1245214 | G | A | rs1245214 | 19197363 | 5.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 26958004 | rs178205 | T | C | rs178205 | 19197363 | 5.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 14 | 27406892 | rs17111920 | G | T | rs17111920 | 20889312 | 3.00E-06 | NA | 2.41 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 30824870 | rs8018224 | G | A | rs8018224 | 19571811 | 5.47E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 14 | 32093548 | rs7142881 | G | A | rs7142881 | 18521091 | 2.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs7142881-A | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 14 | 32337997 | rs8016004 | G | T | rs8016004 | pha002857 | 3.64E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 14 | 32341906 | rs9322878 | G | A | rs9322878 | 19571809 | 5.73E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 32344077 | rs2151784 | C | T | rs2151784 | 19571809 | 7.51E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 32344077 | rs2151784 | C | T | rs2151784 | pha002857 | 3.65E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 14 | 32355076 | rs6571481 | G | T | rs6571481 | 19571809 | 2.24E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 32355076 | rs6571481 | G | T | rs6571481 | pha002857 | 1.55E-05 | phs000021 | 1.27 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 14 | 32433858 | rs915071 | C | T | rs915071 | 19571809 | 3.94E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 32433858 | rs915071 | C | T | rs915071 | 20889312 | 2.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 32433858 | rs915071 | C | T | rs915071 | pha002857 | 4.18E-06 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 14 | 32435312 | rs972396 | C | T | rs972396 | 19571809 | 3.15E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 32435312 | rs972396 | C | T | rs972396 | 20889312 | 5.77E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 32435312 | rs972396 | C | T | rs972396 | pha002857 | 7.82E-06 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 14 | 32438484 | rs1952966 | G | A | rs1952966 | 20889312 | 6.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 32438484 | rs1952966 | G | A | rs1952966 | pha002857 | 4.84E-05 | phs000021 | 1.25 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 14 | 32473942 | rs10135304 | G | T | rs10135304 | 20889312 | 2.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 33630326 | rs11621540 | T | G | rs11621540 | 19197363 | 6.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 33713054 | rs243284 | T | C | rs243284 | 20832056 | 3.90E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NPAS3 |
| 14 | 33851414 | rs11851892 | C | T | rs11851892 | 18521090 | 2.80E-05 | NA | NA | NA | 106 individuals mixed race/ethnicity | NOPOP(106) | ALL(106) | NOPOP(106) | ALL(106) | Effectiveness of iloperidone treatment in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Randomized Controlled Trial | Multicenter Study | Clinical Trial, Phase III |
| 14 | 34040582 | rs7143076 | A | G | rs7143076 | 24253340 | 5.12E-05 | NA | 1.56 | [1.25-1.96] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 34436957 | rs7142406 | C | T | rs7142406 | 19197363 | 4.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 35219345 | rs2010608 | A | G | rs2010608 | 19197363 | 5.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 14 | 35636369 | rs10498331 | T | C | rs10498331 | 19571809 | 4.36E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 35636369 | rs10498331 | T | C | rs10498331 | pha002859 | 1.12E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | KIAA0391 | intron | NM_014672 |
| 14 | 35637717 | rs7144806 | C | A | rs7144806 | 19571809 | 4.96E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 35637717 | rs7144806 | C | A | rs7144806 | pha002859 | 1.53E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | KIAA0391 | intron | NM_014672 |
| 14 | 35640714 | rs6571697 | A | G | rs6571697 | 19571809 | 6.47E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 35640714 | rs6571697 | A | G | rs6571697 | pha002859 | 2.02E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | KIAA0391 | intron | NM_014672 |
| 14 | 35823231 | rs10135277 | C | T | rs10135277 | 21926974 | 5.11E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 36387874 | rs7157531 | G | A | rs7157531 | 20889312 | 9.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 39178459 | rs6571869 | G | T | rs6571869 | 21674006 | 1.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 14 | 39192032 | rs1470655 | A | G | rs1470655 | 21674006 | 1.22E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 14 | 41435764 | rs1176970 | G | C | rs1176970 | 20832056 | 3.20E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 14 | 42542317 | rs8004273 | G | A | rs8004273 | 19197363 | 7.69E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 42548912 | rs1542668 | A | G | rs1542668 | 19197363 | 6.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 47083005 | rs10139381 | T | C | rs10139381 | 19197363 | 1.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 48510590 | rs712476 | G | T | rs712476 | 20832056 | 7.82E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 14 | 51217574 | rs4901053 | T | G | rs4901053 | 19197363 | 1.98E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 51802911 | rs11157816 | C | T | rs11157816 | 19571809 | 2.26E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 51802911 | rs11157816 | C | T | rs11157816 | pha002859 | 7.91E-05 | phs000021 | 1.28 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | LOC283553 | intron | NR_038358 |
| 14 | 54132654 | rs10141869 | A | C | rs10141869 | 20889312 | 5.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 54145317 | rs7146962 | T | C | rs7146962 | 20889312 | 3.29E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 54857286 | rs4293296 | G | A | rs4293296 | 21107309 | 3.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 14 | 56006169 | rs8011732 | A | G | rs8011732 | 23212062 | 2.35E-05 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 14 | 56023822 | rs942317 | A | C | rs942317 | 23212062 | 5.76E-05 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 14 | 56584499 | rs3186565 | C | T | rs3186565 | 19850283 | 2.59E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 14 | 56683530 | rs1479748 | G | A | rs1479748 | 19197363 | 6.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 58200725 | rs1092015 | A | G | rs1092015 | 20889312 | 8.00E-06 | NA | 2.04 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 59380832 | rs10150328 | T | C | rs10150328 | 19571811 | 2.08E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 14 | 59585670 | rs17255290 | A | T | rs17255290 | 19571809 | 3.22E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 61990861 | rs12883769 | C | T | rs12883769 | 21747397 | 9.12E-05 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 62051682 | rs2255998 | G | A | rs2255998 | 20889312 | 5.64E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 62074238 | rs17834568 | A | G | rs17834568 | 20889312 | 2.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 62109630 | rs17099010 | C | T | rs17099010 | 20889312 | 1.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 65026242 | rs3742604 | G | A | rs3742604 | 19571809 | 9.77E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 65040680 | rs2123461 | G | A | rs2123461 | 19571809 | 6.93E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 65040680 | rs2123461 | G | A | rs2123461 | pha002859 | 1.66E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | PPP1R36 | intron | NM_172365 |
| 14 | 66413390 | rs8013361 | T | C | rs8013361 | 19197363 | 3.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 66559749 | rs7148664 | C | T | rs7148664 | 19571811 | 6.97E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 14 | 69789755 | rs3902951 | T | G | rs3902951 | 22883433 | 8.25E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 14 | 71249802 | rs17108533 | C | T | rs17108533 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | MAP3K9 |
| 14 | 72416763 | rs714975 | C | T | rs714975 | 21926974 | 6.37E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 75310812 | rs2058919 | G | C | rs2058919 | 19571811 | 8.25E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 14 | 75694927 | rs741197 | G | A | rs741197 | 19197363 | 5.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 14 | 77759597 | rs4899649 | T | C | rs4899649 | 19571811 | 7.31E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | POMT2 |
| 14 | 78862719 | rs2192420 | A | G | rs2192420 | 19571809 | 5.77E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 78927284 | rs2192412 | C | T | rs2192412 | 19571809 | 8.26E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 79021758 | rs17107847 | C | A | rs17107847 | 19571809 | 9.23E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 80373231 | rs10483936 | G | A | rs10483936 | 21674006 | 6.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 14 | 81647878 | rs8007841 | T | C | rs8007841 | 20889312 | 5.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 14 | 84589814 | rs17624209 | T | G | rs17624209 | 20832056 | 4.75E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 14 | 87050806 | rs1959305 | A | G | rs1959305 | 19197363 | 4.40E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 14 | 87063954 | rs8014279 | T | C | rs8014279 | 19197363 | 5.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 88221584 | rs1288709 | C | T | rs1288709 | 19197363 | 6.26E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 88275954 | rs12881243 | C | A | rs12881243 | 19197363 | 4.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 14 | 88612417 | rs1940532 | T | C | rs1940532 | 20832056 | 1.95E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 14 | 88823655 | rs1955598 | A | G | rs1955598 | 19571809 | 3.68E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88826841 | rs12586714 | C | A | rs12586714 | 19571809 | 3.19E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88852166 | rs4904448 | G | A | rs4904448 | 19571809 | 4.69E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88938652 | rs2274736 | A | G | rs2274736 | 19571809 | 7.97E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88946622 | rs2401751 | G | A | rs2401751 | 19571809 | 7.87E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88951006 | rs1864744 | C | G | rs1864744 | 19571809 | 7.59E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88967336 | rs816069 | C | A | rs816069 | 19571809 | 2.21E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88973684 | rs7160647 | C | T | rs7160647 | 19571809 | 3.49E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88976415 | rs10138002 | C | T | rs10138002 | 19571809 | 9.19E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88976472 | rs10150311 | T | C | rs10150311 | 19571809 | 5.27E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 88976950 | rs11847417 | C | T | rs11847417 | 19571809 | 3.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89000903 | rs8017811 | G | A | rs8017811 | 19571809 | 3.91E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89102558 | rs1144918 | T | C | rs1144918 | 19571809 | 2.79E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89105536 | rs1287825 | A | G | rs1287825 | 19571809 | 1.32E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89134360 | rs1956411 | C | T | rs1956411 | 19571809 | 4.41E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89203781 | rs10132509 | A | G | rs10132509 | 19571809 | 7.27E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89218538 | rs10140896 | C | A,G | rs10140896 | 19571809 | 9.49E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89218815 | rs12880096 | T | C | rs12880096 | 19571809 | 9.28E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89228569 | rs7147796 | C | G | rs7147796 | 19571809 | 3.50E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89276431 | rs11845781 | C | T | rs11845781 | 19571809 | 9.94E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 89803269 | rs3783853 | A | G | rs3783853 | 21926974 | 5.83E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 14 | 91820675 | rs12589229 | C | T | rs12589229 | 22037555 | 2.42E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | CCDC88C |
| 14 | 92279983 | rs17127600 | T | G | rs17127600 | pha002857 | 2.74E-05 | phs000021 | 1.37 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | TC2N | intron | NM_152332 |
| 14 | 95415113 | rs8019257 | G | C | rs8019257 | pha002859 | 8.50E-05 | phs000021 | 1.64 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 14 | 95441562 | rs7154873 | A | G | rs7154873 | 19197363 | 5.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 14 | 95663986 | rs1187628 | C | T | rs1187628 | 22440650 | 0.000375 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | CLMN |
| 14 | 98170611 | rs721919 | C | T | rs721919 | 21674006 | 7.89E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 14 | 103304425 | rs7143963 | C | T | rs7143963 | 19023125 | 7.46E-05 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 14 | 103377321 | rs10133111 | G | A | rs10133111 | 19023125 | 5.00E-06 | NA | NA | NA | 64 cases; 74 cases | NOPOP(138) | ALL(138) | NOPOP(138) | ALL(138) | Brain imaging in schizophrenia (interaction) | HPOID:0007319 | HPOID:0100753 | Morphological abnormality of the central nervous system | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 24369643 | rs1110961 | T | C | rs1110961 | 19197363 | 4.86E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 24485160 | rs2007159 | G | A | rs2007159 | 19197363 | 6.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | NA |
| 15 | 26282791 | rs4243761 | G | T | rs4243761 | 22648509 | 6.37E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 15 | 26618949 | rs8035991 | C | T | rs8035991 | 21926974 | 9.27E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 26867409 | rs2873027 | C | T | rs2873027 | 19197363 | 4.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 26867573 | rs2315906 | A | G | rs2315906 | 19197363 | 4.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 30260500 | rs2222420 | A | G | rs2222420 | 22037555 | 6.52E-06 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 15 | 31444770 | rs1580141 | A | G | rs1580141 | 19197363 | 2.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A,G |
| 15 | 31691053 | rs753636 | G | A | rs753636 | 19197363 | 5.48E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 33500065 | rs4780094 | G | A | rs4780094 | 19197363 | 4.76E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 33735116 | rs16970977 | T | C | rs16970977 | 19571809 | 8.56E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 33779491 | rs2572169 | T | C | rs2572169 | 20889312 | 1.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 33880181 | rs658750 | G | A | rs658750 | 24253340 | 4.76E-05 | NA | 1.27 | [1.12-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 36312948 | rs10520043 | G | A | rs10520043 | 21674006 | 6.67E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 15 | 36553907 | rs1517867 | G | C | rs1517867 | 21674006 | 6.44E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 15 | 37847632 | rs8036621 | A | C | rs8036621 | 19197363 | 2.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 38941557 | rs1004496 | C | A | rs1004496 | 20889312 | 8.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 38943137 | rs10852029 | G | A | rs10852029 | 20889312 | 2.38E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 38991456 | rs1495186 | G | A | rs1495186 | 20889312 | 3.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 38999048 | rs903530 | G | A | rs903530 | 20889312 | 6.97E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 39003763 | rs2643217 | C | T | rs2643217 | 20889312 | 6.00E-06 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 39194778 | rs11073362 | G | A | rs11073362 | 20889312 | 9.49E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 39396761 | rs724729 | C | T | rs724729 | 23637625 | 0.000047 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 40595627 | rs1869901 | G | A | rs1869901 | 21926974 | 3.00E-06 | NA | 1.07 | [1.04-1.09] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 40595627 | rs1869901 | G | A | rs1869901 | 23637625 | 0.000203 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 46700711 | rs2062308 | C | T | rs2062308 | 20889312 | 2.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 46703608 | rs1385073 | A | G | rs1385073 | 20889312 | 4.06E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 46706608 | rs11070519 | G | A | rs11070519 | 20889312 | 5.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 46712299 | rs11853849 | C | T | rs11853849 | 20889312 | 7.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 46715957 | rs10431772 | G | C | rs10431772 | 20889312 | 5.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 48670608 | rs1426721 | C | A | rs1426721 | 20832056 | 3.84E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 15 | 48676490 | rs9635332 | G | C | rs9635332 | 20832056 | 2.95E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 15 | 48944272 | rs2289136 | G | A | rs2289136 | 19571808 | 5.10E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 52601189 | rs1045700 | C | T | rs1045700 | 19197363 | 6.94E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 52655366 | rs3794565 | A | G | rs3794565 | 20889312 | 2.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 55175902 | rs10162662 | C | A | rs10162662 | 19571811 | 3.17E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 15 | 55352945 | rs1528462 | C | T | rs1528462 | 22883433 | 5.80E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 55894558 | rs7175728 | C | T | rs7175728 | 19197363 | 2.79E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 59425158 | rs901478 | G | A | rs901478 | 19197363 | 8.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 59719169 | rs28890483 | A | G | rs28890483 | 20889312 | 9.00E-06 | NA | 1.39 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 59736724 | rs4592597 | C | T | rs4592597 | 20889312 | 6.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 61103590 | rs341366 | A | G | rs341366 | 22883433 | 3.73E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 61109318 | rs2414681 | C | A | rs2414681 | 22883433 | 5.00E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 61109873 | rs10519074 | C | A | rs10519074 | 22883433 | 1.54E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 61114104 | rs7169281 | T | C | rs7169281 | 22883433 | 2.95E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 15 | 61124838 | rs8041061 | G | T | rs8041061 | 22883433 | 1.64E-07 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 61124953 | rs8042149 | T | G | rs8042149 | 22883433 | 2.49E-08 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 61126859 | rs4775301 | T | C | rs4775301 | 22883433 | 4.59E-07 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 61130639 | rs8024133 | C | T | rs8024133 | 22883433 | 8.77E-07 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 61131683 | rs11071561 | T | A | rs11071561 | 22883433 | 3.81E-06 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 61132845 | rs341401 | G | A | rs341401 | 22883433 | 6.20E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 61336442 | rs7172342 | C | G | rs7172342 | 23212062 | 4.00E-06 | Negative/disorganized symptoms | 0.08 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 15 | 61336628 | rs4774384 | C | T | rs4774384 | 24043878 | 4.42E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4774384-T | Research Support, Non-U.S. Gov't | C | RORA |
| 15 | 61840103 | rs4775413 | C | T | rs4775413 | 21926974 | 2.00E-06 | NA | 1.08 | [1.04-1.11] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 61840103 | rs4775413 | C | T | rs4775413 | 24043878 | 1.79E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4775413-T | Research Support, Non-U.S. Gov't | C | NA |
| 15 | 61863133 | rs2414718 | G | A | rs2414718 | 23637625 | 0.0000459 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 61870943 | rs12592967 | C | T | rs12592967 | 22688191 | 3.00E-07 | NA | 1.1 | NA | 2,111 European ancestry schizophrenia cases; 2,535 European ancestry controls | European(4646) | ALL(4646) | EUR(4646) | ALL(4646) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 62204714 | rs11637606 | A | C | rs11637606 | 20889312 | 5.54E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 62253791 | rs2303405 | T | C | rs2303405 | 20889312 | 3.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 62312840 | rs4143844 | A | C | rs4143844 | 20889312 | 4.00E-06 | NA | 1.43 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 62312840 | rs4143844 | A | C | rs4143844 | pha002857 | 4.93E-05 | phs000021 | 1.07 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | VPS13C | intron | NM_018080 |
| 15 | 62501627 | rs12592154 | G | A | rs12592154 | 20832056 | 3.87E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 15 | 62676125 | rs289101 | G | A | rs289101 | 21926974 | 2.86E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 62795684 | rs1194922 | G | A | rs1194922 | 19571811 | 7.52E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 15 | 68471891 | rs10152713 | C | T | rs10152713 | 20889312 | 8.51E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 69625270 | rs12905214 | G | A | rs12905214 | 19571809 | 3.35E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 69650053 | rs11072089 | C | T | rs11072089 | 20889312 | 3.00E-06 | NA | 1.89 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 69696249 | rs1394415 | T | C | rs1394415 | 19197363 | 4.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 69703848 | rs2134926 | T | C | rs2134926 | 19197363 | 4.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 69717036 | rs11072096 | G | A | rs11072096 | 19197363 | 5.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 69728949 | rs3825858 | A | G | rs3825858 | 19197363 | 3.47E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 73007893 | rs730180 | G | A | rs730180 | 23358160 | 3.78E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 77391603 | rs12899474 | C | T | rs12899474 | 22440650 | 0.00016 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 15 | 78344922 | rs4886554 | G | A | rs4886554 | 21926974 | 8.86E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 79508010 | rs16970717 | A | G | rs16970717 | 19571809 | 8.33E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 80339456 | rs7164805 | G | A | rs7164805 | 19197363 | 7.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 82333168 | rs16973319 | T | G | rs16973319 | 21926974 | 6.18E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 15 | 82370616 | rs2665095 | T | C | rs2665095 | 19197363 | 3.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 84274980 | rs1896796 | A | G | rs1896796 | 22440650 | 0.000171 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | SH3GL3 |
| 15 | 84706461 | rs950169 | C | T | rs950169 | 19197363 | 3.14E-07 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 84707851 | rs2135551 | A | G | rs2135551 | 19197363 | 1.35E-07 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 84787635 | rs1911155 | A | G | rs1911155 | 19197363 | 4.18E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 84958318 | rs12910334 | G | A | rs12910334 | 19197363 | 2.87E-06 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 85165699 | rs11635597 | C | T | rs11635597 | 19197363 | 1.83E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 85200520 | rs1051168 | G | T | rs1051168 | 23637625 | 0.000127 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 85200754 | rs2292462 | G | T | rs2292462 | 19197363 | 7.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 85280864 | rs10220733 | G | A | rs10220733 | 19197363 | 5.40E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 85328352 | rs3748376 | C | T | rs3748376 | 19197363 | 5.64E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 85330745 | rs10438428 | C | T | rs10438428 | 19197363 | 5.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 86075747 | rs4843067 | G | A | rs4843067 | 20889312 | 9.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 86921095 | rs10520624 | C | A,G,T | rs10520624 | 21674006 | 5.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | AGBL1 |
| 15 | 86984240 | rs16977195 | A | G | rs16977195 | 18347602 | 2.00E-06 | 6.01 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | A | |
| 15 | 87139933 | rs4393536 | T | C | rs4393536 | 20832056 | 3.48E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | AGBL1 |
| 15 | 88322461 | rs16940789 | G | A | rs16940789 | 19571809 | 7.20E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88327131 | rs1986826 | T | C | rs1986826 | 19571809 | 1.57E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88341400 | rs4887326 | A | G | rs4887326 | 19571809 | 2.68E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88345483 | rs7166186 | A | T | rs7166186 | 19571809 | 5.34E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88366975 | rs4243096 | T | C | rs4243096 | 19571809 | 3.89E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88468931 | rs1078163 | T | C | rs1078163 | 21926974 | 5.14E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 88468931 | rs1078163 | T | C | rs1078163 | 23637625 | 0.0000267 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 88655520 | rs16941261 | G | C | rs16941261 | 19571809 | 8.10E-07 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88659906 | rs11631112 | G | T | rs11631112 | 19571809 | 1.04E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88660115 | rs4887364 | T | C | rs4887364 | 19571809 | 3.95E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88661632 | rs11630338 | T | C | rs11630338 | 19571809 | 7.60E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88662946 | rs991728 | C | G | rs991728 | 19571809 | 5.07E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88664676 | rs2114252 | C | A | rs2114252 | 19571809 | 1.61E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88666646 | rs994068 | G | C | rs994068 | 19571809 | 1.29E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 88688010 | rs3784405 | T | C | rs3784405 | 19571809 | 6.97E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 15 | 91426560 | rs4702 | G | A | rs4702 | 19571808 | 2.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 92319918 | rs4572364 | G | A | rs4572364 | 19197363 | 3.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 15 | 92445873 | rs3924426 | T | C | rs3924426 | 18521091 | 2.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs3924426-T | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 15 | 93214129 | rs12898781 | T | G | rs12898781 | 21688384 | 9.56E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 15 | 94741598 | rs6497177 | T | G | rs6497177 | 19197363 | 1.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 15 | 95382263 | rs10520769 | C | T | rs10520769 | 19197363 | 8.04E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 15 | 95416314 | rs11639294 | C | T | rs11639294 | 22440650 | 0.000818 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 15 | 96047157 | rs8027583 | C | G | rs8027583 | 20889312 | 5.98E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 96371724 | rs16975679 | C | G | rs16975679 | 20832056 | 4.62E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 15 | 98494478 | rs12443391 | G | T | rs12443391 | 19571811 | 2.04E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 15 | 98672060 | rs7171849 | C | A | rs7171849 | 20889312 | 8.44E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 99710381 | rs1530920 | G | C | rs1530920 | 19850283 | 4.75E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 15 | 100759884 | rs4965599 | C | G | rs4965599 | 20889312 | 4.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 15 | 100793347 | rs7171129 | T | C | rs7171129 | 20832056 | 5.01E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C,T | ADAMTS17 |
| 16 | 319511 | rs739999 | A | G | rs739999 | 20185149 | 4.30E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 16 | 4500544 | rs2304634 | C | T | rs2304634 | 23637625 | 0.000079 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 16 | 4586222 | rs3747600 | A | G | rs3747600 | 21791550 | 3.20E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 16 | 4586222 | rs3747600 | A | G | rs3747600 | 21926974 | 3.00E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 5856151 | rs1865818 | G | A,C | rs1865818 | 21674006 | 4.35E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 16 | 6291019 | rs13336322 | G | A,C | rs13336322 | 20889312 | 7.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 7631319 | rs17144183 | A | G | rs17144183 | 19571811 | 5.83E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | RBFOX1 |
| 16 | 7745047 | rs8055404 | A | G | rs8055404 | 20889312 | 5.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 7753704 | rs12444931 | G | A | rs12444931 | 20889312 | 5.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 7753761 | rs12448737 | T | A,C,G | rs12448737 | 20889312 | 5.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 9083367 | rs9927946 | T | C | rs9927946 | 19571809 | 1.70E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 9627486 | rs8060304 | T | C | rs8060304 | 24253340 | 5.63E-05 | NA | 1.27 | [1.13-1.42] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 16 | 12077632 | rs12922317 | A | G | rs12922317 | 23358160 | 9.00E-07 | NA | 1.17 | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12922317-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 13061611 | rs7192086 | T | A | rs7192086 | 18677311 | 6.00E-06 | 1.12 | NA | 479 cases; 2,937 controls | NOPOP(3416) | ALL(3416) | NOPOP(3416) | ALL(3416) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs7192086-T | Meta-Analysis | Research Support, Non-U.S. Gov't | A | |
| 16 | 13061611 | rs7192086 | T | A | rs7192086 | 22479419 | 6.10E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SHISA9 |
| 16 | 13777395 | rs12448623 | T | G | rs12448623 | 19197363 | 8.10E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 13795867 | rs4238620 | T | C | rs4238620 | 19197363 | 7.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 16 | 16272508 | rs2283508 | G | A | rs2283508 | 19571808 | 4.00E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 16 | 18856299 | rs2650618 | T | C | rs2650618 | 21926974 | 7.69E-09 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 19916895 | rs9941245 | T | G | rs9941245 | 20185149 | 9.99E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 16 | 20276957 | rs7191525 | T | G | rs7191525 | 19571809 | 7.33E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 20288797 | rs6497465 | G | A | rs6497465 | 19571809 | 2.71E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 20288797 | rs6497465 | G | A | rs6497465 | pha002859 | 5.82E-05 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| 16 | 20290454 | rs8054898 | T | C | rs8054898 | 19571809 | 3.02E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 20290454 | rs8054898 | T | C | rs8054898 | pha002859 | 5.82E-05 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| 16 | 20674492 | rs151222 | G | C | rs151222 | 18347602 | 6.00E-06 | 2.1 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | G | |
| 16 | 20680206 | rs433598 | C | T | rs433598 | 20185149 | 3.00E-06 | NA | 1.13 | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs433598-T | Research Support, Non-U.S. Gov't | T |
| 16 | 20680206 | rs433598 | C | T | rs433598 | 22479419 | 3.30E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | ACSM1 |
| 16 | 20682354 | rs396508 | A | G | rs396508 | 20185149 | 2.93E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 16 | 22833027 | rs460473 | G | A | rs460473 | 19850283 | 1.03E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A,G |
| 16 | 23062681 | rs6497643 | T | C | rs6497643 | 20832056 | 2.75E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 16 | 26872744 | rs6497965 | A | G | rs6497965 | 20889312 | 5.75E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 29988941 | rs4583255 | A | G | rs4583255 | 21791550 | 1.90E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 16 | 49958723 | rs2058809 | T | C | rs2058809 | 20889312 | 8.33E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 50048951 | rs7204814 | A | G | rs7204814 | 19197363 | 6.62E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 50113773 | rs8051216 | C | T | rs8051216 | 19197363 | 5.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 16 | 50118245 | rs877639 | G | A | rs877639 | 19197363 | 7.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 50523194 | rs8044151 | G | A | rs8044151 | 19571809 | 5.14E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 50905010 | rs1496647 | A | C | rs1496647 | 19197363 | 4.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 53639438 | rs3213758 | C | T | rs3213758 | 19197363 | 1.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
| 16 | 53730602 | rs12598253 | A | G | rs12598253 | 19197363 | 8.55E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 53748969 | rs12447481 | T | G | rs12447481 | 19197363 | 5.14E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 54097159 | rs2689247 | C | T | rs2689247 | 19571809 | 7.37E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 54213541 | rs836994 | C | T | rs836994 | 20889312 | 2.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 54355601 | rs8056104 | T | G | rs8056104 | 19197363 | 7.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 16 | 55214093 | rs728571 | C | T | rs728571 | 19197363 | 3.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 57024317 | rs17290922 | G | C | rs17290922 | 23212062 | 8.00E-06 | Mood symptoms | 0.13 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 16 | 57058582 | rs821470 | A | G | rs821470 | 22688191 | 3.00E-06 | NA | 1.25 | NA | 2,111 European ancestry schizophrenia cases; 836 European ancestry bipolar disorder cases; 2,535 European ancestry controls | European(5482) | ALL(5482) | EUR(5482) | ALL(5482) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 62336454 | rs10500464 | C | T | rs10500464 | 23358160 | 9.62E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 66476944 | rs7198295 | C | T | rs7198295 | 19571811 | 1.11E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | BEAN1 |
| 16 | 66527859 | rs16956585 | C | T | rs16956585 | 20889312 | 6.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 66599791 | rs16956732 | G | A | rs16956732 | 21926974 | 5.80E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 68379860 | rs8058517 | C | T | rs8058517 | pha002859 | 8.82E-05 | phs000021 | 1.34 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | PRMT7 | intron | NM_001184824 |
| 16 | 68600351 | rs17689437 | C | T | rs17689437 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | ZFP90 |
| 16 | 72782824 | rs292932 | A | G | rs292932 | 21674006 | 5.79E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 16 | 74873513 | rs725710 | C | A | rs725710 | 19197363 | 3.30E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 77111576 | rs284939 | G | A | rs284939 | 23212062 | 1.12E-05 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 16 | 77112564 | rs285001 | T | G | rs285001 | 23212062 | 1.11E-05 | NA | NA | NA | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 16 | 77916191 | rs435746 | T | A | rs435746 | 20889312 | 3.00E-06 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 77923069 | rs442307 | T | C | rs442307 | 20889312 | 3.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 77926130 | rs440488 | A | G | rs440488 | 20889312 | 7.98E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 78569957 | rs17706989 | C | G | rs17706989 | 21107309 | 1.00E-06 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | WWOX |
| 16 | 78805763 | rs4888846 | A | T | rs4888846 | 20832056 | 2.27E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | WWOX |
| 16 | 78807770 | rs17709200 | A | G | rs17709200 | 20832056 | 4.86E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | WWOX |
| 16 | 78808383 | rs9929519 | C | A | rs9929519 | 20832056 | 1.90E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | WWOX |
| 16 | 78809124 | rs17642004 | G | A | rs17642004 | 20832056 | 3.73E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | WWOX |
| 16 | 79176337 | rs7200634 | A | C | rs7200634 | 19571809 | 4.15E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 79176337 | rs7200634 | A | C | rs7200634 | pha002859 | 7.11E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | WWOX | intron | NM_016373 |
| 16 | 80303130 | rs11150256 | G | A | rs11150256 | 19197363 | 2.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 80770289 | rs2316576 | A | T | rs2316576 | 19571811 | 9.13E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | CDYL2 |
| 16 | 81825054 | rs12598194 | C | T | rs12598194 | 20889312 | 1.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 82692812 | rs8057927 | T | C | rs8057927 | 23358160 | 1.00E-06 | NA | 1.34 | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs8057927-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 16 | 82864466 | rs2156 | A | C | rs2156 | 20889312 | 7.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 82896849 | rs16958782 | G | A | rs16958782 | 20889312 | 3.74E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 16 | 83346679 | rs747674 | T | C | rs747674 | 20185149 | 6.01E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 16 | 83373963 | rs10514574 | A | C | rs10514574 | 20185149 | 7.20E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 16 | 83375258 | rs17211336 | A | G | rs17211336 | 20185149 | 6.28E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 16 | 83569881 | rs4238691 | G | A | rs4238691 | 19571809 | 8.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 83569881 | rs4238691 | G | A | rs4238691 | pha002859 | 5.55E-05 | phs000021 | 1.47 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | CDH13 | intron | NM_001257 |
| 16 | 83589489 | rs9930750 | C | T | rs9930750 | 19571809 | 3.27E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 83589489 | rs9930750 | C | T | rs9930750 | pha002859 | 3.14E-05 | phs000021 | 1.43 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | CDH13 | intron | NM_001257 |
| 16 | 83591217 | rs4357934 | C | G | rs4357934 | 19571809 | 2.95E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 16 | 83591217 | rs4357934 | C | G | rs4357934 | pha002859 | 2.19E-05 | phs000021 | 1.43 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | CDH13 | intron | NM_001257 |
| 16 | 84305216 | rs12598746 | G | A | rs12598746 | 23358160 | 6.13E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 16 | 86629376 | rs4843177 | A | G | rs4843177 | 19571811 | 4.00E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 16 | 86751195 | rs299995 | A | G | rs299995 | 19197363 | 2.21E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 86761699 | rs299977 | T | C | rs299977 | 19197363 | 5.16E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 16 | 86781497 | rs2059285 | G | A | rs2059285 | 19197363 | 7.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 16 | 87180078 | rs8052172 | C | T | rs8052172 | 21688384 | 6.50E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 16 | 87182096 | rs12597955 | G | T | rs12597955 | 21688384 | 9.65E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 16 | 87187454 | rs17836231 | C | G | rs17836231 | 21688384 | 7.53E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 16 | 87188106 | rs8052505 | T | C | rs8052505 | 21688384 | 6.62E-06 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 16 | 87461969 | rs9646303 | G | A | rs9646303 | 22479419 | 6.42E-06 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | ZCCHC14 |
| 16 | 89371839 | rs2277908 | G | A | rs2277908 | pha002859 | 3.47E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | ANKRD11 | intron | NM_013275 |
| 17 | 258914 | rs9895447 | G | A | rs9895447 | 22883433 | 1.12E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 259248 | rs71355256 | C | T | rs71355256 | 22883433 | 4.28E-06 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 17 | 266655 | rs67288608 | G | C | rs67288608 | 22883433 | 1.16E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 273298 | rs6565727 | G | A | rs6565727 | 22883433 | 1.32E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 2208899 | rs4523957 | G | T | rs4523957 | 23974872 | 6.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4523957-T | Research Support, N.I.H., Extramural |
| 17 | 5892651 | rs7225604 | T | C | rs7225604 | 19197363 | 6.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 17 | 7539866 | rs1641544 | T | C | rs1641544 | 19197363 | 6.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 8905016 | rs7219148 | T | G | rs7219148 | 22883433 | 5.06E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 9606330 | rs407454 | T | C | rs407454 | 19197363 | 3.90E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 17 | 10231417 | rs2277644 | C | T | rs2277644 | 22648509 | 1.18E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 17 | 10234591 | rs17208457 | C | T | rs17208457 | 22648509 | 5.70E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 17 | 13027868 | rs16947205 | T | G | rs16947205 | 20889312 | 5.98E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 13028293 | rs16947215 | A | C | rs16947215 | 20889312 | 2.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 13201543 | rs8080564 | G | A | rs8080564 | 23358160 | 3.31E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 13500604 | rs726800 | A | G | rs726800 | 19571809 | 3.24E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 17 | 13500604 | rs726800 | A | G | rs726800 | pha002859 | 4.58E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | HS3ST3A1 | intron | NM_006042 |
| 17 | 13706283 | rs8080388 | T | G | rs8080388 | 19197363 | 3.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,G |
| 17 | 13734612 | rs12150192 | C | T | rs12150192 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 17 | 14358778 | rs9912653 | C | G | rs9912653 | 20832056 | 3.20E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 17 | 14358778 | rs9912653 | C | G | rs9912653 | 22648509 | 3.81E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 17 | 17001291 | rs12603417 | T | C | rs12603417 | 20889312 | 4.40E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 17085409 | rs7218781 | C | A | rs7218781 | 20889312 | 8.38E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 26127518 | rs10459953 | C | G | rs10459953 | 19850283 | 1.27E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 17 | 26686445 | rs17802736 | A | G | rs17802736 | 22883433 | 9.68E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 17 | 31358083 | rs8074010 | A | G | rs8074010 | 19197363 | 5.35E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 17 | 31659032 | rs76604546 | T | A | rs76604546 | 22883433 | 7.18E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 17 | 32288468 | rs9907580 | T | C | rs9907580 | 19197363 | 2.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 17 | 32312132 | rs16969071 | T | C | rs16969071 | 20889312 | 7.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 32315968 | rs9912758 | T | A | rs9912758 | 20889312 | 7.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 33139508 | rs17544975 | G | A | rs17544975 | 20889312 | 3.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 35214519 | rs9889432 | C | A | rs9889432 | 24253340 | 9.15E-05 | NA | 1.49 | [1.21-1.83] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 17 | 36026335 | rs6607284 | C | T | rs6607284 | 20889312 | 7.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 36026401 | rs7211602 | C | A | rs7211602 | 20889312 | 7.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39225742 | rs8080054 | A | C | rs8080054 | 20889312 | 1.03E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39228142 | rs6503586 | C | T | rs6503586 | 20889312 | 6.59E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39230058 | rs3914090 | T | A | rs3914090 | 20889312 | 2.25E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39235235 | rs2173202 | T | C | rs2173202 | 20889312 | 3.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39235389 | rs6416909 | G | A | rs6416909 | 20889312 | 1.39E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39235453 | rs6503588 | A | G | rs6503588 | 20889312 | 1.77E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39235917 | rs1848812 | C | T | rs1848812 | 20889312 | 7.77E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39235963 | rs1848811 | A | G | rs1848811 | 20889312 | 8.79E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39236452 | rs1510075 | G | A | rs1510075 | 20889312 | 6.22E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39238382 | rs2874201 | C | T | rs2874201 | 20889312 | 1.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39239467 | rs439075 | T | G | rs439075 | 20889312 | 8.75E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39241489 | rs9895828 | C | G | rs9895828 | 20889312 | 4.36E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39250639 | rs4006360 | C | T | rs4006360 | 20889312 | 4.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39251266 | rs2320221 | G | T | rs2320221 | 20889312 | 1.46E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39302683 | rs917635 | G | A | rs917635 | 20889312 | 8.84E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 39638907 | rs9303309 | C | T | rs9303309 | 21674006 | 8.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | KRT35 |
| 17 | 39934077 | rs11650969 | T | G | rs11650969 | 19197363 | 3.58E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 17 | 43096229 | rs2337437 | G | T | rs2337437 | 19197363 | 8.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 45985414 | rs7207225 | A | G | rs7207225 | 21674006 | 8.12E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | SP2 |
| 17 | 46840541 | rs7219021 | T | G | rs7219021 | 24280982 | 1.00E-07 | (SCZ vs. BP) | NA | NA | up to 4,045 European ancestry schizophrenia cases; up to 5,324 schizophrenia cases; up to 7,362 European ancestry bipolar disorder cases; up to 3,048 bipolar disorder cases; up to 11,180 European ancestry controls; up to 8,243 controls | NOPOP(16615) | European(22587) | ALL(39202) | NOPOP(16615) | EUR(22587) | ALL(39202) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 |
| 17 | 50628256 | rs2874120 | C | T | rs2874120 | 20889312 | 3.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 50628985 | rs952258 | G | C | rs952258 | 20889312 | 2.11E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 50653210 | rs349947 | T | C | rs349947 | 20889312 | 4.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 50671032 | rs349914 | C | A | rs349914 | 20889312 | 5.75E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 55198248 | rs15944 | A | T | rs15944 | 20889312 | 5.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 55507199 | rs12603207 | G | A | rs12603207 | 21688384 | 1.46E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | MSI2 |
| 17 | 55522855 | rs11657292 | T | C | rs11657292 | 22037552 | 1.00E-04 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | MSI2 |
| 17 | 56380471 | rs6503858 | T | C | rs6503858 | 22440650 | 0.000559 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | BZRAP1 |
| 17 | 60981969 | rs9892593 | A | G | rs9892593 | 21747397 | 2.90E-06 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 62044208 | rs4968678 | A | G | rs4968678 | 22440650 | 6.35E-08 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | SCN4A |
| 17 | 64917033 | rs17645023 | A | T | rs17645023 | 21057379 | 6.00E-07 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 66382209 | rs11655081 | T | C | rs11655081 | pha002857 | 5.18E-05 | phs000021 | 1.65 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | ARSG | intron | NM_014960 |
| 17 | 68539112 | rs1817630 | G | A | rs1817630 | 22648509 | 7.67E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 17 | 68878487 | rs1015657 | A | G | rs1015657 | 22648509 | 2.00E-06 | NA | 1.32 | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 17 | 68908290 | rs33962851 | C | G | rs33962851 | 20889312 | 2.07E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 69436277 | rs2215060 | T | C | rs2215060 | 19197363 | 4.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 17 | 70023827 | rs12451606 | T | C | rs12451606 | 20889312 | 7.20E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 70025713 | rs2193055 | T | G | rs2193055 | 20889312 | 2.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 72042737 | rs11077721 | G | A | rs11077721 | 22037552 | 1.47E-06 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 17 | 72048075 | rs6501685 | C | T | rs6501685 | 19571811 | 6.12E-06 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 17 | 73120928 | rs750844 | G | A | rs750844 | 19571811 | 4.58E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | ARMC7 |
| 17 | 74003846 | rs7342883 | G | A | rs7342883 | 23358160 | 1.44E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 17 | 75609112 | rs2077252 | G | A | rs2077252 | 19197363 | 8.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 17 | 76092553 | rs2311001 | G | C | rs2311001 | 24043878 | 3.14E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2311001-C | Research Support, Non-U.S. Gov't | G | TNRC6C |
| 17 | 76781936 | rs2010806 | A | T | rs2010806 | 19850283 | 3.56E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 17 | 77753485 | rs3751954 | A | G | rs3751954 | 19571809 | 4.59E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 17 | 77753485 | rs3751954 | A | G | rs3751954 | pha002859 | 9.51E-06 | phs000021 | 1.89 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | CBX2 | intron | NM_005189 |
| 17 | 79265701 | rs8076302 | C | T | rs8076302 | 20889312 | 5.73E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 80779610 | rs11658083 | C | T | rs11658083 | 22648509 | 7.01E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 17 | 80790442 | rs3744165 | T | G | rs3744165 | 22037552 | 1.00E-04 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | ZNF750 |
| 17 | 80887206 | rs729124 | A | G | rs729124 | 20889312 | 3.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 17 | 80897492 | rs8073471 | A | G | rs8073471 | 22037552 | 1.00E-04 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G,A | TBCD |
| 18 | 2481917 | rs16943313 | G | A | rs16943313 | 21688384 | 2.61E-04 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 18 | 3282219 | rs1791111 | G | A | rs1791111 | 19197363 | 7.01E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 3319915 | rs1662813 | C | T | rs1662813 | 19197363 | 4.61E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 4592823 | rs2847108 | T | C | rs2847108 | 19197363 | 5.18E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 7392667 | rs8091331 | A | G | rs8091331 | 21926974 | 2.04E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 8364598 | rs2169014 | T | C | rs2169014 | 19197363 | 5.66E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 8391829 | rs656068 | A | G | rs656068 | 19197363 | 8.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 8408431 | rs635269 | G | A | rs635269 | 19197363 | 8.96E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 9246896 | rs6506648 | G | A | rs6506648 | 19197363 | 8.42E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 9248150 | rs1893198 | T | C | rs1893198 | 19197363 | 9.51E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 9274636 | rs8092135 | A | G | rs8092135 | 19197363 | 6.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 10698511 | rs10502404 | A | G | rs10502404 | 21674006 | 5.56E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | PIEZO2 |
| 18 | 11494199 | rs1455244 | T | C | rs1455244 | 23212062 | 3.00E-06 | Negative/disorganized symptoms | 0.06 | [NA] unit decrease | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 18 | 12736556 | rs1893213 | G | A | rs1893213 | 19197363 | 7.31E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 21928041 | rs1532010 | G | T | rs1532010 | 24253340 | 3.49E-06 | NA | 1.7 | [1.37-2.12] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 22576025 | rs1941611 | A | G | rs1941611 | 19197363 | 7.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 22607723 | rs4800613 | G | A | rs4800613 | 19197363 | 2.51E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 22632927 | rs9963409 | C | T | rs9963409 | 19197363 | 4.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 22639237 | rs5022348 | C | T | rs5022348 | 19197363 | 3.33E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 24687347 | rs7240658 | T | A | rs7240658 | 19571809 | 7.35E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 24689706 | rs919140 | G | C | rs919140 | 19571809 | 8.31E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 25251682 | rs16943957 | C | T | rs16943957 | 19571809 | 5.35E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 25673875 | rs528438 | C | T | rs528438 | 19197363 | 7.85E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 26043003 | rs12966353 | A | C | rs12966353 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 26090998 | rs9953932 | A | G | rs9953932 | 19197363 | 2.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 28197518 | rs2542754 | A | G | rs2542754 | 23358160 | 5.77E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 32240008 | rs12956631 | C | T | rs12956631 | 20889312 | 3.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 32304323 | rs995164 | C | A | rs995164 | 20889312 | 1.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34058015 | rs9950563 | A | C | rs9950563 | 20889312 | 6.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34116553 | rs12963694 | A | C | rs12963694 | 20889312 | 9.54E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34119428 | rs1390431 | C | T | rs1390431 | 20889312 | 2.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34870751 | rs894775 | T | C | rs894775 | 20889312 | 9.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34872741 | rs7241842 | T | C | rs7241842 | 19571809 | 1.98E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 34875735 | rs4799910 | C | G | rs4799910 | 20889312 | 3.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34876792 | rs1893455 | G | A | rs1893455 | 20889312 | 2.78E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 34917023 | rs11082000 | G | A | rs11082000 | 19197363 | 8.87E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 34928639 | rs4799915 | C | T | rs4799915 | 18521091 | 3.00E-06 | NA | NA | 183 individuals | NOPOP(183) | ALL(183) | NOPOP(183) | ALL(183) | Response to iloperidone treatment (QT prolongation) | HPOID:0001657 | Prolonged QT interval | DOID:5419 | schizophrenia | D008133 | Long QT Syndrome | NA | NA | Schizophrenia | rs4799915-T | Multicenter Study | Research Support, Non-U.S. Gov't | Clinical Trial, Phase III | |
| 18 | 35336508 | rs1346282 | C | T | rs1346282 | 21674006 | 5.60E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 18 | 38227098 | rs2469875 | A | G | rs2469875 | 19571809 | 8.69E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 39325813 | rs16975252 | G | A | rs16975252 | 20889312 | 9.36E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 42090667 | rs2048485 | C | T | rs2048485 | 22885689 | 8.00E-06 | EA | 1.4 | NA | 1,218 European ancestry cases; 990 European ancestry controls; 139 cases; 114 controls | NOPOP(253) | European(2208) | ALL(2461) | NOPOP(253) | EUR(2208) | ALL(2461) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 42134447 | rs1983249 | A | G | rs1983249 | 23358160 | 6.72E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 43436221 | rs518464 | T | C | rs518464 | 21688384 | 1.72E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | EPG5 |
| 18 | 43593870 | rs4890614 | A | G | rs4890614 | pha002859 | 6.88E-05 | phs000021 | 1.3 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | PSTPIP2 | intron | NM_024430 |
| 18 | 45881487 | rs9953229 | C | T | rs9953229 | 19197363 | 8.80E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 45902342 | rs1873126 | T | C | rs1873126 | 19197363 | 1.97E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 45907944 | rs4258691 | G | A | rs4258691 | 19197363 | 3.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 45923445 | rs8087061 | G | T | rs8087061 | 19197363 | 3.94E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 46221152 | rs8089264 | C | T | rs8089264 | 20889312 | 5.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 46371993 | rs4939821 | C | T | rs4939821 | 21926974 | 5.56E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 47503579 | rs4939924 | C | T | rs4939924 | 22037552 | 1.19E-05 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | MYO5B |
| 18 | 50158120 | rs7231528 | T | C | rs7231528 | 19571809 | 6.44E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 51183679 | rs4347699 | G | A | rs4347699 | 20889312 | 4.82E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 51192592 | rs1811441 | A | G | rs1811441 | 19571811 | 2.24E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| 18 | 51403368 | rs16957445 | C | T | rs16957445 | 21926974 | 8.16E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 52750469 | rs4309482 | A | G | rs4309482 | 19197363 | 6.45E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 52750469 | rs4309482 | A | G | rs4309482 | 21747397 | 9.68E-07 | NA | NA | NA | 1,169 European ancestry cases; 3,714 European ancestry controls | European(4883) | ALL(4883) | EUR(4883) | ALL(4883) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 52750469 | rs4309482 | A | G | rs4309482 | 21791550 | 7.80E-09 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 18 | 52750469 | rs4309482 | A | G | rs4309482 | 23164818 | 0.000017 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 18 | 52752017 | rs12966547 | G | A | rs12966547 | 21926974 | 3.00E-08 | NA | 1.4 | [1.28-1.52] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12966547-G | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 52752017 | rs12966547 | G | A | rs12966547 | 23637625 | 0.00000623 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 52752700 | rs4801131 | C | T | rs4801131 | 23974872 | 1.00E-08 | NA | 1.08 | [1.05-1.11] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4801131-C | Research Support, N.I.H., Extramural |
| 18 | 52949657 | rs1261117 | T | C | rs1261117 | 23894747 | 3.00E-10 | EA | 1.6 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs1261117-T | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 18 | 53049212 | rs9646596 | G | A | rs9646596 | 22479419 | 2.60E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TCF4 |
| 18 | 53058238 | rs17594526 | C | T | rs17594526 | 19571811 | 1.00E-07 | NA | 1.44 | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs17594526-T | NA | C | TCF4 |
| 18 | 53058238 | rs17594526 | C | T | rs17594526 | 22479419 | 1.30E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | TCF4 |
| 18 | 53063719 | rs17594665 | G | A | rs17594665 | 22479419 | 1.60E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TCF4 |
| 18 | 53065892 | rs17594721 | A | G | rs17594721 | 22479419 | 3.70E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TCF4 |
| 18 | 53066328 | rs11152369 | A | C | rs11152369 | 22479419 | 2.00E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TCF4 |
| 18 | 53067184 | rs17509991 | G | A | rs17509991 | 22479419 | 2.90E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TCF4 |
| 18 | 53068680 | rs17510124 | T | C | rs17510124 | 22479419 | 3.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | TCF4 |
| 18 | 53074618 | rs7228846 | A | G | rs7228846 | 22479419 | 2.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TCF4 |
| 18 | 53075292 | rs8089309 | A | C | rs8089309 | 22479419 | 3.80E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TCF4 |
| 18 | 53082236 | rs1371832 | C | T | rs1371832 | 22479419 | 4.00E-07 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | TCF4 |
| 18 | 53155002 | rs9960767 | A | C | rs9960767 | 19571808 | 4.00E-09 | NA | 1.23 | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs9960767-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 53155002 | rs9960767 | A | C | rs9960767 | 21791550 | 4.20E-09 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 18 | 53155002 | rs9960767 | A | C | rs9960767 | 22479419 | 4.10E-09 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | TCF4 |
| 18 | 53155002 | rs9960767 | A | C | rs9960767 | 23164818 | 0.00057 | NA | NA | NA | 7,946 cases; 19,036 controls | NOPOP(26982) | ALL(26982) | NOPOP(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Multicenter Study | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't |
| 18 | 53194961 | rs17512836 | T | C | rs17512836 | 21926974 | 1.00E-06 | NA | 1.23 | [1.14-1.31] | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs17512836-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 53480206 | rs1531519 | T | C | rs1531519 | 19197363 | 5.64E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 53636776 | rs17603324 | G | A | rs17603324 | 22440650 | 0.000776 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | NA |
| 18 | 56859448 | rs8098067 | A | G | rs8098067 | 19197363 | 5.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 57088063 | rs12965304 | C | T | rs12965304 | 21926974 | 8.70E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 57419473 | rs1788897 | T | C | rs1788897 | 19197363 | 4.46E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 59005831 | rs6567206 | G | T | rs6567206 | 21926974 | 9.04E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 62609303 | rs17074003 | T | C | rs17074003 | 19571809 | 4.55E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 62609303 | rs17074003 | T | C | rs17074003 | pha002859 | 4.56E-05 | phs000021 | 1.29 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA | NA | NA |
| 18 | 64122863 | rs9319710 | A | G | rs9319710 | 19197363 | 6.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 65193272 | rs1904846 | A | G | rs1904846 | 19197363 | 8.53E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 65457839 | rs17077971 | G | T | rs17077971 | 21926974 | 7.68E-08 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 65887287 | rs6566351 | T | C | rs6566351 | 19197363 | 9.30E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 66314072 | rs1704734 | A | T | rs1704734 | 20889312 | 6.00E-06 | NA | 1.32 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 66878714 | rs672613 | G | A | rs672613 | 20889312 | 1.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 68459549 | rs1529210 | C | T | rs1529210 | 19197363 | 1.19E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 70546470 | rs2156107 | C | T | rs2156107 | 20832056 | 1.37E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | LOC100505797 |
| 18 | 70546687 | rs2187116 | G | A | rs2187116 | 20832056 | 1.97E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | LOC100505797 |
| 18 | 70567250 | rs8086712 | A | G | rs8086712 | 20832056 | 1.96E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 18 | 70683199 | rs2432835 | T | C | rs2432835 | 22883433 | 1.53E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 72786303 | rs4891224 | G | A | rs4891224 | 19197363 | 7.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 18 | 72802103 | rs906517 | T | C | rs906517 | 19197363 | 1.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 72802103 | rs906517 | T | C | rs906517 | 19571808 | 5.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 73318771 | rs11665640 | C | T | rs11665640 | 19197363 | 8.71E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 18 | 74269894 | rs7232061 | G | A | rs7232061 | 19197363 | 1.36E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 18 | 75912922 | rs4798896 | A | G | rs4798896 | 23212062 | 4.00E-06 | Mood symptoms | 0.09 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 18 | 76157317 | rs9947138 | G | A | rs9947138 | 19571809 | 3.00E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 76157746 | rs626675 | G | A | rs626675 | 19571809 | 5.44E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 18 | 77299280 | rs4799062 | G | A | rs4799062 | 19571808 | 6.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
| 18 | 77340427 | rs614569 | T | C | rs614569 | 19197363 | 1.41E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 18 | 77392379 | rs7233060 | G | A | rs7233060 | 23212062 | 3.00E-07 | Positive symptoms | 0.12 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 18 | 77592660 | rs537962 | C | G | rs537962 | 20889312 | 1.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 18 | 77608203 | rs4799092 | C | G | rs4799092 | 20889312 | 2.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 376008 | rs1549697 | C | T | rs1549697 | 19850283 | 1.20E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | T |
| 19 | 2138507 | rs12460763 | A | G | rs12460763 | 19850283 | 3.93E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | G |
| 19 | 3245938 | rs4807431 | A | G | rs4807431 | 20889312 | 1.20E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 3251219 | rs17764205 | T | G | rs17764205 | 20889312 | 5.00E-06 | NA | 1.36 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 3253532 | rs10424519 | G | C | rs10424519 | 20889312 | 1.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 3253928 | rs8112130 | C | T | rs8112130 | 20889312 | 5.42E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 3257415 | rs11669985 | C | G | rs11669985 | 20889312 | 1.79E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 5382472 | rs12985637 | T | C | rs12985637 | 23358160 | 1.70E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 5469640 | rs11671309 | G | A | rs11671309 | 20889312 | 3.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 6033976 | rs673153 | T | C | rs673153 | 19197363 | 7.88E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 6075713 | rs10401349 | G | A | rs10401349 | 20889312 | 3.55E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 6080482 | rs11880706 | C | G | rs11880706 | 20889312 | 2.00E-06 | NA | 1.44 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 6102181 | rs10411815 | T | C | rs10411815 | 20889312 | 5.50E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 6102780 | rs10405147 | G | T | rs10405147 | 20889312 | 4.57E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 7235389 | rs4804103 | C | T | rs4804103 | 19197363 | 6.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 10106671 | rs3745592 | C | G | rs3745592 | 24043878 | 5.52E-05 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs3745592-C | Research Support, Non-U.S. Gov't | C | COL5A3 |
| 19 | 11330942 | rs17699030 | A | G | rs17699030 | 20889312 | 8.00E-06 | NA | 1.71 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 15863023 | rs7257304 | T | C | rs7257304 | 22037555 | 6.18E-07 | NA | NA | NA | 3,750 Chinese ancestry cases; 6,468 Chinese ancestry controls | Chinese(10218) | ALL(10218) | ASN(10218) | ALL(10218) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C,T | NA |
| 19 | 16694094 | rs2216670 | T | G | rs2216670 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 16735788 | rs3786603 | C | T | rs3786603 | 19197363 | 7.05E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 17354825 | rs4808611 | C | T | rs4808611 | 23805179 | 4.71E-06 | NA | 391.2 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs4808611-T | JOURNAL ARTICLE |
| 19 | 17359535 | rs35686037 | C | T | rs35686037 | 23805179 | 8.31E-07 | NA | 431.8 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs35686037-T | JOURNAL ARTICLE |
| 19 | 17371568 | rs12982178 | T | C | rs12982178 | 23805179 | 1.08E-06 | NA | 416.3 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs12982178-C | JOURNAL ARTICLE |
| 19 | 17379558 | rs10424178 | C | T | rs10424178 | 23805179 | 1.76E-06 | NA | 390.8 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs10424178-T | JOURNAL ARTICLE |
| 19 | 17389648 | rs10406920 | C | T | rs10406920 | 23805179 | 6.75E-06 | NA | 376.1 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs10406920-T | JOURNAL ARTICLE |
| 19 | 17389704 | rs8170 | G | A | rs8170 | 23805179 | 6.75E-06 | NA | 376.1 | [NA] unit increase | 170 European ancestry individuals; 158 individuals | NOPOP(158) | European(170) | ALL(328) | NOPOP(158) | EUR(170) | ALL(328) | Hippocampal volume in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | rs8170-A | JOURNAL ARTICLE |
| 19 | 17734848 | rs10419511 | C | T | rs10419511 | 20889312 | 8.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 18440942 | rs4641872 | G | T | rs4641872 | 20889312 | 3.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 18467886 | rs7248363 | T | C | rs7248363 | 20889312 | 1.00E-06 | NA | 1.3 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 18467886 | rs7248363 | T | C | rs7248363 | pha002857 | 3.85E-05 | phs000021 | 1.32 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | PGPEP1 | intron | NM_017712 |
| 19 | 19473445 | rs2905424 | T | C | rs2905424 | 23974872 | 3.00E-09 | NA | 1.09 | [1.06-1.12] | 5,001 European ancestry cases; 6,243 European ancestry controls; 8,832 cases; 12,067 controls | NOPOP(20899) | European(11244) | ALL(32143) | NOPOP(20899) | EUR(11244) | ALL(32143) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2905424-T | Research Support, N.I.H., Extramural |
| 19 | 22789430 | rs11673496 | G | A | rs11673496 | 22479419 | 2.25E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 19 | 28586861 | rs10420392 | C | T | rs10420392 | 19197363 | 6.56E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 19 | 29730876 | rs17691420 | G | C | rs17691420 | 19571809 | 4.77E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 19 | 29730876 | rs17691420 | G | C | rs17691420 | pha002859 | 3.10E-05 | phs000021 | 1.33 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| 19 | 31810800 | rs12460841 | G | A | rs12460841 | 22440650 | 0.000325 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | G | TSHZ3 |
| 19 | 32226182 | rs277432 | C | T | rs277432 | 19197363 | 8.43E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 19 | 32631274 | rs8112050 | C | T | rs8112050 | 21926974 | 3.19E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 19 | 33990439 | rs33824 | C | T | rs33824 | 23358160 | 9.78E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 19 | 34000725 | rs33823 | T | C | rs33823 | 23358160 | 8.11E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 19 | 34168273 | rs4805924 | C | T | rs4805924 | 21107309 | 6.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (working memory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | CHST8 |
| 19 | 34189637 | rs2041728 | G | A | rs2041728 | 19571811 | 4.35E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | CHST8 |
| 19 | 34556604 | rs4805975 | G | A | rs4805975 | 19850283 | 2.81E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 19 | 35321775 | rs755733 | G | T | rs755733 | 19197363 | 7.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 19 | 35724000 | rs11669258 | A | C | rs11669258 | 20832056 | 3.53E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | NA |
| 19 | 35724024 | rs10422195 | G | A | rs10422195 | 20832056 | 2.96E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 19 | 40229409 | rs12611334 | C | G | rs12611334 | 23894747 | 2.00E-06 | EA | 1.4 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs12611334-G | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 19 | 42066279 | rs4803480 | A | G | rs4803480 | 21682944 | 1.00E-07 | NA | NA | NA | 331 Jewish-Israeli family members | Jewish-Israeli(331) | ALL(331) | MEA(331) | ALL(331) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs4803480-A | Research Support, Non-U.S. Gov't | G | NA |
| 19 | 43912962 | rs4340422 | A | G | rs4340422 | 19850283 | 5.00E-05 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | A |
| 19 | 47879874 | rs10419083 | C | T | rs10419083 | 21688384 | 6.34E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | DHX34 |
| 19 | 47881778 | rs10403927 | T | G | rs10403927 | 21688384 | 9.24E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | DHX34 |
| 19 | 48601512 | rs11564538 | G | A | rs11564538 | 20889312 | 4.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 50148052 | rs12104272 | G | A | rs12104272 | 19571809 | 6.97E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 19 | 51726613 | rs3826656 | G | A | rs3826656 | 19571809 | 3.80E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 19 | 52131119 | rs2278831 | A | G | rs2278831 | 19197363 | 8.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 19 | 52726346 | rs10417820 | A | G | rs10417820 | 20832056 | 4.20E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PPP2R1A |
| 19 | 55213281 | rs11084367 | G | A | rs11084367 | 20889312 | 8.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 19 | 57234652 | rs1029837 | T | C | rs1029837 | 21688384 | 2.83E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 20 | 894722 | rs910389 | G | A | rs910389 | 19571809 | 5.63E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 2735182 | rs1005304 | G | A | rs1005304 | 19197363 | 6.86E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 4751336 | rs16990147 | G | T | rs16990147 | 22648509 | 8.17E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 20 | 10030931 | rs656111 | C | A | rs656111 | 22037552 | 6.68E-06 | NA | NA | NA | 746 Chinese ancestry cases; 1,599 Chinese ancestry controls | Chinese(2345) | ALL(2345) | ASN(2345) | ALL(2345) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | ANKRD5 |
| 20 | 10769877 | rs4813944 | T | C | rs4813944 | 20185149 | 2.03E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C |
| 20 | 11508980 | rs4814019 | A | C | rs4814019 | 19197363 | 1.41E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 12299029 | rs6078518 | C | T | rs6078518 | 19197363 | 8.93E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 13095232 | rs1014380 | T | C | rs1014380 | 21674006 | 2.36E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | SPTLC3 |
| 20 | 14230505 | rs3747927 | G | A | rs3747927 | 22440650 | 0.0000535 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | MACROD2 |
| 20 | 15872970 | rs6043600 | G | A | rs6043600 | 19571809 | 2.94E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 15872970 | rs6043600 | G | A | rs6043600 | pha002859 | 6.18E-05 | phs000021 | 1.49 | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | MACROD2 | intron | NM_001033087 |
| 20 | 16753985 | rs6080411 | A | G | rs6080411 | 20185149 | 5.21E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A |
| 20 | 16761605 | rs4813250 | G | T | rs4813250 | 20185149 | 9.53E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 20 | 19439993 | rs6106080 | G | A | rs6106080 | 20889312 | 2.41E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 19851455 | rs4813376 | T | G | rs4813376 | 20889312 | 6.11E-07 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 19851466 | rs4813377 | A | G | rs4813377 | 20889312 | 5.72E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 19852503 | rs6046396 | G | A | rs6046396 | 20889312 | 4.00E-07 | NA | 1.28 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 19868883 | rs6136874 | C | T | rs6136874 | 20889312 | 9.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 19985970 | rs6112714 | G | A | rs6112714 | 19571809 | 9.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 20246569 | rs7269093 | T | C | rs7269093 | 19571811 | 6.68E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | C20orf26 |
| 20 | 21011163 | rs1474949 | A | G | rs1474949 | 20185149 | 8.56E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G |
| 20 | 21019305 | rs6082289 | T | C | rs6082289 | 20185149 | 1.89E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T,C |
| 20 | 23873518 | rs6138159 | A | G | rs6138159 | 19197363 | 4.24E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 20 | 24471903 | rs6049735 | A | G | rs6049735 | 24253340 | 8.58E-05 | NA | 1.28 | [1.14-1.45] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 20 | 24716288 | rs2424631 | A | C | rs2424631 | 20889312 | 8.30E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 24717085 | rs2424635 | C | A | rs2424635 | 20889312 | 7.00E-06 | NA | 1.23 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 31427635 | rs2070090 | C | T | rs2070090 | 19850283 | 2.64E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 20 | 36737771 | rs6023059 | T | C | rs6023059 | 20889312 | 7.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 36957837 | rs6024905 | G | A | rs6024905 | 20889312 | 1.00E-06 | NA | 1.24 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 38454167 | rs211863 | G | A | rs211863 | 19571811 | 3.28E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| 20 | 38481575 | rs8116303 | G | A | rs8116303 | 20832056 | 2.62E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 20 | 39092895 | rs2143877 | A | G | rs2143877 | 19571809 | 5.75E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 39497686 | rs6129694 | G | T | rs6129694 | 19571809 | 7.46E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 40492858 | rs6029852 | A | G | rs6029852 | 19571809 | 7.08E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 20 | 42473223 | rs6017203 | T | C | rs6017203 | 21926974 | 7.16E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 43598705 | rs927000 | C | T | rs927000 | 20889312 | 1.46E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 44575493 | rs16990949 | C | T | rs16990949 | 20889312 | 4.25E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 44739156 | rs1535044 | G | A | rs1535044 | 22440650 | 0.000551 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 20 | 45367764 | rs11699667 | G | C | rs11699667 | 20832056 | 4.70E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 20 | 45532122 | rs6124883 | T | C | rs6124883 | 19197363 | 8.17E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 50165634 | rs6013210 | C | G | rs6013210 | 21926974 | 6.71E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 52356646 | rs6063986 | C | T | rs6063986 | 19197363 | 4.25E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 52610496 | rs2276498 | C | G | rs2276498 | 20889312 | 7.00E-06 | NA | 1.31 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 52628804 | rs6127058 | T | C | rs6127058 | 20889312 | 2.12E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 52658593 | rs11905945 | T | C | rs11905945 | 20889312 | 3.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 52671273 | rs6127073 | G | A | rs6127073 | 20889312 | 4.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 52673217 | rs2870304 | A | G | rs2870304 | 20889312 | 1.60E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 54831337 | rs1926065 | G | A | rs1926065 | 21926974 | 7.61E-05 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 20 | 54832230 | rs6127702 | G | A | rs6127702 | 19571811 | 5.91E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| 20 | 55627407 | rs6127916 | T | C | rs6127916 | 19197363 | 2.92E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 20 | 55683996 | rs11699237 | T | C | rs11699237 | 23212062 | 3.00E-06 | Negative/disorganized symptoms | 0.12 | [NA] unit increase | 2,454 European ancestry cases | European(2454) | ALL(2454) | EUR(2454) | ALL(2454) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | Research Support, U.S. Gov't, Non-P.H.S. |
| 20 | 56012085 | rs2426728 | G | A | rs2426728 | 21688384 | 7.03E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 20 | 56012674 | rs2426729 | C | T | rs2426729 | 21688384 | 4.12E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| 20 | 56664812 | rs11698339 | A | G | rs11698339 | 19197363 | 1.55E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 20 | 56719673 | rs6128273 | C | A | rs6128273 | 19197363 | 2.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 57153844 | rs6070519 | C | G | rs6070519 | 20889312 | 7.65E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 57610059 | rs151358 | C | A | rs151358 | 22883433 | 4.30E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 57614002 | rs151361 | A | G | rs151361 | 22883433 | 9.01E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 20 | 57789801 | rs7264385 | A | G | rs7264385 | 19197363 | 1.39E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 20 | 57917689 | rs6128541 | T | C | rs6128541 | 19197363 | 9.29E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 20 | 57919516 | rs1964825 | G | A | rs1964825 | 19197363 | 2.77E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 20 | 59398393 | rs17201745 | T | C | rs17201745 | 20185149 | 3.65E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 20 | 59422846 | rs4812218 | T | C | rs4812218 | 20185149 | 3.80E-06 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 20 | 59435606 | rs17201877 | T | C | rs17201877 | 20185149 | 3.29E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | NA |
| 20 | 59436966 | rs17794052 | T | G | rs17794052 | 20185149 | 3.65E-05 | NA | NA | NA | 201 Caucasian cases; 305 European controls | Caucasian(201) | European(305) | ALL(506) | EUR(506) | ALL(506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T |
| 20 | 59975048 | rs6061722 | T | C | rs6061722 | 20889312 | 2.80E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 60204905 | rs6121731 | T | C | rs6121731 | 20889312 | 4.18E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 60214214 | rs2427216 | C | A | rs2427216 | 20889312 | 6.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 20 | 61532837 | rs6011460 | G | C | rs6011460 | 20832056 | 4.47E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | DIDO1 |
| 20 | 61556771 | rs6011478 | A | G | rs6011478 | 20832056 | 3.83E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | DIDO1 |
| 21 | 11002011 | rs240444 | T | C | rs240444 | 19571809 | 9.19E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 21 | 11002011 | rs240444 | T | C | rs240444 | 20889312 | 2.00E-06 | NA | 1.31 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 18122773 | rs2824026 | G | A | rs2824026 | 20889312 | 4.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 20548365 | rs2825400 | A | C | rs2825400 | 20889312 | 8.04E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 20598416 | rs6517861 | G | A | rs6517861 | 21926974 | 3.23E-07 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 21035092 | rs1989458 | A | G | rs1989458 | 21674006 | 1.15E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 21 | 21277651 | rs1475873 | A | G | rs1475873 | 19197363 | 7.11E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 22186388 | rs2826530 | T | A | rs2826530 | 21688384 | 9.64E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| 21 | 22622666 | rs2826753 | G | A | rs2826753 | 21674006 | 5.79E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NCAM2 |
| 21 | 25955673 | rs2226818 | A | G | rs2226818 | 19197363 | 3.03E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 26085506 | rs2829287 | C | T | rs2829287 | 20889312 | 7.01E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 26263549 | rs2829449 | T | C | rs2829449 | 19197363 | 8.73E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 21 | 27508721 | rs16997475 | G | A | rs16997475 | 21926974 | 9.56E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 28472489 | rs10482982 | A | G | rs10482982 | 19197363 | 5.44E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 30136915 | rs2832068 | T | C | rs2832068 | 19850283 | 2.73E-04 | Risperidone response in schizophrenia treatment | NA | NA | 99 Japanese samples | Japanese(99) | ALL(99) | ASN(99) | ALL(99) | Schizophrenia(treatment response to risperidone) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Clinical Trial | Research Support, Non-U.S. Gov't | C |
| 21 | 30347990 | rs2255564 | T | C | rs2255564 | 24253340 | 9.17E-05 | NA | 1.43 | [1.20-1.72] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 21 | 30357163 | rs2245431 | G | T | rs2245431 | 24253340 | 7.91E-05 | NA | 1.45 | [1.20-1.72] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 31140753 | rs459617 | C | T | rs459617 | 23358160 | 3.49E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 21 | 33285300 | rs2833556 | G | A | rs2833556 | 21107309 | 5.00E-07 | NA | NA | NA | 738 European ancestry, African American; and other ancestry cases | European,African American(738) | ALL(738) | EUR,AFR(738) | ALL(738) | Response to antipsychotic treatment in schizophrenia (reasoning) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | HUNK |
| 21 | 33333331 | rs8130926 | T | C | rs8130926 | 21688384 | 3.00E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | HUNK |
| 21 | 33340086 | rs2833586 | C | T | rs2833586 | 21688384 | 1.63E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | HUNK |
| 21 | 33826744 | rs10854359 | C | T | rs10854359 | 22883433 | 5.14E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 21 | 33832194 | rs1041823 | T | C | rs1041823 | 22883433 | 5.10E-05 | NA | NA | NA | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 21 | 33933263 | rs2833899 | T | C | rs2833899 | 21926974 | 4.08E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 21 | 37381952 | rs2212918 | C | T | rs2212918 | 20832056 | 4.56E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | NA |
| 21 | 37427907 | rs2835261 | G | A | rs2835261 | 20832056 | 1.03E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | SETD4 |
| 21 | 39930706 | rs1999328 | C | A | rs1999328 | 23358160 | 5.52E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 39938412 | rs2836518 | C | A | rs2836518 | 23358160 | 1.32E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 41023491 | rs596958 | A | G | rs596958 | 19197363 | 1.00E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 21 | 41027747 | rs2239385 | G | A | rs2239385 | 19197363 | 3.96E-05 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 41962212 | rs2837727 | T | G | rs2837727 | 20889312 | 7.43E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 41965186 | rs2837734 | G | A | rs2837734 | 20889312 | 7.09E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 42168699 | rs2837826 | G | A | rs2837826 | 19197363 | 4.64E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 42676917 | rs928300 | A | T | rs928300 | 20889312 | 9.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 43176799 | rs13049286 | T | G | rs13049286 | 22479419 | 3.40E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | RIPK4 |
| 21 | 43180486 | rs3827219 | C | T | rs3827219 | 22479419 | 2.66E-05 | NA | NA | NA | 522 Han Chinese cases; 806 Han Chinese controls | Han Chinese(1328) | ALL(1328) | ASN(1328) | ALL(1328) | Schizophrenia (treatment refractory) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | RIPK4 |
| 21 | 43771711 | rs3814896 | A | G | rs3814896 | 19197363 | 5.38E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 43775884 | rs225344 | G | A | rs225344 | 20038948 | 3.00E-05 | Human short-term memory | NA | NA | 333 Swiss young individuals | Swiss(333) | ALL(333) | EUR(333) | ALL(333) | Memory (short-term) | HPOID:0002354 | Memory impairment | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| 21 | 43805637 | rs2839501 | C | T | rs2839501 | 24253340 | 1.86E-05 | NA | 1.3 | [1.16-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,A |
| 21 | 43806193 | rs10887973 | T | G | rs10887973 | 24253340 | 2.33E-05 | NA | 1.3 | [1.15-1.47] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 21 | 44618563 | rs2212838 | A | C | rs2212838 | 24253340 | 5.48E-06 | NA | 1.58 | [1.30-1.92] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 21 | 45661343 | rs378299 | C | T | rs378299 | 19197363 | 6.32E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 21 | 45711202 | rs1078480 | A | G | rs1078480 | 19197363 | 5.67E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 21 | 46012524 | rs418260 | T | C | rs418260 | 23358160 | 5.86E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 21 | 47041808 | rs11701130 | G | T | rs11701130 | 20889312 | 9.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 47124178 | rs4819143 | G | A | rs4819143 | 20889312 | 9.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 21 | 47782064 | rs4819241 | C | T | rs4819241 | 20832056 | 1.62E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PCNT |
| 21 | 47786524 | rs2839227 | A | G | rs2839227 | 20832056 | 2.60E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PCNT |
| 21 | 47792874 | rs2839232 | G | A | rs2839232 | 20832056 | 2.41E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | PCNT |
| 21 | 47796874 | rs2839234 | G | A | rs2839234 | 20832056 | 1.46E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PCNT |
| 21 | 47821588 | rs6518291 | A | G | rs6518291 | 20832056 | 3.24E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | PCNT |
| 21 | 47841692 | rs2839251 | C | T | rs2839251 | 20832056 | 9.41E-05 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | PCNT |
| 21 | 47881309 | rs2078203 | A | G | rs2078203 | 20832056 | 3.41E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | T | DIP2A |
| 21 | 47886796 | rs8132320 | A | G | rs8132320 | 20832056 | 2.51E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | DIP2A |
| 21 | 47895181 | rs2839274 | A | G | rs2839274 | 20832056 | 2.48E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | DIP2A |
| 22 | 17809117 | rs5994267 | A | T | rs5994267 | 20889312 | 8.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 18916180 | rs759404 | C | T | rs759404 | 19197363 | 7.29E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 18937513 | rs5992340 | T | A | rs5992340 | 21688384 | 4.02E-05 | Schizophrenia age at onset (females) | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | A | NA |
| 22 | 19026025 | rs10160 | A | G | rs10160 | 24253340 | 9.90E-05 | NA | 1.25 | [1.11-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 19094165 | rs2189490 | C | T | rs2189490 | 24253340 | 6.98E-05 | NA | 1.25 | [1.12-1.41] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 22 | 19718144 | rs5748410 | G | A | rs5748410 | 20832056 | 4.56E-04 | NA | NA | NA | 560 Japanese cases; 548 Japanese controls | Japanese(1108) | ALL(1108) | ASN(1108) | ALL(1108) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| 22 | 19910716 | rs7289747 | A | C | rs7289747 | 21791550 | 9.60E-06 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 22 | 19910716 | rs7289747 | A | C | rs7289747 | 21926974 | 9.67E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 21249705 | rs5761195 | G | C | rs5761195 | 24043878 | 2.16E-04 | NA | NA | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs5761195-C | Research Support, Non-U.S. Gov't | G | NA |
| 22 | 21371227 | rs9625334 | C | A | rs9625334 | 19571809 | 4.59E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 22296119 | rs240065 | C | T | rs240065 | 19197363 | 8.27E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 23731801 | rs7349056 | A | G | rs7349056 | 19197363 | 5.75E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 23860188 | rs131356 | T | C | rs131356 | 20889312 | 6.93E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 23860506 | rs131357 | C | T | rs131357 | 20889312 | 5.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 25572922 | rs5760892 | A | T | rs5760892 | 20889312 | 5.10E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 25586662 | rs17607104 | G | A | rs17607104 | 20889312 | 4.81E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 26139378 | rs5761163 | A | G | rs5761163 | 19571811 | 3.44E-07 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | MYO18B |
| 22 | 26735632 | rs17305959 | C | T | rs17305959 | 20889312 | 9.98E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 26735813 | rs17306064 | T | C | rs17306064 | 20889312 | 3.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 27002223 | rs9613228 | G | A | rs9613228 | 19571809 | 4.58E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 27011420 | rs4822752 | C | T | rs4822752 | 19571809 | 9.82E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 27011420 | rs4822752 | C | T | rs4822752 | 20889312 | 9.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 27792500 | rs5752534 | C | A | rs5752534 | 21791550 | 5.60E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 22 | 27881885 | rs1474813 | C | T | rs1474813 | 19197363 | 2.54E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 29485794 | rs713861 | G | A | rs713861 | 19571809 | 6.67E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 29839168 | rs5763241 | T | C | rs5763241 | 22648509 | 9.65E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | T |
| 22 | 31520338 | rs3747152 | G | A | rs3747152 | 22648509 | 7.53E-05 | NA | NA | NA | 835 European ancestry cases; 2,694 European ancestry controls | European(3529) | ALL(3529) | EUR(3529) | ALL(3529) | Formal thought disorder in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D019967 | Schizophrenia and Disorders with Psychotic Features | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | G |
| 22 | 32046022 | rs5998069 | G | A | rs5998069 | 19571809 | 2.04E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 32722656 | rs2072811 | C | T | rs2072811 | 19197363 | 8.60E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 34271782 | rs9621795 | A | G | rs9621795 | 19571809 | 3.65E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| 22 | 34271782 | rs9621795 | A | G | rs9621795 | 21926974 | 6.59E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 34271782 | rs9621795 | A | G | rs9621795 | 23637625 | 0.0000166 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 36730947 | rs2413398 | T | G | rs2413398 | 19571811 | 9.49E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | MYH9 |
| 22 | 36891858 | rs5756219 | C | A | rs5756219 | 19197363 | 1.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 36912724 | rs2076083 | C | T | rs2076083 | 21674006 | 1.90E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | EIF3D |
| 22 | 37171611 | rs2009667 | A | G | rs2009667 | 19197363 | 5.91E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 37330082 | rs2075937 | T | C | rs2075937 | 19197363 | 3.34E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 22 | 37671677 | rs739036 | C | T | rs739036 | 19197363 | 2.02E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 38662396 | rs12485196 | T | C | rs12485196 | 19197363 | 3.37E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
| 22 | 39874314 | rs2899319 | A | C | rs2899319 | 19197363 | 6.49E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 39955873 | rs9611198 | A | C | rs9611198 | 22883433 | 8.00E-06 | NA | 1.22 | [1.11-1.34] | 1,606 European ancestry cases; 1,794 European ancestry controls | European(3400) | ALL(3400) | EUR(3400) | ALL(3400) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs9611198-C | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 40357667 | rs9611234 | G | A | rs9611234 | 20889312 | 2.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 40729614 | rs470113 | A | G | rs470113 | 19571808 | 5.40E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 40736472 | rs12484697 | G | A | rs12484697 | 19571808 | 4.30E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 40781162 | rs9611324 | T | C | rs9611324 | 19571808 | 3.90E-05 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 40825193 | rs6001911 | A | G | rs6001911 | 20889312 | 3.99E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 40989374 | rs17002030 | T | C | rs17002030 | 20889312 | 1.68E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 40996367 | rs17002034 | G | T | rs17002034 | 20889312 | 4.00E-06 | NA | 1.4 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 40997111 | rs17002036 | G | A | rs17002036 | 20889312 | 4.78E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 41461865 | rs5758209 | T | G | rs5758209 | 21926974 | 8.39E-06 | NA | NA | NA | 9,394 European ancestry cases; 12,462 European ancestry controls | European(21856) | ALL(21856) | EUR(21856) | ALL(21856) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 41461865 | rs5758209 | T | G | rs5758209 | 23637625 | 0.00000506 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 42385967 | rs6519301 | A | G | rs6519301 | 20889312 | 2.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42399686 | rs129857 | T | C | rs129857 | 20889312 | 2.53E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42416056 | rs133335 | A | G | rs133335 | 20889312 | 2.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42417687 | rs133340 | T | A | rs133340 | 20889312 | 3.85E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42454950 | rs1063392 | A | G | rs1063392 | 20889312 | 9.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42463366 | rs133367 | C | T | rs133367 | 20889312 | 3.38E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42508937 | rs5751216 | G | T | rs5751216 | 20889312 | 1.90E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42622003 | rs5758659 | C | T | rs5758659 | 20889312 | 2.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42623718 | rs5758660 | C | A | rs5758660 | 20889312 | 1.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42670965 | rs134882 | T | C | rs134882 | 20889312 | 7.00E-06 | NA | 1.22 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42683343 | rs134900 | G | C | rs134900 | 20889312 | 1.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 42683997 | rs134902 | G | A | rs134902 | 20889312 | 1.13E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| 22 | 44582264 | rs6519830 | G | A | rs6519830 | 19197363 | 7.99E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 44934672 | rs876231 | A | G | rs876231 | 22440650 | 0.000316 | NA | NA | NA | 92 cases; 116 controls | NOPOP(208) | ALL(208) | NOPOP(208) | ALL(208) | fMRI brain tests in schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C,T | NA |
| 22 | 47543791 | rs13057083 | A | G | rs13057083 | 23358160 | 3.05E-05 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 48085915 | rs6359 | T | C | rs6359 | 19197363 | 7.28E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 48107054 | rs400116 | G | A | rs400116 | 19197363 | 1.48E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| 22 | 48365123 | rs13055322 | C | T | rs13055322 | 23358160 | 8.87E-04 | NA | NA | NA | 888 European ancestry cases; 882 European ancestry controls | European(1770) | ALL(1770) | EUR(1770) | ALL(1770) | Schizophrenia (cytomegalovirus infection interaction) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| 22 | 48546285 | rs131137 | A | C | rs131137 | 21791550 | 9.30E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| 22 | 50218611 | rs138880 | A | C | rs138880 | 23894747 | 2.00E-07 | NA | 1.1 | NA | 11,185 European ancestry cases; 10,768 European ancestry controls | European(21953) | ALL(21953) | EUR(21953) | ALL(21953) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs138880-C | Research Support, N.I.H., Extramural | Meta-Analysis | C |
| 22 | 50294988 | rs6520066 | C | T | rs6520066 | 19571811 | 9.36E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA |
| 22 | 50557407 | rs138229 | A | G | rs138229 | 19197363 | 3.64E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| 22 | 51219006 | rs28729663 | G | A | rs28729663 | 23637625 | 0.000182 | NA | NA | NA | 9379 cases; 7736 controls (SCZ); 6990 cases; 4820 controls (BD) | NOPOP(28925) | ALL(28925) | NOPOP(28925) | ALL(28925) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
| X | 3224257 | rs1622778 | A | G | rs1622778 | 19571809 | 1.36E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 3228891 | rs1635235 | A | G | rs1635235 | 19571809 | 1.25E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 3231850 | rs1635238 | G | A | rs1635238 | 19571809 | 6.27E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 3232699 | rs1635239 | C | A | rs1635239 | 19571809 | 3.04E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 3233112 | rs1726206 | C | A | rs1726206 | 19571809 | 5.28E-06 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 3241050 | rs1635247 | G | A | rs1635247 | 19571809 | 8.14E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 4779779 | rs6530524 | C | T | rs6530524 | 21688384 | 9.16E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | C | NA |
| X | 4786239 | rs4393058 | T | G | rs4393058 | 21688384 | 2.19E-05 | Schizophrenia age at onset | NA | NA | 1162 European ancestry cases with AAO values; 1378 European ancestry controls | European(2540) | ALL(2540) | EUR(2540) | ALL(2540) | Schizophrenia(age at onset) | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | NA | NA | NA | NA | Schizophrenia | NA | Research Support, N.I.H., Extramural | T | NA |
| X | 5949912 | rs6639583 | T | C | rs6639583 | 21791550 | 8.60E-05 | Schizophrenia | NA | NA | 7946 European cases; 19036 European controls | European(26982) | ALL(26982) | EUR(26982) | ALL(26982) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Meta-Analysis | Research Support, Non-U.S. Gov't |
| X | 5972382 | rs1882411 | C | T | rs1882411 | 19571808 | 5.20E-06 | NA | NA | NA | 2,663 European ancestry cases; 13,498 European ancestry controls | European(16161) | ALL(16161) | EUR(16161) | ALL(16161) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| X | 6840872 | rs5978906 | G | A | rs5978906 | 20889312 | 8.21E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 8962383 | rs5978998 | C | T | rs5978998 | 20889312 | 8.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10006452 | rs5978365 | T | C | rs5978365 | 20889312 | 2.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10023651 | rs16985871 | C | G | rs16985871 | 20889312 | 1.08E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10024068 | rs11797705 | A | G | rs11797705 | 20889312 | 5.94E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10033083 | rs11796740 | G | A | rs11796740 | 20889312 | 9.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10036515 | rs11796119 | C | G | rs11796119 | 20889312 | 2.87E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10036687 | rs12850255 | T | A | rs12850255 | 20889312 | 1.35E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10037284 | rs7059930 | A | G | rs7059930 | 20889312 | 1.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 10039178 | rs765810 | T | C | rs765810 | 20889312 | 4.47E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 12299461 | rs5978509 | G | A | rs5978509 | 20889312 | 4.24E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 12679458 | rs5935377 | T | C | rs5935377 | 19197363 | 6.74E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| X | 19700342 | rs4131939 | C | T | rs4131939 | 20889312 | 7.67E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 19723880 | rs5955573 | G | C | rs5955573 | 20889312 | 5.58E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 21054048 | rs5991001 | C | T | rs5991001 | 20889312 | 2.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 22624292 | rs4636385 | G | A | rs4636385 | 20889312 | 6.32E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 28749116 | rs10521945 | C | T | rs10521945 | 21674006 | 7.89E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | IL1RAPL1 |
| X | 32225255 | rs1456737 | A | C | rs1456737 | 20889312 | 5.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 32304724 | rs5971615 | C | G | rs5971615 | 20889312 | 5.52E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 32464706 | rs6631584 | A | G | rs6631584 | 24253340 | 5.59E-05 | NA | 1.36 | [1.21-1.53] | 904 Ashkenazi Jewish cases; 1,640 Ashkenazi Jewish controls | Ashkenazi Jewish(2544) | ALL(2544) | MEA(2544) | ALL(2544) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
| X | 32606331 | rs808556 | G | T | rs808556 | 21674006 | 1.45E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C | DMD |
| X | 41202159 | rs10521420 | G | A | rs10521420 | 21674006 | 6.07E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | DDX3X |
| X | 41980258 | rs206044 | A | G | rs206044 | 20889312 | 3.45E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 41985852 | rs12558641 | C | T | rs12558641 | pha002857 | 5.22E-05 | phs000021 | NA | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | T | NA | NA | NA |
| X | 53344023 | rs880441 | C | A | rs880441 | 19197363 | 8.08E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| X | 53974054 | rs7065696 | C | G | rs7065696 | 21057379 | 4.00E-07 | NA | NA | NA | 506 European bipolar 1 disorder cases; 523 European schizophrenia cases; 505 European controls | European(1534) | ALL(1534) | EUR(1534) | ALL(1534) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82477393 | rs12007416 | T | G | rs12007416 | 20889312 | 3.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82498950 | rs290379 | C | T | rs290379 | 20889312 | 5.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82503057 | rs2046277 | C | T | rs2046277 | 20889312 | 6.00E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82507485 | rs771837 | T | G | rs771837 | 20889312 | 4.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82519977 | rs12688929 | A | G | rs12688929 | 20889312 | 4.28E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82527017 | rs7063188 | T | C | rs7063188 | 20889312 | 3.91E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82529564 | rs7064448 | C | T | rs7064448 | 20889312 | 9.89E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82535169 | rs1410530 | G | A | rs1410530 | 20889312 | 4.00E-06 | NA | 1.37 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82591470 | rs1299087 | A | G | rs1299087 | 20889312 | 2.71E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82596109 | rs815869 | A | G | rs815869 | 20889312 | 4.84E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82612033 | rs709201 | G | A | rs709201 | 20889312 | 3.63E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82623043 | rs1068907 | G | A | rs1068907 | 20889312 | 1.05E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82699898 | rs212911 | C | A | rs212911 | 20889312 | 2.70E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82711942 | rs213443 | G | C | rs213443 | 20889312 | 6.00E-06 | NA | 1.25 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 82713054 | rs213444 | G | C | rs213444 | 20889312 | 1.72E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 86167699 | rs2213478 | T | C | rs2213478 | 21674006 | 1.26E-06 | Schizophrenia (males) | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| X | 92696396 | rs5940196 | A | G | rs5940196 | 20889312 | 8.53E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 92712240 | rs5940215 | A | G | rs5940215 | 20889312 | 5.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 97313484 | rs1251046 | A | T | rs1251046 | 20889312 | 5.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 102524477 | rs87951 | C | T | rs87951 | 21674006 | 6.47E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| X | 113934856 | rs5988087 | C | T | rs5988087 | 19197363 | 7.14E-04 | Schizophrenia | NA | NA | 871 European ancestry cases; 863 European ancestry controls | European(1734) | ALL(1734) | EUR(1734) | ALL(1734) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
| X | 114776693 | rs4911799 | A | C | rs4911799 | 20889312 | 1.17E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 115028954 | rs9724376 | A | G | rs9724376 | 20889312 | 1.95E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 116438122 | rs6646817 | G | A | rs6646817 | 20889312 | 2.27E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 116573666 | rs5911865 | C | T | rs5911865 | 20889312 | 6.37E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 116574486 | rs5911869 | C | G | rs5911869 | 20889312 | 1.88E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 116986871 | rs883955 | G | T | rs883955 | 21674006 | 7.10E-06 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | A | NA |
| X | 121025714 | rs11796987 | G | A | rs11796987 | 19571811 | 7.23E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| X | 123397104 | rs6608182 | C | T | rs6608182 | 19571811 | 7.54E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | C | NA |
| X | 126247795 | rs1871966 | C | T | rs1871966 | 21674006 | 1.45E-04 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | G | NA |
| X | 127165414 | rs5932307 | G | A | rs5932307 | 19571811 | 2.62E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA |
| X | 130529347 | rs5977484 | G | T | rs5977484 | 19571809 | 6.32E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 139166683 | rs5907577 | C | T | rs5907577 | 20889312 | 5.00E-06 | NA | 1.27 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139214478 | rs4825220 | A | G | rs4825220 | 20889312 | 1.48E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139235492 | rs677033 | T | C | rs677033 | 20889312 | 2.34E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139238459 | rs613278 | T | C | rs613278 | 20889312 | 1.42E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139238648 | rs5909027 | C | T | rs5909027 | 20889312 | 5.56E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139314056 | rs5955415 | C | G | rs5955415 | 20889312 | 2.00E-06 | NA | 1.46 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 139314056 | rs5955415 | C | G | rs5955415 | pha002857 | 3.99E-05 | phs000021 | NA | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | G | NA | NA | NA |
| X | 139997320 | rs6528780 | C | T | rs6528780 | 21674006 | 3.38E-05 | Schizophrenia | NA | NA | 360 Japanese samples (from trios) | Japanese(360) | ALL(360) | ASN(360) | ALL(360) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, Non-U.S. Gov't | C,T | NA |
| X | 144127387 | rs6525911 | C | A | rs6525911 | 20889312 | 8.29E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 144141319 | rs6627057 | T | G | rs6627057 | 20889312 | 1.00E-06 | NA | 1.46 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 145183983 | rs4827689 | A | G | rs4827689 | 19571811 | 6.79E-05 | NA | NA | NA | 3,322 European ancestry cases; 3,587 European ancestry controls | European(6909) | ALL(6909) | EUR(6909) | ALL(6909) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA |
| X | 145599585 | rs5920191 | T | A | rs5920191 | 20889312 | 3.66E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 147381021 | rs2159767 | T | C | rs2159767 | 18347602 | 7.00E-06 | 1.33 | NA | 738 cases; 733 controls | NOPOP(1471) | ALL(1471) | NOPOP(1471) | ALL(1471) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Randomized Controlled Trial | Research Support, N.I.H., Extramural | T | |
| X | 147801125 | rs986810 | T | C | rs986810 | 19571809 | 4.04E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 150493100 | rs6627154 | A | G | rs6627154 | pha002859 | 7.13E-05 | phs000021 | NA | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| X | 150525821 | rs5969786 | A | T | rs5969786 | 19571809 | 6.53E-05 | NA | NA | NA | 2,681 European ancestry cases; 2,653 European ancestry controls; 1,286 African American cases; 973 African American controls | African American(2259) | European(5334) | ALL(7593) | AFR(2259) | EUR(5334) | ALL(7593) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | Research Support, N.I.H., Extramural |
| X | 150525821 | rs5969786 | A | T | rs5969786 | pha002859 | 7.52E-05 | phs000021 | NA | NA | NA | ALL(0) | ALL(0) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | NA | NA | A | NA | NA | NA |
| X | 152980164 | rs2266870 | T | C | rs2266870 | 20889312 | 1.19E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 152995219 | rs6643780 | G | A | rs6643780 | 20889312 | 2.16E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 153000255 | rs5987140 | T | C | rs5987140 | 20889312 | 3.37E-06 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 153006495 | rs11156606 | A | C | rs11156606 | 20889312 | 3.00E-06 | NA | 1.42 | NA | 651 European ancestry bipolar cases; 1,171 European ancestry schizophrenia cases; 2,412 European ancestry controls | European(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 153006659 | rs6643643 | A | G | rs6643643 | 20889312 | 3.92E-05 | NA | NA | NA | 651 European American bipolar cases; 1,171 European American schizophrenia cases; 2,412 European American controls | European American(4234) | ALL(4234) | EUR(4234) | ALL(4234) | Bipolar disorder and schizophrenia | HPOID:0007302 | HPOID:0100753 | Bipolar affective disorder | Schizophrenia | DOID:3312 | DOID:5419 | bipolar disorder | schizophrenia | D012559 | Schizophrenia | EFOID:0000677 | mental or behavioural disorder | Bipolar disorder |
| X | 153189819 | rs2269368 | C | T | rs2269368 | 24043878 | 4.74E-07 | NA | 1.25 | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2269368-C | Research Support, Non-U.S. Gov't | T | ARHGAP4 |
| X | 153207545 | rs2269372 | A | G | rs2269372 | 24043878 | 4.00E-08 | NA | 1.31 | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2269372-A | Research Support, Non-U.S. Gov't | A | RENBP |
| X | 153292180 | rs2734647 | T | C | rs2734647 | 24043878 | 8.78E-07 | NA | 1.28 | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2734647-C | Research Support, Non-U.S. Gov't | C | MECP2 |
| X | 153348431 | rs2239464 | A | G | rs2239464 | 24043878 | 6.71E-06 | NA | 1.26 | NA | 481 Han Chinese ancestry cases; 2,025 Han Chinese ancestry controls | Han Chinese(2506) | ALL(2506) | ASN(2506) | ALL(2506) | Schizophrenia | HPOID:0100753 | Schizophrenia | DOID:5419 | schizophrenia | D012559 | Schizophrenia | EFOID:0000692 | schizophrenia | Schizophrenia | rs2239464-G | Research Support, Non-U.S. Gov't | A | MECP2 |
Mapped by lexical matching(Total Items:0) |
|---|
| (Waiting for update.) |
Mapped by homologous gene(Total Items:1) | ||||
|---|---|---|---|---|
| HP ID | HP Name | MP ID | MP Name | Annotation |
| HP:0000488 | Retinopathy | MP:0011250 | abdominal situs ambiguus; | |
Chemical(Total Drugs:34) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| CUI | ChemicalName | ChemicalID | CasRN | DiseaseName | DiseaseID | DirectEvidence | PubMedIDs | ||
| C0036341 | s-adenosylmethionine | D012436 | 29908-03-0 | schizophrenia | MESH:D012559 | therapeutic | 18824331 | ||
| C0036341 | alprazolam | D000525 | 28981-97-7 | schizophrenia | MESH:D012559 | therapeutic | 10464538 | ||
| C0036341 | amitriptyline | D000639 | 50-48-6 | schizophrenia | MESH:D012559 | therapeutic | 434259 | ||
| C0036341 | amphetamine | D000661 | 300-62-9 | schizophrenia | MESH:D012559 | marker/mechanism | 14613675 | ||
| C0036341 | amphetamine | D000661 | 300-62-9 | schizophrenia | MESH:D012559 | therapeutic | 6817367 | ||
| C0036341 | aripiprazole | D000068180 | - | schizophrenia | MESH:D012559 | therapeutic | 12363115 | ||
| C0036341 | caffeine | D002110 | 1958/8/2 | schizophrenia | MESH:D012559 | marker/mechanism | 690092 | ||
| C0036341 | carbamazepine | D002220 | 298-46-4 | schizophrenia | MESH:D012559 | therapeutic | 10464538 | ||
| C0036341 | chlorpromazine | D002746 | 50-53-3 | schizophrenia | MESH:D012559 | therapeutic | 1103205 | ||
| C0036341 | clonidine | D003000 | 4205-90-7 | schizophrenia | MESH:D012559 | therapeutic | 4065553 | ||
| C0036341 | clozapine | D003024 | 5786-21-0 | schizophrenia | MESH:D012559 | marker/mechanism | 18806925 | ||
| C0036341 | clozapine | D003024 | 5786-21-0 | schizophrenia | MESH:D012559 | therapeutic | 10200746 | ||
| C0036341 | fenfluramine | D005277 | 458-24-2 | schizophrenia | MESH:D012559 | marker/mechanism | 4414229 | ||
| C0036341 | fluoxetine | D005473 | 54910-89-3 | schizophrenia | MESH:D012559 | therapeutic | 11910263 | ||
| C0036341 | folic acid | D005492 | 59-30-3 | schizophrenia | MESH:D012559 | therapeutic | 16641680 | ||
| C0036341 | haloperidol | D006220 | 52-86-8 | schizophrenia | MESH:D012559 | marker/mechanism | 10693159 | ||
| C0036341 | haloperidol | D006220 | 52-86-8 | schizophrenia | MESH:D012559 | therapeutic | 10200746 | ||
| C0036341 | imipramine | D007099 | 50-49-7 | schizophrenia | MESH:D012559 | therapeutic | 11910263 | ||
| C0036341 | lamotrigine | C047781 | 84057-84-1 | schizophrenia | MESH:D012559 | therapeutic | 20621163 | ||
| C0036341 | lorazepam | D008140 | 846-49-1 | schizophrenia | MESH:D012559 | therapeutic | 12095078 | ||
| C0036341 | loxapine | D008152 | 1977/10/2 | schizophrenia | MESH:D012559 | therapeutic | 10518183 | ||
| C0036341 | modafinil | C048833 | 68693-11-8 | schizophrenia | MESH:D012559 | therapeutic | 21064019 | ||
| C0036341 | olanzapine | C076029 | 132539-06-1 | schizophrenia | MESH:D012559 | therapeutic | 10327925 | ||
| C0036341 | phentermine | D010645 | 122-09-8 | schizophrenia | MESH:D012559 | marker/mechanism | 9509692 | ||
| C0036341 | procyclidine | D011352 | 77-37-2 | schizophrenia | MESH:D012559 | therapeutic | 12095078 | ||
| C0036341 | propranolol | D011433 | 525-66-6 | schizophrenia | MESH:D012559 | therapeutic | 4441828 | ||
| C0036341 | pyridoxine | D011736 | - | schizophrenia | MESH:D012559 | therapeutic | 6652165 | ||
| C0036341 | remoxipride | D017330 | 80125-14-0 | schizophrenia | MESH:D012559 | therapeutic | 8048341 | ||
| C0036341 | reserpine | D012110 | 50-55-5 | schizophrenia | MESH:D012559 | therapeutic | 6143649 | ||
| C0036341 | sulpiride | D013469 | 15676-16-1 | schizophrenia | MESH:D012559 | therapeutic | 16601995 | ||
| C0036341 | trihexyphenidyl | D014282 | 144-11-6 | schizophrenia | MESH:D012559 | therapeutic | 391328 | ||
| C0036341 | valproic acid | D014635 | 99-66-1 | schizophrenia | MESH:D012559 | therapeutic | 15737665 | ||
| C0036341 | vitamin a | D014801 | 11103-57-4 | schizophrenia | MESH:D012559 | marker/mechanism | 4810330 | ||
| C0036341 | ziprasidone | C092292 | 146939-27-7 | schizophrenia | MESH:D012559 | therapeutic | 14627778 | ||
FDA approved drug and dosage information(Total Drugs:27) | ||||||||
|---|---|---|---|---|---|---|---|---|
| DiseaseID | Drug_name | active_ingredients | strength | Dosage Form/Route | Marketing Status | TE code | RLD | RS |
| MESH:D012559 | lamictal | lamotrigine | 100MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | lamictal | lamotrigine | 100MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | lamictal | lamotrigine | 100MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | lamictal xr | lamotrigine | 25MG | TABLET, EXTENDED RELEASE;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | lamictal xr | lamotrigine | 25MG | TABLET, EXTENDED RELEASE;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | lamictal xr | lamotrigine | 25MG | TABLET, EXTENDED RELEASE;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | provigil | modafinil | 100MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | abilify | aripiprazole | 10MG | TABLET;ORAL | Prescription | AB | Yes | Yes |
| MESH:D012559 | abilify | aripiprazole | 1MG/ML Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | SOLUTION;ORAL | Discontinued | None | Yes | No |
| MESH:D012559 | abilify | aripiprazole | 10MG Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | TABLET, ORALLY DISINTEGRATING;ORAL | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 9.75MG/1.3ML (7.5MG/ML) | INJECTABLE;INTRAMUSCULAR | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 10MG | TABLET;ORAL | Prescription | AB | Yes | Yes |
| MESH:D012559 | abilify | aripiprazole | 1MG/ML Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | SOLUTION;ORAL | Discontinued | None | Yes | No |
| MESH:D012559 | abilify | aripiprazole | 10MG Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | TABLET, ORALLY DISINTEGRATING;ORAL | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 9.75MG/1.3ML (7.5MG/ML) | INJECTABLE;INTRAMUSCULAR | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 10MG | TABLET;ORAL | Prescription | AB | Yes | Yes |
| MESH:D012559 | abilify | aripiprazole | 1MG/ML Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | SOLUTION;ORAL | Discontinued | None | Yes | No |
| MESH:D012559 | abilify | aripiprazole | 10MG Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | TABLET, ORALLY DISINTEGRATING;ORAL | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 9.75MG/1.3ML (7.5MG/ML) | INJECTABLE;INTRAMUSCULAR | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 10MG | TABLET;ORAL | Prescription | AB | Yes | Yes |
| MESH:D012559 | abilify | aripiprazole | 1MG/ML Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | SOLUTION;ORAL | Discontinued | None | Yes | No |
| MESH:D012559 | abilify | aripiprazole | 10MG Federal Register determination that product was not discontinued or withdrawn for safety or efficacy reasons | TABLET, ORALLY DISINTEGRATING;ORAL | Discontinued | None | No | No |
| MESH:D012559 | abilify | aripiprazole | 9.75MG/1.3ML (7.5MG/ML) | INJECTABLE;INTRAMUSCULAR | Discontinued | None | No | No |
| MESH:D012559 | zyprexa | olanzapine | 2.5MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | zyprexa | olanzapine | 10MG/VIAL | INJECTABLE;INTRAMUSCULAR | Prescription | AP | Yes | Yes |
| MESH:D012559 | zyprexa | olanzapine | 2.5MG | TABLET;ORAL | Prescription | AB | Yes | No |
| MESH:D012559 | zyprexa | olanzapine | 10MG/VIAL | INJECTABLE;INTRAMUSCULAR | Prescription | AP | Yes | Yes |
FDA labeling changes(Total Drugs:27) | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DiseaseID | Pediatric_Labeling_Date | Trade_Name | Generic_Name_or_Proper_Name | Indications Studied | Label Changes Summary | Product Labeling | BPCA(B) | PREA(P) | BPCA(B) and PREA(P) | Pediatric Rule (R) | Sponsor | Pediatric Exclusivity Granted Date | NNPS |
| MESH:D012559 | 01/17/2003 | lamictal | lamotrigine | Adjunctive therapy for partial seizures | Extended indication from adults to pediatric patients e 2 years Patients aged 2 - 18 years had clearance influenced predominantly by total body weight and concurrent antiepileptic drug (AED) therapy. The oral clearance was higher, on a body weight basis, in pediatric patients than in adults Because of increased clearance in pediatrics, maintenance doses in patients weighing < 30 kg may need an increase of as much as 50% based upon clinical response Evidence shows that the inclusion of VPA in a multi-drug regimen increases the risk of serious, potentially life-threatening rash in pediatric patients Approximately 11.5% of the 1,081 pediatric patients who received the drug as adjunctive therapy in clinical trials discontinued treatment because of an AE | Labeling | B | - | - | - | GlaxoSmithKline | 02/14/2007 | FALSE' |
| MESH:D012559 | 8/5/2009 | lamictal | lamotrigine | Adjunctive treatment for partial seizures in pediatric patients 1 24 months | Safety and effectiveness as adjunctive treatment for partial seizures were not demonstrated in a small randomized, double-blind, placebo-controlled, withdrawal study in pediatric patients 1 - 24 months Immediate release tablets were associated with an increased risk for infectious adverse reactions including bronchiolitis, bronchitis, ear infection, eye infection, otitis externa, pharyngitis, urinary tract infection, and viral infection (Lamictal 37%, Placebo 5%), and respiratory adverse reactions including nasal congestion, cough, and apnea. (Lamictal 26%, Placebo 5%) | Labeling | B | - | - | - | GlaxoSmithKline | 02/14/2007 | FALSE' |
| MESH:D012559 | 05/18/2015 | lamictal | lamotrigine | Maintenance treatment of bipolar disorder | Safety and efficacy for the maintenance treatment of bipolar disorder were not established in a double-blind, placebo-controlled trial that evaluated 301 pediatric patients aged 10 to 17 Information on clinical trial and adverse reactions Postmarketing study | Labeling | - | P | - | - | GlaxoSmithKline | - | FALSE |
| MESH:D012559 | 05/29/2009 | lamictal xr | lamotrigine | Adjunctive therapy for partial onset seizures in patients e13 years of age | Extended release tablets are indicated as adjunctive therapy for partial onset seizures with or without secondary generalization in patients e13 years Safety and effectiveness of extended release tablets for any use in patients below the age of 13 have not been established Information on adverse event profile, and clinical studies New dosage form | Labeling | - | P | - | - | GlaxoSmithKline | - | FALSE' |
| MESH:D012559 | 01/29/2010 | lamictal xr | lamotrigine | Adjunctive therapy for Primary Generalized Tonic-Clonic seizures | New indication for adjunctive therapy for primary generalized tonic-clonic seizures in patients e 13 years of age Safety and effectiveness for any use in patients < 13 years have not been established Information on dosing, adverse reactions, and clinical studies | Labeling | - | P | - | - | GlaxoSmithKline | - | FALSE' |
| MESH:D012559 | 04/25/2011 | lamictal xr | lamotrigine | Monotherapy in patients 13 years of age and older with partial seizures who are receiving therapy with a single antiepileptic drug (AED) | Approved for conversion to monotherapy in patients e13 years of age with partial seizures receiving treatment with a single antiepileptic drug (AED).Safety and effectiveness have not been established (1) as initial monotherapy or (2) for simultaneous conversion to monotherapy from two or more concomitant AEDsInformation on conversion to monotherapy, adverse reactions, clinical trialNew indication | Labeling | - | P | - | - | GlaxoSmithKline | - | FALSE' |
| MESH:D012559 | 08/17/2007 | provigil | modafinil | Narcolepsy | Modafinil is not approved for use in pediatric patients for any indication Safety and effectiveness were not demonstrated in a controlled 6-week study in 165 pediatric patients 5-17 years with narcolepsy Serious rash, including Stevens-Johnson Syndrome, requiring hospitalization and discontinuation of treatment has been reported in adults and children in association with the use of modafinil In the controlled and open-label clinical studies, treatment emergent adverse events of the psychiatric and nervous system included Tourettes syndrome, insomnia, hostility, increased cataplexy, increased hypnagogic hallucinations and suicidal ideation Information on safety, AEs and clinical study | Labeling | B | - | - | - | Cephalon, Inc | 03/21/2006 | FALSE' |
| MESH:D012559 | 10/29/2007 | abilify | aripiprazole | Schizophrenia | Extended schizophrenia indication from adults to adolescents 1317 years Safety and effectiveness in pediatric patients with bipolar mania or agitation associated with schizophrenia or bipolar mania have not been established Efficacy for the maintenance treatment of schizophrenia in the pediatric population has not been evaluated In 6-week placebo controlled efficacy trial in patients 13 17 years with Schizophrenia 30 mg/day was not shown to be more efficacious than 10 mg/day Common adverse events observed were extrapyramidal disorder, somnolence, and tremor; these 3 AEs appear to have a possible dose response relationship Information on dose, AEs, clinical studies | Labeling | B | - | - | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 10/29/2007 | abilify | aripiprazole | Schizophrenia | Extended schizophrenia indication from adults to adolescents 1317 years Safety and effectiveness in pediatric patients with bipolar mania or agitation associated with schizophrenia or bipolar mania have not been established Efficacy for the maintenance treatment of schizophrenia in the pediatric population has not been evaluated In 6-week placebo controlled efficacy trial in patients 13 17 years with Schizophrenia 30 mg/day was not shown to be more efficacious than 10 mg/day Common adverse events observed were extrapyramidal disorder, somnolence, and tremor; these 3 AEs appear to have a possible dose response relationship Information on dose, AEs, clinical studies | Labeling | B | - | - | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 10/29/2007 | abilify | aripiprazole | Schizophrenia | Extended schizophrenia indication from adults to adolescents 1317 years Safety and effectiveness in pediatric patients with bipolar mania or agitation associated with schizophrenia or bipolar mania have not been established Efficacy for the maintenance treatment of schizophrenia in the pediatric population has not been evaluated In 6-week placebo controlled efficacy trial in patients 13 17 years with Schizophrenia 30 mg/day was not shown to be more efficacious than 10 mg/day Common adverse events observed were extrapyramidal disorder, somnolence, and tremor; these 3 AEs appear to have a possible dose response relationship Information on dose, AEs, clinical studies | Labeling | B | - | - | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 10/29/2007 | abilify | aripiprazole | Schizophrenia | Extended schizophrenia indication from adults to adolescents 1317 years Safety and effectiveness in pediatric patients with bipolar mania or agitation associated with schizophrenia or bipolar mania have not been established Efficacy for the maintenance treatment of schizophrenia in the pediatric population has not been evaluated In 6-week placebo controlled efficacy trial in patients 13 17 years with Schizophrenia 30 mg/day was not shown to be more efficacious than 10 mg/day Common adverse events observed were extrapyramidal disorder, somnolence, and tremor; these 3 AEs appear to have a possible dose response relationship Information on dose, AEs, clinical studies | Labeling | B | - | - | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 02/27/2008 | abilify | aripiprazole | Bipolar I Disorder | Extended treatment of acute Bipolar Disorder indication from adults to pediatrics 1017 years The efficacy for the maintenance treatment of Bipolar Disorder in the pediatric population has not been evaluated The recommended target dose in Bipolar Disorder is 10 mg/day. In the study of pediatric patients 10 17 years with Bipolar Mania, 4 common adverse reactions had a possible dose response relationship at 4 weeks; extrapyramidal disorder, somnolence, akathisia and salivary hypersecretion Information on dose, AEs, clinical studies | Labeling | - | - | B, P | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 02/27/2008 | abilify | aripiprazole | Bipolar I Disorder | Extended treatment of acute Bipolar Disorder indication from adults to pediatrics 1017 years The efficacy for the maintenance treatment of Bipolar Disorder in the pediatric population has not been evaluated The recommended target dose in Bipolar Disorder is 10 mg/day. In the study of pediatric patients 10 17 years with Bipolar Mania, 4 common adverse reactions had a possible dose response relationship at 4 weeks; extrapyramidal disorder, somnolence, akathisia and salivary hypersecretion Information on dose, AEs, clinical studies | Labeling | - | - | B, P | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 02/27/2008 | abilify | aripiprazole | Bipolar I Disorder | Extended treatment of acute Bipolar Disorder indication from adults to pediatrics 1017 years The efficacy for the maintenance treatment of Bipolar Disorder in the pediatric population has not been evaluated The recommended target dose in Bipolar Disorder is 10 mg/day. In the study of pediatric patients 10 17 years with Bipolar Mania, 4 common adverse reactions had a possible dose response relationship at 4 weeks; extrapyramidal disorder, somnolence, akathisia and salivary hypersecretion Information on dose, AEs, clinical studies | Labeling | - | - | B, P | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 02/27/2008 | abilify | aripiprazole | Bipolar I Disorder | Extended treatment of acute Bipolar Disorder indication from adults to pediatrics 1017 years The efficacy for the maintenance treatment of Bipolar Disorder in the pediatric population has not been evaluated The recommended target dose in Bipolar Disorder is 10 mg/day. In the study of pediatric patients 10 17 years with Bipolar Mania, 4 common adverse reactions had a possible dose response relationship at 4 weeks; extrapyramidal disorder, somnolence, akathisia and salivary hypersecretion Information on dose, AEs, clinical studies | Labeling | - | - | B, P | - | Otsuka | 11/14/2007 | FALSE' |
| MESH:D012559 | 11/19/2009 | abilify | aripiprazole | Irritability associated with autistic disorder | Safety and effectiveness in pediatric patients demonstrating irritability associated with autistic disorder were established in two placebo-controlled clinical trials in pediatric patients 6 - 17 years of age Most common adverse reactions observed in pediatric clinical trials in patients with autistic disorder included sedation, fatigue, vomiting, somnolence, tremor, pyrexia, drooling, decreased appetite, salivary hypersecretion, extrapyramidal disorder, and lethargy. Fatigue was a possible dose-response adverse reaction. Information on dosing, adverse reactions, and clinical studies | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 11/19/2009 | abilify | aripiprazole | Irritability associated with autistic disorder | Safety and effectiveness in pediatric patients demonstrating irritability associated with autistic disorder were established in two placebo-controlled clinical trials in pediatric patients 6 - 17 years of age Most common adverse reactions observed in pediatric clinical trials in patients with autistic disorder included sedation, fatigue, vomiting, somnolence, tremor, pyrexia, drooling, decreased appetite, salivary hypersecretion, extrapyramidal disorder, and lethargy. Fatigue was a possible dose-response adverse reaction. Information on dosing, adverse reactions, and clinical studies | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 11/19/2009 | abilify | aripiprazole | Irritability associated with autistic disorder | Safety and effectiveness in pediatric patients demonstrating irritability associated with autistic disorder were established in two placebo-controlled clinical trials in pediatric patients 6 - 17 years of age Most common adverse reactions observed in pediatric clinical trials in patients with autistic disorder included sedation, fatigue, vomiting, somnolence, tremor, pyrexia, drooling, decreased appetite, salivary hypersecretion, extrapyramidal disorder, and lethargy. Fatigue was a possible dose-response adverse reaction. Information on dosing, adverse reactions, and clinical studies | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 11/19/2009 | abilify | aripiprazole | Irritability associated with autistic disorder | Safety and effectiveness in pediatric patients demonstrating irritability associated with autistic disorder were established in two placebo-controlled clinical trials in pediatric patients 6 - 17 years of age Most common adverse reactions observed in pediatric clinical trials in patients with autistic disorder included sedation, fatigue, vomiting, somnolence, tremor, pyrexia, drooling, decreased appetite, salivary hypersecretion, extrapyramidal disorder, and lethargy. Fatigue was a possible dose-response adverse reaction. Information on dosing, adverse reactions, and clinical studies | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 9/6/2014 | abilify | aripiprazole | Maintenance treatment of irritability associated with autistic disorder | Efficacy for the maintenance treatment of irritability associated with autistic disorder was not established in a 12 week clinical trial in 85 pediatric patients 6-17 years Information on clinical trialPostmarketing study | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 9/6/2014 | abilify | aripiprazole | Maintenance treatment of irritability associated with autistic disorder | Efficacy for the maintenance treatment of irritability associated with autistic disorder was not established in a 12 week clinical trial in 85 pediatric patients 6-17 years Information on clinical trialPostmarketing study | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 9/6/2014 | abilify | aripiprazole | Maintenance treatment of irritability associated with autistic disorder | Efficacy for the maintenance treatment of irritability associated with autistic disorder was not established in a 12 week clinical trial in 85 pediatric patients 6-17 years Information on clinical trialPostmarketing study | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 9/6/2014 | abilify | aripiprazole | Maintenance treatment of irritability associated with autistic disorder | Efficacy for the maintenance treatment of irritability associated with autistic disorder was not established in a 12 week clinical trial in 85 pediatric patients 6-17 years Information on clinical trialPostmarketing study | Labeling | - | P | - | - | Otsuka | - | FALSE' |
| MESH:D012559 | 08/14/2008 | zyprexa | olanzapine | schizophrenia; bipolar disorder | Safety and effectiveness have not been established for patients less than 18 years of age In an analysis of placebo-controlled olanzapine monotherapy studies of adolescent patients, including those with schizophrenia or bipolar disorder, olanzapine was associated with: oHyperglycemia - a statistically significantly greater mean change in fasting glucose levels compared to placebo oHyperlipidemia statistically significant increases compared to placebo in fasting triglycerides, fasting total cholesterol and fasting LDL cholesterol oWeight gain olanzapine treated patients gained an average of 4.6 kg, compared to an average of 0.3 kg in placebo-treated patients with a median exposure of 3 weeks; Average weight gain during long-term therapy was 7.4 kg | - | B | - | - | - | Lilly | 10/1/2007 | FALSE' |
| MESH:D012559 | 08/14/2008 | zyprexa | olanzapine | schizophrenia; bipolar disorder | Safety and effectiveness have not been established for patients less than 18 years of age In an analysis of placebo-controlled olanzapine monotherapy studies of adolescent patients, including those with schizophrenia or bipolar disorder, olanzapine was associated with: oHyperglycemia - a statistically significantly greater mean change in fasting glucose levels compared to placebo oHyperlipidemia statistically significant increases compared to placebo in fasting triglycerides, fasting total cholesterol and fasting LDL cholesterol oWeight gain olanzapine treated patients gained an average of 4.6 kg, compared to an average of 0.3 kg in placebo-treated patients with a median exposure of 3 weeks; Average weight gain during long-term therapy was 7.4 kg | - | B | - | - | - | Lilly | 10/1/2007 | FALSE' |
| MESH:D012559 | 4/12/2009 | zyprexa | olanzapine | Treatment of manic or mixed episodes of bipolar I disorder and schizophrenia in adolescents ages 13-17 | Extended schizophrenia and manic or mixed episodes of bipolar I disorder indications from adults to adolescents 1317 years of age Safety and effectiveness in children < 13 years of age have not been established Recommended starting dose for adolescents is lower than that for adults Compared to patients from adult clinical trials, adolescents were likely to gain more weight, experience increased sedation, and have greater increases in total cholesterol, triglycerides, LDL cholesterol, prolactin and hepatic transaminase levels Information on dosing, adverse reactions, pharmacokinetics, clinical studies | Labeling | B | - | - | - | Lilly | 10/1/2007 | TRUE' |
| MESH:D012559 | 4/12/2009 | zyprexa | olanzapine | Treatment of manic or mixed episodes of bipolar I disorder and schizophrenia in adolescents ages 13-17 | Extended schizophrenia and manic or mixed episodes of bipolar I disorder indications from adults to adolescents 1317 years of age Safety and effectiveness in children < 13 years of age have not been established Recommended starting dose for adolescents is lower than that for adults Compared to patients from adult clinical trials, adolescents were likely to gain more weight, experience increased sedation, and have greater increases in total cholesterol, triglycerides, LDL cholesterol, prolactin and hepatic transaminase levels Information on dosing, adverse reactions, pharmacokinetics, clinical studies | Labeling | B | - | - | - | Lilly | 10/1/2007 | TRUE' |