fabry disease |
Disease ID | 69 |
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Disease | fabry disease |
Integrated Phenotype | HPO | Name(Total Integrated Phenotypes:65) HP:0011675 | Arrhythmia HP:0000407 | Sensorineural hearing impairment HP:0002823 | Abnormality of the femur HP:0002829 | Arthralgia HP:0003077 | Hyperlipidemia HP:0002097 | Emphysema HP:0000739 | Anxiety HP:0001635 | Congestive heart failure HP:0001678 | Atrioventricular block HP:0000823 | Delayed puberty HP:0100585 | Telangiectasia of the skin HP:0100820 | Glomerulopathy HP:0000708 | Behavioral abnormality HP:0001637 | Abnormality of the myocardium HP:0002321 | Vertigo HP:0003326 | Myalgia HP:0001945 | Fever HP:0004322 | Short stature HP:0002571 | Achalasia HP:0000822 | Hypertension HP:0000091 | Abnormality of the renal tubule HP:0000873 | Diabetes insipidus HP:0000524 | Conjunctival telangiectasia HP:0001250 | Seizures HP:0100543 | Cognitive impairment HP:0000083 | Renal insufficiency HP:0002093 | Respiratory insufficiency HP:0007957 | Corneal opacity HP:0000365 | Hearing impairment HP:0000280 | Coarse facial features HP:0011710 | Bundle branch block HP:0002376 | Developmental regression HP:0000962 | Hyperkeratosis HP:0002094 | Dyspnea HP:0000093 | Proteinuria HP:0000100 | Nephrotic syndrome HP:0000716 | Depression HP:0003119 | Abnormality of lipid metabolism HP:0012378 | Fatigue HP:0000790 | Hematuria HP:0001369 | Arthritis HP:0002024 | Malabsorption HP:0001004 | Lymphedema HP:0002017 | Nausea and vomiting HP:0004306 | Abnormality of the endocardium HP:0000518 | Cataract HP:0001131 | Corneal dystrophy HP:0002326 | Transient ischemic attack HP:0001903 | Anemia HP:0001653 | Mitral regurgitation HP:0006510 | Chronic obstructive pulmonary disease HP:0000112 | Nephropathy HP:0000179 | Thick lower lip vermilion HP:0001646 | Abnormality of the aortic valve HP:0004349 | Reduced bone mineral density HP:0000648 | Optic atrophy HP:0001681 | Angina pectoris HP:0000966 | Hypohidrosis HP:0100579 | Mucosal telangiectasiae HP:0002039 | Anorexia HP:0001482 | Subcutaneous nodule HP:0001014 | Angiokeratoma HP:0001639 | Hypertrophic cardiomyopathy HP:0002027 | Abdominal pain HP:0001712 | Left ventricular hypertrophy |
Text Mined Phenotype | HPO | Name | Sentences' Count(Total Phenotypes:38) HP:0001297 | Cerebral vascular events | 8 HP:0001712 | Left ventricular hypertrophy | 6 HP:0001714 | Ventricular hypertrophy | 6 HP:0001014 | Angiokeratoma | 5 HP:0001639 | Hypertrophic cardiomyopathy | 3 HP:0000083 | Renal insufficiency | 3 HP:0012531 | Pain | 3 HP:0000112 | Nephropathy | 2 HP:0003774 | End-stage renal failure | 2 HP:0001638 | Cardiomyopathy | 2 HP:0200023 | Priapism | 2 HP:0001945 | Fever | 2 HP:0009830 | Peripheral neuritis | 2 HP:0002140 | Ischemic stroke | 2 HP:0000093 | Proteinuria | 2 HP:0011034 | Amyloid disease | 2 HP:0001649 | Tachycardia | 1 HP:0002076 | Migraine headaches | 1 HP:0030682 | Left ventricular noncompaction | 1 HP:0002665 | Lymphoma | 1 HP:0002077 | Migraine with aura | 1 HP:0001685 | Myocardial fibrosis | 1 HP:0001907 | Thromboembolic disease | 1 HP:0200034 | Papule | 1 HP:0002189 | Excessive daytime sleepiness | 1 HP:0009763 | Limb pain | 1 HP:0002180 | Neurodegeneration | 1 HP:0004756 | Ventricular tachycardia | 1 HP:0003756 | Skeletal myopathy | 1 HP:0000716 | Depression | 1 HP:0001730 | Progressive hearing impairment | 1 HP:0003198 | Myopathic changes | 1 HP:0000822 | Hypertension | 1 HP:0011458 | Abdominal symptom | 1 HP:0030880 | Raynaud phenomenon | 1 HP:0001262 | Somnolence | 1 HP:0012577 | Thin glomerular basement membrane | 1 HP:0001662 | Bradycardia | 1 |
Disease ID | 69 |
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Disease | fabry disease |
Manually Symptom | UMLS | Name(Total Manually Symptoms:56) C2712340 | dyspnoea C2598155 | pain C2108077 | atrioventricular block C2029884 | hearing loss C1963154 | renal failure C1962972 | proteinuria C1868885 | uncontrolled hypertension C1706559 | cornea verticillata C1393529 | vascular complications C1384666 | hearing impairment C1318520 | necrotizing vasculitis C0948600 | organ failure C0948008 | ischaemic stroke C0752303 | urological manifestations C0752303 | urological manifestation C0748159 | pulmonary involvement C0598608 | hyperhomocysteinaemia C0497327 | dementia C0442874 | neuropathy C0426576 | gastrointestinal symptoms C0423716 | neuropathic pain C0422833 | ent symptoms C0376293 | stigmata C0343190 | cutaneous polyarteritis nodosa C0340425 | hypertrophic cardiomyopathy C0333559 | lacunar stroke C0260662 | hearing disorders C0235031 | neurological symptoms C0234230 | burning pain C0234221 | acroparaesthesia C0234131 | motor dysfunction C0232306 | left ventricular hypertrophy C0221505 | cerebral lesions C0155765 | microangiopathy C0151744 | myocardial ischemia C0042373 | vascular disease C0040053 | thrombosis C0038454 | stroke C0037285 | skin manifestations C0035258 | restless legs syndrome C0033975 | psychosis C0033117 | priapism C0031117 | peripheral neuropathy C0029132 | optic neuropathy C0025289 | meningitis C0024236 | lymphedema C0023223 | leg ulcers C0022661 | end-stage renal disease C0022658 | renal disease C0022658 | nephropathy C0022408 | arthropathy C0018784 | sensorineural hearing loss C0010036 | corneal dystrophy C0004153 | atherosclerosis C0002985 | angiokeratomas C0002985 | angiokeratoma |
Text Mined Symptom | UMLS | Name | Sentences' Count(Total Symptoms:21) C0038454 | stroke | 8 C0442874 | neuropathy | 6 C0149721 | left ventricular hypertrophy | 6 C0022658 | renal disease | 4 C0035078 | renal failure | 3 C0030193 | pain | 3 C0423716 | neuropathic pain | 3 C0002985 | angiokeratoma | 3 C0007194 | hypertrophic cardiomyopathy | 3 C0022658 | nephropathy | 2 C0033117 | priapism | 2 C0042373 | vascular disease | 2 C0002985 | angiokeratomas | 2 C0033687 | proteinuria | 2 C0031117 | peripheral neuropathy | 2 C0022661 | end-stage renal disease | 1 C1706559 | cornea verticillata | 1 C1393529 | vascular complications | 1 C0948600 | organ failure | 1 C1384666 | hearing loss | 1 C0221505 | cerebral lesions | 1 |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:33) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs104894828 | 20961863 | 2717 | GLA | umls:C0002986 | BeFree | A transgenic mouse expressing the human α-Gal A R301Q mutant in an α-Gal A-knockout background (TgM/KO) should be useful for studying active-site-specific chaperone (ASSC) therapy for Fabry disease. | 0.664863403 | 2011 | GLA;RPL36A-HNRNPH2 | X | 101398467 | C | T,A |
rs104894833 | 22305854 | 2717 | GLA | umls:C0002986 | BeFree | Recently, male subjects harboring the c.196G>C nucleotide change which leads to the E66Q enzyme having low α-galactosidase A (GLA) activity have been identified at an unexpectedly high frequency on Japanese and Korean screening for Fabry disease involving dry blood spots and plasma/serum samples. | 0.664863403 | 2012 | GLA;RPL36A-HNRNPH2 | X | 101403984 | C | G |
rs104894833 | 23724928 | 2717 | GLA | umls:C0002986 | BeFree | All IS patients with p.E66Q mutation had substantial residual α-Gal A activity, in contrast to patients with classic-type Fabry disease. | 0.664863403 | 2013 | GLA;RPL36A-HNRNPH2 | X | 101403984 | C | G |
rs104894833 | 22695894 | 2717 | GLA | umls:C0002986 | BeFree | On the other hand, unexpectedly high frequencies of male subjects having the c.196G>C nucleotide change (p.E66Q) showing low α-GLA activity have been reported on Japanese and Korean screening for Fabry disease. | 0.664863403 | 2012 | GLA;RPL36A-HNRNPH2 | X | 101403984 | C | G |
rs104894833 | 22874111 | 2717 | GLA | umls:C0002986 | BeFree | The frequency of Fabry disease with the E66Q variant in the α-galactosidase A gene in Japanese dialysis patients: a case report and a literature review. | 0.664863403 | 2012 | GLA;RPL36A-HNRNPH2 | X | 101403984 | C | G |
rs104894833 | 20505683 | 2717 | GLA | umls:C0002986 | BeFree | Mutations of the GLA gene in Korean patients with Fabry disease and frequency of the E66Q allele as a functional variant in Korean newborns. | 0.664863403 | 2010 | GLA;RPL36A-HNRNPH2 | X | 101403984 | C | G |
rs104894848 | 10845698 | 2717 | GLA | umls:C0002986 | BeFree | Role of Ser-65 in the activity of alpha-galactosidase A: characterization of a point mutation (S65T) detected in a patient with Fabry disease. | 0.664863403 | 2000 | GLA;HNRNPH2;RPL36A-HNRNPH2 | X | 101407710 | C | G |
rs104894848 | 9554750 | 2717 | GLA | umls:C0002986 | BeFree | Identification of a novel point mutation (S65T) in alpha-galactosidase A gene in Chinese patients with Fabry disease. Mutations in brief no. 169. Online. | 0.664863403 | 1998 | GLA;HNRNPH2;RPL36A-HNRNPH2 | X | 101407710 | C | G |
rs28935191 | 19621417 | 2717 | GLA | umls:C0002986 | UNIPROT | Newborn screening for Fabry disease in Taiwan reveals a high incidence of the later-onset GLA mutation c.936+919G>A (IVS4+919G>A). | 0.664863403 | 2009 | NA | NA | NA | NA | NA |
rs28935192 | 7599642 | 2717 | GLA | umls:C0002986 | UNIPROT | Two novel mutations (L32P) and (G85N) among five different missense mutations in six Danish families with Fabry's disease. | 0.664863403 | 1995 | NA | NA | NA | NA | NA |
rs28935193 | 7504405 | 2717 | GLA | umls:C0002986 | UNIPROT | Nature and frequency of mutations in the alpha-galactosidase A gene that cause Fabry disease. | 0.664863403 | 1993 | NA | NA | NA | NA | NA |
rs28935194 | NA | 2717 | GLA | umls:C0002986 | UNIPROT | NA | 0.664863403 | NA | NA | NA | NA | NA | NA |
rs28935195 | 11316246 | 2717 | GLA | umls:C0002986 | BeFree | A missense mutation, A156T, in the alpha-galactosidase A gene causes typical Fabry disease. | 0.664863403 | 2001 | GLA;RPL36A-HNRNPH2 | X | 101401713 | C | T |
rs28935195 | 7599642 | 2717 | GLA | umls:C0002986 | UNIPROT | Two novel mutations (L32P) and (G85N) among five different missense mutations in six Danish families with Fabry's disease. | 0.664863403 | 1995 | GLA;RPL36A-HNRNPH2 | X | 101401713 | C | T |
rs28935196 | 7504405 | 2717 | GLA | umls:C0002986 | UNIPROT | Nature and frequency of mutations in the alpha-galactosidase A gene that cause Fabry disease. | 0.664863403 | 1993 | GLA;RPL36A-HNRNPH2 | X | 101401695 | A | G |
rs28935197 | 15712228 | 2717 | GLA | umls:C0002986 | UNIPROT | Detection of alpha-galactosidase a mutations causing Fabry disease by denaturing high performance liquid chromatography. | 0.664863403 | 2005 | GLA;RPL36A-HNRNPH2 | X | 101398942 | T | C |
rs28935198 | 10916280 | 2717 | GLA | umls:C0002986 | UNIPROT | Fabry disease: twenty-two novel mutations in the alpha-galactosidase A gene and genotype/phenotype correlations in severely and mildly affected hemizygotes and heterozygotes. | 0.664863403 | 2000 | NA | NA | NA | NA | NA |
rs28935485 | 10838196 | 2717 | GLA | umls:C0002986 | UNIPROT | Characterization of two alpha-galactosidase mutants (Q279E and R301Q) found in an atypical variant of Fabry disease. | 0.664863403 | 2000 | GLA;RPL36A-HNRNPH2 | X | 101398534 | G | C |
rs28935486 | 15712228 | 2717 | GLA | umls:C0002986 | UNIPROT | Detection of alpha-galactosidase a mutations causing Fabry disease by denaturing high performance liquid chromatography. | 0.664863403 | 2005 | GLA;RPL36A-HNRNPH2 | X | 101398795 | T | A |
rs28935487 | 7504405 | 2717 | GLA | umls:C0002986 | UNIPROT | Nature and frequency of mutations in the alpha-galactosidase A gene that cause Fabry disease. | 0.664863403 | 1993 | GLA;RPL36A-HNRNPH2 | X | 101398789 | T | A |
rs28935488 | 8395937 | 2717 | GLA | umls:C0002986 | UNIPROT | Mutation analysis in patients with the typical form of Anderson-Fabry disease. | 0.664863403 | 1993 | GLA;RPL36A-HNRNPH2 | X | 101398563 | A | G |
rs28935489 | 7504405 | 2717 | GLA | umls:C0002986 | UNIPROT | Nature and frequency of mutations in the alpha-galactosidase A gene that cause Fabry disease. | 0.664863403 | 1993 | GLA;RPL36A-HNRNPH2 | X | 101398479 | G | A |
rs28935490 | 11668641 | 2717 | GLA | umls:C0002986 | UNIPROT | Fabry disease: 20 novel GLA mutations in 35 families. | 0.664863403 | 2001 | GLA;RPL36A-HNRNPH2 | X | 101398432 | C | A |
rs28935490 | 14680977 | 2717 | GLA | umls:C0002986 | BeFree | Fabry disease: D313Y is an alpha-galactosidase A sequence variant that causes pseudodeficient activity in plasma. | 0.664863403 | 2003 | GLA;RPL36A-HNRNPH2 | X | 101398432 | C | A |
rs28935491 | 10208848 | 2717 | GLA | umls:C0002986 | UNIPROT | Fabry disease: identification of novel alpha-galactosidase A mutations and molecular carrier detection by use of fluorescent chemical cleavage of mismatches. | 0.664863403 | 1999 | GLA;RPL36A-HNRNPH2 | X | 101398390 | G | T |
rs28935492 | 15712228 | 2717 | GLA | umls:C0002986 | UNIPROT | Detection of alpha-galactosidase a mutations causing Fabry disease by denaturing high performance liquid chromatography. | 0.664863403 | 2005 | GLA;RPL36A-HNRNPH2 | X | 101398386 | C | G |
rs28935493 | 11531972 | 2717 | GLA | umls:C0002986 | BeFree | The diagnosis of FD was confirmed by demonstration of a decreased alpha-galactosidase A activity, and the patient was shown to be hemizygote for a missense mutation (R342Q) in the alpha-galactosidase A gene (GLA). | 0.664863403 | 2001 | GLA;RPL36A-HNRNPH2 | X | 101398074 | C | T |
rs28935493 | NA | 2717 | GLA | umls:C0002986 | UNIPROT | NA | 0.664863403 | NA | GLA;RPL36A-HNRNPH2 | X | 101398074 | C | T |
rs28935494 | 8395937 | 2717 | GLA | umls:C0002986 | UNIPROT | Mutation analysis in patients with the typical form of Anderson-Fabry disease. | 0.664863403 | 1993 | GLA;RPL36A-HNRNPH2 | X | 101398018 | C | T,G |
rs28935495 | 15162124 | 2717 | GLA | umls:C0002986 | UNIPROT | Following the diagnosis of Fabry disease in a 45-year-old male, in 31 family members alpha-galactosidase A (alpha-Gal) activity in leucocytes was measured and mutation analysis of the alpha-Gal gene was performed. | 0.664863403 | 2004 | GLA;RPL36A-HNRNPH2 | X | 101398554 | T | C |
rs28936082 | 10208848 | 2717 | GLA | umls:C0002986 | UNIPROT | Fabry disease: identification of novel alpha-galactosidase A mutations and molecular carrier detection by use of fluorescent chemical cleavage of mismatches. | 0.664863403 | 1999 | NA | NA | NA | NA | NA |
rs662 | 22796398 | 5444 | PON1 | umls:C0002986 | BeFree | The objective of the current study was to investigate the PON1 polymorphisms Gln192Arg and Leu55Met in FD patients and correlate them with clinical symptoms. | 0.000542884 | 2012 | PON1 | 7 | 95308134 | T | C |
rs854560 | 22796398 | 5444 | PON1 | umls:C0002986 | BeFree | The objective of the current study was to investigate the PON1 polymorphisms Gln192Arg and Leu55Met in FD patients and correlate them with clinical symptoms. | 0.000542884 | 2012 | PON1 | 7 | 95316772 | A | C,G,N,T |
GWASdb Annotation(Total Genotypes:0) | |
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Mapped by lexical matching(Total Items:0) |
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Mapped by homologous gene(Total Items:0) |
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