malignant peripheral nerve sheath tumor |
Disease ID | 913 |
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Disease | malignant peripheral nerve sheath tumor |
Integrated Phenotype | (Waiting for update.) |
Text Mined Phenotype | HPO | Name | Sentences' Count(Total Phenotypes:14) HP:0001067 | Neurofibromas | 24 HP:0009732 | Plexiform neurofibroma | 2 HP:0002664 | Neoplasia | 2 HP:0009588 | Vestibular Schwannoma | 1 HP:0005584 | Renal cell carcinoma | 1 HP:0006770 | Nonpapillary renal cell carcinoma | 1 HP:0000238 | Nonsyndromal hydrocephalus | 1 HP:0100242 | Sarcoma | 1 HP:0100008 | Schwann cell tumour | 1 HP:0012531 | Pain | 1 HP:0012570 | Synovial sarcoma | 1 HP:0002858 | Mengiomia | 1 HP:0001635 | Congestive heart failure | 1 HP:0003005 | Ganglioneuroma | 1 |
Disease ID | 913 |
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Disease | malignant peripheral nerve sheath tumor |
Manually Symptom | UMLS | Name(Total Manually Symptoms:2) |
Text Mined Symptom | (Waiting for update.) |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:17) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs10719 | 23763827 | 29102 | DROSHA | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DROSHA | 5 | 31401340 | A | G |
rs10719 | 23763827 | 27161 | AGO2 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DROSHA | 5 | 31401340 | A | G |
rs10719 | 23763827 | 1655 | DDX5 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DROSHA | 5 | 31401340 | A | G |
rs10719 | 23763827 | 50628 | GEMIN4 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DROSHA | 5 | 31401340 | A | G |
rs113488022 | 24335681 | 673 | BRAF | umls:C0751690 | BeFree | Vemurafenib treatment of BRAF V600E-mutated malignant peripheral nerve sheath tumor. | 0.000814326 | 2014 | BRAF | 7 | 140753336 | A | T,G,C |
rs1991401 | 23763827 | 50628 | GEMIN4 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DDX5;CEP95 | 17 | 64506317 | A | G |
rs1991401 | 23763827 | 29102 | DROSHA | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DDX5;CEP95 | 17 | 64506317 | A | G |
rs1991401 | 23763827 | 1655 | DDX5 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DDX5;CEP95 | 17 | 64506317 | A | G |
rs1991401 | 23763827 | 27161 | AGO2 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | DDX5;CEP95 | 17 | 64506317 | A | G |
rs7005286 | 23763827 | 1655 | DDX5 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | AGO2 | 8 | 140584361 | T | C |
rs7005286 | 23763827 | 29102 | DROSHA | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | AGO2 | 8 | 140584361 | T | C |
rs7005286 | 23763827 | 27161 | AGO2 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | AGO2 | 8 | 140584361 | T | C |
rs7005286 | 23763827 | 50628 | GEMIN4 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | AGO2 | 8 | 140584361 | T | C |
rs7813 | 23763827 | 27161 | AGO2 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | GEMIN4 | 17 | 744946 | G | A |
rs7813 | 23763827 | 1655 | DDX5 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | GEMIN4 | 17 | 744946 | G | A |
rs7813 | 23763827 | 50628 | GEMIN4 | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | GEMIN4 | 17 | 744946 | G | A |
rs7813 | 23763827 | 29102 | DROSHA | umls:C0751690 | BeFree | Four SNPs (DDX5 rs1991401, OR=1.79, 95% CI, 1.34-2.38, P=7.90 × 10(-5); DROSHA rs10719, OR=1.64, 95% CI, 1.23-2.20, P=8.76 × 10(-4); AGO2 rs7005286, OR=0.48, 95% CI, 0.32-0.72, P=3.46 × 10(-4); GEMIN4 rs7813, OR=0.50, 95% CI, 0.34-0.72, P=2.65 × 10(-4)) were significantly associated with MPNST risk. | 0.000271442 | 2013 | GEMIN4 | 17 | 744946 | G | A |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:0) | |
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(Waiting for update.) |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:0) | |
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FDA approved drug and dosage information(Total Drugs:0) | |
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FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |