rheumatic heart disease |
Disease ID | 474 |
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Disease | rheumatic heart disease |
Manually Symptom | (Waiting for update.) |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:13) C0232197 | fibrillation | 9 C0232605 | regurgitation | 6 C0026269 | mitral stenosis | 6 C0018801 | heart failure | 4 C0035436 | rheumatic fever | 4 C0015967 | fever | 3 C0020538 | hypertension | 2 C0020542 | pulmonary hypertension | 2 C0741299 | atrial thrombus | 1 C0026266 | mitral regurgitation | 1 C0003504 | aortic regurgitation | 1 C0020807 | pulmonary hemosiderosis | 1 C0019114 | hemosiderosis | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:4) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs121917864 | 17096074 | 7097 | TLR2 | umls:C0035439 | BeFree | The lack of genetic association of the Toll-like receptor 2 (TLR2) Arg753Gln and Arg677Trp polymorphisms with rheumatic heart disease. | 0.000542884 | 2007 | TLR2 | 4 | 153704936 | C | T |
rs2476601 | 21384170 | 26191 | PTPN22 | umls:C0035439 | BeFree | No association of PTPN22 R620W gene polymorphism with rheumatic heart disease and systemic lupus erythematosus. | 0.000542884 | 2011 | PTPN22;AP4B1-AS1 | 1 | 113834946 | A | G |
rs5743708 | 19693643 | 7097 | TLR2 | umls:C0035439 | BeFree | No association of the TLR2 gene Arg753Gln polymorphism with rheumatic heart disease and Behçet's disease. | 0.000542884 | 2009 | TLR2 | 4 | 153705165 | G | A |
rs5743708 | 17096074 | 7097 | TLR2 | umls:C0035439 | BeFree | The lack of genetic association of the Toll-like receptor 2 (TLR2) Arg753Gln and Arg677Trp polymorphisms with rheumatic heart disease. | 0.000542884 | 2007 | TLR2 | 4 | 153705165 | G | A |
GWASdb Annotation(Total Genotypes:1) | |||||||||||||||||||||||||||||||||||||
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Chr | Pos | SNP_Id | RefGene | EnsemblGene | ENCODE_Factor | ENCODE_TFBS | Chromosome_interaction | GTEx_eQTL | SNP_TFBS_affinity_GWAS3D | SNP_miRNA_target_affinity_PolymiRTS | SNP_splicing_effect_Skippy | SNP_splicing_effect_MutPred_Splice | SNP_ns_protein_effect_dbNSFP | SNP_syn_effect_Silva | SNP_phosphorylation_effect_PhosSNP | PhastCons_score | PhyloP_score | GERP++_RS | Segway_state | Ancestral_allele | ESP_AF | ESP_AFR | ESP_AFR | ESP_EUR | TG_ASN | TG_AMR | TG_AFR | TG_EUR | Type | Consequence | bStatistic | EncH3K27Ac | EncH3K4Me1 | EncH3K4Me3 | EncNucleo | OMIM | Clinvar |
1 | 25623967 | rs1830962 | NM_016124,RHD | NM_001127691,RHD | ENST00000423810,ENSG00000187010 | ENST00000454452,ENSG00000187010 | ENST00000419831,ENSG00000187010 | ENST00000417538,ENSG00000187010 | ENST00000342055,ENSG00000187010 | ENST00000328664,ENSG00000187010 | ENST00000357542,ENSG00000187010 | ENST00000423253,ENSG00000187010 | NA | NA | chr1,25620001,25630000,chr1,24940001,24950000,26,Hi-C | chr1,25620001,25630000,chr1,26800001,26810000,28,Hi-C | chr1,25620001,25630000,chr6,13850001,13860000,32,Hi-C | chr1,25620001,25630000,chr7,75520001,75530000,32,Hi-C | chr1,25620001,25630000,chr1,25840001,25850000,38,Hi-C | chr1,25620001,25630000,chr14,91530001,91540000,41,Hi-C | chr1,25620001,25630000,chr1,39520001,39530000,43,Hi-C | chr1,25620001,25630000,chr7,23360001,23370000,57,Hi-C | chr1,25620001,25630000,chr9,110850001,110860000,5,Hi-C | chr1,25620001,25630000,chr12,110700001,110710000,5,Hi-C | chr1,25620001,25630000,chr1,38860001,38870000,6,Hi-C | chr1,25620001,25630000,chr4,71170001,71180000,9,Hi-C | chr1,25620001,25630000,chr1,25530001,25540000,6,Hi-C | chr1,25620001,25630000,chr1,84750001,84760000,6,Hi-C | chr1,25620001,25630000,chr1,6300001,6310000,10,Hi-C | chr1,25620001,25630000,chr1,151620001,151630000,18,Hi-C | chr1,25620001,25630000,chr1,25720001,25730000,32,Hi-C | NA | Cutl1_3494,22.9811 | Cutl1_3494,203.113 | Cutl1_3494,1.8036 | Cutl1_3494,1.3934 | Cutl1_3494,3.5869 |
GWASdb Snp Trait(Total Genotypes:0) | |
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(Waiting for update.) |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:0) | |
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(Waiting for update.) |
FDA approved drug and dosage information(Total Drugs:0) | |
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(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |