retinal vasculitis |
Disease ID | 1075 |
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Disease | retinal vasculitis |
Integrated Phenotype | (Waiting for update.) |
Text Mined Phenotype | HPO | Name | Sentences' Count(Total Phenotypes:17) HP:0000554 | Uveitis | 8 HP:0012123 | Posterior uveitis | 8 HP:0000572 | Visual loss | 3 HP:0012121 | Panuveitis | 2 HP:0000618 | Blindness | 2 HP:0000573 | Retinal hemorrhage | 2 HP:0011531 | Hyalitis | 1 HP:0100533 | Ocular inflammation | 1 HP:0002960 | Autoimmune condition | 1 HP:0003613 | Antiphospholipid antibodies | 1 HP:0100653 | Optic neuritis | 1 HP:0000488 | Noninflammatory retina disease | 1 HP:0012636 | Retinal vein occlusion | 1 HP:0000648 | Optic-nerve degeneration | 1 HP:0000999 | Pyoderma | 1 HP:0002725 | Systemic lupus erythematosus | 1 HP:0040049 | Macular edema | 1 |
Disease ID | 1075 |
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Disease | retinal vasculitis |
Manually Symptom | (Waiting for update.) |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:3) |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:1) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs12569232 | 24020968 | 7188 | TRAF5 | umls:C0152026 | BeFree | Further stratified analysis according to the clinical and laboratory observations suggested that rs12569232/TRAF5 may play a role in the development of retinal vasculitis. | 0.000271442 | 2013 | NA | 1 | 211379722 | G | C |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:5) | |||||||||||||||||||||||||||||
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CHR | POS | SNPID | REF | ALT | ORI_SNPID | PMID | P_VALUE | P_VALUE_TEXT | OR/BETA | CI95_TEXT | GWAS_INITIAL_SAMPLE_SIZE | SUB_POPULATION | SUPER_POPULATION | GWAS_TRAIT | HPO_ID | HPO_TERM | DO_ID | DO_TERM | MESH_ID | MESH_TERM | EFO_ID | EFO_TERM | DOLITE_TERM | RISK_ALLELE | PUBLICATION_TYPE | AA | GENE_SYMBOL | TYPE | REFGENE |
5 | 87847586 | rs17421627 | T | G | rs17421627 | 21060863 | 7.00E-16 | Retinal venular caliber | 3 | [2.27-3.73] um increase | 15,358 Caucasian individuals | Caucasian(15358) | ALL(15358) | EUR(15358) | ALL(15358) | Retinal vascular caliber | HPOID:0000630 | Abnormality of retinal arteries | DOID:2462 | DOID:1287 | retinal vascular disease | cardiovascular system disease | D031300 | Retinal Vasculitis | EFOID:0004731 | eye measurement | Retinal disease | Cardiovascular disease | rs17421627-G |
6 | 142548099 | rs225717 | C | T | rs225717 | 21060863 | 1.00E-16 | Retinal venular caliber | 1.9 | [1.45-2.35] uM decrease | 15,358 Caucasian individuals | Caucasian(15358) | ALL(15358) | EUR(15358) | ALL(15358) | Retinal vascular caliber | HPOID:0000630 | Abnormality of retinal arteries | DOID:2462 | DOID:1287 | retinal vascular disease | cardiovascular system disease | D031300 | Retinal Vasculitis | EFOID:0004731 | eye measurement | Retinal disease | Cardiovascular disease | rs225717-C |
8 | 11104111 | rs7824557 | G | A | rs7824557 | 21060863 | 4.00E-07 | Retinal venular caliber | 1 | [0.61-1.39] um increase | 15,358 Caucasian individuals | Caucasian(15358) | ALL(15358) | EUR(15358) | ALL(15358) | Retinal vascular caliber | HPOID:0000630 | Abnormality of retinal arteries | DOID:2462 | DOID:1287 | retinal vascular disease | cardiovascular system disease | D031300 | Retinal Vasculitis | EFOID:0004731 | eye measurement | Retinal disease | Cardiovascular disease | rs7824557-G |
12 | 111910219 | rs10774625 | A | G | rs10774625 | 21060863 | 2.00E-13 | Retinal venular caliber | 1.5 | [1.11-1.89] um increase | 15,358 Caucasian individuals | Caucasian(15358) | ALL(15358) | EUR(15358) | ALL(15358) | Retinal vascular caliber | HPOID:0000630 | Abnormality of retinal arteries | DOID:2462 | DOID:1287 | retinal vascular disease | cardiovascular system disease | D031300 | Retinal Vasculitis | EFOID:0004731 | eye measurement | Retinal disease | Cardiovascular disease | rs10774625-A |
19 | 49228272 | rs2287921 | T | C | rs2287921 | 21060863 | 2.00E-25 | Retinal venular caliber | 2.1 | [1.71-2.49] uM decrease | 15,358 Caucasian individuals | Caucasian(15358) | ALL(15358) | EUR(15358) | ALL(15358) | Retinal vascular caliber | HPOID:0000630 | Abnormality of retinal arteries | DOID:2462 | DOID:1287 | retinal vascular disease | cardiovascular system disease | D031300 | Retinal Vasculitis | EFOID:0004731 | eye measurement | Retinal disease | Cardiovascular disease | rs2287921-T |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:3) | |||||||||
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CUI | ChemicalName | ChemicalID | CasRN | DiseaseName | DiseaseID | DirectEvidence | PubMedIDs | ||
C0152026 | carmustine | D002330 | 154-93-8 | retinal vasculitis | MESH:D031300 | marker/mechanism | 6747681 | ||
C0152026 | rifabutin | D017828 | 72559-06-9 | retinal vasculitis | MESH:D031300 | marker/mechanism | 16321897 | ||
C0152026 | ticlopidine | D013988 | 55142-85-3 | retinal vasculitis | MESH:D031300 | marker/mechanism | 10844073 |
FDA approved drug and dosage information(Total Drugs:0) | |
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(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |