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Pediatric Disease Annotations & Medicines



   mds
  

Disease ID 1648
Disease mds
Definition
A rare syndrome caused by deletion of genetic material in the short arm of chromosome 17. It is characterized by an abnormally smooth brain with fewer folds and grooves. It results in intellectual disability, developmental delay, seizures, spasticity, hypotonia, and feeding difficulties. Affected individuals have distinctive facial features that include a prominent forehead, midface hypoplasia, small, upturned nose, low-set ears, small jaw, and thick upper lip.
Synonym
chromosome 17p13.3 deletion syndrome
lissencephaly syndrome
lissencephaly syndrome, miller dieker
lissencephaly syndrome, miller-dieker
lissencephaly, miller dieker
lissencephaly, miller-dieker
mdls
miller dieker lissencephaly syndrome
miller dieker syndrome
miller dieker syndrome (disorder)
miller-dieker lissencephaly
miller-dieker lissencephaly syndrome
miller-dieker syndrome
miller-dieker syndrome (disorder)
miller-dieker syndrome (disorder) [ambiguous]
syndrome, miller-dieker
syndrome, miller-dieker lissencephaly
Orphanet
OMIM
DOID
UMLS
C0265219
SNOMED-CT
Curated Gene
Entrez_id | Symbol | Resource(Total Genes:3)
HIC1  |  3090  |  ORPHANET
YWHAE  |  7531  |  ORPHANET
PAFAH1B1  |  5048  |  ORPHANET
Inferring Gene(Waiting for update.)
Text Mined Gene
Entrez_id | Symbol | Score | Resource(Total Genes:184)
608  |  TNFRSF17  |  DISEASES
5982  |  RFC2  |  DISEASES
4335  |  MNT  |  DISEASES
7380  |  UPK3A  |  DISEASES
2937  |  GSS  |  DISEASES
4350  |  MPG  |  DISEASES
57030  |  SLC17A7  |  DISEASES
268  |  AMH  |  DISEASES
3199  |  HOXA2  |  DISEASES
2218  |  FKTN  |  DISEASES
4048  |  LTA4H  |  DISEASES
9896  |  FIG4  |  DISEASES
9450  |  LY86  |  DISEASES
374291  |  NDUFS7  |  DISEASES
566  |  AZU1  |  DISEASES
1746  |  DLX2  |  DISEASES
51426  |  POLK  |  DISEASES
4620  |  MYH2  |  DISEASES
8192  |  CLPP  |  DISEASES
7408  |  VASP  |  DISEASES
10047  |  CST8  |  DISEASES
57152  |  SLURP1  |  DISEASES
53947  |  A4GALT  |  DISEASES
9098  |  USP6  |  DISEASES
1890  |  TYMP  |  DISEASES
3975  |  LHX1  |  DISEASES
269  |  AMHR2  |  DISEASES
5004  |  ORM1  |  DISEASES
109  |  ADCY3  |  DISEASES
1559  |  CYP2C9  |  DISEASES
23314  |  SATB2  |  DISEASES
4001  |  LMNB1  |  DISEASES
9043  |  SPAG9  |  DISEASES
25939  |  SAMHD1  |  DISEASES
5050  |  PAFAH1B3  |  DISEASES
1801  |  DPH1  |  DISEASES
57192  |  MCOLN1  |  DISEASES
7348  |  UPK1B  |  DISEASES
57679  |  ALS2  |  DISEASES
7531  |  YWHAE  |  DISEASES
2891  |  GRIA2  |  DISEASES
8626  |  TP63  |  DISEASES
64083  |  GOLPH3  |  DISEASES
51608  |  GET4  |  DISEASES
55117  |  SLC6A15  |  DISEASES
593  |  BCKDHA  |  DISEASES
57689  |  LRRC4C  |  DISEASES
6094  |  ROM1  |  DISEASES
6911  |  TBX6  |  DISEASES
5805  |  PTS  |  DISEASES
115106  |  HAUS1  |  DISEASES
5013  |  OTX1  |  DISEASES
3672  |  ITGA1  |  DISEASES
170692  |  ADAMTS18  |  DISEASES
10750  |  GRAP  |  DISEASES
23643  |  LY96  |  DISEASES
7476  |  WNT7A  |  DISEASES
9601  |  PDIA4  |  DISEASES
26060  |  APPL1  |  DISEASES
7484  |  WNT9B  |  DISEASES
1487  |  CTBP1  |  DISEASES
81570  |  CLPB  |  DISEASES
7203  |  CCT3  |  DISEASES
8320  |  EOMES  |  DISEASES
50852  |  TRAT1  |  DISEASES
4724  |  NDUFS4  |  DISEASES
9317  |  PTER  |  DISEASES
5479  |  PPIB  |  DISEASES
6632  |  SNRPD1  |  DISEASES
1398  |  CRK  |  DISEASES
64127  |  NOD2  |  DISEASES
7846  |  TUBA1A  |  DISEASES
474  |  ATOH1  |  DISEASES
7804  |  LRP8  |  DISEASES
29  |  ABR  |  DISEASES
154  |  ADRB2  |  DISEASES
26287  |  ANKRD2  |  DISEASES
9451  |  EIF2AK3  |  DISEASES
8028  |  MLLT10  |  DISEASES
794  |  CALB2  |  DISEASES
285704  |  RGMB  |  DISEASES
81793  |  TLR10  |  DISEASES
1466  |  CSRP2  |  DISEASES
1488  |  CTBP2  |  DISEASES
493829  |  TRIM72  |  DISEASES
3090  |  HIC1  |  DISEASES
4728  |  NDUFS8  |  DISEASES
4302  |  MLLT6  |  DISEASES
55095  |  SAMD4B  |  DISEASES
10409  |  BASP1  |  DISEASES
10726  |  NUDC  |  DISEASES
3996  |  LLGL1  |  DISEASES
7156  |  TOP3A  |  DISEASES
1555  |  CYP2B6  |  DISEASES
113457  |  TUBA3D  |  DISEASES
286753  |  TUSC5  |  DISEASES
144453  |  BEST3  |  DISEASES
81565  |  NDEL1  |  DISEASES
9075  |  CLDN2  |  DISEASES
2266  |  FGG  |  DISEASES
1641  |  DCX  |  DISEASES
6444  |  SGCD  |  DISEASES
2804  |  GOLGB1  |  DISEASES
859  |  CAV3  |  DISEASES
1508  |  CTSB  |  DISEASES
11255  |  HRH3  |  DISEASES
23394  |  ADNP  |  DISEASES
79648  |  MCPH1  |  DISEASES
1499  |  CTNNB1  |  DISEASES
54820  |  NDE1  |  DISEASES
6122  |  RPL3  |  DISEASES
2879  |  GPX4  |  DISEASES
6050  |  RNH1  |  DISEASES
2202  |  EFEMP1  |  DISEASES
10656  |  KHDRBS3  |  DISEASES
85301  |  COL27A1  |  DISEASES
3476  |  IGBP1  |  DISEASES
1778  |  DYNC1H1  |  DISEASES
487  |  ATP2A1  |  DISEASES
64919  |  BCL11B  |  DISEASES
23607  |  CD2AP  |  DISEASES
79947  |  DHDDS  |  DISEASES
1523  |  CUX1  |  DISEASES
23230  |  VPS13A  |  DISEASES
11169  |  WDHD1  |  DISEASES
5167  |  ENPP1  |  DISEASES
4860  |  PNP  |  DISEASES
916  |  CD3E  |  DISEASES
1756  |  DMD  |  DISEASES
1291  |  COL6A1  |  DISEASES
23038  |  WDTC1  |  DISEASES
27185  |  DISC1  |  DISEASES
4720  |  NDUFS2  |  DISEASES
962  |  CD48  |  DISEASES
8038  |  ADAM12  |  DISEASES
5710  |  PSMD4  |  DISEASES
2018  |  EMX2  |  DISEASES
257  |  ALX3  |  DISEASES
2316  |  FLNA  |  DISEASES
154288  |  KHDC3L  |  DISEASES
60495  |  HPSE2  |  DISEASES
255631  |  COL24A1  |  DISEASES
1557  |  CYP2C19  |  DISEASES
10564  |  ARFGEF2  |  DISEASES
27286  |  SRPX2  |  DISEASES
26190  |  FBXW2  |  DISEASES
7088  |  TLE1  |  DISEASES
765  |  CA6  |  DISEASES
64344  |  HIF3A  |  DISEASES
170302  |  ARX  |  DISEASES
4300  |  MLLT3  |  DISEASES
415  |  ARSE  |  DISEASES
51199  |  NIN  |  DISEASES
7436  |  VLDLR  |  DISEASES
10716  |  TBR1  |  DISEASES
126206  |  NLRP5  |  DISEASES
727857  |  BHLHA9  |  DISEASES
4291  |  MLF1  |  DISEASES
65057  |  ACD  |  DISEASES
7702  |  ZNF143  |  DISEASES
4901  |  NRL  |  DISEASES
825  |  CAPN3  |  DISEASES
5048  |  PAFAH1B1  |  DISEASES
7913  |  DEK  |  DISEASES
81669  |  CCNL2  |  DISEASES
1120  |  CHKB  |  DISEASES
8291  |  DYSF  |  DISEASES
57703  |  CWC22  |  DISEASES
5649  |  RELN  |  DISEASES
3776  |  KCNK2  |  DISEASES
55655  |  NLRP2  |  DISEASES
22930  |  RAB3GAP1  |  DISEASES
23125  |  CAMTA2  |  DISEASES
10243  |  GPHN  |  DISEASES
346171  |  ZFP57  |  DISEASES
1020  |  CDK5  |  DISEASES
4168  |  MCF2  |  DISEASES
5049  |  PAFAH1B2  |  DISEASES
10846  |  PDE10A  |  DISEASES
1622  |  DBI  |  DISEASES
9  |  NAT1  |  DISEASES
3679  |  ITGA7  |  DISEASES
199713  |  NLRP7  |  DISEASES
25859  |  PART1  |  DISEASES
Locus(Waiting for update.)
Disease ID 1648
Disease mds
Integrated Phenotype(Waiting for update.)
Text Mined Phenotype(Waiting for update.)
Disease ID 1648
Disease mds
Manually Symptom(Waiting for update.)
Text Mined Symptom(Waiting for update.)
Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)
All Snps(Total Genotypes:3)
snpId pubmedId geneId geneSymbol diseaseId sourceId sentence score Year geneSymbol_dbSNP CHROMOSOME POS REF ALT
rs3712462262531124410569SLU7umls:C0265219BeFreeWe previously identified missense mutations in the U2AF1 splicing factor affecting codons S34 (S34F and S34Y) or Q157 (Q157R and Q157P) in 11% of the patients with de novo myelodysplastic syndrome (MDS).0.0002714422014U2AF12143094667TC,G
rs3717694272531124410569SLU7umls:C0265219BeFreeWe previously identified missense mutations in the U2AF1 splicing factor affecting codons S34 (S34F and S34Y) or Q157 (Q157R and Q157P) in 11% of the patients with de novo myelodysplastic syndrome (MDS).0.0002714422014U2AF12143104346GA,T
rs371769427253112447307U2AF1umls:C0265219BeFreeThese data suggest that the S34F mutation alters U2AF1 function in the context of specific RNA sequences, leading to aberrant alternative splicing of target genes, some of which may be relevant for MDS pathogenesis.0.0002714422014U2AF12143104346GA,T
GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)
GWASdb Snp Trait(Total Genotypes:0)
(Waiting for update.)
Mapped by lexical matching(Total Items:0)
(Waiting for update.)
Mapped by homologous gene(Total Items:0)
(Waiting for update.)
Chemical(Total Drugs:0)
(Waiting for update.)
FDA approved drug and dosage information(Total Drugs:0)
(Waiting for update.)
FDA labeling changes(Total Drugs:0)
(Waiting for update.)