pain disorder |
Disease ID | 1410 |
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Disease | pain disorder |
Integrated Phenotype | (Waiting for update.) |
Text Mined Phenotype | HPO | Name | Sentences' Count(Total Phenotypes:14) HP:0012532 | Chronic pain | 20 HP:0012531 | Pain | 13 HP:0000716 | Depression | 6 HP:0000739 | Anxiety | 5 HP:0012533 | Allodynia | 3 HP:0003418 | Back pain | 3 HP:0001513 | Obesity | 3 HP:0003419 | Low back pain | 2 HP:0030833 | Neck pain | 2 HP:0006824 | Cranial nerve palsy | 1 HP:0000708 | Behavioral problems | 1 HP:0012378 | Fatigue | 1 HP:0200025 | Mandibular pain | 1 HP:0002360 | Sleep disturbance | 1 |
Disease ID | 1410 |
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Disease | pain disorder |
Manually Symptom | (Waiting for update.) |
Text Mined Symptom | (Waiting for update.) |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:2) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs375828897 | 25116815 | 6335 | SCN9A | umls:C0391976 | BeFree | Genetic testing for ion channel-associated pain disorders revealed an amino acid R1150W substitution of the Nav1.7 sodium channel. | 0.005971721 | 2014 | SCN9A;LOC101929680 | 2 | 166242645 | T | A |
rs398123010 | 24564660 | 8989 | TRPA1 | umls:C0391976 | BeFree | Remarkably, a substitution of single amino acid in the S4-S5 region of TRPA1 (N855S) has been recently associated with familial episodic pain syndrome. | 0.001357209 | 2014 | TRPA1;LOC100132891 | 8 | 72034369 | T | C |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:4) | |||||||||||||||||||||||||||||
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CHR | POS | SNPID | REF | ALT | ORI_SNPID | PMID | P_VALUE | P_VALUE_TEXT | OR/BETA | CI95_TEXT | GWAS_INITIAL_SAMPLE_SIZE | SUB_POPULATION | SUPER_POPULATION | GWAS_TRAIT | HPO_ID | HPO_TERM | DO_ID | DO_TERM | MESH_ID | MESH_TERM | EFO_ID | EFO_TERM | DOLITE_TERM | RISK_ALLELE | PUBLICATION_TYPE | AA | GENE_SYMBOL | TYPE | REFGENE |
1 | 96145968 | rs6693882 | A | G | rs6693882 | 19207018 | 2.00E-06 | post-operative pain onset time | NA | NA | 60 females; 52 males | NOPOP(112) | ALL(112) | NOPOP(112) | ALL(112) | Pain | HPOID:0009763 | Limb pain | DOID:0060164 | pain disorder | D010146 | Pain | EFOID:0003843 | pain | Psychotic disorder | NA | Research Support, N.I.H., Intramural | A | NA |
5 | 10169823 | rs13361160 | T | C | rs13361160 | 22956598 | 5.00E-07 | NA | 1.17 | [1.10-1.24] | 1,308 female European ancestry cases; 5,791 female European ancestry controls | European(7099) | ALL(7099) | EUR(7099) | ALL(7099) | Pain | HPOID:0009763 | Limb pain | DOID:0060164 | pain disorder | D010146 | Pain | EFOID:0003843 | pain | Psychotic disorder | rs13361160-C | Meta-Analysis | Research Support, Non-U.S. Gov't | T |
11 | 118145686 | rs17122021 | C | T | rs17122021 | 19207018 | 7.00E-07 | maximum post-operative pain rating | NA | NA | 60 females; 52 males | NOPOP(112) | ALL(112) | NOPOP(112) | ALL(112) | Pain | HPOID:0009763 | Limb pain | DOID:0060164 | pain disorder | D010146 | Pain | EFOID:0003843 | pain | Psychotic disorder | NA | Research Support, N.I.H., Intramural | T,C | NA |
19 | 21666210 | rs2562456 | C | T | rs2562456 | 19207018 | 2.00E-10 | onset time of analgesia | NA | NA | 60 females; 52 males | NOPOP(112) | ALL(112) | NOPOP(112) | ALL(112) | Pain | HPOID:0009763 | Limb pain | DOID:0060164 | pain disorder | D010146 | Pain | EFOID:0003843 | pain | Psychotic disorder | NA | Research Support, N.I.H., Intramural | A | NA |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:0) | |
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(Waiting for update.) |
FDA approved drug and dosage information(Total Drugs:0) | |
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(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |