goiter |
Disease ID | 680 |
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Disease | goiter |
Manually Symptom | (Waiting for update.) |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:12) C0020550 | hyperthyroidism | 16 C0020676 | hypothyroidism | 16 C0007115 | thyroid cancer | 5 C0342199 | iodine deficiency | 4 C0001883 | airway obstruction | 3 C0015300 | exophthalmos | 3 C0740852 | upper airway obstruction | 2 C0264490 | acute respiratory failure | 1 C0085619 | orthopnea | 1 C0011053 | deafness | 1 C0221002 | primary hyperparathyroidism | 1 C0003873 | rheumatoid arthritis | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:9) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs10917468 | 21565293 | 832 | CAPZB | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | LOC105376817;LOC105376819 | 1 | 19516860 | T | C |
rs12045440 | 21565293 | 832 | CAPZB | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | CAPZB;LOC105378613 | 1 | 19439024 | T | G |
rs12138950 | 21565293 | 832 | CAPZB | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | LOC105376817;LOC105376818;LOC105376819 | 1 | 19512621 | A | C |
rs140117073 | 23535966 | 80273 | GRPEL1 | umls:C0018021 | BeFree | In one of the families, we found two rare heterozygous missense variants, p.V56M in RGS12 and p.G37D in GRPEL1, which segregate with goiter and are both located within the same haplotype on 4p16. | 0.000271442 | 2014 | GRPEL1;LOC105374368 | 4 | 7064176 | C | A,G,T |
rs17767419 | 21565293 | 4094 | MAF | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | LOC105371356 | 16 | 79710651 | C | T |
rs28939086 | 15531480 | 5172 | SLC26A4 | umls:C0018021 | BeFree | Intrafamilial variability of the deafness and goiter phenotype in Pendred syndrome caused by a T416P mutation in the SLC26A4 gene. | 0.132334436 | 2004 | SLC26A4 | 7 | 107690220 | A | C |
rs3813579 | 21565293 | 4094 | MAF | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | LOC105371356 | 16 | 79715379 | G | A |
rs4338740 | 21565293 | 2252 | FGF7 | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | FGF7;FAM227B | 15 | 49443100 | T | C |
rs4338740 | 21565293 | 196951 | FAM227B | umls:C0018021 | GAD | [Genome-wide association study identifies four genetic loci associated with thyroid volume and goiter risk.] | 0.002367032 | 2011 | FGF7;FAM227B | 15 | 49443100 | T | C |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:9) | |||||||||||||||||||||||||||||
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CHR | POS | SNPID | REF | ALT | ORI_SNPID | PMID | P_VALUE | P_VALUE_TEXT | OR/BETA | CI95_TEXT | GWAS_INITIAL_SAMPLE_SIZE | SUB_POPULATION | SUPER_POPULATION | GWAS_TRAIT | HPO_ID | HPO_TERM | DO_ID | DO_TERM | MESH_ID | MESH_TERM | EFO_ID | EFO_TERM | DOLITE_TERM | RISK_ALLELE | PUBLICATION_TYPE | AA | GENE_SYMBOL | TYPE | REFGENE |
1 | 19765518 | rs12045440 | T | G | rs12045440 | 21565293 | 2.00E-11 | goiter | 1.38 | [1.26-1.51] | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs12045440-T | Research Support, Non-U.S. Gov't | T | CAPZB |
1 | 19765518 | rs12045440 | T | G | rs12045440 | 21565293 | 3.00E-14 | thyroid volume | 0.07 | [0.05-0.09] unit increase | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs12045440-T | Research Support, Non-U.S. Gov't | T | CAPZB |
1 | 19839115 | rs12138950 | A | C | rs12138950 | 21565293 | 3.00E-18 | thyroid volume | 0.1 | [0.08-0.12] unit decrease | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs12138950-A | Research Support, Non-U.S. Gov't | C,A | NA |
1 | 19839115 | rs568931048 | A | AC | rs12138950 | 21565293 | 3.00E-18 | thyroid volume | 0.1 | [0.08-0.12] unit decrease | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs12138950-A | Research Support, Non-U.S. Gov't | C,A | NA |
1 | 19843354 | rs10917468 | T | C | rs10917468 | 21565293 | 1.00E-14 | goiter | 1.52 | [1.37-1.69] | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs10917468-C | Research Support, Non-U.S. Gov't | C | NA |
15 | 49735297 | rs4338740 | T | C | rs4338740 | 21565293 | 1.00E-12 | thyroid volume | 0.07 | [0.05-0.09] unit decrease | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs4338740-T | Research Support, Non-U.S. Gov't | C | FGF7 |
15 | 49735297 | rs4338740 | T | C | rs4338740 | 21565293 | 3.00E-13 | goiter | 1.45 | [1.32-1.59] | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs4338740-C | Research Support, Non-U.S. Gov't | C | FGF7 |
16 | 79744548 | rs17767419 | C | T | rs17767419 | 21565293 | 9.00E-15 | thyroid volume | 0.07 | [0.05-0.09] unit increase | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs17767419-T | Research Support, Non-U.S. Gov't | C | NA |
16 | 79749276 | rs3813579 | G | A | rs3813579 | 21565293 | 4.00E-10 | goiter | 1.32 | [1.21-1.44] | 3,620 European ancestry individuals | European(3620) | ALL(3620) | EUR(3620) | ALL(3620) | Thyroid volume | HPOID:0011772 | Abnormality of thyroid morphology | DOID:12176 | goiter | D013959 | Thyroid Diseases | EFOID:0004865 | thryoid volume | Thyroid gland disease | rs3813579-A | Research Support, Non-U.S. Gov't | G | NA |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:0) |
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(Waiting for update.) |
Chemical(Total Drugs:3) | |||||||||
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CUI | ChemicalName | ChemicalID | CasRN | DiseaseName | DiseaseID | DirectEvidence | PubMedIDs | ||
C0018021 | indomethacin | D007213 | 53-86-1 | goiter | MESH:D006042 | therapeutic | 22387750 | ||
C0018021 | propylthiouracil | D011441 | 51-52-5 | goiter | MESH:D006042 | marker/mechanism | 10911406 | ||
C0018021 | propylthiouracil | D011441 | 51-52-5 | goiter | MESH:D006042 | therapeutic | 1110434 |
FDA approved drug and dosage information(Total Drugs:0) | |
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(Waiting for update.) |
FDA labeling changes(Total Drugs:0) | |
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(Waiting for update.) |