GWASdb Snp Trait(Total Genotypes:40) |
---|
CHR |
POS |
SNPID |
REF |
ALT |
ORI_SNPID |
PMID |
P_VALUE |
P_VALUE_TEXT |
OR/BETA |
CI95_TEXT |
GWAS_INITIAL_SAMPLE_SIZE |
SUB_POPULATION |
SUPER_POPULATION |
GWAS_TRAIT |
HPO_ID |
HPO_TERM |
DO_ID |
DO_TERM |
MESH_ID |
MESH_TERM |
EFO_ID |
EFO_TERM |
DOLITE_TERM |
RISK_ALLELE |
PUBLICATION_TYPE |
AA |
GENE_SYMBOL |
TYPE |
REFGENE |
1 | 196651832 | rs3766404 | T | C | rs3766404 | 21399633 | 1.80E-05 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
1 | 196686918 | rs6677604 | G | A | rs6677604 | 21399633 | 3.00E-10 | NA | 1.47 | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
1 | 207104813 | rs291100 | T | C | rs291100 | 12740691 | 6.50E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | C |
1 | 207106478 | rs291102 | G | A | rs291102 | 12740691 | 3.00E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | C |
1 | 207109425 | rs503746 | A | G | rs503746 | 12740691 | 3.00E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | T |
1 | 207110936 | rs291096 | T | C | rs291096 | 12740691 | 3.00E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | G |
1 | 207118422 | rs12136238 | G | A | rs12136238 | 12740691 | 5.50E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | G |
1 | 207119853 | rs2275529 | C | A | rs2275529 | 12740691 | 5.50E-04 | IgA nephropathy | NA | NA | 389 Japanese IgAN patients; 465 Japanese controls | Japanese(854) | ALL(854) | ASN(854) | ALL(854) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | Comparative Study | G |
2 | 111599706 | rs4849121 | G | A | rs4849121 | 22197929 | 4.00E-07 | NA | 1.15 | [1.09-1.22] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs4849121-G | Research Support, Non-U.S. Gov't | A | ACOXL |
4 | 40303633 | rs6832151 | G | T | rs6832151 | 22197929 | 1.85E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | T | NA |
4 | 77763998 | rs10518159 | C | T | rs10518159 | 22197929 | 2.23E-05 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | NA |
6 | 29941943 | rs2523946 | C | T | rs2523946 | 22197929 | 2.00E-11 | NA | 1.21 | [1.15-1.28] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs2523946-C | Research Support, Non-U.S. Gov't | A | NA |
6 | 31274380 | rs9264942 | T | C | rs9264942 | 22197929 | 8.24E-08 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | NA |
6 | 32218843 | rs3115573 | A | G | rs3115573 | 20595679 | 1.00E-09 | NA | 1.62 | [1.39-1.90] | 533 family members; 244 European cases; 4,980 European controls | NOPOP(533) | European(5224) | ALL(5757) | NOPOP(533) | EUR(5224) | ALL(5757) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't |
6 | 32577380 | rs660895 | A | G | rs660895 | 22197929 | 4.00E-20 | NA | 1.34 | [1.26-1.42] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs660895-G | Research Support, Non-U.S. Gov't | A | NA |
6 | 32659878 | rs9275224 | A | G | rs9275224 | 21399633 | 2.60E-10 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G,A |
6 | 32670308 | rs2856717 | A | G | rs2856717 | 21399633 | 3.30E-08 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
6 | 32670576 | rs9275424 | A | G | rs9275424 | 21399633 | 1.70E-08 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
6 | 32671248 | rs1794275 | G | A | rs1794275 | 22197929 | 3.00E-13 | NA | 1.3 | [1.21-1.39] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs1794275-A | Research Support, Non-U.S. Gov't | C | NA |
6 | 32681631 | rs9275596 | C | T | rs9275596 | 21399633 | 2.00E-26 | NA | 1.59 | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T,C |
6 | 32809848 | rs9357155 | G | A | rs9357155 | 21399633 | 2.00E-12 | NA | 1.41 | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | G |
6 | 32811629 | rs2071543 | G | T | rs2071543 | 21399633 | 7.20E-06 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | C |
6 | 33055538 | rs9277554 | C | T | rs9277554 | 22197929 | 1.46E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | HLA-DPB1 |
6 | 33086448 | rs1883414 | G | A | rs1883414 | 21399633 | 5.00E-09 | NA | 1.28 | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
6 | 33097614 | rs3129269 | C | A | rs3129269 | 21399633 | 1.30E-05 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | T |
7 | 33613560 | rs4590341 | C | A | rs4590341 | 22197929 | 1.17E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | A | BBS9 |
8 | 6822785 | rs2738048 | A | G | rs2738048 | 22197929 | 3.00E-14 | NA | 1.27 | [1.19-1.35] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs2738048-A | Research Support, Non-U.S. Gov't | T | NA |
8 | 30185572 | rs12541729 | T | C | rs12541729 | 22197929 | 5.38E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | NA |
11 | 44085687 | rs7127924 | C | A | rs7127924 | 22197929 | 1.24E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | NA |
11 | 68705820 | rs2275996 | G | A | rs2275996 | 15599641 | 1.00E-05 | IgA nephropathy | NA | NA | 465 Japanese cases; 634 Japanese controls | Japanese(1099) | ALL(1099) | ASN(1099) | ALL(1099) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | G | IGHMBP2 |
11 | 113864109 | rs897685 | C | T | rs897685 | 22197929 | 5.42E-05 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | A | NA |
12 | 13338113 | rs4485187 | A | G | rs4485187 | 22197929 | 3.09E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | G | NA |
12 | 131062900 | rs8181764 | C | A | rs8181764 | 22197929 | 6.84E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | A | NA |
14 | 70047167 | rs6573893 | C | T | rs6573893 | 22197929 | 3.71E-04 | NA | NA | NA | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | C | NA |
16 | 31347748 | rs3925075 | A | G | rs3925075 | 22197929 | 5.00E-06 | NA | 1.15 | [1.09-1.23] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | NA | Research Support, Non-U.S. Gov't | T | NA |
17 | 7462969 | rs3803800 | A | G | rs3803800 | 22197929 | 9.00E-11 | NA | 1.21 | [1.14-1.28] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs3803800-A | Research Support, Non-U.S. Gov't | A | TNFSF13 |
17 | 7491177 | rs4227 | G | T | rs4227 | 22197929 | 4.00E-10 | NA | 1.23 | [1.16-1.32] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs4227-G | Research Support, Non-U.S. Gov't | T | MPDU1 |
22 | 30423460 | rs12537 | C | T | rs12537 | 22197929 | 1.00E-11 | NA | 1.28 | [1.19-1.39] | 1,434 Chinese ancestry cases; 4,270 Chinese ancestry controls. | Chinese(5704) | ALL(5704) | ASN(5704) | ALL(5704) | IgA nephropathy | HPOID:0000794 | IgA deposition in the glomerulus | DOID:2986 | IgA glomerulonephritis | D005922 | Glomerulonephritis, IGA | EFOID:0004194 | iga glomerulonephritis | IGA glomerulonephritis | rs12537-C | Research Support, Non-U.S. Gov't | T | MTMR3 |
22 | 30494371 | rs2412971 | G | A | rs2412971 | 21399633 | 2.00E-09 | NA | 1.25 | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |
22 | 30529631 | rs2412973 | C | A | rs2412973 | 21399633 | 1.90E-06 | NA | NA | NA | 1,194 Chinese ancestry cases; 902 Chinese ancestry controls | Chinese(2096) | ALL(2096) | ASN(2096) | ALL(2096) | Nephropathy | HPOID:0000112 | Nephropathy | DOID:2986 | IgA glomerulonephritis | D007674 | Kidney Diseases | EFOID:0003086 | kidney disease | IGA glomerulonephritis | NA | Research Support, N.I.H., Extramural | Research Support, Non-U.S. Gov't | A |