keratoconus |
Disease ID | 296 |
---|---|
Disease | keratoconus |
Manually Symptom | UMLS | Name(Total Manually Symptoms:43) C2598155 | pain C2363771 | myopic astigmatism C1963186 | ocular surface disease C1962986 | glaucoma C1707516 | corneal sensitivity C1527310 | ametropia C1281914 | corneal allograft rejection C1096274 | corneal thinning C0948285 | corneal striae C0730328 | central serous chorioretinopathy C0700109 | rigidity C0595921 | intraocular pressure C0376288 | amaurosis C0339682 | corneal astigmatism C0339303 | corneal graft rejection C0339273 | corneal amyloidosis C0339084 | floppy eyelid syndrome C0333230 | acute hydrops C0271283 | terrien's marginal degeneration C0175702 | williams-beuren syndrome (wbs) C0155135 | corneal ectasia C0155119 | recurrent corneal erosions C0155118 | corneal degeneration C0155090 | sclerokeratitis C0152194 | irregular astigmatism C0152193 | regular astigmatism C0086437 | joint hypermobility C0035304 | retinal degeneration C0034951 | refractive errors C0034951 | refractive error C0034951 | refraction disorders C0027149 | myxoma C0027092 | myopia C0026267 | mitral valve prolapse C0024473 | magnesium deficiency C0022568 | keratitis C0018920 | cavernous hemangioma C0018621 | hay fever C0013720 | ehlers-danlos syndrome C0009782 | connective tissue disorders C0004106 | astigmatism C0002418 | amblyopia C0000880 | acanthamoeba keratitis |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:20) C0004106 | astigmatism | 10 C0027092 | myopia | 6 C0333230 | acute hydrops | 6 C0152193 | regular astigmatism | 4 C0155135 | corneal ectasia | 4 C1527310 | ametropia | 3 C1707516 | corneal sensitivity | 3 C0152194 | irregular astigmatism | 3 C0034951 | refractive error | 2 C0175702 | williams-beuren syndrome (wbs) | 1 C0017601 | glaucoma | 1 C0034951 | refraction disorders | 1 C1096274 | corneal thinning | 1 C0339682 | corneal astigmatism | 1 C0026837 | rigidity | 1 C0021888 | intraocular pressure | 1 C2363771 | myopic astigmatism | 1 C0034951 | refractive errors | 1 C0026267 | mitral valve prolapse | 1 C0030193 | pain | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
---|
(Waiting for update.) |
All Snps(Total Genotypes:68) | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs11145951 | 26040312 | 64778 | FNDC3B | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | NA | 9 | 136965812 | T | C |
rs11145951 | 26040312 | 5730 | PTGDS | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | NA | 9 | 136965812 | T | C |
rs11145951 | 26040312 | 2308 | FOXO1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | NA | 9 | 136965812 | T | C |
rs11145951 | 26040312 | 1289 | COL5A1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000814326 | 2015 | NA | 9 | 136965812 | T | C |
rs11145951 | 26040312 | 286256 | LCN12 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | NA | 9 | 136965812 | T | C |
rs1324183 | 24265017 | 84708 | LNX1 | umls:C0022578 | BeFree | The SNPs rs1324183 in the MPDZ-NF1B gene and rs9938149 (between BANP and ZNF4659) were associated with KC in this independent cohort, but their association was via a non-corneal curvature route. | 0.000271442 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | NA | 9 | 13557492 | A | C |
rs1324183 | 24265017 | 54971 | BANP | umls:C0022578 | BeFree | The SNPs rs1324183 in the MPDZ-NF1B gene and rs9938149 (between BANP and ZNF4659) were associated with KC in this independent cohort, but their association was via a non-corneal curvature route. | 0.000271442 | 2014 | NA | 9 | 13557492 | A | C |
rs1536482 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 9 | 134548682 | G | A |
rs1536482 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | NA | 9 | 134548682 | G | A |
rs1536482 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | NA | 9 | 134548682 | G | A |
rs1536482 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 9 | 134548682 | G | A |
rs1536482 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | NA | 9 | 134548682 | G | A |
rs191047852 | 22045297 | 23348 | DOCK9 | umls:C0022578 | BeFree | Our results suggest that c.2262A>C (p.Gln754His) mutation in DOCK9 may contribute to the KTCN phenotype in the large KTCN-014 family. | 0.000542884 | 2012 | DOCK9 | 13 | 98885709 | T | G |
rs2071376 | 19043479 | 3552 | IL1A | umls:C0022578 | BeFree | The *C/*A genotype of rs2071376 in IL1A intron 6 was significantly different between the keratoconus patients and control subjects (p=0.034, OR=0.59, 95% CI 0.32<1.11). | 0.003181358 | 2008 | IL1A | 2 | 112777818 | G | T,A |
rs2659546 | 21979947 | 5530 | PPP3CA | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | PPP3CA | 4 | 101116562 | C | T |
rs2721051 | 26040312 | 286256 | LCN12 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | NA | 13 | 40536747 | C | T |
rs2721051 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | NA | 13 | 40536747 | C | T |
rs2721051 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 13 | 40536747 | C | T |
rs2721051 | 26040312 | 5730 | PTGDS | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | NA | 13 | 40536747 | C | T |
rs2721051 | 26040312 | 64778 | FNDC3B | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | NA | 13 | 40536747 | C | T |
rs2721051 | 26040312 | 1289 | COL5A1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000814326 | 2015 | NA | 13 | 40536747 | C | T |
rs2721051 | 23291589 | 2308 | FOXO1 | umls:C0022578 | BeFree | We further showed that 2 CCT-associated loci, FOXO1 and FNDC3B, conferred relatively large risks for keratoconus in 2 cohorts with 874 cases and 6,085 controls (rs2721051 near FOXO1 had odds ratio (OR) = 1.62, 95% confidence interval (CI) = 1.4-1.88, P = 2.7 × 10(-10), and rs4894535 in FNDC3B had OR = 1.47, 95% CI = 1.29-1.68, P = 4.9 × 10(-9)). | 0.120814326 | 2013 | NA | 13 | 40536747 | C | T |
rs2721051 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | NA | 13 | 40536747 | C | T |
rs2721051 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | NA | 13 | 40536747 | C | T |
rs2721051 | 26040312 | 2308 | FOXO1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | NA | 13 | 40536747 | C | T |
rs2721051 | 23291589 | 64778 | FNDC3B | umls:C0022578 | BeFree | We further showed that 2 CCT-associated loci, FOXO1 and FNDC3B, conferred relatively large risks for keratoconus in 2 cohorts with 874 cases and 6,085 controls (rs2721051 near FOXO1 had odds ratio (OR) = 1.62, 95% confidence interval (CI) = 1.4-1.88, P = 2.7 × 10(-10), and rs4894535 in FNDC3B had OR = 1.47, 95% CI = 1.29-1.68, P = 4.9 × 10(-9)). | 0.120814326 | 2013 | NA | 13 | 40536747 | C | T |
rs2721051 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | NA | 13 | 40536747 | C | T |
rs4894535 | 23291589 | 64778 | FNDC3B | umls:C0022578 | BeFree | We further showed that 2 CCT-associated loci, FOXO1 and FNDC3B, conferred relatively large risks for keratoconus in 2 cohorts with 874 cases and 6,085 controls (rs2721051 near FOXO1 had odds ratio (OR) = 1.62, 95% confidence interval (CI) = 1.4-1.88, P = 2.7 × 10(-10), and rs4894535 in FNDC3B had OR = 1.47, 95% CI = 1.29-1.68, P = 4.9 × 10(-9)). | 0.120814326 | 2013 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 26040312 | 2308 | FOXO1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 23291589 | 2308 | FOXO1 | umls:C0022578 | BeFree | We further showed that 2 CCT-associated loci, FOXO1 and FNDC3B, conferred relatively large risks for keratoconus in 2 cohorts with 874 cases and 6,085 controls (rs2721051 near FOXO1 had odds ratio (OR) = 1.62, 95% confidence interval (CI) = 1.4-1.88, P = 2.7 × 10(-10), and rs4894535 in FNDC3B had OR = 1.47, 95% CI = 1.29-1.68, P = 4.9 × 10(-9)). | 0.120814326 | 2013 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 26040312 | 5730 | PTGDS | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 26040312 | 64778 | FNDC3B | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 26040312 | 1289 | COL5A1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000814326 | 2015 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | FNDC3B | 3 | 172277815 | C | T |
rs4894535 | 26040312 | 286256 | LCN12 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | FNDC3B | 3 | 172277815 | C | T |
rs4954218 | 21979947 | 22930 | RAB3GAP1 | umls:C0022578 | BeFree | These findings suggest SNP rs4954218, located near the RAB3GAP1 gene, previously reported to be associated with corneal malformation, is a potential susceptibility locus for keratoconus. | 0.000814326 | 2012 | MAP3K19 | 2 | 135045855 | G | T |
rs4954218 | 21979947 | 80122 | MAP3K19 | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | MAP3K19 | 2 | 135045855 | G | T |
rs62637014 | 11548141 | 23746 | AIPL1 | umls:C0022578 | BeFree | Leber's congenital amaurosis with anterior keratoconus in Pakistani families is caused by the Trp278X mutation in the AIPL1 gene on 17p. | 0.000814326 | 2001 | AIPL1 | 17 | 6425781 | C | T |
rs6430585 | 21979947 | 23190 | UBXN4 | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | UBXN4 | 2 | 135749357 | A | C |
rs6442925 | 21979947 | 100126791 | EGOT | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | BHLHE40-AS1 | 3 | 4972191 | T | C |
rs7044529 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 26040312 | 5730 | PTGDS | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 26040312 | 64778 | FNDC3B | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 26040312 | 286256 | LCN12 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000271442 | 2015 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 26040312 | 2308 | FOXO1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.120814326 | 2015 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | COL5A1 | 9 | 134676205 | C | T |
rs7044529 | 26040312 | 1289 | COL5A1 | umls:C0022578 | BeFree | We replicated the same trend of MAF alteration of the association between the SNPs rs4894535 (FNDC3B, chr3: 171995605), rs7044529 (COL5A1, chr9: 137568051), rs11145951 (LCN12-PTGDS, chr9: 139860264) and rs2721051 (FOXO1, chr13: 41110884) and KC-risk as reported by a recently published GWAS. | 0.000814326 | 2015 | COL5A1 | 9 | 134676205 | C | T |
rs8111998 | 21979947 | 148198 | ZNF98 | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | NA | 19 | 22558873 | C | T |
rs8111998 | 21979947 | 57615 | ZNF492 | umls:C0022578 | GAD | [A genome-wide association study identifies a potential novel gene locus for keratoconus, one of the commonest causes for corneal transplantation in developed countries.] | 0.002367032 | 2012 | NA | 19 | 22558873 | C | T |
rs9938149 | 24265017 | 84627 | ZNF469 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.001085767 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 6256 | RXRA | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000271442 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 64778 | FNDC3B | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 1289 | COL5A1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.000814326 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 54971 | BANP | umls:C0022578 | BeFree | The SNPs rs1324183 in the MPDZ-NF1B gene and rs9938149 (between BANP and ZNF4659) were associated with KC in this independent cohort, but their association was via a non-corneal curvature route. | 0.000271442 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 84708 | LNX1 | umls:C0022578 | BeFree | The SNPs rs1324183 in the MPDZ-NF1B gene and rs9938149 (between BANP and ZNF4659) were associated with KC in this independent cohort, but their association was via a non-corneal curvature route. | 0.000271442 | 2014 | ZNF469 | 16 | 88298034 | C | A |
rs9938149 | 24265017 | 2308 | FOXO1 | umls:C0022578 | BeFree | The following six single-nucleotide polymorphisms (SNPs) that showed a statistically significant association with KC in a recent GWAS study were selected for genotyping in our cohort: rs4894535 (FNDC3B), rs1324183 (MPDZ-NF1B), rs1536482 (RXRA-COL5A1), rs7044529 (COL5A), rs2721051 (FOXO1), and rs9938149 (BANP-ZNF469). | 0.120814326 | 2014 | ZNF469 | 16 | 88298034 | C | A |
GWASdb Annotation(Total Genotypes:0) | |
---|---|
(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:0) | |
---|---|
(Waiting for update.) |
Mapped by lexical matching(Total Items:0) |
---|
(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
---|
(Waiting for update.) |
Chemical(Total Drugs:0) | |
---|---|
(Waiting for update.) |
FDA approved drug and dosage information(Total Drugs:0) | |
---|---|
(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
---|---|
(Waiting for update.) |