PedAM

Pediatric Disease Annotations & Medicines


	diabetes mellitus, insulin-dependent

Disease ID	953
Disease	diabetes mellitus, insulin-dependent
Synonym	-- diabetes type 1 brittle diabetes mellitus diabetes mellitus (juvenile onset) diabetes mellitus - juvenile diabetes mellitus insulin dependent diabetes mellitus type 01 diabetes mellitus type 1 diabetes mellitus type 1 (disorder) diabetes mellitus type i diabetes mellitus, brittle diabetes mellitus, insulin dependent diabetes mellitus, insulin-dependent, 1 diabetes mellitus, juvenile onset diabetes mellitus, juvenile-onset diabetes mellitus, ketosis prone diabetes mellitus, ketosis-prone diabetes mellitus, sudden onset diabetes mellitus, sudden-onset diabetes mellitus, type 1 diabetes mellitus, type 1 [disease/finding] diabetes mellitus, type i diabetes mellitus: [juvenile] or [insulin dependent] diabetes mellitus: [juvenile] or [insulin dependent] (disorder) diabetes type 1 diabetes type i diabetes, juvenile-onset diabetes, type 1 idd iddm iddm - insulin-dependent diabetes mellitus iddm1 insulin dependent diabetes insulin dependent diabetes mel insulin dependent diabetes mellitus insulin dependent diabetes mellitus 1 insulin-dependent diabetes insulin-dependent diabetes mellitus insulin-dependent diabetes mellitus (type i) insulin-dependent diabetes mellitus 1 jod juvenile diabetes juvenile diabetes mellitus juvenile onset diabetes juvenile onset diabetes mellitus juvenile-onset diabetes juvenile-onset diabetes mellitus ketosis prone diabetes ketosis-prone diabetes mellitus kpd mellitus, sudden-onset diabetes sudden-onset diabetes mellitus type 1 diabetes type 1 diabetes mellitus type i diabetes type i diabetes mellitus type i diabetes mellitus (disorder)
OMIM	OMIM:222100 OMIM:612227 OMIM:603932
DOID	DOID:9744 DOID:1837
MeSH	D003922
SNOMED-CT	SNOMEDCT_US_2016_09_01:46635009
Comorbidity	UMLS \| Disease \| Sentences' Count(Total Sentences:219) C0020598 \| hypoglycemia \| 108 C0011847 \| diabetes \| 82 C0022658 \| nephropathy \| 81 C0011881 \| diabetic nephropathy \| 57 C0035309 \| retinopathy \| 51 C0020598 \| hypoglycaemia \| 49 C0020456 \| hyperglycemia \| 46 C0442874 \| neuropathy \| 45 C0007570 \| celiac disease \| 34 C0042373 \| vascular disease \| 31 C0007222 \| cardiovascular disease \| 27 C0004153 \| atherosclerosis \| 23 C0011880 \| diabetic ketoacidosis \| 23 C0022658 \| renal disease \| 19 C0022658 \| kidney disease \| 18 C0020538 \| hypertension \| 17 C0011860 \| type 2 diabetes \| 16 C0007570 \| coeliac disease \| 15 C0011570 \| depression \| 14 C0011884 \| diabetic retinopathy \| 14 C0259749 \| autonomic neuropathy \| 13 C0022661 \| end-stage renal disease \| 12 C0028754 \| obesity \| 11 C0021053 \| immune disease \| 11 C0013473 \| eating disorder \| 10 C0031117 \| peripheral neuropathy \| 9 C0013473 \| eating disorders \| 9 C0021053 \| immune disorder \| 9 C0042769 \| virus infection \| 9 C0035078 \| renal failure \| 8 C0029456 \| osteoporosis \| 8 C0020456 \| hyperglycaemia \| 8 C0040147 \| thyroiditis \| 8 C0018801 \| heart failure \| 7 C0920350 \| autoimmune thyroiditis \| 7 C0948265 \| metabolic syndrome \| 7 C0020555 \| hypertrichosis \| 7 C0003864 \| arthritis \| 6 C0021053 \| immune disorders \| 6 C0152025 \| polyneuropathy \| 6 C0011334 \| caries \| 6 C0023895 \| hepatopathy \| 6 C0022116 \| ischemia \| 6 C0022661 \| chronic kidney disease \| 6 C0002871 \| anemia \| 5 C0002892 \| pernicious anemia \| 5 C0018799 \| heart disease \| 5 C0033687 \| proteinuria \| 5 C0001403 \| addison's disease \| 4 C0013537 \| eclampsia \| 4 C0032914 \| preeclampsia \| 4 C0040128 \| thyroid disease \| 4 C0022661 \| chronic renal failure \| 4 C0019158 \| hepatitis \| 4 C0011849 \| diabetes mellitus \| 4 C0085207 \| gestational diabetes \| 4 C0030305 \| pancreatitis \| 4 C0010068 \| coronary artery disease \| 4 C0003873 \| rheumatoid arthritis \| 3 C0037274 \| dermatosis \| 3 C0042870 \| vitamin d deficiency \| 3 C0026718 \| mucormycosis \| 3 C0018213 \| graves' disease \| 3 C0242350 \| erectile dysfunction \| 3 C0155765 \| microangiopathy \| 3 C0031090 \| periodontal disease \| 3 C0042870 \| vitamin d defic \| 3 C0011882 \| diabetic neuropathy \| 3 C0011854 \| type 1 diabetes \| 3 C0001339 \| acute pancreatitis \| 2 C0022661 \| end-stage kidney disease \| 2 C0011860 \| type 2 diabetes mellitus \| 2 C0497327 \| dementia \| 2 C0011334 \| dental caries \| 2 C0152020 \| gastroparesis \| 2 C0042769 \| viral infections \| 2 C0042769 \| viral infection \| 2 C0042373 \| angiopathy \| 2 C0027051 \| myocardial infarct \| 2 C0010054 \| coronary atherosclerosis \| 2 C0677607 \| hashimoto thyroiditis \| 2 C0017601 \| glaucoma \| 2 C0014544 \| epilepsy \| 2 C1333387 \| endocrine syndrome \| 2 C0020619 \| hypogonadism \| 2 C0027051 \| myocardial infarction \| 2 C0004096 \| asthma \| 2 C0017919 \| glycogenosis \| 2 C0043207 \| wolfram syndrome \| 2 C0022661 \| end stage renal disease \| 2 C0024266 \| lymphocytic choriomeningitis \| 2 C0007222 \| cardiovascular disorders \| 2 C0042373 \| vascular disorders \| 2 C0679466 \| cognitive deficits \| 2 C0019196 \| hepatitis c \| 2 C0852949 \| arterial disease \| 2 C0042373 \| vascular disorder \| 2 C0020676 \| hypothyroidism \| 2 C0020459 \| hyperinsulinemia \| 2 C0021400 \| influenza \| 1 C0013595 \| eczematous dermatitis \| 1 C0041318 \| tuberculous meningitis \| 1 C0027059 \| myocarditis \| 1 C1561644 \| chronic kidney disease (ckd) \| 1 C0029132 \| optic neuropathy \| 1 C0041296 \| tuberculosis \| 1 C0042373 \| vascular diseases \| 1 C0020615 \| low blood sugar \| 1 C0040053 \| thrombosis \| 1 C0017160 \| gastroenteritis \| 1 C0553662 \| juvenile ra \| 1 C0031090 \| periodontal diseases \| 1 C0004936 \| mental disorders \| 1 C0003469 \| anxiety disorders \| 1 C0026946 \| fungal infections \| 1 C0001403 \| primary adrenal insufficiency \| 1 C0036341 \| schizophrenia \| 1 C0010068 \| coronary heart disease \| 1 C0271051 \| macular edema \| 1 C0027726 \| nephrotic syndrome \| 1 C0022658 \| renal diseases \| 1 C0021670 \| insulinoma \| 1 C0002020 \| alexithymia \| 1 C0008312 \| primary biliary cirrhosis \| 1 C0085273 \| parvovirus b19 infection \| 1 C0013418 \| dystocia \| 1 C0017574 \| gingivitis \| 1 C0085292 \| stiff person syndrome \| 1 C0019163 \| hepatitis b \| 1 C0037317 \| sleep disturbance \| 1 C0022661 \| end-stage renal failure \| 1 C0154830 \| proliferative diabetic retinopathy \| 1 C0013903 \| ellis-van creveld syndrome \| 1 C0021390 \| inflammatory bowel disease \| 1 C0340274 \| gestational hypertension \| 1 C0023895 \| liver disease \| 1 C0027947 \| neutropenia \| 1 C0011860 \| niddm \| 1 C0025064 \| mediastinitis \| 1 C0878544 \| cardiomyopathy \| 1 C0006840 \| candidosis \| 1 C0311223 \| frozen shoulder \| 1 C0028756 \| morbid obesity \| 1 C0018801 \| cardiac failure \| 1 C0022408 \| arthropathy \| 1 C0039841 \| thiamine deficiency \| 1 C0042900 \| vitiligo \| 1 C0033953 \| sexual dysfunction \| 1 C0085110 \| severe combined immunodeficiency \| 1 C0264716 \| chronic heart failure \| 1 C0007222 \| cardiovascular diseases \| 1 C0010481 \| cushing's syndrome \| 1 C0006111 \| brain disorders \| 1 C0003469 \| anxiety disorder \| 1 C2607914 \| allergic rhinitis \| 1 C0026846 \| muscle atrophy \| 1 C0020479 \| familial dysbetalipoproteinemia \| 1 C0022735 \| hypogonadotropic hypogonadism \| 1 C0022735 \| klinefelter's syndrome \| 1 C0002895 \| sickle cell anemia \| 1 C0035078 \| kidney failure \| 1 C0235974 \| pancreatic cancer \| 1 C0004623 \| bacterial infection \| 1 C0085110 \| severe combined immunodefic \| 1 C0011603 \| dermatitis \| 1 C0003175 \| anthrax \| 1 C0015469 \| facial paralysis \| 1 C0030805 \| pemphigoid \| 1 C0004623 \| bacterial infections \| 1 C0268542 \| ornithine transcarbamylase deficiency \| 1 C0730285 \| diabetic macular edema \| 1 C0022661 \| end stage renal failure \| 1 C0025289 \| meningitis \| 1 C0948740 \| pituitary hypoplasia \| 1 C0023890 \| cirrhosis \| 1 C0006849 \| oral candidosis \| 1 C0020617 \| hypoglycemic coma \| 1 C0020626 \| hypoparathyroidism \| 1 C0030805 \| bullous pemphigoid \| 1 C0020443 \| hypercholesterolemia \| 1 C0035455 \| rhinitis \| 1 C0520679 \| obstructive sleep apnoea \| 1 C0001623 \| adrenal insufficiency \| 1 C0015397 \| eye disease \| 1 C0085207 \| maternal diabetes \| 1 C0677607 \| hashimoto's thyroiditis \| 1 C0022660 \| acute renal failure \| 1 C0026946 \| fungal infection \| 1 C0010674 \| cystic fibrosis \| 1 C0085074 \| granuloma annulare \| 1 C0019196 \| hepatitis c infection \| 1 C0162316 \| iron-deficiency anemia \| 1 C0037315 \| sleep apnoea \| 1 C0003467 \| anxiety \| 1 C0206081 \| hyperandrogenism \| 1 C0011991 \| diarrhea \| 1 C0006142 \| breast cancer \| 1 C0008312 \| biliary cirrhosis \| 1 C0040259 \| tinea pedis \| 1 C0037317 \| sleep disturbances \| 1 C0031099 \| periodontitis \| 1 C0040261 \| onychomycosis \| 1 C0006111 \| brain disorder \| 1 C0011854 \| insulin-dependent diabetes \| 1 C0029443 \| osteomyelitis \| 1 C0348802 \| rhinocerebral mucormycosis \| 1 C0022353 \| neonatal jaundice \| 1 C0040188 \| tic disorders \| 1 C0035579 \| hypovitaminosis d \| 1 C0027538 \| necrobiosis lipoidica \| 1 C0006625 \| cachexia \| 1 C1565489 \| renal insufficiency \| 1 C0040128 \| thyroid diseases \| 1 C0011880 \| diabetic ketosis \| 1 C0032285 \| pneumonia \| 1 C0040034 \| thrombocytopenia \| 1 C0040128 \| thyroid disorders \| 1 C0032460 \| polycystic ovary syndrome \| 1 C0004096 \| bronchial asthma \| 1
Curated Gene	Entrez_id \| Symbol \| Resource(Total Genes:80) HLA-DRB1 \| 3123 \| CTD_human;GHR INS \| 3630 \| CTD_human;GHR CLEC16A \| 23274 \| CTD_human;GWASCAT TNF \| 7124 \| CTD_human IL6 \| 3569 \| GHR HLA-DQA1 \| 3117 \| CTD_human;GWASCAT;GHR ITPR3 \| 3710 \| CTD_human;GHR BACH2 \| 60468 \| CTD_human;GWASCAT CP \| 1356 \| CTD_human NOS3 \| 4846 \| CTD_human CTLA4 \| 1493 \| GWASCAT;GHR STAT3 \| 6774 \| CTD_human IFNG \| 3458 \| CTD_human CRP \| 1401 \| CTD_human IGF2 \| 3481 \| GWASCAT COLEC10 \| 10584 \| GWASCAT HNF1A \| 6927 \| CLINVAR;CTD_human;GHR CCR5 \| 1234 \| GHR ABCC8 \| 6833 \| CTD_human KIAA1109 \| 84162 \| GWASCAT PHTF1 \| 10745 \| GWASCAT HP \| 3240 \| CTD_human TYK2 \| 7297 \| GWASCAT CAT \| 847 \| CTD_human PTPN22 \| 26191 \| CTD_human;UNIPROT;GWASCAT;GHR HLA-DQB1 \| 3119 \| CTD_human;GHR PGM1 \| 5236 \| GWASCAT IL2RA \| 3559 \| CTD_human;GWASCAT;GHR CCL20 \| 6364 \| CTD_human JAZF1-AS1 \| 100128081 \| GWASCAT IGF1 \| 3479 \| CTD_human IL10 \| 3586 \| CTD_human GLIS3 \| 169792 \| CTD_human;GWASCAT AIFM1 \| 9131 \| CTD_human NOS1 \| 4842 \| CTD_human IFIH1 \| 64135 \| GWASCAT CLECL1 \| 160365 \| GWASCAT FGF21 \| 26291 \| CTD_human SLC11A1 \| 6556 \| CTD_human SUMO4 \| 387082 \| GHR HSD11B2 \| 3291 \| CTD_human PRKCQ \| 5588 \| CTD_human;GWASCAT PTPN2 \| 5771 \| GWASCAT DDIT3 \| 1649 \| CTD_human ZFP36L1 \| 677 \| GWASCAT CD226 \| 10666 \| GWASCAT FOXP3 \| 50943 \| CTD_human;GHR C1QTNF6 \| 114904 \| CTD_human SH2B3 \| 10019 \| CTD_human;GWASCAT SLC29A3 \| 55315 \| CTD_human PRKD2 \| 25865 \| GWASCAT IKZF4 \| 64375 \| GWASCAT OAS1 \| 4938 \| CTD_human;GHR CHRM2 \| 1129 \| CTD_human CASP12 \| 100506742 \| CTD_human HLA-DRA \| 3122 \| GWASCAT KCNJ11 \| 3767 \| CTD_human PAX4 \| 5078 \| CTD_human;UNIPROT LMO7 \| 4008 \| GWASCAT SKAP2 \| 8935 \| GWASCAT GSDMB \| 55876 \| GWASCAT NAA25 \| 80018 \| GWASCAT MEG3 \| 55384 \| GWASCAT CTSH \| 1512 \| CTD_human;GWASCAT HPSE2 \| 60495 \| GWASCAT CD69 \| 969 \| CTD_human;GWASCAT IGF2-AS \| 51214 \| GWASCAT UBASH3A \| 53347 \| GWASCAT CUX2 \| 23316 \| GWASCAT CENPW \| 387103 \| GWASCAT ERBB3 \| 2065 \| GWASCAT EFR3B \| 22979 \| GWASCAT INS-IGF2 \| 723961 \| GWASCAT GAB3 \| 139716 \| GWASCAT SIRPG \| 55423 \| GWASCAT IL19 \| 29949 \| CTD_human DNAH2 \| 146754 \| GWASCAT CLEC2D \| 29121 \| GWASCAT IL27 \| 246778 \| CTD_human IL20 \| 50604 \| CTD_human
Inferring Gene	Entrez_id \| Symbol \| Resource(Total Genes:389) 6833 \| ABCC8 \| infer 132612 \| ADAD1 \| infer 3899 \| AFF3 \| infer 10554 \| AGPAT1 \| infer 60468 \| BACH2 \| infer 56244 \| BTNL2 \| infer 114904 \| C1QTNF6 \| infer 717 \| C2 \| infer 10665 \| C6orf10 \| infer 57827 \| C6orf47 \| infer 133690 \| CAPSL \| infer 1236 \| CCR7 \| infer 10666 \| CD226 \| infer 969 \| CD69 \| infer 387103 \| CENPW \| infer 629 \| CFB \| infer 23274 \| CLEC16A \| infer 29121 \| CLEC2D \| infer 1493 \| CTLA4 \| infer 440387 \| CTRB2 \| infer 1512 \| CTSH \| infer 23316 \| CUX2 \| infer 729816 \| DHFRP2 \| infer 146754 \| DNAH2 \| infer 22979 \| EFR3B \| infer 2065 \| ERBB3 \| infer 115352 \| FCRL3 \| infer 2249 \| FGF4 \| infer 2355 \| FOSL2 \| infer 23105 \| FSTL4 \| infer 139716 \| GAB3 \| infer 169792 \| GLIS3 \| infer 2813 \| GP2 \| infer 55876 \| GSDMB \| infer 352961 \| HCG26 \| infer 3105 \| HLA-A \| infer 3106 \| HLA-B \| infer 3107 \| HLA-C \| infer 3111 \| HLA-DOA \| infer 3112 \| HLA-DOB \| infer 3115 \| HLA-DPB1 \| infer 3117 \| HLA-DQA1 \| infer 3118 \| HLA-DQA2 \| infer 3119 \| HLA-DQB1 \| infer 3120 \| HLA-DQB2 \| infer 3122 \| HLA-DRA \| infer 3123 \| HLA-DRB1 \| infer 3132 \| HLA-DRB9 \| infer 267015 \| HLA-S \| infer 267017 \| HLA-Z \| infer 100131609 \| HNRNPA1P2 \| infer 60495 \| HPSE2 \| infer 3304 \| HSPA1B \| infer 3305 \| HSPA1L \| infer 64135 \| IFIH1 \| infer 3479 \| IGF1 \| infer 3481 \| IGF2 \| infer 3553 \| IL1B \| infer 3558 \| IL2 \| infer 64806 \| IL25 \| infer 246778 \| IL27 \| infer 3559 \| IL2RA \| infer 3560 \| IL2RB \| infer 3569 \| IL6 \| infer 3575 \| IL7R \| infer 3630 \| INS \| infer 723961 \| INS-IGF2 \| infer 221895 \| JAZF1 \| infer 3767 \| KCNJ11 \| infer 84162 \| KIAA1109 \| infer 3802 \| KIR2DL1 \| infer 3811 \| KIR3DL1 \| infer 3813 \| KIR3DS1 \| infer 4008 \| LMO7 \| infer 23566 \| LPAR3 \| infer 55384 \| MEG3 \| infer 100507436 \| MICA \| infer 4277 \| MICB \| infer 4439 \| MSH5 \| infer 80018 \| NAA25 \| infer 4855 \| NOTCH4 \| infer 10831 \| NPM1P7 \| infer 5133 \| PDCD1 \| infer 5236 \| PGM1 \| infer 10745 \| PHTF1 \| infer 5468 \| PPARG \| infer 9374 \| PPT2 \| infer 5551 \| PRF1 \| infer 5588 \| PRKCQ \| infer 25865 \| PRKD2 \| infer 5696 \| PSMB8 \| infer 56984 \| PSMG2 \| infer 5771 \| PTPN2 \| infer 26191 \| PTPN22 \| infer 10125 \| RASGRP1 \| infer 6048 \| RNF5 \| infer 100271271 \| RPL11P3 \| infer 644020 \| RPL32P23 \| infer 100271323 \| RPL36AP13 \| infer 100271203 \| RPL39P23 \| infer 100271063 \| RPS14P1 \| infer 6231 \| RPS26 \| infer 100270827 \| RPS2P14 \| infer 100271600 \| RPS3AP51 \| infer 54665 \| RSBN1 \| infer 10019 \| SH2B3 \| infer 55423 \| SIRPG \| infer 8935 \| SKAP2 \| infer 80736 \| SLC44A4 \| infer 26797 \| SNORD52 \| infer 729992 \| ST13P1 \| infer 8859 \| STK19 \| infer 6821 \| SUOX \| infer 6890 \| TAP1 \| infer 6891 \| TAP2 \| infer 7054 \| TH \| infer 7124 \| TNF \| infer 4982 \| TNFRSF11B \| infer 7142 \| TNP2 \| infer 7148 \| TNXB \| infer 7297 \| TYK2 \| infer 53347 \| UBASH3A \| infer 7421 \| VDR \| infer 221527 \| ZBTB12 \| infer 124626 \| ZPBP2 \| infer 28 \| ABO \| infer 1636 \| ACE \| infer 52 \| ACP1 \| infer 100 \| ADA \| infer 80332 \| ADAM33 \| infer 9370 \| ADIPOQ \| infer 132 \| ADK \| infer 183 \| AGT \| infer 199 \| AIF1 \| infer 326 \| AIRE \| infer 231 \| AKR1B1 \| infer 345 \| APOC3 \| infer 348 \| APOE \| infer 367 \| AR \| infer 567 \| B2M \| infer 596 \| BCL2 \| infer 685 \| BTC \| infer 800 \| CALD1 \| infer 840 \| CASP7 \| infer 847 \| CAT \| infer 868 \| CBLB \| infer 6347 \| CCL2 \| infer 729230 \| CCR2 \| infer 1234 \| CCR5 \| infer 29126 \| CD274 \| infer 940 \| CD28 \| infer 916 \| CD3E \| infer 920 \| CD4 \| infer 962 \| CD48 \| infer 1604 \| CD55 \| infer 942 \| CD86 \| infer 3075 \| CFH \| infer 1356 \| CP \| infer 1378 \| CR1 \| infer 6387 \| CXCL12 \| infer 1535 \| CYBA \| infer 1591 \| CYP24A1 \| infer 1594 \| CYP27B1 \| infer 1565 \| CYP2D6 \| infer 1616 \| DAXX \| infer 1628 \| DBP \| infer 1634 \| DCN \| infer 2113 \| ETS1 \| infer 2169 \| FABP2 \| infer 8772 \| FADD \| infer 356 \| FASLG \| infer 50943 \| FOXP3 \| infer 2539 \| G6PD \| infer 2571 \| GAD1 \| infer 2572 \| GAD2 \| infer 51083 \| GAL \| infer 2591 \| GALNT3 \| infer 2645 \| GCK \| infer 2784 \| GNB3 \| infer 3113 \| HLA-DPA1 \| infer 3127 \| HLA-DRB5 \| infer 3172 \| HNF4A \| infer 3240 \| HP \| infer 3291 \| HSD11B2 \| infer 3339 \| HSPG2 \| infer 50941 \| IBD5 \| infer 3383 \| ICAM1 \| infer 3456 \| IFNB1 \| infer 3458 \| IFNG \| infer 3467 \| IFNW1 \| infer 3485 \| IGFBP2 \| infer 3488 \| IGFBP5 \| infer 3586 \| IL10 \| infer 3593 \| IL12B \| infer 3594 \| IL12RB1 \| infer 3595 \| IL12RB2 \| infer 3596 \| IL13 \| infer 3606 \| IL18 \| infer 10068 \| IL18BP \| infer 3552 \| IL1A \| infer 3554 \| IL1R1 \| infer 3556 \| IL1RAP \| infer 3557 \| IL1RN \| infer 59067 \| IL21 \| infer 50615 \| IL21R \| infer 3565 \| IL4 \| infer 3566 \| IL4R \| infer 3643 \| INSR \| infer 3659 \| IRF1 \| infer 3663 \| IRF5 \| infer 3394 \| IRF8 \| infer 3667 \| IRS1 \| infer 3710 \| ITPR3 \| infer 3803 \| KIR2DL2 \| infer 100132285 \| KIR2DS2 \| infer 3810 \| KIR2DS5 \| infer 3902 \| LAG3 \| infer 3932 \| LCK \| infer 4023 \| LPL \| infer 4041 \| LRP5 \| infer 7940 \| LST1 \| infer 4049 \| LTA \| infer 4153 \| MBL2 \| infer 4340 \| MOG \| infer 4567 \| MT-TL1 \| infer 10 \| NAT2 \| infer 4760 \| NEUROD1 \| infer 4761 \| NEUROD2 \| infer 4790 \| NFKB1 \| infer 4792 \| NFKBIA \| infer 4795 \| NFKBIL1 \| infer 64127 \| NOD2 \| infer 4846 \| NOS3 \| infer 1728 \| NQO1 \| infer 4521 \| NUDT1 \| infer 4938 \| OAS1 \| infer 4939 \| OAS2 \| infer 4940 \| OAS3 \| infer 23569 \| PADI4 \| infer 142 \| PARP1 \| infer 5078 \| PAX4 \| infer 5122 \| PCSK1 \| infer 80380 \| PDCD1LG2 \| infer 5134 \| PDCD2 \| infer 5444 \| PON1 \| infer 5689 \| PSMB1 \| infer 5698 \| PSMB9 \| infer 5788 \| PTPRC \| infer 5798 \| PTPRN \| infer 5836 \| PYGL \| infer 5967 \| REG1A \| infer 5968 \| REG1B \| infer 861 \| RUNX1 \| infer 6257 \| RXRB \| infer 6400 \| SEL1L \| infer 6402 \| SELL \| infer 6556 \| SLC11A1 \| infer 6583 \| SLC22A4 \| infer 6584 \| SLC22A5 \| infer 9368 \| SLC9A3R1 \| infer 8651 \| SOCS1 \| infer 9021 \| SOCS3 \| infer 9655 \| SOCS5 \| infer 6648 \| SOD2 \| infer 11005 \| SPINK5 \| infer 387082 \| SUMO4 \| infer 27097 \| TAF5L \| infer 6892 \| TAPBP \| infer 6908 \| TBP \| infer 6932 \| TCF7 \| infer 7040 \| TGFB1 \| infer 7070 \| THY1 \| infer 7097 \| TLR2 \| infer 7098 \| TLR3 \| infer 7099 \| TLR4 \| infer 7132 \| TNFRSF1A \| infer 7133 \| TNFRSF1B \| infer 8718 \| TNFRSF25 \| infer 943 \| TNFRSF8 \| infer 944 \| TNFSF8 \| infer 119 \| ADD2 \| infer 154 \| ADRB2 \| infer 177 \| AGER \| infer 185 \| AGTR1 \| infer 186 \| AGTR2 \| infer 55937 \| APOM \| infer 2583 \| B4GALNT1 \| infer 55024 \| BANK1 \| infer 637 \| BID \| infer 54796 \| BNC2 \| infer 151888 \| BTLA \| infer 11118 \| BTN3A2 \| infer 727 \| C5 \| infer 833 \| CARS \| infer 6366 \| CCL21 \| infer 929 \| CD14 \| infer 958 \| CD40 \| infer 965 \| CD58 \| infer 1017 \| CDK2 \| infer 1021 \| CDK6 \| infer 54901 \| CDKAL1 \| infer 1192 \| CLIC1 \| infer 84735 \| CNDP1 \| infer 55748 \| CNDP2 \| infer 1302 \| COL11A2 \| infer 1490 \| CTGF \| infer 3627 \| CXCL10 \| infer 4283 \| CXCL9 \| infer 23564 \| DDAH2 \| infer 1672 \| DEFB1 \| infer 8788 \| DLK1 \| infer 9844 \| ELMO1 \| infer 51752 \| ERAP1 \| infer 83648 \| FAM167A \| infer 257019 \| FRMD3 \| infer 2538 \| G6PC \| infer 2690 \| GHR \| infer 145258 \| GSC \| infer 2944 \| GSTM1 \| infer 2952 \| GSTT1 \| infer 84868 \| HAVCR2 \| infer 3087 \| HHEX \| infer 3135 \| HLA-G \| infer 6927 \| HNF1A \| infer 3303 \| HSPA1A \| infer 29851 \| ICOS \| infer 3416 \| IDE \| infer 64375 \| IKZF4 \| infer 3592 \| IL12A \| infer 8807 \| IL18RAP \| infer 29949 \| IL19 \| infer 50604 \| IL20 \| infer 8660 \| IRS2 \| infer 3684 \| ITGAM \| infer 3798 \| KIF5A \| infer 3804 \| KIR2DL3 \| infer 3805 \| KIR2DL4 \| infer 57292 \| KIR2DL5A \| infer 3806 \| KIR2DS1 \| infer 3808 \| KIR2DS3 \| infer 3809 \| KIR2DS4 \| infer 3812 \| KIR3DL2 \| infer 115653 \| KIR3DL3 \| infer 3952 \| LEP \| infer 3953 \| LEPR \| infer 4026 \| LPP \| infer 55586 \| MIOX \| infer 4524 \| MTHFR \| infer 4552 \| MTRR \| infer 4650 \| MYO9B \| infer 22861 \| NLRP1 \| infer 8829 \| NRP1 \| infer 8929 \| PHOX2B \| infer 5428 \| POLG \| infer 80863 \| PRRT1 \| infer 10279 \| PRSS16 \| infer 5869 \| RAB5B \| infer 5996 \| RGS1 \| infer 6015 \| RING1 \| infer 6331 \| SCN5A \| infer 55315 \| SLC29A3 \| infer 169026 \| SLC30A8 \| infer 4086 \| SMAD1 \| infer 4088 \| SMAD3 \| infer 4089 \| SMAD4 \| infer 4090 \| SMAD5 \| infer 114815 \| SORCS1 \| infer 6774 \| STAT3 \| infer 6775 \| STAT4 \| infer 117289 \| TAGAP \| infer 7112 \| TMPO \| infer 7128 \| TNFAIP3 \| infer 8764 \| TNFRSF14 \| infer 7185 \| TRAF1 \| infer 7295 \| TXN \| infer 10497 \| UNC13B \| infer 7422 \| VEGFA \| infer 256764 \| WDR72 \| infer 64132 \| XYLT2 \| infer 57178 \| ZMIZ1 \| infer 3109 \| HLA-DMB \| infer 23242 \| COBL \| infer 1735 \| DIO3 \| infer 94103 \| ORMDL3 \| infer 58531 \| PRM3 \| infer 5770 \| PTPN1 \| infer 5781 \| PTPN11 \| infer 388015 \| RTL1 \| infer 10906 \| TRAFD1 \| infer
Text Mined Gene	(Waiting for update.)
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Disease ID	953
Disease	diabetes mellitus, insulin-dependent
Integrated Phenotype	HPO \| Name(Total Integrated Phenotypes:7) HP:0000103 \| Polyuria HP:0001993 \| Ketoacidosis HP:0000819 \| Diabetes mellitus HP:0002715 \| Abnormality of the immune system HP:0003074 \| High blood glucose HP:0002591 \| Voracious appetite HP:0001959 \| Polydipsia
Text Mined Phenotype	HPO \| Name \| Sentences' Count(Total Phenotypes:171) HP:0001943 \| Hypoglycemia \| 155 HP:0000112 \| Nephropathy \| 79 HP:0000488 \| Noninflammatory retina disease \| 51 HP:0002960 \| Autoimmune condition \| 47 HP:0003074 \| High blood glucose \| 46 HP:0002608 \| Celiac disease \| 33 HP:0001993 \| Ketoacidosis \| 31 HP:0012594 \| High urine albumin levels \| 30 HP:0002621 \| Atherosclerosis \| 23 HP:0001953 \| Diabetic ketosis \| 22 HP:0000855 \| Insulin resistance \| 21 HP:0003774 \| End-stage renal failure \| 20 HP:0000822 \| Hypertension \| 17 HP:0001717 \| Coronary artery calcification \| 15 HP:0000716 \| Depression \| 14 HP:0012592 \| Albuminuria \| 13 HP:0001513 \| Obesity \| 11 HP:0001988 \| hypoglycemia, recurrent \| 11 HP:0009830 \| Peripheral neuritis \| 9 HP:0000083 \| Renal insufficiency \| 9 HP:0000939 \| Osteoporosis \| 8 HP:0100646 \| Thyroiditis \| 8 HP:0000998 \| Hypertrichosis \| 7 HP:0001635 \| Congestive heart failure \| 7 HP:0000670 \| Dental caries \| 6 HP:0012622 \| Chronic kidney disease \| 6 HP:0001271 \| Polyneuropathy \| 6 HP:0002459 \| Dysautonomia \| 6 HP:0001369 \| Arthritis \| 6 HP:0009800 \| gestational diabetes \| 5 HP:0000093 \| Proteinuria \| 5 HP:0008207 \| Addison's disease \| 5 HP:0001297 \| Cerebral vascular events \| 5 HP:0001903 \| Anemia \| 5 HP:0100543 \| Cognitive deficits \| 5 HP:0001268 \| Mental deterioration \| 4 HP:0001677 \| Coronary artery disease \| 4 HP:0000938 \| Decreased bone mineral density \| 4 HP:0000820 \| Thyroid abnormality \| 4 HP:0001733 \| Pancreatic inflammation \| 4 HP:0012115 \| Liver inflammation \| 4 HP:0001548 \| Overgrowth \| 4 HP:0000819 \| Diabetes mellitus \| 4 HP:0100601 \| Eclampsia \| 4 HP:0100602 \| Pre-eclampsia \| 4 HP:0012531 \| Pain \| 3 HP:0000505 \| Poor vision \| 3 HP:0002099 \| Asthma \| 3 HP:0000872 \| Hashimoto's thyroiditis \| 3 HP:0004325 \| Low body weight \| 3 HP:0001824 \| Weight loss \| 3 HP:0001370 \| Rheumatoid arthritis \| 3 HP:0000802 \| Erectile dysfunction \| 3 HP:0100512 \| Vitamin D deficiency \| 3 HP:0001946 \| High levels of ketone bodies \| 3 HP:0011998 \| Postprandial hyperglycemia \| 3 HP:0012393 \| Allergy \| 2 HP:0100578 \| Lipoatrophy \| 2 HP:0000217 \| Dry mouth syndrome \| 2 HP:0007178 \| Motor polyneuropathy \| 2 HP:0000726 \| Dementia \| 2 HP:0000821 \| Underactive thyroid \| 2 HP:0012432 \| Chronic fatigue \| 2 HP:0002027 \| Abdominal pain \| 2 HP:0012378 \| Fatigue \| 2 HP:0001259 \| Coma \| 2 HP:0002578 \| Gastroparesis \| 2 HP:0000842 \| Elevated insulin level \| 2 HP:0001397 \| Hepatic steatosis \| 2 HP:0040216 \| Hypoinsulinemia \| 2 HP:0003076 \| Glucosuria \| 2 HP:0004929 \| Coronary artherosclerosis \| 2 HP:0012533 \| Allodynia \| 2 HP:0001298 \| Encephalopathy \| 2 HP:0001941 \| acidemia \| 2 HP:0000135 \| Hypogonadism \| 2 HP:0001658 \| Myocardial infarction \| 2 HP:0003287 \| Abnormality of mitochondrial metabolism \| 2 HP:0000708 \| Behavioral problems \| 2 HP:0000969 \| Dropsy \| 2 HP:0002240 \| Enlarged liver \| 2 HP:0001735 \| Acute pancreatitis \| 2 HP:0200123 \| Chronic liver inflammation \| 2 HP:0000501 \| Glaucoma \| 2 HP:0003202 \| Neurogenic muscle atrophy, especially in the lower limbs \| 2 HP:0012197 \| Insulinoma \| 1 HP:0000078 \| Genital abnormalities \| 1 HP:0000529 \| Slowly progressive visual loss \| 1 HP:0003077 \| Hyperlipidemia \| 1 HP:0002721 \| Immunodeficiency \| 1 HP:0005110 \| Atrial fibrillation \| 1 HP:0001394 \| Hepatic cirrhosis \| 1 HP:0002615 \| Low blood pressure \| 1 HP:0006579 \| Neonatal jaundice \| 1 HP:0002613 \| Biliary cirrhosis \| 1 HP:0004430 \| Severe combined immunodeficiency \| 1 HP:0000952 \| Yellow skin \| 1 HP:0200119 \| Acute liver inflammation \| 1 HP:0001891 \| Iron-deficiency anemia \| 1 HP:0001919 \| Acute renal failure \| 1 HP:0002104 \| Absence of spontaneous respiration \| 1 HP:0008189 \| Insulin insensitivity \| 1 HP:0004349 \| Reduced bone mineral density \| 1 HP:0002360 \| Sleep disturbance \| 1 HP:0001942 \| Metabolic acidosis \| 1 HP:0002900 \| Hypokalemia \| 1 HP:0011413 \| Shoulder dystocia \| 1 HP:0002894 \| Neoplasia of the pancreas \| 1 HP:0100806 \| Sepsis \| 1 HP:0005202 \| Helicobacter pylori infection \| 1 HP:0001260 \| Dysarthric speech \| 1 HP:0002591 \| Voracious appetite \| 1 HP:0002138 \| Subarachnoid hemorrhage \| 1 HP:0001325 \| Coma caused by low blood sugar \| 1 HP:0001875 \| Neutropenia \| 1 HP:0000858 \| Menstrual irregularity \| 1 HP:0100753 \| Schizophrenia \| 1 HP:0012569 \| Delayed menarche \| 1 HP:0003116 \| Abnormal echocardiography \| 1 HP:0430025 \| Bilateral facial paralysis \| 1 HP:0010889 \| Lunatomalacia \| 1 HP:0002014 \| Diarrhea \| 1 HP:0000107 \| Renal cyst \| 1 HP:0100033 \| Tic disorder \| 1 HP:0005101 \| High-frequency deafness \| 1 HP:0001278 \| Orthostatic hypotension \| 1 HP:0002720 \| Decreased immunoglobulin A \| 1 HP:0012743 \| Central obesity \| 1 HP:0004943 \| Accelerated atherosclerosis \| 1 HP:0000230 \| Inflamed gums \| 1 HP:0003002 \| Breast carcinoma \| 1 HP:0005978 \| Noninsulin dependent diabetes mellitus \| 1 HP:0030795 \| Reduced C-peptide level \| 1 HP:0000704 \| Pyorrhea \| 1 HP:0001638 \| Cardiomyopathy \| 1 HP:0005387 \| Combined immunodeficiency \| 1 HP:0012203 \| Onychomycosis \| 1 HP:0002197 \| Generalized seizures \| 1 HP:0001342 \| Intracerebral hemorrhage \| 1 HP:0000100 \| Nephrosis \| 1 HP:0001045 \| Blotchy loss of skin color \| 1 HP:0030841 \| Toe pain \| 1 HP:0003124 \| Elevated serum cholesterol \| 1 HP:0040049 \| Macular edema \| 1 HP:0002754 \| Bone infection \| 1 HP:0000713 \| Agitation \| 1 HP:0001138 \| Damaged optic nerve \| 1 HP:0001287 \| Meningitis \| 1 HP:0000829 \| Hypoparathyroidism \| 1 HP:0011014 \| Abnormal glucose homeostasis \| 1 HP:0001944 \| Dehydration \| 1 HP:0002597 \| Abnormality of blood vessels \| 1 HP:0004326 \| Cachexia \| 1 HP:0000825 \| Hyperinsulinaemic hypoglycaemia \| 1 HP:0001061 \| Acne \| 1 HP:0012584 \| Bilateral renal hypoplasia \| 1 HP:0003193 \| Allergic rhinitis \| 1 HP:0000739 \| Anxiety \| 1 HP:0000846 \| Hypoadrenalism \| 1 HP:0011058 \| Generalized periodontitis \| 1 HP:0007209 \| Facial paresis \| 1 HP:0000089 \| Small kidneys \| 1 HP:0000622 \| Blurred vision \| 1 HP:0010535 \| Sleep apnea \| 1 HP:0001873 \| Low platelet count \| 1 HP:0012819 \| Myocarditis \| 1 HP:0002028 \| Chronic diarrhea \| 1 HP:0012384 \| Nasal inflammation \| 1 HP:0002090 \| Pneumonia \| 1 HP:0000718 \| Aggressive behaviour \| 1 HP:0002354 \| Memory loss \| 1

Disease ID	953
Disease	diabetes mellitus, insulin-dependent
Manually Symptom	(Waiting for update.)
Text Mined Symptom	UMLS \| Name \| Sentences' Count(Total Symptoms:87) C0020598 \| hypoglycemia \| 106 C0022658 \| nephropathy \| 75 C1393529 \| vascular complications \| 59 C0011881 \| diabetic nephropathy \| 54 C0035309 \| retinopathy \| 49 C0020598 \| hypoglycaemia \| 47 C0020456 \| hyperglycemia \| 45 C0442874 \| neuropathy \| 43 C0007570 \| celiac disease \| 32 C0042373 \| vascular disease \| 29 C0730345 \| microalbuminuria \| 29 C0007222 \| cardiovascular disease \| 26 C0004153 \| atherosclerosis \| 23 C0427008 \| stiffness \| 21 C0022658 \| kidney disease \| 18 C0020538 \| hypertension \| 17 C0022658 \| renal disease \| 17 C0011860 \| type 2 diabetes \| 15 C1611184 \| coronary artery calcification \| 15 C0007570 \| coeliac disease \| 14 C0011570 \| depression \| 13 C0011884 \| diabetic retinopathy \| 12 C0009450 \| infection \| 12 C0856169 \| endothelial dysfunction \| 12 C0004364 \| autoimmune disease \| 11 C0259749 \| autonomic neuropathy \| 11 C0022661 \| end-stage renal disease \| 9 C0021053 \| immune diseases \| 8 C0231303 \| distress \| 8 C0035078 \| renal failure \| 8 C0013473 \| eating disorders \| 8 C0497406 \| overweight \| 7 C0948265 \| metabolic syndrome \| 7 C0031117 \| peripheral neuropathy \| 7 C0029456 \| osteoporosis \| 7 C0020456 \| hyperglycaemia \| 6 C0339467 \| proliferative retinopathy \| 6 C0022661 \| chronic kidney disease \| 6 C0152025 \| polyneuropathy \| 5 C0018801 \| heart failure \| 5 C0033687 \| proteinuria \| 5 C0745153 \| hypoglycemic episodes \| 5 C0920350 \| autoimmune thyroiditis \| 5 C0271672 \| diabetic complications \| 5 C0001403 \| addison's disease \| 4 C0038454 \| stroke \| 4 C0002871 \| anemia \| 4 C0010068 \| coronary artery disease \| 4 C0242339 \| dyslipidemia \| 4 C0018799 \| heart disease \| 4 C0018213 \| graves' disease \| 3 C0014378 \| enterovirus infection \| 3 C0178468 \| autoimmune thyroid disease \| 3 C0002892 \| pernicious anemia \| 3 C0853088 \| hypoglycaemia unawareness \| 3 C0853088 \| hypoglycemia unawareness \| 3 C0010054 \| coronary atherosclerosis \| 2 C0155765 \| microangiopathy \| 2 C0028754 \| obesity \| 2 C0011882 \| diabetic neuropathy \| 2 C0085584 \| encephalopathy \| 2 C2609253 \| macrovascular disease \| 2 C0852949 \| arterial disease \| 2 C0152020 \| gastroparesis \| 2 C1280433 \| lipoatrophy \| 2 C0348024 \| thyroid dysfunction \| 2 C1740787 \| cardiac autonomic neuropathy \| 1 C0013473 \| eating disorder \| 1 C0393911 \| autonomic failure \| 1 C0035579 \| hypovitaminosis d \| 1 C0577631 \| carotid atherosclerosis \| 1 C0086132 \| depressive symptoms \| 1 C1301700 \| cardiovascular morbidity \| 1 C0006111 \| brain disorders \| 1 C0033953 \| sexual dysfunction \| 1 C1096293 \| macroangiopathy \| 1 C0031099 \| periodontitis \| 1 C0730285 \| diabetic macular edema \| 1 C0026846 \| muscle atrophy \| 1 C0007222 \| cardiovascular diseases \| 1 C0878544 \| cardiomyopathy \| 1 C0022661 \| end stage renal disease \| 1 C0040128 \| thyroid disorder \| 1 C0030193 \| pain \| 1 C0022661 \| end-stage renal failure \| 1 C0154830 \| proliferative diabetic retinopathy \| 1 C0020615 \| low blood sugar \| 1

Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)

All Snps(Total Genotypes:647)
snpId	pubmedId	geneId	geneSymbol	diseaseId	sourceId	sentence	score	Year	geneSymbol_dbSNP	CHROMOSOME	POS	REF	ALT
rs1004446	17632545	3481	IGF2	umls:C0011854	GAD	[A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.]	0.214006695	2007	IGF2;IGF2-AS;INS-IGF2	11	2148913	G	A
rs1004446	21829393	3481	IGF2	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.214006695	2011	IGF2;IGF2-AS;INS-IGF2	11	2148913	G	A
rs1004446	17632545	3481	IGF2	umls:C0011854	GWASCAT	A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.	0.214006695	2007	IGF2;IGF2-AS;INS-IGF2	11	2148913	G	A
rs1004446	17632545	51214	IGF2-AS	umls:C0011854	GWASCAT	A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.	0.12	2007	IGF2;IGF2-AS;INS-IGF2	11	2148913	G	A
rs1004446	17632545	723961	INS-IGF2	umls:C0011854	GWASCAT	Type 1 diabetes (T1D) in children results from autoimmune destruction of pancreatic beta cells, leading to insufficient production of insulin.	0.121357209	2007	IGF2;IGF2-AS;INS-IGF2	11	2148913	G	A
rs10137082	21980299	64806	IL25	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002367032	2011	IL25	14	23370824	C	T
rs1015166	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32830954	C	G,T
rs10509540	22891215	3558	IL2	umls:C0011854	BeFree	The alleles that confer susceptibility to type 1 diabetes at interleukin-2 (IL-2), IL2/4q27 (rs2069763) and renalase, FAD-dependent amine oxidase (RNLS)/10q23.31 (rs10509540), were associated with a lower age-at-diagnosis (P = 4.6 × 10⁻⁶ and 2.5 × 10⁻⁵, respectively).	0.026893947	2012	RNLS;LOC101929727	10	88263276	T	C
rs10509540	22891215	55328	RNLS	umls:C0011854	BeFree	The alleles that confer susceptibility to type 1 diabetes at interleukin-2 (IL-2), IL2/4q27 (rs2069763) and renalase, FAD-dependent amine oxidase (RNLS)/10q23.31 (rs10509540), were associated with a lower age-at-diagnosis (P = 4.6 × 10⁻⁶ and 2.5 × 10⁻⁵, respectively).	0.002909916	2012	RNLS;LOC101929727	10	88263276	T	C
rs10509540	19430480	55328	RNLS	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002909916	2009	RNLS;LOC101929727	10	88263276	T	C
rs10517086	24367383	53347	UBASH3A	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.132920927	2013	LOC105374540	4	26083889	G	A
rs10517086	24367383	114904	C1QTNF6	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.12764398	2013	LOC105374540	4	26083889	G	A
rs10517086	19430480	389203	SMIM20	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002367032	2009	LOC105374540	4	26083889	G	A
rs10758593	18840781	169792	GLIS3	umls:C0011854	GAD	[Evaluation of a large number of statistical GWA candidates in several independent cohorts has revealed additional loci that are associated with type 1 diabetes.]	0.247372538	2009	GLIS3	9	4292083	G	A
rs10774671	16014697	4938	OAS1	umls:C0011854	BeFree	Recently, the minor allele of an OAS1 single nucleotide polymorphism (SNP) that alters splicing (rs10774671) was found to be associated with increased enzymatic activity and, in a case-sibling control study, with type 1 diabetes (T1D).	0.126362715	2006	OAS1	12	112919388	G	A
rs10786436	21980299	60495	HPSE2	umls:C0011854	GWASCAT	A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.	0.12	2011	HPSE2	10	98540425	C	T
rs10810632	19875614	54796	BNC2	umls:C0011854	GAD	[A major locus for A1C and glucose in individuals with diabetes is near SORCS1.]	0.002367032	2010	BNC2	9	16789026	C	T
rs10811661	22643932	1029	CDKN2A	umls:C0011854	BeFree	A SNP predisposing to type 2 diabetes mellitus, rs10811661 near CDKN2A/B, is associated with diabetic nephropathy in patients with type 1 diabetes mellitus.	0.002638474	2012	NA	9	22134095	T	C
rs10830963	24906951	6927	HNF1A	umls:C0011854	BeFree	For type 1 diabetes, a strong association was seen for MTNR1B (rs10830963, p = 3.2 × 10(-6)) and HNF1A (rs2650000, p = 0.0012).	0.280662875	2014	MTNR1B	11	92975544	C	G
rs10918706	25448703	919	CD247	umls:C0011854	BeFree	We also demonstrated that rs10918706 in the intron of the CD3z gene was associated with increased risk of T1D (Z score 2.137; p=0.032).	0.000271442	2014	CD247;LOC101928512	1	167496884	C	T
rs11052552	17554300	160365	CLECL1	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.12	2007	LOC105369652	12	9703362	T	G
rs11170466	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	ITGB7	12	53192075	C	T
rs11170466	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	ITGB7	12	53192075	C	T
rs11171739	22144904	389472	RPS26P32	umls:C0011854	BeFree	The locus 12q13 (lead SNP rs11171739), previously identified as a type 1 diabetes locus, was associated with a pattern including two cis eQTLs, RPS26 and SUOX, and 5 trans eQTLs, one of which (MADCAM1) is a potential candidate for mediating T1D susceptibility.	0.001357209	2011	NA	12	56076841	C	T
rs11171739	22144904	8174	MADCAM1	umls:C0011854	BeFree	The locus 12q13 (lead SNP rs11171739), previously identified as a type 1 diabetes locus, was associated with a pattern including two cis eQTLs, RPS26 and SUOX, and 5 trans eQTLs, one of which (MADCAM1) is a potential candidate for mediating T1D susceptibility.	0.000271442	2011	NA	12	56076841	C	T
rs11171739	22144904	6821	SUOX	umls:C0011854	BeFree	The locus 12q13 (lead SNP rs11171739), previously identified as a type 1 diabetes locus, was associated with a pattern including two cis eQTLs, RPS26 and SUOX, and 5 trans eQTLs, one of which (MADCAM1) is a potential candidate for mediating T1D susceptibility.	0.005005506	2011	NA	12	56076841	C	T
rs11203203	19430480	53347	UBASH3A	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.132920927	2009	UBASH3A	21	42416077	G	A
rs11203203	19430480	53347	UBASH3A	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.132920927	2009	UBASH3A	21	42416077	G	A
rs11244	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	HLA-DOB	6	32812947	G	A
rs11258747	19430480	5588	PRKCQ	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.247101096	2009	PRKCQ	10	6430929	G	C,T
rs11258747	19430480	5588	PRKCQ	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.247101096	2009	PRKCQ	10	6430929	G	C,T
rs1131017	23900168	389472	RPS26P32	umls:C0011854	BeFree	We identify one important ribosomal distribution effect, from rs1131017 in the 5'-untranslated region of RPS26, that is in high linkage disequilibrium with the 12q13 locus for susceptibility to type 1 diabetes.	0.001357209	2013	RPS26;LOC105369780	12	56042145	C	G,T
rs1131498	11064106	1950	EGF	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.000542884	2000	SELL	1	169707345	A	G
rs1131498	11064106	3120	HLA-DQB2	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.029587164	2000	SELL	1	169707345	A	G
rs1131498	11064106	6402	SELL	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.083181358	2000	SELL	1	169707345	A	G
rs1131498	11064106	3119	HLA-DQB1	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.249975099	2000	SELL	1	169707345	A	G
rs11327127	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	VIMP	15	101277955	A	-
rs11547328	15298346	1019	CDK4	umls:C0011854	BeFree	Pancreatic islets from cyclin-dependent kinase 4/R24C (Cdk4) knockin mice have significantly increased beta cell mass and are physiologically functional, indicating that Cdk4 is a potential target for pancreatic beta cell mass regeneration in Type 1 diabetes.	0.080542884	2004	CDK4;MARCH9	12	57751648	G	A
rs11568563	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	SLCO1A2	12	21304500	T	G
rs11568563	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	SLCO1A2	12	21304500	T	G
rs11568563	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	SLCO1A2	12	21304500	T	G
rs11568820	22960018	3630	INS	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.370897401	2013	NA	12	47908762	C	T
rs11568820	22960018	2571	GAD1	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.020010754	2013	NA	12	47908762	C	T
rs11594656	23922971	22861	NLRP1	umls:C0011854	BeFree	Three variants were found to be significantly associated with type 1 diabetes (T1D): NLRP1 rs12150220 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01), IL2RA rs11594656 (OR = 0.86, 95% CI = 0.82-0.91, P<0.00001), and CLEC16A rs725613 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01).	0.00554839	2013	NA	10	6080046	T	A
rs11594656	23922971	3559	IL2RA	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.292801815	2013	NA	10	6080046	T	A
rs11594656	23922971	23274	CLEC16A	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.280934317	2013	NA	10	6080046	T	A
rs11755527	18978792	60468	BACH2	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.254745076	2008	BACH2	6	90248512	C	G
rs11755527	19430480	60468	BACH2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.254745076	2009	BACH2	6	90248512	C	G
rs11755527	19430480	60468	BACH2	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.254745076	2009	BACH2	6	90248512	C	G
rs11755527	21829393	60468	BACH2	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.254745076	2011	BACH2	6	90248512	C	G
rs11755527	18978792	60468	BACH2	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.254745076	2008	BACH2	6	90248512	C	G
rs11964650	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	FYN	6	111760735	C	T
rs11964650	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	FYN	6	111760735	C	T
rs11964650	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	FYN	6	111760735	C	T
rs11964650	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	FYN	6	111760735	C	T
rs11964650	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	FYN	6	111760735	C	T
rs11964650	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	FYN	6	111760735	C	T
rs11964650	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	FYN	6	111760735	C	T
rs11964650	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	FYN	6	111760735	C	T
rs121434254	11343230	326	AIRE	umls:C0011854	BeFree	Heterozygous mutations of AIRE were identified in 3 patients: a patient with PBC and a patient with AIH type 1 carried a R257X mutation, and a patient with AIH type 2, diabetes mellitus type 1 (IDDM), thyroid disease, and atrophic gastritis carried a G305S mutation in the first PHD ring finger domain of the AIRE protein.	0.004538567	2001	AIRE	21	44289773	C	A,T
rs12150220	23922971	3559	IL2RA	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.292801815	2013	NLRP1	17	5582047	A	T
rs12150220	23922971	22861	NLRP1	umls:C0011854	BeFree	Three variants were found to be significantly associated with type 1 diabetes (T1D): NLRP1 rs12150220 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01), IL2RA rs11594656 (OR = 0.86, 95% CI = 0.82-0.91, P<0.00001), and CLEC16A rs725613 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01).	0.00554839	2013	NLRP1	17	5582047	A	T
rs12150220	23922971	23274	CLEC16A	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.280934317	2013	NLRP1	17	5582047	A	T
rs12255372	20546291	3898	LAD1	umls:C0011854	BeFree	Two hundred and fifty patients identified as LADA, divided into two subgroups with low (< or = 32 arbitrary units) or high (> 32 units) GADA titre, 620 subjects with Type 2 diabetes [from the Non-Insulin Requiring Autoimmune Diabetes (NIRAD) study cohort of 5330 subjects] in addition to 551 consecutive cases of Type 1 diabetes and 545 normoglycaemic subjects were analysed for the rs12255372 and rs7903146 polymorphisms of the TCF7L2 gene using Taqman.	0.000814326	2010	TCF7L2	10	113049143	G	T
rs12255372	20546291	6934	TCF7L2	umls:C0011854	BeFree	Two hundred and fifty patients identified as LADA, divided into two subgroups with low (< or = 32 arbitrary units) or high (> 32 units) GADA titre, 620 subjects with Type 2 diabetes [from the Non-Insulin Requiring Autoimmune Diabetes (NIRAD) study cohort of 5330 subjects] in addition to 551 consecutive cases of Type 1 diabetes and 545 normoglycaemic subjects were analysed for the rs12255372 and rs7903146 polymorphisms of the TCF7L2 gene using Taqman.	0.003995683	2010	TCF7L2	10	113049143	G	T
rs12444268	19430480	2813	GP2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002367032	2009	NA	16	20331250	T	A
rs1260326	24918535	2646	GCKR	umls:C0011854	BeFree	The study group included 129 children with GCK-MODY from the Polish Registry of Monogenic Diabetes and 395 with type 1 diabetes (T1DM), in whom we genotyped 2 SNPs in G6PC2 (rs560887) and GCKR (rs1260326).	0.000271442	2015	GCKR	2	27508073	T	C
rs1260326	24918535	57818	G6PC2	umls:C0011854	BeFree	The study group included 129 children with GCK-MODY from the Polish Registry of Monogenic Diabetes and 395 with type 1 diabetes (T1DM), in whom we genotyped 2 SNPs in G6PC2 (rs560887) and GCKR (rs1260326).	0.087719925	2015	GCKR	2	27508073	T	C
rs1265564	22293688	23316	CUX2	umls:C0011854	BeFree	The other refined variant is in the CUX2 gene region for association with type 1 diabetes, where the newly identified top SNP rs1265564 has an association P-value of 1.68 × 10(-16).	0.122638474	2012	CUX2	12	111270654	A	C
rs1265564	22293688	23316	CUX2	umls:C0011854	GAD	[The other refined variant is in the CUX2 gene region for association with type 1 diabetes, where the newly identified top SNP rs1265564 has an association P-value of 1.68 A 10(-16).]	0.122638474	2012	CUX2	12	111270654	A	C
rs1265564	22293688	23316	CUX2	umls:C0011854	GWASCAT	The other refined variant is in the CUX2 gene region for association with type 1 diabetes, where the newly identified top SNP rs1265564 has an association P-value of 1.68 × 10(-16).	0.122638474	2012	CUX2	12	111270654	A	C
rs1265758	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32355752	A	G
rs1265759	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32354616	C	T
rs12679857	21980299	10584	COLEC10	umls:C0011854	GWASCAT	A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.	0.12	2011	COLEC10	8	118965098	A	G
rs12679857	21980299	4982	TNFRSF11B	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002638474	2011	COLEC10	8	118965098	A	G
rs12708716	19430480	23274	CLEC16A	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.280934317	2009	CLEC16A	16	11086016	A	G
rs12708716	17554260	23274	CLEC16A	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.280934317	2007	CLEC16A	16	11086016	A	G
rs12708716	21829393	23274	CLEC16A	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.280934317	2011	CLEC16A	16	11086016	A	G
rs12708716	18978792	23274	CLEC16A	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.280934317	2008	CLEC16A	16	11086016	A	G
rs12708716	19430480	23274	CLEC16A	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.280934317	2009	CLEC16A	16	11086016	A	G
rs12708716	17554300	23274	CLEC16A	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.280934317	2007	CLEC16A	16	11086016	A	G
rs1270942	NA	629	CFB	umls:C0011854	GAD	NA	0.011639663	NA	CFB	6	31951083	A	G
rs12722495	21829393	3559	IL2RA	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.292801815	2011	IL2RA	10	6055320	T	C
rs12785878	23979957	1594	CYP27B1	umls:C0011854	BeFree	DHCR7/NADSYN1 rs12785878 and CYP27B1 rs4646536 may play an important role in islet autoimmunity, the preclinical phase of T1D.	0.021573392	2014	NADSYN1	11	71456403	G	T
rs12785878	23979957	55191	NADSYN1	umls:C0011854	BeFree	DHCR7/NADSYN1 rs12785878 and CYP27B1 rs4646536 may play an important role in islet autoimmunity, the preclinical phase of T1D.	0.000271442	2014	NADSYN1	11	71456403	G	T
rs12785878	22130326	1717	DHCR7	umls:C0011854	BeFree	The second SNP, rs12785878, is located near DHCR7 (Chr11), a genetic determinant of vitamin D insufficiency, and showed a size effect in MS similar to that recently observed in Type 1 diabetes (T1D; OR = 1.10; P = 0.009).	0.000542884	2012	NADSYN1	11	71456403	G	T
rs12917258	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	VIMP	15	101273134	C	G
rs1296023	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	CTSB	8	11869308	A	G
rs1296023	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CTSB	8	11869308	A	G
rs1296023	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	CTSB	8	11869308	A	G
rs1296023	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CTSB	8	11869308	A	G
rs1296023	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CTSB	8	11869308	A	G
rs1296023	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	CTSB	8	11869308	A	G
rs1296023	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CTSB	8	11869308	A	G
rs1296023	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CTSB	8	11869308	A	G
rs13266634	21131091	169026	SLC30A8	umls:C0011854	BeFree	To investigate the association of solute carrier family 30 member 8 (SLC30A8) rs13266634 C/T polymorphism with type 2 diabetes (T2DM), impaired glucose tolerance (IGT), and type 1 diabetes (T1DM).	0.024516983	2011	SLC30A8;LOC105375716	8	117172544	C	T
rs13266634	18850084	169026	SLC30A8	umls:C0011854	BeFree	Association between anti-ZnT8 autoantibody specificities and SLC30A8 Arg325Trp variant in Japanese patients with type 1 diabetes.	0.024516983	2008	SLC30A8;LOC105375716	8	117172544	C	T
rs13277113	21765104	640	BLK	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.000271442	2011	NA	8	11491677	G	A
rs13277113	21765104	10666	CD226	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.134278137	2011	NA	8	11491677	G	A
rs13277113	21765104	83648	FAM167A	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.002638474	2011	NA	8	11491677	G	A
rs1358030	19875614	114815	SORCS1	umls:C0011854	GAD	[A major locus for A1C and glucose in individuals with diabetes is near SORCS1.]	0.002367032	2010	NA	10	106363841	G	A
rs1427676	19956106	1493	CTLA4	umls:C0011854	BeFree	Evidence for association with T1D was observed for the IFIH1 SNP, rs1990760 (P=7.0 x 10(-4)), with RR=0.88 (0.82-0.95) and the CTLA4 SNP rs1427676 (P=0.0005), with RR=1.14 (1.06-1.23).	0.247813496	2009	NA	2	203876443	C	T
rs1427676	19956106	64135	IFIH1	umls:C0011854	BeFree	Evidence for association with T1D was observed for the IFIH1 SNP, rs1990760 (P=7.0 x 10(-4)), with RR=0.88 (0.82-0.95) and the CTLA4 SNP rs1427676 (P=0.0005), with RR=1.14 (1.06-1.23).	0.167448922	2009	NA	2	203876443	C	T
rs1445898	18927125	133690	CAPSL	umls:C0011854	BeFree	While no evidence was obtained for four genomic regions (rs2929366/NM_144715 on chromosome 3, rs9127/Q7Z4C4 on chromosome 5, rs1445898/CAPSL on chromosome 5 and rs2302188/NM_033543 on chromosome 19), we provide strong evidence for association between T1D and multiple SNPs in the IFIH1 linkage disequilibrium (LD) block on chromosome 2q.	0.00554839	2009	CAPSL	5	35910427	C	T
rs1445898	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CAPSL	5	35910427	C	T
rs1445898	17554260	133690	CAPSL	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.00554839	2007	CAPSL	5	35910427	C	T
rs1445898	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CAPSL	5	35910427	C	T
rs1445898	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	CAPSL	5	35910427	C	T
rs1465788	19430480	677	ZFP36L1	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.12	2009	ZFP36L1	14	68796882	T	C
rs147582772	15848047	6908	TBP	umls:C0011854	BeFree	G/A1180 dimorphism and two other SNPs, C/T771 TBP and G/T(-271) PDCD2, were shown to share three common haplotypes, two of which (A-T-G and A-T-T) have been associated with higher development risk of T1D.	0.003181358	2005	TBP	6	170569765	C	T
rs1544410	22960018	2571	GAD1	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.020010754	2013	VDR;LOC105369749	12	47846052	C	T
rs1544410	22960018	3630	INS	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.370897401	2013	VDR;LOC105369749	12	47846052	C	T
rs1549758	15890549	4846	NOS3	umls:C0011854	BeFree	Recently, we reported a strong association between the eNOS4b/a endothelial nitric oxide synthase (eNOS) polymorphism and severe DR. To examine whether T-786C and C774T eNOS polymorphisms are involved in severe DR, 254 Caucasians with longstanding C-peptide-negative type 1 diabetes, 128 patients with absent/mild DR (control group), and 126 patients with preproliferative/proliferative DR (study group) were genotyped.	0.139555084	2005	NOS3	7	150998638	T	C
rs1557150	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	LOC105376486	10	32889379	T	C
rs1557150	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC105376486	10	32889379	T	C
rs1561570	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	OPTN	10	13113726	T	C
rs1561570	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	OPTN	10	13113726	T	C
rs1561570	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	OPTN	10	13113726	T	C
rs1567438	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160458599	T	C
rs1567438	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160458599	T	C
rs1678536	19956108	2065	ERBB3	umls:C0011854	BeFree	Support was obtained for a newly identified T1D candidate locus on chromosome 12q13.3-12q14.1 (rs1678536/KIF5A: P=8.1 x 10(-3); relative risk (RR) for minor allele=0.89, 95% CI=0.82-0.97), which has a separate association from the previously reported T1D candidate locus ERBB3/12q13.2-q13.3.	0.160315489	2009	NA	12	57585407	C	G
rs1678536	19956108	3798	KIF5A	umls:C0011854	BeFree	Support was obtained for a newly identified T1D candidate locus on chromosome 12q13.3-12q14.1 (rs1678536/KIF5A: P=8.1 x 10(-3); relative risk (RR) for minor allele=0.89, 95% CI=0.82-0.97), which has a separate association from the previously reported T1D candidate locus ERBB3/12q13.2-q13.3.	0.002909916	2009	NA	12	57585407	C	G
rs16956936	19430480	146754	DNAH2	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	DNAH2	17	7730374	C	T
rs16956936	19430480	146754	DNAH2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.122367032	2009	DNAH2	17	7730374	C	T
rs1701704	18198356	1017	CDK2	umls:C0011854	GAD	[We have discovered a type 1 diabetes locus at 12q13 that is replicated in an independent cohort of type 1 diabetic patients and confers a type 1 diabetes risk comparable with that of the 16p13 locus we recently reported.]	0.002367032	2008	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	18198356	2065	ERBB3	umls:C0011854	GAD	[We have discovered a type 1 diabetes locus at 12q13 that is replicated in an independent cohort of type 1 diabetic patients and confers a type 1 diabetes risk comparable with that of the 16p13 locus we recently reported.]	0.160315489	2008	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	21829393	6821	SUOX	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.005005506	2011	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	18198356	64375	IKZF4	umls:C0011854	GAD	[We have discovered a type 1 diabetes locus at 12q13 that is replicated in an independent cohort of type 1 diabetic patients and confers a type 1 diabetes risk comparable with that of the 16p13 locus we recently reported.]	0.122638474	2008	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	18198356	6821	SUOX	umls:C0011854	GAD	[We have discovered a type 1 diabetes locus at 12q13 that is replicated in an independent cohort of type 1 diabetic patients and confers a type 1 diabetes risk comparable with that of the 16p13 locus we recently reported.]	0.005005506	2008	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	18198356	64375	IKZF4	umls:C0011854	GWASCAT	A novel susceptibility locus for type 1 diabetes on Chr12q13 identified by a genome-wide association study.	0.122638474	2008	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	IKZF4;LOC105369781	12	56018703	T	G
rs1701704	18198356	5869	RAB5B	umls:C0011854	GAD	[We have discovered a type 1 diabetes locus at 12q13 that is replicated in an independent cohort of type 1 diabetic patients and confers a type 1 diabetes risk comparable with that of the 16p13 locus we recently reported.]	0.002367032	2008	IKZF4;LOC105369781	12	56018703	T	G
rs17166496	17554300	23105	FSTL4	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.002367032	2007	FSTL4	5	133293192	G	C
rs17388568	21829393	132612	ADAD1	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.007101096	2011	ADAD1	4	122408207	G	A
rs17388568	17554300	132612	ADAD1	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.007101096	2007	ADAD1	4	122408207	G	A
rs17696736	17554300	80018	NAA25	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.130011012	2007	NAA25	12	112049014	A	G
rs17696736	17554300	5770	PTPN1	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.002367032	2007	NAA25	12	112049014	A	G
rs17696736	18978792	80018	NAA25	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.130011012	2008	NAA25	12	112049014	A	G
rs17696736	18978792	80018	NAA25	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.130011012	2008	NAA25	12	112049014	A	G
rs17696736	17554300	10019	SH2B3	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.257654991	2007	NAA25	12	112049014	A	G
rs17696736	17554300	80018	NAA25	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.130011012	2007	NAA25	12	112049014	A	G
rs17696736	17554300	10906	TRAFD1	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.002367032	2007	NAA25	12	112049014	A	G
rs17696736	17554260	80018	NAA25	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.130011012	2007	NAA25	12	112049014	A	G
rs17696736	17554260	80018	NAA25	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.130011012	2007	NAA25	12	112049014	A	G
rs17759555	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	45340629	C	A
rs17759555	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	45340629	C	A
rs17759555	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	45340629	C	A
rs17759555	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	NA	17	45340629	C	A
rs17759555	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	17	45340629	C	A
rs17759555	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	45340629	C	A
rs17759555	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	17	45340629	C	A
rs17759555	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	45340629	C	A
rs17879469	9690057	3123	HLA-DRB1	umls:C0011854	BeFree	Our data indicate that CTLA-4 exon 1 position 49 A/G dimorphism was significantly associated with predisposition to IDDM in our Central Poland population, particularly in patients lacking the strongly predisposing DRB1 alleles.	0.275239056	1998	HLA-DRB1;LOC105369230	6	32584333	C	G
rs1800477	11704806	596	BCL2	umls:C0011854	BeFree	In contrast to what was observed in Japanese diabetic/control individuals, we find no evidence for association of the BCL2 Ala43Thr polymorphism to T1DM in Danish, Finnish and Basque Type 1 diabetes families.	0.003452799	2001	BCL2	18	63318540	C	T
rs1800562	23801727	3077	HFE	umls:C0011854	BeFree	Increased transferrin saturation and HFE genotype C282Y/C282Y predict total mortality in patients with late-onset type 1 diabetes, and increased transferrin saturation after diagnosis is an independent risk factor.	0.000271442	2014	HFE	6	26092913	G	A
rs1800566	10447260	1429	CRYZ	umls:C0011854	BeFree	No linkage of P187S polymorphism in NAD(P)H: quinone oxidoreductase (NQO1/DIA4) and type 1 diabetes in the Danish population. DIEGG and DSGD. Danish IDDM Epidemiology and Genetics Group and The Danish Study Group of Diabetes in Childhood.	0.000271442	1999	NQO1	16	69711242	G	A
rs1800566	10447260	3630	INS	umls:C0011854	BeFree	No linkage of P187S polymorphism in NAD(P)H: quinone oxidoreductase (NQO1/DIA4) and type 1 diabetes in the Danish population. DIEGG and DSGD. Danish IDDM Epidemiology and Genetics Group and The Danish Study Group of Diabetes in Childhood.	0.370897401	1999	NQO1	16	69711242	G	A
rs1800566	10447260	1728	NQO1	umls:C0011854	BeFree	No linkage of P187S polymorphism in NAD(P)H: quinone oxidoreductase (NQO1/DIA4) and type 1 diabetes in the Danish population. DIEGG and DSGD. Danish IDDM Epidemiology and Genetics Group and The Danish Study Group of Diabetes in Childhood.	0.002638474	1999	NQO1	16	69711242	G	A
rs1800783	20962522	342977	NANOS3	umls:C0011854	BeFree	The A allele of rs1800783 is a significant risk factor for nephropathy in individuals with type 1 diabetes, and further comprehensive studies are warranted to confirm the definitive functional variant in the NOS3 gene.	0.001085767	2010	NOS3	7	150992309	A	C,T
rs1801208	10679252	7466	WFS1	umls:C0011854	BeFree	Missense variations of the gene responsible for Wolfram syndrome (WFS1/wolframin) in Japanese: possible contribution of the Arg456His mutation to type 1 diabetes as a nonautoimmune genetic basis.	0.004538567	2000	WFS1	4	6301162	G	A,C,T
rs1801262	10633878	4760	NEUROD1	umls:C0011854	BeFree	Absence of replication in the French population of the association between beta 2/NEUROD-A45T polymorphism and type 1 diabetes.	0.034471913	1999	NEUROD1	2	181678728	T	C
rs1801262	12951629	4760	NEUROD1	umls:C0011854	BeFree	The Ala45Thr polymorphism of BETA2/NeuroD1 gene and susceptibility to type 1 diabetes mellitus in caucasians.	0.034471913	2003	NEUROD1	2	181678728	T	C
rs1801262	15047635	4760	NEUROD1	umls:C0011854	BeFree	Lack of association of the Ala(45)Thr polymorphism and other common variants of the NeuroD gene with type 1 diabetes.	0.034471913	2004	NEUROD1	2	181678728	T	C
rs1801262	14694850	3172	HNF4A	umls:C0011854	BeFree	On the other hand we confirmed that the Ala45Thr variant in NeuroD1/BETA2 may represent a susceptibility gene for type 1 diabetes but none of these genes revealed any MODY-specific mutations.	0.01062984	2003	NEUROD1	2	181678728	T	C
rs1801262	10808064	4760	NEUROD1	umls:C0011854	BeFree	Lack of association of the Ala45Thr variant in the BETA2/NEUROD1 with type 1 diabetes in Japanese.	0.034471913	2000	NEUROD1	2	181678728	T	C
rs1801262	14694850	4760	NEUROD1	umls:C0011854	BeFree	On the other hand we confirmed that the Ala45Thr variant in NeuroD1/BETA2 may represent a susceptibility gene for type 1 diabetes but none of these genes revealed any MODY-specific mutations.	0.034471913	2003	NEUROD1	2	181678728	T	C
rs1801262	16357810	4760	NEUROD1	umls:C0011854	BeFree	The Ala45Thr polymorphism of NEUROD1 is associated with type 1 diabetes in Brazilian women.	0.034471913	2005	NEUROD1	2	181678728	T	C
rs1801262	15592940	4760	NEUROD1	umls:C0011854	BeFree	A meta-analysis assessed whether the Ala45Thr polymorphism of the neurogenic differentiation 1 (NEUROD1) gene is associated with increased risk of diabetes mellitus type 1 (T1D) or type 2 (T2D).	0.034471913	2005	NEUROD1	2	181678728	T	C
rs1801262	12639765	4760	NEUROD1	umls:C0011854	BeFree	NEUROD polymorphism Ala45Thr is associated with Type 1 diabetes mellitus in Czech children.	0.034471913	2003	NEUROD1	2	181678728	T	C
rs1801262	10334323	4760	NEUROD1	umls:C0011854	BeFree	Because the variant of the NeuroD/BETA2 gene (Ala45Thr) is associated with type 1 but not type 2 diabetes, it may be implicated in the loss of pancreatic beta-cells in type 1 diabetes.	0.034471913	1999	NEUROD1	2	181678728	T	C
rs1801274	20148910	2209	FCGR1A	umls:C0011854	BeFree	The Fc Gamma Receptor IIa (FcGRIIa) molecule is involved in the clearance of autoantibodies and a functional single nucleotide polymorphism (SNP), rs1801274, which has been shown to alter autoantibody clearance, has been associated with a number of autoimmune diseases (AIDs) including systemic lupus erythematosus and type 1 diabetes.	0.000542884	2010	FCGR2A	1	161509955	A	G
rs1801278	14988278	3667	IRS1	umls:C0011854	BeFree	We were unable to confirm a recently published association of the IRS1 Gly972Arg variant with type 1 diabetes.	0.008186863	2004	IRS1	2	226795828	C	T,G,A
rs1801282	18211635	3630	INS	umls:C0011854	BeFree	We aimed to estimate the association between the common Pro12Ala polymorphism of PPARG2 and risk of type 1 diabetes, and to test whether there is gene-environment interaction with use of cod liver oil in the first year of life or gene-gene interaction with the established insulin gene (INS) and human leukocyte antigen DQ (HLA-DQ) genetic susceptibility loci.	0.370897401	2008	PPARG	3	12351626	C	G
rs1805192	18211635	3630	INS	umls:C0011854	BeFree	We aimed to estimate the association between the common Pro12Ala polymorphism of PPARG2 and risk of type 1 diabetes, and to test whether there is gene-environment interaction with use of cod liver oil in the first year of life or gene-gene interaction with the established insulin gene (INS) and human leukocyte antigen DQ (HLA-DQ) genetic susceptibility loci.	0.370897401	2008	PPARG	3	12379739	C	G
rs1893217	22960018	3630	INS	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.370897401	2013	PTPN2	18	12809341	A	G
rs1893217	19430480	5771	PTPN2	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.136916611	2009	PTPN2	18	12809341	A	G
rs1893217	22960018	2571	GAD1	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.020010754	2013	PTPN2	18	12809341	A	G
rs1893217	19430480	5771	PTPN2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.136916611	2009	PTPN2	18	12809341	A	G
rs1894406	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	NA	6	32819279	C	T
rs1980493	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	BTNL2;LOC101929163	6	32395438	T	C
rs1983853	18840781	23566	LPAR3	umls:C0011854	GAD	[Evaluation of a large number of statistical GWA candidates in several independent cohorts has revealed additional loci that are associated with type 1 diabetes.]	0.002367032	2009	LPAR3	1	84845509	C	T
rs1990760	19956106	64135	IFIH1	umls:C0011854	BeFree	Evidence for association with T1D was observed for the IFIH1 SNP, rs1990760 (P=7.0 x 10(-4)), with RR=0.88 (0.82-0.95) and the CTLA4 SNP rs1427676 (P=0.0005), with RR=1.14 (1.06-1.23).	0.167448922	2009	IFIH1	2	162267541	C	T
rs1990760	17554260	64135	IFIH1	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.167448922	2007	IFIH1	2	162267541	C	T
rs1990760	22053898	64135	IFIH1	umls:C0011854	BeFree	In conclusion, IFIH1 rs3747517, but not rs1990760 polymorphism, plays an important role in type 1 diabetes risk in Chinese Han population.	0.167448922	2012	IFIH1	2	162267541	C	T
rs1990760	20644636	64135	IFIH1	umls:C0011854	BeFree	Moreover, the association of the Thr946Ala SNP with T1D is not due to modulation of IFIH1 expression in organs involved in the disease, pointing to the IFIH1 nsSNP as the causal variant.	0.167448922	2010	IFIH1	2	162267541	C	T
rs1990760	24386202	64135	IFIH1	umls:C0011854	BeFree	The rs1990760 polymorphism of interferon induced with helicase C domain 1 (IFIH1) has been associated with type 1 diabetes mellitus (T1DM).	0.167448922	2013	IFIH1	2	162267541	C	T
rs1990760	19961590	64135	IFIH1	umls:C0011854	BeFree	Recent studies showed that a genetic variation within the interferon induced helicase domain 1 (IFIH1) locus (rs1990760 polymorphism) is an additional risk factor in type 1 diabetes and Graves' disease (GD).	0.167448922	2009	IFIH1	2	162267541	C	T
rs1990760	23144876	64135	IFIH1	umls:C0011854	BeFree	Enterovirus RNA in peripheral blood may be associated with the variants of rs1990760, a common type 1 diabetes associated polymorphism in IFIH1.	0.167448922	2012	IFIH1	2	162267541	C	T
rs1990760	17442111	64135	IFIH1	umls:C0011854	BeFree	The aim of the present study was to investigate the role of the interferon induced with helicase domain 1 (IFIH1) A946T (rs1990760 A>G) variant in rheumatoid arthritis (RA), as this was recently associated with susceptibility to type 1 diabetes.	0.167448922	2007	IFIH1	2	162267541	C	T
rs1990760	24117221	64135	IFIH1	umls:C0011854	BeFree	Functional characterization of the Thr946Ala SNP at the type 1 diabetes IFIH1 locus.	0.167448922	2014	IFIH1	2	162267541	C	T
rs1990760	19430480	64135	IFIH1	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.167448922	2009	IFIH1	2	162267541	C	T
rs1990760	19841890	64135	IFIH1	umls:C0011854	BeFree	The interferon-induced helicase IFIH1 Ala946Thr polymorphism is associated with type 1 diabetes in both the high-incidence Finnish and the medium-incidence Hungarian populations.	0.167448922	2010	IFIH1	2	162267541	C	T
rs1990760	17535987	64135	IFIH1	umls:C0011854	BeFree	A recent large-scale analysis of nonsynonymous coding polymorphisms showed strong evidence that an alanine to threonine amino acid change at codon 946 of the interferon-induced helicase (IFIH1) gene (SNP ID rs1990760) was associated with type 1 diabetes.	0.167448922	2007	IFIH1	2	162267541	C	T
rs1990760	21829393	64135	IFIH1	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.167448922	2011	IFIH1	2	162267541	C	T
rs1990760	19956106	1493	CTLA4	umls:C0011854	BeFree	Evidence for association with T1D was observed for the IFIH1 SNP, rs1990760 (P=7.0 x 10(-4)), with RR=0.88 (0.82-0.95) and the CTLA4 SNP rs1427676 (P=0.0005), with RR=1.14 (1.06-1.23).	0.247813496	2009	IFIH1	2	162267541	C	T
rs1990760	23734776	64135	IFIH1	umls:C0011854	BeFree	This meta-analysis demonstrates that the IFIH1 rs1990760 T-allele confers susceptibility to T1D, SLE, MS and RA and suggests that the IFIH1 rs1990760 polymorphism might have no effect on GD and AAD.	0.167448922	2014	IFIH1	2	162267541	C	T
rs1990760	20694011	64135	IFIH1	umls:C0011854	BeFree	In addition to the known association of HLA with IgAD, we identified association with a nonsynonymous variant in IFIH1 (rs1990760G>A, P = 7.3 x 10(-10)) which was previously associated with type 1 diabetes and systemic lupus erythematosus.	0.167448922	2010	IFIH1	2	162267541	C	T
rs2048327	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160442500	T	C
rs2048327	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160442500	T	C
rs2069762	21829393	3558	IL2	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.026893947	2011	IL2	4	122456825	A	C
rs2069763	22891215	3558	IL2	umls:C0011854	BeFree	The alleles that confer susceptibility to type 1 diabetes at interleukin-2 (IL-2), IL2/4q27 (rs2069763) and renalase, FAD-dependent amine oxidase (RNLS)/10q23.31 (rs10509540), were associated with a lower age-at-diagnosis (P = 4.6 × 10⁻⁶ and 2.5 × 10⁻⁵, respectively).	0.026893947	2012	IL2	4	122456327	C	A
rs2069763	22891215	55328	RNLS	umls:C0011854	BeFree	The alleles that confer susceptibility to type 1 diabetes at interleukin-2 (IL-2), IL2/4q27 (rs2069763) and renalase, FAD-dependent amine oxidase (RNLS)/10q23.31 (rs10509540), were associated with a lower age-at-diagnosis (P = 4.6 × 10⁻⁶ and 2.5 × 10⁻⁵, respectively).	0.002909916	2012	IL2	4	122456327	C	A
rs2070600	10553500	129831	RBM45	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.045059351	1999	AGER	6	32183666	C	T
rs2070600	10553500	3123	HLA-DRB1	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.275239056	1999	AGER	6	32183666	C	T
rs2070600	10553500	177	AGER	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.008458305	1999	AGER	6	32183666	C	T
rs2071469	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	HLA-DOB	6	32817006	C	T
rs2071472	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	HLA-DOB	6	32816843	C	T
rs2071474	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	HLA-DOB	6	32814805	C	T
rs2071540	NA	6890	TAP1	umls:C0011854	GAD	NA	0.023007884	NA	PSMB8;TAP1;PSMB8-AS1	6	32845139	T	C
rs2071540	NA	5696	PSMB8	umls:C0011854	GAD	NA	0.015016517	NA	PSMB8;TAP1;PSMB8-AS1	6	32845139	T	C
rs2071554	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	HLA-DOB	6	32816899	C	T
rs2101171	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	NA	15	101267710	T	C
rs2104286	25964488	3559	IL2RA	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.292801815	2015	IL2RA	10	6057082	T	C
rs2104286	25964488	3630	INS	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.370897401	2015	IL2RA	10	6057082	T	C
rs2104286	25964488	55340	GIMAP5	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.084267125	2015	IL2RA	10	6057082	T	C
rs2104286	25964488	55303	GIMAP4	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.000271442	2015	IL2RA	10	6057082	T	C
rs2227956	NA	3305	HSPA1L	umls:C0011854	GAD	NA	0.007372538	NA	HSPA1L	6	31810495	G	A
rs2228570	23209686	176	ACAN	umls:C0011854	BeFree	A total of 9, 5, 3, and 7 studies were finally included in the analyses for the associations between the VDR TaqI (rs731236), FokI (rs2228570), ApaI (rs7975232), or aggrecan VNTR polymorphisms and the risk of IDD, respectively.	0.001357209	2012	VDR	12	47879112	A	T,G,C
rs2228570	22960018	2571	GAD1	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.020010754	2013	VDR	12	47879112	A	T,G,C
rs2228570	22960018	3630	INS	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.370897401	2013	VDR	12	47879112	A	T,G,C
rs2233578	15509590	5078	PAX4	umls:C0011854	UNIPROT	PAX4 gene variations predispose to ketosis-prone diabetes.	0.251368221	2004	PAX4	7	127614497	G	A
rs2243250	24628947	3565	IL4	umls:C0011854	BeFree	However, we failed to reveal any association between IL-4 rs2243250 polymorphism and systemic lupus erythematosus (SLE), type 1 diabetes (T1D) or Graves' disease (GD).	0.101998061	2014	IL4	5	132673462	C	T
rs2269241	19430480	5236	PGM1	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.12764398	2009	PGM1	1	63643100	T	C
rs2269241	19430480	5236	PGM1	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.12764398	2009	PGM1	1	63643100	T	C
rs2281808	19430480	55423	SIRPG	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	SIRPG	20	1629905	T	C
rs2281808	19430480	55423	SIRPG	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.122367032	2009	SIRPG	20	1629905	T	C
rs2286899	25964488	3559	IL2RA	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.292801815	2015	GIMAP5;GIMAP1-GIMAP5	7	150743626	A	G
rs2286899	25964488	55303	GIMAP4	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.000271442	2015	GIMAP5;GIMAP1-GIMAP5	7	150743626	A	G
rs2286899	25964488	55340	GIMAP5	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.084267125	2015	GIMAP5;GIMAP1-GIMAP5	7	150743626	A	G
rs2286899	25964488	3630	INS	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.370897401	2015	GIMAP5;GIMAP1-GIMAP5	7	150743626	A	G
rs2290400	19430480	94103	ORMDL3	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002638474	2009	GSDMB	17	39909987	T	C
rs2290400	19430480	55876	GSDMB	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.125005506	2009	GSDMB	17	39909987	T	C
rs2290400	19430480	55876	GSDMB	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.125005506	2009	GSDMB	17	39909987	T	C
rs2292239	18978792	2065	ERBB3	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.160315489	2008	ERBB3	12	56088396	T	G
rs2292239	18940880	2065	ERBB3	umls:C0011854	GAD	[Furthermore, a joint analysis, with the INS and CTLA4 SNPs, revealed that CTLA4 rs3087243, ERBB3 rs2292399, and CLEC16A rs2903692, but not INS rs689, were significant risk factors for the cooccurrence of AITD in Japanese T1D.]	0.160315489	2009	ERBB3	12	56088396	T	G
rs2292239	21829393	2065	ERBB3	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.160315489	2011	ERBB3	12	56088396	T	G
rs2292239	17554260	2065	ERBB3	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.160315489	2007	ERBB3	12	56088396	T	G
rs2292239	19430480	2065	ERBB3	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.160315489	2009	ERBB3	12	56088396	T	G
rs229541	24367383	53347	UBASH3A	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.132920927	2013	C1QTNF6	22	37195278	G	A
rs229541	19430480	114904	C1QTNF6	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.12764398	2009	C1QTNF6	22	37195278	G	A
rs229541	24367383	114904	C1QTNF6	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.12764398	2013	C1QTNF6	22	37195278	G	A
rs229541	18978792	114904	C1QTNF6	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.12764398	2008	C1QTNF6	22	37195278	G	A
rs2296336	16960798	3710	ITPR3	umls:C0011854	GAD	[Two-locus regression analysis supports an influence of ITPR3 variation on T1D that is distinct from that of any MHC class II gene.]	0.12554839	2006	ITPR3	6	33668883	C	G
rs2302188	18927125	133690	CAPSL	umls:C0011854	BeFree	While no evidence was obtained for four genomic regions (rs2929366/NM_144715 on chromosome 3, rs9127/Q7Z4C4 on chromosome 5, rs1445898/CAPSL on chromosome 5 and rs2302188/NM_033543 on chromosome 19), we provide strong evidence for association between T1D and multiple SNPs in the IFIH1 linkage disequilibrium (LD) block on chromosome 2q.	0.00554839	2009	CEACAM21	19	41579520	G	A
rs2304256	21829393	7297	TYK2	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.125005506	2011	TYK2	19	10364976	C	A
rs2304256	19966805	7297	TYK2	umls:C0011854	GAD	[The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.]	0.125005506	2010	TYK2	19	10364976	C	A
rs2304256	19966805	7297	TYK2	umls:C0011854	GWASCAT	The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.	0.125005506	2010	TYK2	19	10364976	C	A
rs231775	12047362	1493	CTLA4	umls:C0011854	BeFree	CTLA-4 49 A/G dimorphism and type 1 diabetes susceptibility: a French case-control study and segregation analysis. Evidence of a maternal effect.	0.247813496	2002	CTLA4	2	203867991	A	G,T
rs231775	12610047	1493	CTLA4	umls:C0011854	BeFree	Association of the CTLA-4 gene 49 A/G polymorphism with type 1 diabetes and autoimmune thyroid disease in Japanese children.	0.247813496	2003	CTLA4	2	203867991	A	G,T
rs231775	24517008	1493	CTLA4	umls:C0011854	BeFree	Association of CTLA-4 gene 49A/G polymorphism with the incidence of type 1 diabetes mellitus in the Iranian Kurdish population.	0.247813496	2014	CTLA4	2	203867991	A	G,T
rs231775	14709415	1493	CTLA4	umls:C0011854	BeFree	Association between IL-18 gene promoter polymorphisms and CTLA-4 gene 49A/G polymorphism in Japanese patients with type 1 diabetes.	0.247813496	2004	CTLA4	2	203867991	A	G,T
rs231775	19188433	1493	CTLA4	umls:C0011854	BeFree	The influence of polymorphisms of INS(-23Hph1), CTLA-4(T17A), and PTPN22(R620W) on development of persistent islet autoimmunity and progression to type 1 diabetes was evaluated by parametric models and by survival analyses.	0.247813496	2009	CTLA4	2	203867991	A	G,T
rs231775	19815302	26191	PTPN22	umls:C0011854	BeFree	Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in Croatians.	0.474764423	2009	CTLA4	2	203867991	A	G,T
rs231775	14709415	3606	IL18	umls:C0011854	BeFree	Association between IL-18 gene promoter polymorphisms and CTLA-4 gene 49A/G polymorphism in Japanese patients with type 1 diabetes.	0.02507973	2004	CTLA4	2	203867991	A	G,T
rs231775	19188433	3630	INS	umls:C0011854	BeFree	The influence of polymorphisms of INS(-23Hph1), CTLA-4(T17A), and PTPN22(R620W) on development of persistent islet autoimmunity and progression to type 1 diabetes was evaluated by parametric models and by survival analyses.	0.370897401	2009	CTLA4	2	203867991	A	G,T
rs231775	23261825	1493	CTLA4	umls:C0011854	BeFree	This meta-analysis demonstrated that the G allele of rs231775 of CTLA-4 is a risk factor associated with increased T1D susceptibility.	0.247813496	2013	CTLA4	2	203867991	A	G,T
rs231775	19815302	1493	CTLA4	umls:C0011854	BeFree	Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in Croatians.	0.247813496	2009	CTLA4	2	203867991	A	G,T
rs231775	9690057	3123	HLA-DRB1	umls:C0011854	BeFree	Our data indicate that CTLA-4 exon 1 position 49 A/G dimorphism was significantly associated with predisposition to IDDM in our Central Poland population, particularly in patients lacking the strongly predisposing DRB1 alleles.	0.275239056	1998	CTLA4	2	203867991	A	G,T
rs231775	24465825	1493	CTLA4	umls:C0011854	BeFree	This meta-analysis demonstrated that the G49A and C60T polymorphism of CTLA4 is a risk factor associated with increased T1D susceptibility, but these associations vary in different ethnic populations.	0.247813496	2013	CTLA4	2	203867991	A	G,T
rs237025	17554341	387082	SUMO4	umls:C0011854	BeFree	SUMO4 M55V polymorphism affects susceptibility to type I diabetes in HLA DR3- and DR4-positive Swedish patients.	0.030346746	2007	TAB2;SUMO4	6	149400554	G	A
rs237025	22936652	387082	SUMO4	umls:C0011854	BeFree	Our study demonstrates significant associations of SUMO4 M55V polymorphism with T1DM in Asian and Caucasian population and with T2DM in Asian population.	0.030346746	2012	TAB2;SUMO4	6	149400554	G	A
rs237025	21158221	387082	SUMO4	umls:C0011854	BeFree	Association of SUMO4 M55V polymorphism with type 1 diabetes in Chinese children.	0.030346746	2010	TAB2;SUMO4	6	149400554	G	A
rs237025	17373940	387082	SUMO4	umls:C0011854	BeFree	Asian-Indians show more similarity to Caucasians with respect to the association of SUMO4 M55V variant in T1DM.	0.030346746	2007	TAB2;SUMO4	6	149400554	G	A
rs237025	22884980	387082	SUMO4	umls:C0011854	BeFree	Association between the SUMO4 M55V (A163G) polymorphism and susceptibility to type 1 diabetes: a meta-analysis.	0.030346746	2012	TAB2;SUMO4	6	149400554	G	A
rs237025	17448564	387082	SUMO4	umls:C0011854	BeFree	Studies on IDDM5 have led to the discovery of a novel polymorphism 163 A-->G (M55V) in SUMO4 gene, which was found to be associated with T1D patients with Asian origin.	0.030346746	2007	TAB2;SUMO4	6	149400554	G	A
rs237025	17130532	387082	SUMO4	umls:C0011854	BeFree	M55V variant of SUMO4 was significantly associated with type 1 diabetes in Asians, but genetic heterogeneity between Asian and Caucasian populations was suggested.	0.030346746	2006	TAB2;SUMO4	6	149400554	G	A
rs237025	19410319	387082	SUMO4	umls:C0011854	BeFree	The Met55Val polymorphism in the small ubiquitin-like modifier 4 (SUMO4) gene has been associated with susceptibility not only to type 1 diabetes, but also to type 2 diabetes and diabetic nephropathy.	0.030346746	2009	TAB2;SUMO4	6	149400554	G	A
rs237025	17926234	387082	SUMO4	umls:C0011854	BeFree	A M55V polymorphism in the SUMO4 gene is associated with a reduced prevalence of diabetic retinopathy in patients with Type 1 diabetes.	0.030346746	2008	TAB2;SUMO4	6	149400554	G	A
rs237025	22423385	4792	NFKBIA	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.003181358	2012	TAB2;SUMO4	6	149400554	G	A
rs237025	22069273	4792	NFKBIA	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.003181358	2011	TAB2;SUMO4	6	149400554	G	A
rs237025	15730420	387082	SUMO4	umls:C0011854	BeFree	The SUMO4 codon 55 methionine to valine polymorphism may be exclusively associated with susceptibility to T1D, or the effect of the locus in GD and Addison's disease may be much less than that found in T1D patients.	0.030346746	2005	TAB2;SUMO4	6	149400554	G	A
rs237025	22423385	4790	NFKB1	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.009001189	2012	TAB2;SUMO4	6	149400554	G	A
rs237025	16306380	387082	SUMO4	umls:C0011854	BeFree	Genetic heterogeneity in association of the SUMO4 M55V variant with susceptibility to type 1 diabetes.	0.030346746	2005	TAB2;SUMO4	6	149400554	G	A
rs237025	22423385	387082	SUMO4	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.030346746	2012	TAB2;SUMO4	6	149400554	G	A
rs237025	22069273	4790	NFKB1	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.009001189	2011	TAB2;SUMO4	6	149400554	G	A
rs237025	15123604	387082	SUMO4	umls:C0011854	BeFree	A M55V polymorphism in a novel SUMO gene (SUMO-4) differentially activates heat shock transcription factors and is associated with susceptibility to type I diabetes mellitus.	0.030346746	2004	TAB2;SUMO4	6	149400554	G	A
rs237025	22069273	387082	SUMO4	umls:C0011854	BeFree	The M55V substitution of SUMO4 may affect its ability to modify IκBα by sumoylation, and so lead to activation of NFκB and transcription of genes implicated in the development of type 1 diabetes.	0.030346746	2011	TAB2;SUMO4	6	149400554	G	A
rs2395150	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32358268	G	A
rs2395173	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	NA	6	32437082	A	G
rs241424	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32837157	G	A
rs241425	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32837132	A	G
rs241427	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32836637	A	G
rs241440	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32829584	C	T
rs241447	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32828974	T	C
rs241448	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32828908	A	G
rs241452	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32828569	T	C
rs241453	NA	6891	TAP2	umls:C0011854	GAD	NA	0.026732125	NA	TAP2	6	32828449	G	A
rs242557	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	MAPT	17	45942346	G	A
rs242557	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	MAPT	17	45942346	G	A
rs242557	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	MAPT	17	45942346	G	A
rs2457576	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160444587	G	C
rs2457576	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160444587	G	C
rs2476601	22069277	52	ACP1	umls:C0011854	BeFree	Considerable amount of evidences in the Caucasians have suggested the association of a missense single-nucleotide polymorphism (SNP) in the protein tyrosine phosphatase non-receptor type 22 (PTPN22) gene (rs2476601) with several autoimmune diseases including autoimmune thyroid diseases (AITD) and type 1 diabetes (T1D).	0.031422582	2011	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23359562	26191	PTPN22	umls:C0011854	BeFree	The protein tyrosine phosphatase LYP, a key regulator of TCR signaling, presents a single nucleotide polymorphism, C1858T, associated with several autoimmune diseases such as type I diabetes, rheumatoid arthritis, and lupus.	0.474764423	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	21429197	26191	PTPN22	umls:C0011854	BeFree	The PTPN22 C1858T gene variant is associated with proinsulin in new-onset type 1 diabetes.	0.474764423	2011	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	16464986	26191	PTPN22	umls:C0011854	BeFree	The minor allele of the R620W missense single-nucleotide polymorphism (SNP; rs2476601) in the PTPN22 (protein tyrosine phosphatase non-receptor 22) gene has been reported to be associated with multiple autoimmune diseases, including type 1 diabetes, systemic lupus erythematosus, rheumatoid arthritis, juvenile idiopathic arthritis, autoimmune thyroiditis and vitiligo.	0.474764423	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	18179648	26191	PTPN22	umls:C0011854	BeFree	Association between PTPN22 C1858T and type 1 diabetes: a replication in continental Italy.	0.474764423	2008	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17632545	26191	PTPN22	umls:C0011854	GWASCAT	A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17452059	26191	PTPN22	umls:C0011854	BeFree	A variant (R620W) of PTPN22 was associated with type 1 diabetes and other autoimmune diseases in Caucasians, but the variant was absent in Asians.	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19956096	440603	BCL2L15	umls:C0011854	BeFree	When considering rs2476601 'C' founder chromosomes, a second haplotype (AGGGGC) centromeric of PTPN22 in the C1orf178 region was associated with protection from T1D (odds ratio=0.81, P=0.0005).	0.000271442	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	25256132	3119	HLA-DQB1	umls:C0011854	BeFree	One hundred and one children with type 1 diabetes and 160 healthy controls from the same region were studied for HLA-DQB1, HLA-DQA1, and HLA-DRB1 (DR4 subtypes) alleles; for INS and protein tyrosine phosphatase, non-receptor type 22 gene polymorphisms (rs689 and rs2476601); and for diabetes-associated autoantibodies.	0.249975099	2014	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23054006	52	ACP1	umls:C0011854	BeFree	The aim of this study was to determine whether the functional protein tyrosine phosphatase nonreceptor 22 (PTPN22) C1858T polymorphism (rs2476601) confers susceptibility to type 1 diabetes (T1D).	0.031422582	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	15719322	26191	PTPN22	umls:C0011854	BeFree	We report that a recently described functional single-nucleotide polymorphism (rs2476601, encoding R620W) in the intracellular tyrosine phosphatase (PTPN22) confers risk of four separate autoimmune phenotypes in these families: T1D, RA, SLE, and Hashimoto thyroiditis.	0.474764423	2005	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	22429252	26191	PTPN22	umls:C0011854	BeFree	Association of PTPN22 C1858T polymorphism and type 1 diabetes: a meta-analysis.	0.474764423	2012	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	15620463	26191	PTPN22	umls:C0011854	BeFree	Association of the single nucleotide polymorphism C1858T of the PTPN22 gene with type 1 diabetes.	0.474764423	2005	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19188433	26191	PTPN22	umls:C0011854	BeFree	PTPN22(R620W) allele T was associated with development of persistent islet autoimmunity (hazard ratio 1.83 [95% CI 1.27-2.63]) controlling for ethnicity, presence of HLA-DR3/4,DQB1*0302, and having a first-degree relative with type 1 diabetes.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19815302	26191	PTPN22	umls:C0011854	BeFree	Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in Croatians.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	22429252	52	ACP1	umls:C0011854	BeFree	Recently, protein tyrosine phosphatase nonreceptor 22 (PTPN22) C1858T polymorphism has been identified as a susceptibile gene for type 1 diabetes (T1D), but studies are inconsistence, In order to assess the association between PTPN22C1858T polymorphism and T1D based on different ethnicities, a meta-analysis was performed, including 26 studies, total of 16,240 patients and 17,997 controls.	0.031422582	2012	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23054006	26191	PTPN22	umls:C0011854	BeFree	Meta-analysis of the family-based association between the PTPN22 C1858T polymorphism and type 1 diabetes.	0.474764423	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	25243643	26191	PTPN22	umls:C0011854	BeFree	Analysis of PTPN22 C1858T gene polymorphism in cases with type 1 diabetes of Azerbaijan, Northwest Iran.	0.474764423	2014	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17697317	26191	PTPN22	umls:C0011854	BeFree	Susceptibility to type 1 diabetes conferred by the PTPN22 C1858T polymorphism in the Spanish population.	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23291413	26191	PTPN22	umls:C0011854	BeFree	In conclusion, this meta-analysis suggests that C1858T polymorphism in PTPN22 is associated with elevated T1D risk among Caucasian population.	0.474764423	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17259401	26191	PTPN22	umls:C0011854	BeFree	PTPN22 R620W functional variant in type 1 diabetes and autoimmunity related traits.	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	15004560	26191	PTPN22	umls:C0011854	UNIPROT	We report that a single-nucleotide polymorphism (SNP) in the gene (PTPN22) encoding the lymphoid protein tyrosine phosphatase (LYP), a suppressor of T-cell activation, is associated with type 1 diabetes mellitus (T1D).	0.474764423	2004	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	16464986	52	ACP1	umls:C0011854	BeFree	The minor allele of the R620W missense single-nucleotide polymorphism (SNP; rs2476601) in the PTPN22 (protein tyrosine phosphatase non-receptor 22) gene has been reported to be associated with multiple autoimmune diseases, including type 1 diabetes, systemic lupus erythematosus, rheumatoid arthritis, juvenile idiopathic arthritis, autoimmune thyroiditis and vitiligo.	0.031422582	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19188433	1493	CTLA4	umls:C0011854	BeFree	The influence of polymorphisms of INS(-23Hph1), CTLA-4(T17A), and PTPN22(R620W) on development of persistent islet autoimmunity and progression to type 1 diabetes was evaluated by parametric models and by survival analyses.	0.247813496	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	18305142	52	ACP1	umls:C0011854	BeFree	The disease association of the common 1858C>T Arg620Trp (rs2476601) nonsynonymous single nucleotide polymorphism (SNP) of protein tyrosine phosphatase; nonreceptor type 22 (PTPN22) on chromosome 1p13 has been confirmed in type 1 diabetes and also in other autoimmune diseases, including rheumatoid arthritis and Graves' disease.	0.031422582	2008	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	18056891	26191	PTPN22	umls:C0011854	BeFree	Genotype, allele, and phenotype distributions of the PTPN22 C1858T variant revealed similar frequencies in autoimmune diabetes with high GADA titer and juvenile-onset type 1 diabetes.	0.474764423	2008	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19956096	26191	PTPN22	umls:C0011854	BeFree	rs2476601 T allele (R620W) defines high-risk PTPN22 type I diabetes-associated haplotypes with preliminary evidence for an additional protective haplotype.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	21429197	3630	INS	umls:C0011854	BeFree	The PTPN22 C1858T gene variant is associated with proinsulin in new-onset type 1 diabetes.	0.370897401	2011	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19815302	1493	CTLA4	umls:C0011854	BeFree	Association of PTPN22 C1858T and CTLA-4 A49G polymorphisms with Type 1 Diabetes in Croatians.	0.247813496	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23076337	26191	PTPN22	umls:C0011854	BeFree	The results showed a remarkable pattern; PTPN22 C1858T was strongly associated with type I diabetes, rheumatoid arthritis, immune thrombocytopenia, generalized vitiligo with concomitant autoimmune diseases, idiopathic inflammatory myopathies, Graves' disease, juvenile idiopathic arthritis, myasthenia gravis, systemic lupus erythematosus, anti-neutrophil cytoplasmic antibody-associated vasculitis and Addison's disease.	0.474764423	2012	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23261816	26191	PTPN22	umls:C0011854	BeFree	We highlight the pathogenic significance of the C1858T PTPN22 polymorphism in human autoimmunity with special reference to Type 1 diabetes.	0.474764423	2012	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	18194365	52	ACP1	umls:C0011854	BeFree	The functional (R620W) variant of human PTPN22 (protein tyrosine phosphatase non-receptor 22) gene has been implicated in the risk to several autoimmune disorders, including type 1 diabetes, Graves' disease, rheumatoid arthritis and systemic lupus erythematosus.	0.031422582	2008	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19956109	26191	PTPN22	umls:C0011854	BeFree	Fourth, at PTPN22, there was evidence for a novel contribution to T1D risk, independent of the replicated effect of the R620W variant.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23936838	26191	PTPN22	umls:C0011854	BeFree	The role of PTPN22 C1858T gene polymorphism in diabetes mellitus type 1: first evaluation in Greek children and adolescents.	0.474764423	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17334650	26191	PTPN22	umls:C0011854	BeFree	TPOAbs status did not correlate with age at diagnosis of type 1 diabetes or with PTPN22 (Arg620Trp; rs2476601).	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19473815	26191	PTPN22	umls:C0011854	BeFree	Interplay between PTPN22 C1858T polymorphism and cow's milk formula exposure in type 1 diabetes.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	25333705	52	ACP1	umls:C0011854	BeFree	Among the genetic variants associated with type 1 diabetes, the C1858T (Lyp) polymorphism of the protein tyrosine phosphatase non-receptor type 22 (PTPN22) gene alters the function of T cells but also of B cells in innate and adaptive immunity.	0.031422582	2014	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23438410	52	ACP1	umls:C0011854	BeFree	The protein tyrosine phosphatase N22 (PTPN22) gene C1858T polymorphism has been reported to be associated with susceptibility to type 1 diabetes (T1D) in relatively small sample sizes.	0.031422582	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	24913133	52	ACP1	umls:C0011854	BeFree	A nonsynonymous SNP +1858C/T (rs2476601) in the protein tyrosine phosphatase, nonreceptor type 22(PTPN22) gene leading to Arg 620 Trp substitution is known to be associated with susceptibility to type 1 diabetes (T1D) and several other autoimmune diseases.	0.031422582	2014	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	22069277	26191	PTPN22	umls:C0011854	BeFree	These results indicate that the PTPN22 gene polymorphism independent of the SNP rs2476601 might be a supplementary risk factor to AITD, but not in T1D in Koreans, contradicting a major contributory influence of the PTPN22 gene in explaining common mechanism underlying multiple autoimmune diseases.	0.474764423	2011	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23438410	26191	PTPN22	umls:C0011854	BeFree	PTPN22 gene polymorphism (C1858T) is associated with susceptibility to type 1 diabetes: a meta-analysis of 19,495 cases and 25,341 controls.	0.474764423	2013	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	16868974	26191	PTPN22	umls:C0011854	BeFree	The R620W (1858C-->T) polymorphism in PTPN22 has been implicated in type 1 diabetes mellitus, rheumatoid arthritis, Graves' disease, Hashimoto thyroiditis, autoimmune thyroid disease, and systemic lupus erythematosus (SLE).	0.474764423	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	25333705	26191	PTPN22	umls:C0011854	BeFree	Among the genetic variants associated with type 1 diabetes, the C1858T (Lyp) polymorphism of the protein tyrosine phosphatase non-receptor type 22 (PTPN22) gene alters the function of T cells but also of B cells in innate and adaptive immunity.	0.474764423	2014	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	21829393	26191	PTPN22	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.474764423	2011	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19188433	3630	INS	umls:C0011854	BeFree	The influence of polymorphisms of INS(-23Hph1), CTLA-4(T17A), and PTPN22(R620W) on development of persistent islet autoimmunity and progression to type 1 diabetes was evaluated by parametric models and by survival analyses.	0.370897401	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	16614815	3630	INS	umls:C0011854	BeFree	Lymphoid tyrosine phosphatase (LYP/PTPN22) Arg620Trp variant regulates insulin autoimmunity and progression to type 1 diabetes.	0.370897401	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	16614815	26191	PTPN22	umls:C0011854	BeFree	Lymphoid tyrosine phosphatase (LYP/PTPN22) Arg620Trp variant regulates insulin autoimmunity and progression to type 1 diabetes.	0.474764423	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	20510318	52	ACP1	umls:C0011854	BeFree	The R620W polymorphism in the protein-tyrosine-phosphatase nonreceptor type 22 gene (PTPN22) confers susceptibility to type 1 diabetes (T1D) and other autoimmune diseases.	0.031422582	2010	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	15526003	26191	PTPN22	umls:C0011854	BeFree	A functional polymorphism (1858C/T) in the PTPN22 gene is linked and associated with type I diabetes in multiplex families.	0.474764423	2004	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	19430480	26191	PTPN22	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.474764423	2009	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	23261816	52	ACP1	umls:C0011854	BeFree	An increasing amount of epidemiologic investigations has associated the presence of the C1858T polymorphism in the protein tyrosine phosphatase non-receptor type 22 (PTPN22) gene to the onset of several autoimmune diseases including insulin-dependent diabetes mellitus (Type 1 diabetes).	0.031422582	2012	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17130532	26191	PTPN22	umls:C0011854	BeFree	A variant (R620W) of PTPN22 was consistently associated with type 1 diabetes in Caucasian populations, but the variant was absent in Asian populations including Japanese.	0.474764423	2006	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2476601	17554260	26191	PTPN22	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.474764423	2007	PTPN22;AP4B1-AS1	1	113834946	A	G
rs2488457	22572103	26191	PTPN22	umls:C0011854	BeFree	Association of the PTPN22 gene (+1858C/T, -1123G/C) polymorphisms with type 1 diabetes mellitus: a systematic review and meta-analysis.	0.474764423	2012	PTPN22;AP4B1-AS1	1	113872746	G	C,A
rs2542151	18978792	56984	PSMG2	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.007101096	2008	NA	18	12779948	G	T
rs2542151	17554260	5771	PTPN2	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.136916611	2007	NA	18	12779948	G	T
rs2542151	18978792	5771	PTPN2	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.136916611	2008	NA	18	12779948	G	T
rs2542151	22021207	5771	PTPN2	umls:C0011854	BeFree	The single nucleotide polymorphism (SNP) rs2542151 within the gene locus region encoding protein tyrosine phosphatase non-receptor type 2 (PTPN2) has been associated with Crohn's disease (CD), ulcerative colitis (UC), type-I diabetes, and rheumatoid arthritis.	0.136916611	2012	NA	18	12779948	G	T
rs2542151	17554260	56984	PSMG2	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.007101096	2007	NA	18	12779948	G	T
rs2542151	21829393	56984	PSMG2	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.007101096	2011	NA	18	12779948	G	T
rs2644261	19956107	53347	UBASH3A	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.132920927	2009	FHOD3	18	36640528	T	C
rs2644261	19956107	91010	FMNL3	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.000271442	2009	FHOD3	18	36640528	T	C
rs2644261	19956107	23274	CLEC16A	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.280934317	2009	FHOD3	18	36640528	T	C
rs2650000	24906951	6927	HNF1A	umls:C0011854	BeFree	For type 1 diabetes, a strong association was seen for MTNR1B (rs10830963, p = 3.2 × 10(-6)) and HNF1A (rs2650000, p = 0.0012).	0.280662875	2014	NA	12	120951159	A	C
rs2664170	19430480	139716	GAB3	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.122367032	2009	GAB3	X	154717327	G	A
rs2664170	19430480	139716	GAB3	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	GAB3	X	154717327	G	A
rs2734583	NA	7919	DDX39B	umls:C0011854	GAD	NA	0.005276948	NA	DDX39B;SNORD117;ATP6V1G2-DDX39B	6	31537703	A	G
rs2736340	21765104	640	BLK	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.000271442	2011	NA	8	11486464	C	T
rs2736340	21765104	83648	FAM167A	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.002638474	2011	NA	8	11486464	C	T
rs2736340	21765104	10666	CD226	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.134278137	2011	NA	8	11486464	C	T
rs2756923	19392800	3803	KIR2DL2	umls:C0011854	GAD	[Association of KIR2DL2 polymorphism rs2756923 with type 1 diabetes and preliminary evidence for lack of inhibition through HLA-C1 ligand binding.]	0.012920927	2009	NA	NA	NA	NA	NA
rs2756923	19392800	3803	KIR2DL2	umls:C0011854	BeFree	Association of KIR2DL2 polymorphism rs2756923 with type 1 diabetes and preliminary evidence for lack of inhibition through HLA-C1 ligand binding.	0.012920927	2009	NA	NA	NA	NA	NA
rs2763979	NA	3304	HSPA1B	umls:C0011854	GAD	NA	0.00554839	NA	HSPA1B	6	31826815	C	T
rs28665122	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	VIMP	15	101277522	C	T
rs2872507	21829393	124626	ZPBP2	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.002367032	2011	NA	17	39884510	G	A
rs28933375	18198357	3117	HLA-DQA1	umls:C0011854	BeFree	Typing for HLA-DQA1 and DQB1 alleles showed that type 1 diabetes-predisposing DQ alpha/DQ beta heterodimers were less frequent in patients carrying N252S or P477A than in those carrying wild-type PRF1.	0.342549538	2008	PRF1	10	70598966	T	C
rs28933375	18198357	3118	HLA-DQA2	umls:C0011854	BeFree	Typing for HLA-DQA1 and DQB1 alleles showed that type 1 diabetes-predisposing DQ alpha/DQ beta heterodimers were less frequent in patients carrying N252S or P477A than in those carrying wild-type PRF1.	0.018653544	2008	PRF1	10	70598966	T	C
rs2903692	17632545	23274	CLEC16A	umls:C0011854	GAD	[A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.]	0.280934317	2007	CLEC16A	16	11144926	G	A
rs2903692	18940880	23274	CLEC16A	umls:C0011854	GAD	[Furthermore, a joint analysis, with the INS and CTLA4 SNPs, revealed that CTLA4 rs3087243, ERBB3 rs2292399, and CLEC16A rs2903692, but not INS rs689, were significant risk factors for the cooccurrence of AITD in Japanese T1D.]	0.280934317	2009	CLEC16A	16	11144926	G	A
rs2903692	19337309	23274	CLEC16A	umls:C0011854	BeFree	Independent genome-wide association studies highlighted the function of CLEC16A/KIAA0350 polymorphisms modifying the risk to either multiple sclerosis (rs6498169) or type 1 diabetes (rs2903692).	0.280934317	2009	CLEC16A	16	11144926	G	A
rs2903692	17632545	23274	CLEC16A	umls:C0011854	GWASCAT	A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene.	0.280934317	2007	CLEC16A	16	11144926	G	A
rs2929366	18927125	133690	CAPSL	umls:C0011854	BeFree	While no evidence was obtained for four genomic regions (rs2929366/NM_144715 on chromosome 3, rs9127/Q7Z4C4 on chromosome 5, rs1445898/CAPSL on chromosome 5 and rs2302188/NM_033543 on chromosome 19), we provide strong evidence for association between T1D and multiple SNPs in the IFIH1 linkage disequilibrium (LD) block on chromosome 2q.	0.00554839	2009	EFHB	3	19918264	G	A
rs3024505	19430480	3586	IL10	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.156990835	2009	NA	1	206766559	G	A
rs3087243	18978792	1493	CTLA4	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.247813496	2008	CTLA4	2	203874196	G	A
rs3087243	21829393	1493	CTLA4	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.247813496	2011	CTLA4	2	203874196	G	A
rs3087243	17209142	348120	LINC01193	umls:C0011854	BeFree	Furthermore, evidence of a statistical interaction with the known T1D susceptibility-associated CTLA4 polymorphism rs3087243 (laboratory name CT60, G>A) was reported (P<0.0001), such that the CBLB SNP rs3772534 G allele was overtransmitted to offspring with the CTLA4 rs3087243 G/G genotype.	0.002442977	2007	CTLA4	2	203874196	G	A
rs3087243	19506323	1493	CTLA4	umls:C0011854	BeFree	With respect to the rs3087243 (+6230G>A) polymorphism of CTLA4, the first sister had type 1 diabetes and AITD and had the GG genotype, whereas the second and third sisters, who had type 1 diabetes without AITD, had the AG genotype.	0.247813496	2009	CTLA4	2	203874196	G	A
rs3087243	24390983	1493	CTLA4	umls:C0011854	BeFree	The aim of this study was to evaluate the association between the rs3087243 polymorphism of the cytotoxic T-lymphocyte-associated antigen-4 (CTLA-4) gene and the risk of type 1 diabetes mellitus (T1D).	0.247813496	2014	CTLA4	2	203874196	G	A
rs3087243	19430480	1493	CTLA4	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.247813496	2009	CTLA4	2	203874196	G	A
rs3118470	20615141	3559	IL2RA	umls:C0011854	BeFree	Previous investigations have also demonstrated that two intronic SNPs (rs706778 and rs3118470) in the interleukin-2 receptor-alpha (IL2RA) gene were associated with type 1 diabetes in the Japanese population.	0.292801815	2010	IL2RA	10	6059750	T	A,C
rs3129860	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	NA	6	32433302	A	G
rs3129871	NA	3122	HLA-DRA	umls:C0011854	GAD	NA	0.13947914	NA	HLA-DRA	6	32438565	A	C
rs3129882	NA	3122	HLA-DRA	umls:C0011854	GAD	NA	0.13947914	NA	HLA-DRA	6	32441753	G	A
rs3129941	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32369909	A	G
rs3129962	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	NA	6	32411606	G	A,C
rs3130299	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NA	6	32235760	A	G
rs3130617	NA	57827	C6orf47	umls:C0011854	GAD	NA	0.004734064	NA	BAG6;C6orf47	6	31659746	C	T
rs3131296	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NOTCH4	6	32205216	C	T
rs3131379	NA	4439	MSH5	umls:C0011854	GAD	NA	0.007372538	NA	MSH5;MSH5-SAPCD1	6	31753256	G	A
rs3132946	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NOTCH4	6	32222251	A	G
rs3134603	NA	9374	PPT2	umls:C0011854	GAD	NA	0.004734064	NA	PPT2;PPT2-EGFL8	6	32158225	A	G
rs3134942	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NOTCH4	6	32200994	G	T
rs3134943	NA	10554	AGPAT1	umls:C0011854	GAD	NA	0.004734064	NA	RNF5;AGPAT1;MIR6833	6	32179984	T	C
rs3134943	NA	6048	RNF5	umls:C0011854	GAD	NA	0.004734064	NA	RNF5;AGPAT1;MIR6833	6	32179984	T	C
rs3135338	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	NA	6	32433440	C	T
rs3135353	NA	56244	BTNL2	umls:C0011854	GAD	NA	0.007372538	NA	NA	6	32425100	C	T
rs316019	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A2	6	160249250	A	C
rs316019	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A2	6	160249250	A	C
rs3184504	19430480	10019	SH2B3	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.257654991	2009	SH2B3	12	111446804	T	C
rs3184504	20546165	10019	SH2B3	umls:C0011854	BeFree	The carriage of the type 1 diabetes-associated R262W variant of human LNK correlates with increased proliferation of peripheral blood monocytes in diabetic patients.	0.257654991	2011	SH2B3	12	111446804	T	C
rs3184504	21829393	10019	SH2B3	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.257654991	2011	SH2B3	12	111446804	T	C
rs3184504	19430480	10019	SH2B3	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.257654991	2009	SH2B3	12	111446804	T	C
rs35667974	20116863	64135	IFIH1	umls:C0011854	BeFree	To establish if these SNPs were also involved in MS susceptibility, we chose to examine the non-synonymous SNP rs35667974/Ile923Val which displayed the strongest effect in T1D and was also shown to lead to a loss of IFIH1 function in an in vitro study.	0.167448922	2010	IFIH1	2	162268127	T	C
rs3740165	20398757	8029	CUBN	umls:C0011854	BeFree	Thus our findings reveal a novel association of the cubilin rs3740165 polymorphism with type 1 diabetes.	0.002638474	2010	CUBN	10	16907551	T	C
rs3741208	17554260	723961	INS-IGF2	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.121357209	2007	IGF2;IGF2-AS;INS-IGF2	11	2148544	A	G
rs3741208	17554260	3481	IGF2	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.214006695	2007	IGF2;IGF2-AS;INS-IGF2	11	2148544	A	G
rs3741208	17554260	51214	IGF2-AS	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.12	2007	IGF2;IGF2-AS;INS-IGF2	11	2148544	A	G
rs3741208	17554260	3481	IGF2	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.214006695	2007	IGF2;IGF2-AS;INS-IGF2	11	2148544	A	G
rs374609439	14679084	50506	DUOX2	umls:C0011854	BeFree	Nicotinamide adenine dinucleotide phosphate oxidase (NADPH oxidase) P22 Phox C242T gene polymorphism in type 1 diabetes.	0.000271442	2003	DUOX2;DUOXA2	15	45116160	T	C
rs374609439	14679084	1535	CYBA	umls:C0011854	BeFree	Nicotinamide adenine dinucleotide phosphate oxidase (NADPH oxidase) P22 Phox C242T gene polymorphism in type 1 diabetes.	0.00554839	2003	DUOX2;DUOXA2	15	45116160	T	C
rs3747517	22053898	64135	IFIH1	umls:C0011854	BeFree	In conclusion, IFIH1 rs3747517, but not rs1990760 polymorphism, plays an important role in type 1 diabetes risk in Chinese Han population.	0.167448922	2012	IFIH1	2	162272314	T	C
rs3757247	18840781	60468	BACH2	umls:C0011854	GAD	[Evaluation of a large number of statistical GWA candidates in several independent cohorts has revealed additional loci that are associated with type 1 diabetes.]	0.254745076	2009	BACH2	6	90247744	C	T
rs3757247	18840781	60468	BACH2	umls:C0011854	GWASCAT	Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.	0.254745076	2009	BACH2	6	90247744	C	T
rs3764021	17554300	29121	CLEC2D	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.122367032	2007	CLEC2D	12	9681032	C	T
rs3764021	17554300	29121	CLEC2D	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.122367032	2007	CLEC2D	12	9681032	C	T
rs376563	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160430734	T	C
rs376563	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	SLC22A3	6	160430734	T	C
rs3772534	17209142	348120	LINC01193	umls:C0011854	BeFree	Furthermore, evidence of a statistical interaction with the known T1D susceptibility-associated CTLA4 polymorphism rs3087243 (laboratory name CT60, G>A) was reported (P<0.0001), such that the CBLB SNP rs3772534 G allele was overtransmitted to offspring with the CTLA4 rs3087243 G/G genotype.	0.002442977	2007	CBLB	3	105702190	C	T
rs3773885	22024547	4321	MMP12	umls:C0011854	BeFree	The haplotype A-C constructed with single nucleotide polymorphisms (SNPs) rs3796268A/G and rs3773885C/T in the MME gene was found to be associated with DN (p = 0.015, OR = 1.33, 95% CI 1.05-1.68) in female T1D patients.	0.000542884	2011	MME	3	155141792	G	A
rs3773885	22024547	4311	MME	umls:C0011854	BeFree	The haplotype A-C constructed with single nucleotide polymorphisms (SNPs) rs3796268A/G and rs3773885C/T in the MME gene was found to be associated with DN (p = 0.015, OR = 1.33, 95% CI 1.05-1.68) in female T1D patients.	0.000271442	2011	MME	3	155141792	G	A
rs3788013	24367383	53347	UBASH3A	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.132920927	2013	UBASH3A	21	42421219	C	A
rs3788013	24367383	114904	C1QTNF6	umls:C0011854	BeFree	C1QTNF6 (rs229541), SNP (rs10517086), and UBASH3A (rs3788013) were associated with development of T1D.	0.12764398	2013	UBASH3A	21	42421219	C	A
rs3788013	21829393	53347	UBASH3A	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.132920927	2011	UBASH3A	21	42421219	C	A
rs3796268	22024547	4321	MMP12	umls:C0011854	BeFree	The haplotype A-C constructed with single nucleotide polymorphisms (SNPs) rs3796268A/G and rs3773885C/T in the MME gene was found to be associated with DN (p = 0.015, OR = 1.33, 95% CI 1.05-1.68) in female T1D patients.	0.000542884	2011	MME	3	155117435	T	C
rs3796268	22024547	4311	MME	umls:C0011854	BeFree	The haplotype A-C constructed with single nucleotide polymorphisms (SNPs) rs3796268A/G and rs3773885C/T in the MME gene was found to be associated with DN (p = 0.015, OR = 1.33, 95% CI 1.05-1.68) in female T1D patients.	0.000271442	2011	MME	3	155117435	T	C
rs3825932	18978792	1512	CTSH	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.250011012	2008	CTSH	15	78943104	T	C
rs3825932	18978792	1512	CTSH	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.250011012	2008	CTSH	15	78943104	T	C
rs3825932	19430480	1512	CTSH	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.250011012	2009	CTSH	15	78943104	T	C
rs3825932	19430480	1512	CTSH	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.250011012	2009	CTSH	15	78943104	T	C
rs386514644	10760079	7450	VWF	umls:C0011854	BeFree	Association between high von willebrand factor levels and the Thr789Ala vWF gene polymorphism but not with nephropathy in type I diabetes. The GENEDIAB Study Group and the DESIR Study Group.	0.000542884	2000	NA	NA	NA	NA	NA
rs386539811	17984244	4852	NPY	umls:C0011854	BeFree	Distribution of neuropeptide Y Leu7Pro polymorphism in patients with type 1 diabetes and diabetic nephropathy among Swedish and American populations.	0.007372538	2007	NA	NA	NA	NA	NA
rs386556293	10553500	3123	HLA-DRB1	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.275239056	1999	NA	NA	NA	NA	NA
rs386556293	10553500	177	AGER	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.008458305	1999	NA	NA	NA	NA	NA
rs386556293	10553500	129831	RBM45	umls:C0011854	BeFree	Human RAGE GLY82SER dimorphism and HLA class II DRB1-DQA1-DQB1 haplotypes in type 1 diabetes.	0.045059351	1999	NA	NA	NA	NA	NA
rs386580517	11064106	1950	EGF	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.000542884	2000	NA	NA	NA	NA	NA
rs386580517	11064106	6402	SELL	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.083181358	2000	NA	NA	NA	NA	NA
rs386580517	11064106	3120	HLA-DQB2	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.029587164	2000	NA	NA	NA	NA	NA
rs386580517	11064106	3119	HLA-DQB1	umls:C0011854	BeFree	It was also shown that there is an association between T668C mutation and low HLA related risk of IDDM development, the highest frequency of F206L mutation in the EGF domain of L-selectin was observed in relatives with 'protective' HLA DQB10602 allele and nonDRB103-nonDRB1*04 haplotype, while in subjects with highest risk of IDDM haplotype the frequency of T668C mutation was similar to the controls.	0.249975099	2000	NA	NA	NA	NA	NA
rs386596107	19834686	6648	SOD2	umls:C0011854	BeFree	The V16A polymorphism in SOD2 is associated with increased risk of diabetic nephropathy and cardiovascular disease in type 1 diabetes.	0.013821129	2009	NA	NA	NA	NA	NA
rs386597997	22573428	3767	KCNJ11	umls:C0011854	BeFree	E23K polymorphism of the KCNJ11 gene in Korean children with type 1 diabetes.	0.135830843	2012	NA	NA	NA	NA	NA
rs386597997	16142506	3767	KCNJ11	umls:C0011854	BeFree	The Glu23Lys polymorphism in KCNJ11 and impaired hypoglycaemia awareness in patients with type 1 diabetes.	0.135830843	2005	NA	NA	NA	NA	NA
rs386609373	16671945	348120	LINC01193	umls:C0011854	BeFree	We assessed the association of five SNPs present in the CTLA-4 gene [-318C/T, -1661A/G and -1722C/T in the promoter region, +49A/G in exon 1 and CT60 in the 3' untranslated region (UTR) region] with type 1 diabetes in North Indian subjects.	0.002442977	2006	NA	NA	NA	NA	NA
rs397507444	16401615	4524	MTHFR	umls:C0011854	BeFree	The objectives of this study were: to determine plasma total homocysteine tHcy levels and the prevalence of hyperhomocysteinemia in children with type 1 diabetes, to determine correlates of plasma tHcy levels with nutritional factor such as serum folic acid and vitamin B12 levels, genetic factors as methylenetetrahydrofolate reductase MTHFR gene polymorphism (C677T and A1298C), to attempt to identify possible dependencies between tHcy and the degree of metabolic control, the duration of the disease and presence of complications, and also to determine the relationship between other coronary risk factors.	0.015287959	2006	MTHFR	1	11794407	T	G
rs4084127	21980299	2249	FGF4	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002367032	2011	NA	11	69781755	G	A
rs41322052	15890549	4846	NOS3	umls:C0011854	BeFree	Recently, we reported a strong association between the eNOS4b/a endothelial nitric oxide synthase (eNOS) polymorphism and severe DR. To examine whether T-786C and C774T eNOS polymorphisms are involved in severe DR, 254 Caucasians with longstanding C-peptide-negative type 1 diabetes, 128 patients with absent/mild DR (control group), and 126 patients with preproliferative/proliferative DR (study group) were genotyped.	0.139555084	2005	NOS3	7	150993018	C	T
rs4151659	20054343	629	CFB	umls:C0011854	BeFree	Markers rs4151659 (mapping to CFB) and rs7762619 (mapping 5' of LTA) were the most strongly associated with T1D on DR3 (P=1.2 x 10(-9) and P=2 x 10(-12), respectively) and DR4 (P=4 x 10(-15) and P=8 x 10(-8), respectively) haplotypes.	0.011639663	2010	CFB	6	31950687	A	G
rs416603	18978792	58531	PRM3	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.002367032	2008	TNP2;LOC105371082	16	11270222	A	T
rs416603	18978792	7142	TNP2	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.002367032	2008	TNP2;LOC105371082	16	11270222	A	T
rs416603	18978792	116028	RMI2	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.002367032	2008	TNP2;LOC105371082	16	11270222	A	T
rs425105	19430480	25865	PRKD2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.122367032	2009	PRKD2	19	46705224	T	C
rs425105	19430480	25865	PRKD2	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	PRKD2	19	46705224	T	C
rs434841	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NOTCH4	6	32223264	G	A
rs439121	19143813	3115	HLA-DPB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.043191728	2009	NA	6	33225090	A	C
rs439121	19143813	3123	HLA-DRB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.275239056	2009	NA	6	33225090	A	C
rs439121	19143813	3119	HLA-DQB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.249975099	2009	NA	6	33225090	A	C
rs439121	19143813	3122	HLA-DRA	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.13947914	2009	NA	6	33225090	A	C
rs4402960	22770937	3481	IGF2	umls:C0011854	BeFree	The present study has replicated the association of IGF2BP2 rs4402960 with T2D in the Czech population and provided data suggesting that IGF2BP2 may have genetic interaction with IGF2 with a protective effect against DN in male patients with T1D.	0.214006695	2012	IGF2BP2	3	185793899	G	T
rs4505848	19430480	84162	KIAA1109	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.127372538	2009	KIAA1109	4	122211337	A	G
rs4505848	19430480	3558	IL2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.026893947	2009	KIAA1109	4	122211337	A	G
rs4505848	19430480	84162	KIAA1109	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.127372538	2009	KIAA1109	4	122211337	A	G
rs4553808	16671945	348120	LINC01193	umls:C0011854	BeFree	We assessed the association of five SNPs present in the CTLA-4 gene [-318C/T, -1661A/G and -1722C/T in the promoter region, +49A/G in exon 1 and CT60 in the 3' untranslated region (UTR) region] with type 1 diabetes in North Indian subjects.	0.002442977	2006	CTLA4	2	203866282	A	G
rs4553808	16671945	1493	CTLA4	umls:C0011854	BeFree	Promoter region -318 C/ T and -1661 A/G CTLA-4 single nucleotide polymorphisms and type 1 diabetes in North Indians.	0.247813496	2006	CTLA4	2	203866282	A	G
rs4646536	23979957	1594	CYP27B1	umls:C0011854	BeFree	DHCR7/NADSYN1 rs12785878 and CYP27B1 rs4646536 may play an important role in islet autoimmunity, the preclinical phase of T1D.	0.021573392	2014	CYP27B1	12	57764205	A	G
rs4646536	23979957	55191	NADSYN1	umls:C0011854	BeFree	DHCR7/NADSYN1 rs12785878 and CYP27B1 rs4646536 may play an important role in islet autoimmunity, the preclinical phase of T1D.	0.000271442	2014	CYP27B1	12	57764205	A	G
rs466452	19746264	4868	NPHS1	umls:C0011854	GAD	[We present the analysis of an intronic polymorphism of the nephrin gene and its relationship to the development of diabetic nephropathy in a study of diabetes type 1 and type 2 patients.]	0.002638474	2009	NPHS1	19	35831607	G	A
rs4728142	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	NA	7	128933913	G	A
rs4728142	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	NA	7	128933913	G	A
rs4728142	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	NA	7	128933913	G	A
rs4763879	19430480	969	CD69	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.244734064	2009	CD69	12	9757568	G	A
rs4763879	19430480	969	CD69	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.244734064	2009	CD69	12	9757568	G	A
rs478222	21980299	22979	EFR3B	umls:C0011854	GWASCAT	A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.	0.122367032	2011	EFR3B	2	25078886	A	T
rs478222	21980299	22979	EFR3B	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.122367032	2011	EFR3B	2	25078886	A	T
rs478582	22960018	2571	GAD1	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.020010754	2013	PTPN2	18	12835977	T	C
rs478582	22960018	3630	INS	umls:C0011854	BeFree	Of the 1692 DAISY children genotyped for VDR rs1544410, VDR rs2228570, VDR rs11568820, PTPN2 rs1893217, and PTPN2 rs478582, 111 developed IA, defined as positivity for GAD, insulin or IA-2 autoantibodies on 2 or more consecutive visits, and 38 IA positive children progressed to T1D.	0.370897401	2013	PTPN2	18	12835977	T	C
rs4788084	19430480	246778	IL27	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.12764398	2009	NPIPB8	16	28528527	C	T
rs4788084	21829393	246778	IL27	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.12764398	2011	NPIPB8	16	28528527	C	T
rs4880	19834686	6648	SOD2	umls:C0011854	BeFree	The V16A polymorphism in SOD2 is associated with increased risk of diabetic nephropathy and cardiovascular disease in type 1 diabetes.	0.013821129	2009	SOD2	6	159692840	A	G
rs4900384	19430480	388011	LINC01550	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002367032	2009	NA	14	98032614	A	G
rs4948088	19430480	23242	COBL	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002909916	2009	NA	7	50959497	A	C
rs4965373	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	VIMP	15	101272190	A	G
rs4965814	18625033	55829	VIMP	umls:C0011854	BeFree	Six polymorphisms distributed through the SEPS1 gene (rs11327127, rs28665122, rs4965814, rs12917258, rs4965373 and rs2101171) were genotyped in more than two thousand patients suffering from type 1 diabetes, rheumatoid arthritis or inflammatory bowel diseases and 550 healthy controls included in the case-control study.	0.000271442	2008	VIMP	15	101273712	C	T
rs4986790	14693986	7099	TLR4	umls:C0011854	BeFree	Our data indicate that Asp299Gly and Thr399Ile genotypes of the TLR4 gene are associated with reduced prevalence of diabetic neuropathy in type 2, but not in type 1, diabetes.	0.011725539	2004	TLR4	9	117713024	A	G
rs4986791	14693986	7099	TLR4	umls:C0011854	BeFree	Our data indicate that Asp299Gly and Thr399Ile genotypes of the TLR4 gene are associated with reduced prevalence of diabetic neuropathy in type 2, but not in type 1, diabetes.	0.011725539	2004	TLR4	9	117713324	C	T
rs5219	22573428	3767	KCNJ11	umls:C0011854	BeFree	E23K polymorphism of the KCNJ11 gene in Korean children with type 1 diabetes.	0.135830843	2012	KCNJ11	11	17388025	T	C
rs5219	16142506	3767	KCNJ11	umls:C0011854	BeFree	The Glu23Lys polymorphism in KCNJ11 and impaired hypoglycaemia awareness in patients with type 1 diabetes.	0.135830843	2005	KCNJ11	11	17388025	T	C
rs539514	21980299	4008	LMO7	umls:C0011854	GWASCAT	A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.	0.122367032	2011	LMO7	13	75752146	A	T
rs539514	21980299	4008	LMO7	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.122367032	2011	LMO7	13	75752146	A	T
rs5498	11132145	3119	HLA-DQB1	umls:C0011854	BeFree	Linkage and association was not found between the ICAM-1 K469E variation and type 1 diabetes in Danish patients (P(tdt)> or =0.48), and our data did not indicate an interaction between ICAM1 and IDDM1 in predisposition to type 1 diabetes in Danes (P=0.78).	0.249975099	2000	ICAM1;ICAM4;LOC105372272	19	10285007	A	G
rs5498	11132145	3383	ICAM1	umls:C0011854	BeFree	The intercellular adhesion molecule-1 K469E polymorphism in type 1 diabetes.	0.018555193	2000	ICAM1;ICAM4;LOC105372272	19	10285007	A	G
rs5498	11132145	3630	INS	umls:C0011854	BeFree	Linkage and association was not found between the ICAM-1 K469E variation and type 1 diabetes in Danish patients (P(tdt)> or =0.48), and our data did not indicate an interaction between ICAM1 and IDDM1 in predisposition to type 1 diabetes in Danes (P=0.78).	0.370897401	2000	ICAM1;ICAM4;LOC105372272	19	10285007	A	G
rs550448	21980299	221895	JAZF1	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002367032	2011	JAZF1-AS1;LOC105375212	7	28189423	G	A
rs550448	21980299	100128081	JAZF1-AS1	umls:C0011854	GWASCAT	A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.	0.12	2011	JAZF1-AS1;LOC105375212	7	28189423	G	A
rs558702	NA	717	C2	umls:C0011854	GAD	NA	0.004734064	NA	C2;ZBTB12	6	31902549	G	A
rs560887	24918535	2646	GCKR	umls:C0011854	BeFree	The study group included 129 children with GCK-MODY from the Polish Registry of Monogenic Diabetes and 395 with type 1 diabetes (T1DM), in whom we genotyped 2 SNPs in G6PC2 (rs560887) and GCKR (rs1260326).	0.000271442	2015	G6PC2	2	168906638	T	C
rs560887	24918535	57818	G6PC2	umls:C0011854	BeFree	The study group included 129 children with GCK-MODY from the Polish Registry of Monogenic Diabetes and 395 with type 1 diabetes (T1DM), in whom we genotyped 2 SNPs in G6PC2 (rs560887) and GCKR (rs1260326).	0.087719925	2015	G6PC2	2	168906638	T	C
rs5742913	19956109	6932	TCF7	umls:C0011854	BeFree	Fifth, among the candidate genes selected for replication, the association of TCF7-P19T with T1D was newly replicated in this study.	0.006362715	2009	TCF7;LOC105379184	5	134115992	C	A,G,T
rs587776825	NA	6927	HNF1A	umls:C0011854	CLINVAR	NA	0.280662875	NA	HNF1A	12	120994322	-	C
rs587780357	NA	6927	HNF1A	umls:C0011854	CLINVAR	NA	0.280662875	NA	HNF1A	12	120993601	G	A
rs596881	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160216207	T	C
rs596881	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160216207	T	C
rs5979785	19956107	91010	FMNL3	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.000271442	2009	NA	X	12953405	C	T
rs5979785	19956107	23274	CLEC16A	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.280934317	2009	NA	X	12953405	C	T
rs5979785	19956107	53347	UBASH3A	umls:C0011854	BeFree	In addition to the support for previously identified loci (PTPN22/1p13; ERBB3/12q13; SH2B3/12q24; CLEC16A/16p13; UBASH3A/21q22), evidence supporting two new and distinct chromosome locations associated with T1D was observed: FHOD3/18q12 (rs2644261, P=5.9 x 10(-4)) and Xp22 (rs5979785, P=6.8 x 10(-3); http://www.T1DBase.org).	0.132920927	2009	NA	X	12953405	C	T
rs61839660	22293688	3559	IL2RA	umls:C0011854	GWASCAT	One is within the IL2RA gene for association with type 1 diabetes and the other in proximity with the CDKN2B gene for association with type 2 diabetes.	0.292801815	2012	IL2RA	10	6052734	C	T
rs61839660	22293688	3559	IL2RA	umls:C0011854	GAD	[One is within the IL2RA gene for association with type 1 diabetes and the other in proximity with the CDKN2B gene for association with type 2 diabetes.]	0.292801815	2012	IL2RA	10	6052734	C	T
rs6498169	19337309	23274	CLEC16A	umls:C0011854	BeFree	Independent genome-wide association studies highlighted the function of CLEC16A/KIAA0350 polymorphisms modifying the risk to either multiple sclerosis (rs6498169) or type 1 diabetes (rs2903692).	0.280934317	2009	CLEC16A	16	11155472	G	A
rs6532197	22685416	3663	IRF5	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.00554839	2012	NA	4	89876150	A	G
rs6532197	22685416	389472	RPS26P32	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.001357209	2012	NA	4	89876150	A	G
rs6532197	22685416	6579	SLCO1A2	umls:C0011854	BeFree	We identified novel cisSNP/transcript associations for human disease-associated variants, including progressive supranuclear palsy SLCO1A2/rs11568563, Parkinson's disease (PD) MMRN1/rs6532197, Paget's disease OPTN/rs1561570; and we confirmed others, including PD MAPT/rs242557, systemic lupus erythematosus and ulcerative colitis IRF5/rs4728142, and type 1 diabetes mellitus RPS26/rs1701704.	0.000271442	2012	NA	4	89876150	A	G
rs6534347	17554300	84162	KIAA1109	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.127372538	2007	KIAA1109	4	122277280	A	G
rs653753	20429798	6581	SLC22A3	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160205969	C	G
rs653753	20429798	6582	SLC22A2	umls:C0011854	BeFree	We detected nominal evidence of association (P < 0.05) between the SLC22A2 (SNPs rs653753, rs596881, and rs316019) and SLC22A3 (SNPs rs376563, rs2048327, rs2457576, and rs1567438) genes and DN and hypertension in Finnish men with T1DM.	0.000542884	2010	NA	6	160205969	C	G
rs6547853	21980299	2355	FOSL2	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002367032	2011	NA	2	28423934	G	A
rs6679677	17554260	10745	PHTF1	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.125005506	2007	PHTF1	1	113761186	C	A
rs6679677	17554300	5781	PTPN11	umls:C0011854	GAD	[Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.]	0.002367032	2007	PHTF1	1	113761186	C	A
rs6679677	17554260	10745	PHTF1	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.125005506	2007	PHTF1	1	113761186	C	A
rs6679677	17554300	10745	PHTF1	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.125005506	2007	PHTF1	1	113761186	C	A
rs6679677	18978792	10745	PHTF1	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.125005506	2008	PHTF1	1	113761186	C	A
rs6822844	20112382	59067	IL21	umls:C0011854	GAD	[Our results indicate that there is an association between rs6822844 and multiple autoimmune diseases in non-European populations. Meta-analysis results strongly reinforce this robust association across multiple autoimmune diseases in both European-derived]	0.012453989	2010	NA	4	122588266	G	T
rs6822844	20112382	3558	IL2	umls:C0011854	GAD	[Our results indicate that there is an association between rs6822844 and multiple autoimmune diseases in non-European populations. Meta-analysis results strongly reinforce this robust association across multiple autoimmune diseases in both European-derived]	0.026893947	2010	NA	4	122588266	G	T
rs689	25964488	55340	GIMAP5	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.084267125	2015	INS;INS-IGF2	11	2160994	A	T
rs689	25964488	55303	GIMAP4	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.000271442	2015	INS;INS-IGF2	11	2160994	A	T
rs689	25964488	3559	IL2RA	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.292801815	2015	INS;INS-IGF2	11	2160994	A	T
rs689	25256132	3119	HLA-DQB1	umls:C0011854	BeFree	One hundred and one children with type 1 diabetes and 160 healthy controls from the same region were studied for HLA-DQB1, HLA-DQA1, and HLA-DRB1 (DR4 subtypes) alleles; for INS and protein tyrosine phosphatase, non-receptor type 22 gene polymorphisms (rs689 and rs2476601); and for diabetes-associated autoantibodies.	0.249975099	2014	INS;INS-IGF2	11	2160994	A	T
rs689	25964488	3630	INS	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.370897401	2015	INS;INS-IGF2	11	2160994	A	T
rs6897932	19744146	3575	IL7R	umls:C0011854	BeFree	The C allele of a single nucleotide polymorphism (SNP), rs6897932, located in the interleukin-7 receptor alpha chain (IL7RA) was recently found to be associated with multiple sclerosis and Type I diabetes.	0.006905599	2009	IL7R	5	35874473	C	T
rs6897932	17554260	3575	IL7R	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.006905599	2007	IL7R	5	35874473	C	T
rs6897932	24242875	3574	IL7	umls:C0011854	BeFree	Former studies demonstrated the single nucleotide polymorphism (SNP) rs6897932 C/T in the IL-7 receptor (IL-7R) gene was associated with susceptibility to autoimmune diseases, including multiple sclerosis and type I diabetes.	0.001085767	2014	IL7R	5	35874473	C	T
rs694739	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC102723878	11	64329761	A	G
rs694739	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	LOC102723878	11	64329761	A	G
rs7020673	19430480	169792	GLIS3	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.247372538	2009	GLIS3	9	4291747	C	G
rs7020673	19430480	169792	GLIS3	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.247372538	2009	GLIS3	9	4291747	C	G
rs706778	20615141	3559	IL2RA	umls:C0011854	BeFree	Previous investigations have also demonstrated that two intronic SNPs (rs706778 and rs3118470) in the interleukin-2 receptor-alpha (IL2RA) gene were associated with type 1 diabetes in the Japanese population.	0.292801815	2010	IL2RA	10	6056986	C	T
rs707915	19143814	4439	MSH5	umls:C0011854	BeFree	The second association was with rs707915 mapping to the MSH5 gene, in a block of six markers significantly associated with T1D after adjusting for LD with DR-DQ.	0.007372538	2009	MSH5;MSH5-SAPCD1	6	31743191	T	A
rs707928	NA	80737	VWA7	umls:C0011854	GAD	NA	0.004734064	NA	VWA7	6	31774813	A	G
rs7111341	19430480	7054	TH	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.00554839	2009	NA	11	2191936	C	T
rs7171171	21829393	10125	RASGRP1	umls:C0011854	GAD	[Eleven of 52 non-MHC T1D loci showed evidence of association with at least one autoantibody at a false discovery rate of 16%: 16p11/IL27-IA-2A, 2q24/IFIH1-IA-2A and PCA, 2q32/STAT4-TPOA, 10p15/IL2RA-GADA, 6q15/BACH2-TPOA, 21q22/UBASH3A-TPOA, 1p13/PTPN22-TPOA, 2q33/CTLA4-TPOA, 4q27/IL2/TPOA, 15q14/RASGRP1/TPOA, and 12q24/SH2B3-GADA and TPOA.]	0.007372538	2011	NA	15	38614840	A	G
rs7202877	19430480	440387	CTRB2	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002367032	2009	NA	16	75213347	T	G
rs7221109	19430480	1236	CCR7	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.002367032	2009	NA	17	40614034	T	C
rs722988	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	10	33137219	T	C
rs722988	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	10	33137219	T	C
rs722988	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	NA	10	33137219	T	C
rs722988	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	10	33137219	T	C
rs722988	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	10	33137219	T	C
rs722988	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	10	33137219	T	C
rs722988	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	10	33137219	T	C
rs722988	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	10	33137219	T	C
rs725613	23922971	22861	NLRP1	umls:C0011854	BeFree	Three variants were found to be significantly associated with type 1 diabetes (T1D): NLRP1 rs12150220 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01), IL2RA rs11594656 (OR = 0.86, 95% CI = 0.82-0.91, P<0.00001), and CLEC16A rs725613 (OR = 0.71, 95% CI = 0.55-0.92, P = 0.01).	0.00554839	2013	CLEC16A	16	11075826	T	G
rs725613	23922971	3559	IL2RA	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.292801815	2013	CLEC16A	16	11075826	T	G
rs725613	23922971	23274	CLEC16A	umls:C0011854	BeFree	Our results demonstrated that IL2RA rs11594656 and CLEC16A rs725613 are protective factors of T1D, while NLRP1 rs12150220 and APOA5 -1131T/C are risky factors of T1D and T2D, respectively.	0.280934317	2013	CLEC16A	16	11075826	T	G
rs731236	23209686	176	ACAN	umls:C0011854	BeFree	A total of 9, 5, 3, and 7 studies were finally included in the analyses for the associations between the VDR TaqI (rs731236), FokI (rs2228570), ApaI (rs7975232), or aggrecan VNTR polymorphisms and the risk of IDD, respectively.	0.001357209	2012	VDR;LOC105369749	12	47844974	A	G
rs733618	16671945	348120	LINC01193	umls:C0011854	BeFree	We assessed the association of five SNPs present in the CTLA-4 gene [-318C/T, -1661A/G and -1722C/T in the promoter region, +49A/G in exon 1 and CT60 in the 3' untranslated region (UTR) region] with type 1 diabetes in North Indian subjects.	0.002442977	2006	CTLA4	2	203866221	T	C
rs743777	21829393	3560	IL2RB	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.002909916	2011	NA	22	37155567	A	G
rs7528684	21829393	115352	FCRL3	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.010011012	2011	FCRL3	1	157701026	A	G
rs7574865	18759272	6775	STAT4	umls:C0011854	BeFree	The association of STAT4 polymorphism rs7574865 with RA was validated in patients of Spanish origin (for T versus G, P = 1.2 x 10(-6), odds ratio [OR] 1.59, 95% confidence interval [95% CI] 1.31-1.92), and the association was described for the first time in both clinical forms of inflammatory bowel disease, Crohn's disease and ulcerative colitis (for T versus G, P = 0.006, OR 1.29, 95% CI 1.07-1.55), and in type 1 diabetes mellitus (for T versus G, P = 0.008, OR 1.36, 95% CI 1.07-1.71).	0.089272631	2008	STAT4	2	191099907	T	G
rs759853	19587357	231	AKR1B1	umls:C0011854	BeFree	The T allele of the AKR1B1 promoter rs759853 variant is also significantly protective against diabetic retinopathy in type 1 diabetes (0.5 [0.35-0.71], P = 1.00 x 10(-4)), regardless of ethnicity.	0.008262808	2009	AKR1B1	7	134459206	G	A
rs763361	21765104	83648	FAM167A	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.002638474	2011	CD226	18	69864406	T	A,C
rs763361	21829393	10666	CD226	umls:C0011854	GAD	[Genome-wide association analysis of autoantibody positivity in type 1 diabetes cases.]	0.134278137	2011	CD226	18	69864406	T	A,C
rs763361	17554260	10666	CD226	umls:C0011854	GWASCAT	Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.	0.134278137	2007	CD226	18	69864406	T	A,C
rs763361	18971939	10666	CD226	umls:C0011854	BeFree	The Ser(307) allele of rs763361 in exon 7 of CD226 predisposes to T1D, MS, and possibly AITD and RA, and based on the tag SNP analysis, could be the causal variant.	0.134278137	2009	CD226	18	69864406	T	A,C
rs763361	21765104	10666	CD226	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.134278137	2011	CD226	18	69864406	T	A,C
rs763361	17554260	10666	CD226	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.134278137	2007	CD226	18	69864406	T	A,C
rs763361	21765104	640	BLK	umls:C0011854	BeFree	We replicated the genetic association with rs13277113 (p = 0.0009, OR 1.46) and rs2736340 (p = 0.0001, OR 1.63) from C8orf13-BLK (8p23.1, associated with RA and systemic lupus erythematosus), and rs763361 (p = 0.03) from CD226 (18q22.3, associated with multiple sclerosis and type 1 diabetes) in the Colombian population.	0.000271442	2011	CD226	18	69864406	T	A,C
rs763361	22941566	10666	CD226	umls:C0011854	BeFree	This meta-analysis demonstrates the CD226 rs763361 polymorphism confers susceptibility to autoimmune disease in Europeans, South Americans and Asians, and in particular, shows that the CD226 rs763361 polymorphism is associated with SLE, SSc and T1D.	0.134278137	2012	CD226	18	69864406	T	A,C
rs763361	24891767	10666	CD226	umls:C0011854	BeFree	CD226 rs763361 is associated with the susceptibility to type 1 diabetes and greater frequency of GAD65 autoantibody in a Brazilian cohort.	0.134278137	2014	CD226	18	69864406	T	A,C
rs763361	24891767	2572	GAD2	umls:C0011854	BeFree	CD226 rs763361 is associated with the susceptibility to type 1 diabetes and greater frequency of GAD65 autoantibody in a Brazilian cohort.	0.118598285	2014	CD226	18	69864406	T	A,C
rs763361	23073294	10666	CD226	umls:C0011854	BeFree	Recently, there has been increasing evidence shown that a non-synonymous exchange (Gly307Ser/rs763361) of the CD226 gene on chromosome 18q22 is linked to several autoimmune diseases (ADs) including type 1 diabetes (T1D), celiac disease (CED), rheumatoid arthritis (RA), multiple sclerosis (MS), Grave's disease, Wegener's granulomatosis (WG), psoriasis, and primary sicca syndrome (pSS).	0.134278137	2013	CD226	18	69864406	T	A,C
rs763361	19536154	10666	CD226	umls:C0011854	BeFree	Recently, there has been increasing evidence that a non-synonymous exchange (Gly307Ser) in the gene for CD226 is linked to several autoimmune diseases including type 1 diabetes, multiple sclerosis (MS), rheumatoid arthritis and Grave's disease.	0.134278137	2009	CD226	18	69864406	T	A,C
rs7762619	20054343	629	CFB	umls:C0011854	BeFree	Markers rs4151659 (mapping to CFB) and rs7762619 (mapping 5' of LTA) were the most strongly associated with T1D on DR3 (P=1.2 x 10(-9) and P=2 x 10(-12), respectively) and DR4 (P=4 x 10(-15) and P=8 x 10(-8), respectively) haplotypes.	0.011639663	2010	LTA;LOC100287329	6	31563533	T	G
rs7775397	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163;LOC105379622;LOC105379643	6	32293475	T	G
rs7804356	19430480	8935	SKAP2	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	SKAP2;LOC105375204	7	26852046	T	C
rs7903146	20546291	3898	LAD1	umls:C0011854	BeFree	Two hundred and fifty patients identified as LADA, divided into two subgroups with low (< or = 32 arbitrary units) or high (> 32 units) GADA titre, 620 subjects with Type 2 diabetes [from the Non-Insulin Requiring Autoimmune Diabetes (NIRAD) study cohort of 5330 subjects] in addition to 551 consecutive cases of Type 1 diabetes and 545 normoglycaemic subjects were analysed for the rs12255372 and rs7903146 polymorphisms of the TCF7L2 gene using Taqman.	0.000814326	2010	TCF7L2	10	112998590	C	T
rs7903146	20546291	6934	TCF7L2	umls:C0011854	BeFree	Two hundred and fifty patients identified as LADA, divided into two subgroups with low (< or = 32 arbitrary units) or high (> 32 units) GADA titre, 620 subjects with Type 2 diabetes [from the Non-Insulin Requiring Autoimmune Diabetes (NIRAD) study cohort of 5330 subjects] in addition to 551 consecutive cases of Type 1 diabetes and 545 normoglycaemic subjects were analysed for the rs12255372 and rs7903146 polymorphisms of the TCF7L2 gene using Taqman.	0.003995683	2010	TCF7L2	10	112998590	C	T
rs7975232	23209686	176	ACAN	umls:C0011854	BeFree	A total of 9, 5, 3, and 7 studies were finally included in the analyses for the associations between the VDR TaqI (rs731236), FokI (rs2228570), ApaI (rs7975232), or aggrecan VNTR polymorphisms and the risk of IDD, respectively.	0.001357209	2012	VDR;LOC105369749	12	47845054	C	A
rs7990	23441825	3118	HLA-DQA2	umls:C0011854	BeFree	The present study found a significant SNP rs7990 of HLA-DQA1 (p = 0.009) negative correlation, again indicating that risk from HLA is considerably more with T1DM.	0.018653544	2013	HLA-DQA1	6	32642188	C	A
rs8035957	18840781	10125	RASGRP1	umls:C0011854	GAD	[Evaluation of a large number of statistical GWA candidates in several independent cohorts has revealed additional loci that are associated with type 1 diabetes.]	0.007372538	2009	RASGRP1	15	38546063	T	C
rs854560	18469206	5444	PON1	umls:C0011854	BeFree	Association between p.Leu54Met polymorphism at the paraoxonase-1 gene and plantar fascia thickness in young subjects with type 1 diabetes.	0.010825337	2008	PON1	7	95316772	A	C,G,N,T
rs910049	NA	10665	C6orf10	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32347950	T	C
rs9127	18927125	133690	CAPSL	umls:C0011854	BeFree	While no evidence was obtained for four genomic regions (rs2929366/NM_144715 on chromosome 3, rs9127/Q7Z4C4 on chromosome 5, rs1445898/CAPSL on chromosome 5 and rs2302188/NM_033543 on chromosome 19), we provide strong evidence for association between T1D and multiple SNPs in the IFIH1 linkage disequilibrium (LD) block on chromosome 2q.	0.00554839	2009	NA	5	97036461	G	A
rs917997	23891168	3606	IL18	umls:C0011854	BeFree	Taken together, these data suggest that the disease-associated rs917997 allele G permits hyperresponsiveness to IL-18, providing a novel target for therapeutic intervention in T1D.	0.02507973	2013	NA	2	102454108	T	C
rs924043	21980299	80069	LINC00574	umls:C0011854	GAD	[A genome-wide meta-analysis of six type 1 diabetes cohorts identifies multiple associated loci.]	0.002367032	2011	NA	6	170063801	T	C
rs9257691	22579560	442191	OR14J1	umls:C0011854	BeFree	A total of 394 Europid families with T1D were genotyped for the single nucleotide polymorphism (SNP) in the olfactory receptor family 14, subfamily J, member 1 (OR14J1) gene, rs9257691, in the MHC telomeric region.	0.000271442	2012	LOC105375005	6	29301152	C	A
rs926070	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	C6orf10;LOC101929163	6	32289789	G	A
rs9267992	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	NA	6	32252620	G	A
rs9268005	NA	4855	NOTCH4	umls:C0011854	GAD	NA	0.007101096	NA	LOC101929163	6	32256611	C	A
rs9268645	19430480	3122	HLA-DRA	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.13947914	2009	HLA-DRA	6	32440750	C	G
rs9268645	19430480	3122	HLA-DRA	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.13947914	2009	HLA-DRA	6	32440750	C	G
rs9268831	19143813	3119	HLA-DQB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.249975099	2009	LOC105379570;LOC105379648;LOC105379652;LOC105379658;LOC105379665	6	32459971	C	T
rs9268831	19143813	3115	HLA-DPB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.043191728	2009	LOC105379570;LOC105379648;LOC105379652;LOC105379658;LOC105379665	6	32459971	C	T
rs9268831	19143813	3123	HLA-DRB1	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.275239056	2009	LOC105379570;LOC105379648;LOC105379652;LOC105379658;LOC105379665	6	32459971	C	T
rs9268831	19143813	3122	HLA-DRA	umls:C0011854	BeFree	Taking both studies together, there is evidence for four T1D-associated regions at 30.0 Mb (HLA-A), 31.4 Mb (HLA-B), 32.5 Mb (rs9268831/HLA-DRA) and 33.2 Mb (rs439121/HLA-DPB1) that are independent of HLA-DRB1/HLA-DQB1.	0.13947914	2009	LOC105379570;LOC105379648;LOC105379652;LOC105379658;LOC105379665	6	32459971	C	T
rs9272346	17554300	3117	HLA-DQA1	umls:C0011854	GWASCAT	Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls.	0.342549538	2007	HLA-DQA1	6	32636595	G	A
rs9272346	18978792	3117	HLA-DQA1	umls:C0011854	GWASCAT	Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.	0.342549538	2008	HLA-DQA1	6	32636595	G	A
rs9388489	19430480	387103	CENPW	umls:C0011854	GWASCAT	Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.	0.122367032	2009	CENPW	6	126377573	A	G
rs9388489	19430480	387103	CENPW	umls:C0011854	GAD	[Genome-wide association study and meta-analysis find that over 40 loci affect risk of type 1 diabetes.]	0.122367032	2009	CENPW	6	126377573	A	G
rs941576	19966805	1735	DIO3	umls:C0011854	GAD	[The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.]	0.002367032	2010	MEG3	14	100839708	A	G
rs941576	19966805	55384	MEG3	umls:C0011854	GAD	[The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.]	0.122638474	2010	MEG3	14	100839708	A	G
rs941576	19966805	55384	MEG3	umls:C0011854	GWASCAT	The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.	0.122638474	2010	MEG3	14	100839708	A	G
rs941576	25602077	8788	DLK1	umls:C0011854	BeFree	Analysis of the paternally expressing delta-like 1 homologue (DLK1) shows that the paternal transmission of type 1 diabetes protective G allele of rs941576 single nucleotide polymorphism (SNP) results in significantly reduced birth weight (-132 g).	0.002909916	2016	MEG3	14	100839708	A	G
rs941576	19966805	8788	DLK1	umls:C0011854	GAD	[The imprinted DLK1-MEG3 gene region on chromosome 14q32.2 alters susceptibility to type 1 diabetes.]	0.002909916	2010	MEG3	14	100839708	A	G
rs947474	18978792	5588	PRKCQ	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.247101096	2008	DKFZp667F0711	10	6348488	G	A
rs947474	18978792	399716	DKFZp667F0711	umls:C0011854	GAD	[Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci.]	0.002367032	2008	DKFZp667F0711	10	6348488	G	A
rs9585056	20827270	1880	GPR183	umls:C0011854	BeFree	The human locus controlling the IDIN was associated with the risk of T1D at single nucleotide polymorphism rs9585056 (P = 7.0 × 10(-10); odds ratio, 1.15), which was one of five single nucleotide polymorphisms in this region associated with EBI2 (GPR183) expression.	0.000542884	2010	NA	13	99429512	C	T
rs9640279	25964488	3630	INS	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.370897401	2015	GIMAP4	7	150571010	G	T
rs9640279	25964488	3559	IL2RA	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.292801815	2015	GIMAP4	7	150571010	G	T
rs9640279	25964488	55303	GIMAP4	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.000271442	2015	GIMAP4	7	150571010	G	T
rs9640279	25964488	55340	GIMAP5	umls:C0011854	BeFree	A gene-gene interaction in the T1D data were observed between the IL2RA rs2104286 and GIMAP4 rs9640279 (OR 1.52, p = 0.0064) and indicated between INS rs689 and GIMAP5 rs2286899.	0.084267125	2015	GIMAP4	7	150571010	G	T
rs9653442	17554260	3899	AFF3	umls:C0011854	GAD	[Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes.]	0.002367032	2007	LINC01104	2	100208905	C	T
rs9729	17130574	57862	ZNF410	umls:C0011854	BeFree	The haplotypes CG (Taq I-Apa I), CGG (Taq I-Apa I-Tru I), CGC (Taq I-Apa I-Fok I), GCTG (rs9729-Taq I-Apa I-Tru I), and CGGC(Taq I-Apa I, Tru I, Fok I) were less often transmitted, thus negatively associated with type 1 diabetes.	0.000271442	2006	VDR	12	47842840	G	T,C
rs9784758	NA	3112	HLA-DOB	umls:C0011854	GAD	NA	0.002638474	NA	NA	6	32820734	T	C
rs9906760	25371288	9020	MAP3K14	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	4375540	A	G
rs9906760	25371288	2534	FYN	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	17	4375540	A	G
rs9906760	25371288	7326	UBE2G1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	4375540	A	G
rs9906760	25371288	1508	CTSB	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	4375540	A	G
rs9906760	25371288	4745	NELL1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000542884	2014	NA	17	4375540	A	G
rs9906760	25371288	3695	ITGB7	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	4375540	A	G
rs9906760	25371288	3575	IL7R	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.006905599	2014	NA	17	4375540	A	G
rs9906760	25371288	3688	ITGB1	umls:C0011854	BeFree	Support, including replication evidence, was obtained for nine T1D associated variants in genes ITGB7 (rs11170466, P=7.86×10-9), NRP1 (rs722988, 4.88×10-8), BAD (rs694739, 2.37×10-7), CTSB (rs1296023, 2.79×10-7), FYN (rs11964650, P=5.60×10-7), UBE2G1 (rs9906760, 5.08×10-7), MAP3K14 (rs17759555, 9.67×10-7), ITGB1 (rs1557150, 1.93×10-6), and IL7R (rs1445898, 2.76×10-6).	0.000271442	2014	NA	17	4375540	A	G
rs9976767	18840781	53347	UBASH3A	umls:C0011854	GWASCAT	Follow-up analysis of genome-wide association data identifies novel loci for type 1 diabetes.	0.132920927	2009	UBASH3A	21	42416281	A	G
rs9976767	18840781	53347	UBASH3A	umls:C0011854	GAD	[Evaluation of a large number of statistical GWA candidates in several independent cohorts has revealed additional loci that are associated with type 1 diabetes.]	0.132920927	2009	UBASH3A	21	42416281	A	G

GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)

GWASdb Snp Trait(Total Genotypes:906)
CHR	POS	SNPID	REF	ALT	ORI_SNPID	PMID	P_VALUE	P_VALUE_TEXT	OR/BETA	CI95_TEXT	GWAS_INITIAL_SAMPLE_SIZE	SUB_POPULATION	SUPER_POPULATION	GWAS_TRAIT	HPO_ID	HPO_TERM	DO_ID	DO_TERM	MESH_ID	MESH_TERM	EFO_ID	EFO_TERM	DOLITE_TERM	RISK_ALLELE	PUBLICATION_TYPE	AA	GENE_SYMBOL	TYPE	REFGENE
1	4983217	rs10915671	G	A	rs10915671	18978792	6.25E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	12264355	rs235219	A	G	rs235219	21980299	1.26E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	64107893	rs2269245	G	A	rs2269245	21980299	4.47E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	64108771	rs2269241	T	C	rs2269241	19430480	4.00E-07	NA	1.1	[1.02-1.18]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2269241-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
1	81560554	rs672797	C	A	rs672797	17632545	4.20E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
1	85311192	rs1983853	C	T	rs1983853	18840781	2.00E-06		1.2	[1.11-1.29]	563 cases; 1,146 controls; 483 case-parents trios	NOPOP(2192)	ALL(2192)	NOPOP(2192)	ALL(2192)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	113922845	rs12049447	C	T	rs12049447	18978792	4.11E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	113967405	rs10458459	C	T	rs10458459	18978792	3.28E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	113974263	rs12030900	A	G	rs12030900	18978792	4.62E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	113985456	rs1573996	A	G	rs1573996	18978792	2.44E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	114063523	rs12022849	A	G	rs12022849	18978792	3.36E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	114139991	rs1217225	G	A	rs1217225	18978792	2.13E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	114303808	rs6679677	C	A	rs6679677	17554260	8.00E-24	NA	1.89	[1.67-2.13]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs6679677-A	Research Support, Non-U.S. Gov't	Validation Studies	C
1	114303808	rs6679677	C	A	rs6679677	17554300	5.00E-26	NA	1.82	[1.59-2.09]	1,924 cases; 2,938 controls	NOPOP(4862)	ALL(4862)	NOPOP(4862)	ALL(4862)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs6679677-A	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
1	114303808	rs6679677	C	A	rs6679677	18978792	1.00E-40	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs6679677-A	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	114377568	rs2476601	A	G	rs2476601	17554260	2.00E-80	NA	1.98	[1.82-2.15]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2476601-T	Research Support, Non-U.S. Gov't	Validation Studies	G,C
1	114377568	rs2476601	A	G	rs2476601	17632545	1.00E-07	NA	1.8	[1.44-2.24]	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2476601-A	Research Support, Non-U.S. Gov't	G,C	NA
1	114377568	rs2476601	A	G	rs2476601	19430480	9.00E-85	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G,C
1	114377568	rs2476601	A	G	rs2476601	21829393	2.00E-111	T1D	2	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs2476601-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G,C
1	114377568	rs2476601	A	G	rs2476601	21980299	5.93E-80	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	114438951	rs1217401	A	G	rs1217401	18978792	2.67E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	157661848	rs11264798	C	G	rs11264798	22526605	4.86E-14	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
1	157668390	rs7522061	T	C	rs7522061	22526605	1.13E-16	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	157668390	rs7522061	T	C	rs7522061	22526605	1.74E-11	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8RA in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	157668390	rs7522061	T	C	rs7522061	22526605	8.13E-12	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8WA in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	157670816	rs7528684	A	G	rs7528684	21829393	1.00E-11	I-A2A	1.52	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs7528684-T	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A,G
1	157670816	rs7528684	A	G	rs7528684	22526605	0.000314	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A,G
1	192478874	rs10801121	G	A	rs10801121	18978792	6.05E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	192492895	rs10754012	A	G	rs10754012	18978792	3.42E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	192506082	rs2209014	G	A	rs2209014	21980299	2.16E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	206939904	rs3024505	G	A	rs3024505	19430480	2.00E-09	NA	1.19	[1.10-1.30]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	206939904	rs3024505	G	A	rs3024505	21829393	5.00E-10	T1D	1.2	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs3024505-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
1	206943968	rs3024493	C	A	rs3024493	21980299	2.01E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	212892113	rs6681171	T	G	rs6681171	21980299	1.41E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
1	228741147	rs7415895	A	G	rs7415895	18978792	8.30E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	10689889	rs736725	G	C	rs736725	18978792	7.07E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	12640741	rs1534422	G	A	rs1534422	19430480	2.00E-06	NA	1.08	[1.02-1.15]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs1534422-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G,A
2	24692809	rs2165738	C	G	rs2165738	18978792	4.00E-06	NA	1.07	[1.01-1.13]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2165738-C	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	25301755	rs478222	A	T	rs478222	21980299	4.00E-09	NA	1.22	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	28646801	rs6547853	G	A	rs6547853	21980299	8.00E-07	NA	1.19	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	37559355	rs6734118	C	A	rs6734118	18978792	3.35E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	43666991	rs7575024	T	C	rs7575024	18978792	8.96E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	43761299	rs17031005	A	G	rs17031005	18978792	5.46E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	63485359	rs17474840	A	G	rs17474840	24595857	6.70E-04	NA	0.25	[0.11-0.39] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs17474840-G	Research Support, Non-U.S. Gov't
2	68758389	rs7420089	C	T	rs7420089	21980299	2.27E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	100460654	rs7583877	C	T	rs7583877	23028342	1.00E-08	NA	1.29	[1.18-1.40]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs7583877-C
2	100460654	rs7583877	C	T	rs7583877	23028342	3.00E-07	ESRD	1.29	[1.17-1.42]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs7583877-C
2	100743492	rs6732141	G	C	rs6732141	23028342	1.68E-05	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
2	100761105	rs12712065	C	G	rs12712065	23028342	8.43E-06	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
2	100813499	rs6740838	T	G	rs6740838	21980299	5.12E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	100825367	rs9653442	C	T	rs9653442	17554260	5.00E-06	NA	1.11	[1.05-1.17]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs9653442-G	Research Support, Non-U.S. Gov't	Validation Studies	T
2	100825367	rs9653442	C	T	rs9653442	18978792	6.38E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	111796833	rs6706577	A	G	rs6706577	18978792	3.00E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	112788418	rs4848967	G	A	rs4848967	21980299	5.04E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	123170441	rs4848180	C	T	rs4848180	24595857	4.36E-04	NA	0.07	[0.03-0.11] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs4848180-C	Research Support, Non-U.S. Gov't
2	154240309	rs10196515	C	A	rs10196515	18978792	2.93E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	163124051	rs1990760	C	T	rs1990760	17554260	2.00E-11	NA	1.18	[1.11-1.23]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs1990760-A	Research Support, Non-U.S. Gov't	Validation Studies	C
2	163124051	rs1990760	C	T	rs1990760	19430480	7.00E-09	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
2	163124051	rs1990760	C	T	rs1990760	21829393	2.00E-14	T1D	1.2	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs1990760-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
2	163124051	rs1990760	C	T	rs1990760	21980299	2.21E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	191974435	rs9967792	T	C	rs9967792	18978792	1.84E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	191976634	rs4853543	A	G	rs4853543	18978792	2.24E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	191989250	rs10931483	A	G	rs10931483	18978792	3.62E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	191996518	rs1551443	T	C	rs1551443	18978792	3.44E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	191998552	rs1584945	C	T	rs1584945	18978792	2.34E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	192001538	rs6744380	A	G	rs6744380	21980299	1.22E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	192002538	rs2356350	G	A	rs2356350	18978792	8.87E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	204731089	rs11571316	G	A	rs11571316	21980299	2.44E-15	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	204738919	rs3087243	G	A	rs3087243	18978792	8.00E-11	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs3087243-A	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	204738919	rs3087243	G	A	rs3087243	19430480	1.00E-15	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
2	204738919	rs3087243	G	A	rs3087243	21829393	2.00E-17	T1D	1.2	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs3087243-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
2	207015772	rs4147713	A	C	rs4147713	18978792	9.24E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
2	213164466	rs10170838	C	T	rs10170838	23028342	9.76E-07	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
2	213168768	rs7588550	G	A	rs7588550	23028342	2.00E-07	NA	1.52	[1.30-1.79]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs7588550-A
3	1421673	rs155390	C	A	rs155390	18978792	1.76E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	11737145	rs7619252	C	T	rs7619252	18978792	8.16E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	21179332	rs4857979	A	G	rs4857979	18978792	9.67E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	46352384	rs6441961	T	C	rs6441961	18978792	1.66E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	46366269	rs2157057	A	G	rs2157057	18978792	7.05E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	46636530	rs17078977	C	T	rs17078977	21980299	4.03E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	64614313	rs7652817	G	A	rs7652817	23028342	5.02E-05	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
3	64620801	rs11719363	G	T	rs11719363	23028342	4.66E-05	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
3	94183112	rs17749495	A	C	rs17749495	18978792	5.30E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	114926956	rs6786991	G	A	rs6786991	18978792	4.59E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	114934339	rs2085700	A	C	rs2085700	18978792	5.97E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	145819723	rs1449440	G	T	rs1449440	18978792	4.42E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
3	165717417	rs1839308	G	C	rs1839308	21980299	3.60E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
4	26085511	rs10517086	G	A	rs10517086	19430480	5.00E-10	NA	1.09	[1.02-1.17]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs10517086-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
4	26120001	rs11933540	T	C	rs11933540	21980299	1.76E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
4	75328108	rs11725706	G	A	rs11725706	18978792	4.42E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
4	122928286	rs1465041	T	C	rs1465041	18978792	7.92E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
4	123132492	rs4505848	A	G	rs4505848	19430480	5.00E-13	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
4	123184411	rs6827756	T	C	rs6827756	21980299	2.47E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
4	123198435	rs6534347	A	G	rs6534347	17554300	2.00E-06	NA	1.3	[1.10-1.55]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs6534347-A	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
4	123329362	rs17388568	G	A	rs17388568	17554300	3.00E-06	NA	1.26	[1.11-1.42]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs17388568-A	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
4	123329362	rs17388568	G	A	rs17388568	21829393	6.00E-06	T1D	1.1	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs17388568-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
4	123377980	rs2069762	A	C	rs2069762	21829393	5.00E-07	T1D	1.12	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs2069762-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
4	174574406	rs11723864	C	G	rs11723864	23028342	7.00E-07	NA	1.51	[1.29-1.78]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs11723864-G
4	175642699	rs11725853	G	A,C	rs11725853	24595857	8.00E-07	NA	0.11	[0.07-0.16] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs11725853-A	Research Support, Non-U.S. Gov't
4	180951694	rs9683583	G	A	rs9683583	23028342	8.91E-04	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
5	35577257	rs286405	C	T	rs286405	19875614	6.70E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
5	35874575	rs6897932	C	T	rs6897932	17554260	8.00E-06		1.12	[1.06-1.19]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs6897932-G	Research Support, Non-U.S. Gov't	Validation Studies	C
5	35910529	rs1445898	C	T	rs1445898	17554260	8.00E-06		1.12	[1.06-1.19]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs1445898-G	Research Support, Non-U.S. Gov't	Validation Studies	G,A
5	80368763	rs17211233	T	C	rs17211233	24595857	1.48E-04	NA	0.13	[0.06-0.2] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs17211233-C	Research Support, Non-U.S. Gov't
5	86294669	rs7722135	C	T	rs7722135	18978792	4.59E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
5	86319936	rs2640457	C	T	rs2640457	18978792	4.30E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
5	86399262	rs2544677	G	A,C	rs2544677	18978792	1.80E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
5	86404890	rs2112168	C	T	rs2112168	18978792	7.55E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
5	87751752	rs7728883	G	A	rs7728883	24595857	7.86E-04	NA	0.04	[0.02-0.07] unit decrease	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs7728883-A	Research Support, Non-U.S. Gov't
5	128232901	rs6873372	C	T	rs6873372	18978792	6.18E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
5	132628884	rs17166496	G	C	rs17166496	17554300	5.00E-06	NA	1.3	[1.15-1.47]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs17166496-G	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
5	150836580	rs17802828	C	T	rs17802828	23028342	6.10E-04	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
5	166866436	rs6887079	C	T	rs6887079	18978792	3.95E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	27810626	rs175597	T	C	rs175597	17632545	5.31E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	27859568	rs200968	T	C	rs200968	17632545	3.33E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	28948092	rs3130837	G	T	rs3130837	17632545	4.79E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	28954293	rs3129791	G	A	rs3129791	17632545	6.98E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	29179237	rs3130817	T	G	rs3130817	17632545	7.42E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	29240378	rs3117326	C	T	rs3117326	17632545	7.94E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	29356331	rs9257809	A	G	rs9257809	17632545	3.09E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	29442701	rs2746150	C	T	rs2746150	17632545	1.77E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	29472916	rs757256	C	T	rs757256	17632545	2.23E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	29537224	rs1235162	A	G	rs1235162	17632545	8.05E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	29828972	rs9258750	A	G	rs9258750	22526605	2.06E-09	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
6	29945949	rs3132685	G	A,C,T	rs3132685	17632545	4.05E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	HCG9
6	30032522	rs8321	A	C	rs8321	17632545	4.29E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	ZNRD1
6	30038647	rs9261290	T	C	rs9261290	17632545	1.22E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	RNF39
6	30078275	rs2523989	C	T	rs2523989	17632545	8.05E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	TRIM31
6	30079993	rs2523987	A	C	rs2523987	17632545	3.38E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	TRIM31
6	30080274	rs2517598	G	A	rs2517598	17632545	3.59E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	TRIM31
6	30092707	rs1419675	G	T	rs1419675	17632545	2.06E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	30105743	rs2107202	T	C	rs2107202	17632545	1.23E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TRIM40
6	30207495	rs2844773	C	A	rs2844773	17632545	1.41E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30231224	rs3094073	G	A	rs3094073	17632545	1.67E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T,C	NA
6	30256936	rs1264622	C	T	rs1264622	17632545	5.17E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30279130	rs3130380	G	A	rs3130380	17632545	9.89E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HCG18
6	30321189	rs3094061	A	C	rs3094061	17632545	3.75E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	30327839	rs3130350	G	T	rs3130350	17632545	8.43E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	30328753	rs3094621	T	C	rs3094621	17632545	3.08E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30332555	rs1012411	T	G	rs1012411	17632545	1.21E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	30333505	rs3094054	G	T	rs3094054	17632545	3.18E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	30339564	rs3130361	A	G	rs3130361	17632545	3.93E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30339602	rs2844746	T	C	rs2844746	17632545	1.46E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	30344645	rs3132631	C	T	rs3132631	17632545	1.44E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30345118	rs3132630	C	T	rs3132630	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30451904	rs3094694	T	C	rs3094694	17632545	2.60E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	LOC100653026
6	30544401	rs3132610	A	G	rs3132610	17632545	3.25E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	ABCF1
6	30652781	rs9262143	C	T	rs9262143	17632545	3.61E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	PPP1R18
6	30693816	rs3095329	A	G	rs3095329	17632545	4.20E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	30697447	rs3094127	A	G	rs3094127	17632545	2.58E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	FLOT1
6	30726939	rs3095340	A	C	rs3095340	17632545	2.89E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	30728360	rs3094122	T	G	rs3094122	17632545	4.70E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T,C	NA
6	30739846	rs6911628	C	T	rs6911628	17632545	2.36E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	30763756	rs3131063	G	A	rs3131063	17632545	6.97E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	30782002	rs886424	C	T	rs886424	17632545	3.31E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30796545	rs1264350	T	C	rs1264350	17632545	1.00E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	30824532	rs2844659	C	T	rs2844659	17632545	6.12E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	30829522	rs2844657	A	G	rs2844657	17632545	4.20E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	30893941	rs4678	G	A	rs4678	17632545	1.75E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	VARS2
6	30905313	rs3132571	A	G	rs3132571	17632545	2.33E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	30920124	rs3132580	G	A	rs3132580	17632545	1.87E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	DPCR1
6	30932309	rs2844697	C	T	rs2844697	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	30933794	rs3095089	G	T	rs3095089	17632545	4.56E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	30955681	rs1634731	G	A	rs1634731	17632545	6.54E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	MUC21
6	31010200	rs2508015	G	A	rs2508015	17632545	2.78E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31018407	rs2517532	A	G	rs2517532	17632545	1.33E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31018546	rs2523864	C	T	rs2523864	17632545	2.54E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A,G	NA
6	31058340	rs3130544	C	A	rs3130544	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31067009	rs2517403	T	C	rs2517403	17632545	2.08E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A,G	NA
6	31074101	rs2517485	C	T	rs2517485	17632545	4.18E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31075481	rs2844635	A	G	rs2844635	17632545	1.42E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31081205	rs2233956	T	C	rs2233956	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	C6orf15
6	31101674	rs3130564	C	T	rs3130564	17632545	5.46E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	PSORS1C1
6	31129310	rs7750641	C	T	rs7750641	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TCF19
6	31132085	rs3130933	T	C	rs3130933	17632545	1.60E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	POU5F1
6	31145920	rs887464	C	T	rs887464	17632545	7.17E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	PSORS1C3
6	31240692	rs2395471	G	A	rs2395471	17632545	5.77E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HLA-C
6	31240721	rs2249742	C	T	rs2249742	17632545	3.48E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-C
6	31243170	rs3132486	G	A	rs3132486	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31243170	rs3132486	G	A	rs3132486	pha002862	6.12E-79	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	31245736	rs6906846	A	G	rs6906846	17632545	1.18E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31247135	rs4386816	T	C	rs4386816	17632545	3.86E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31264461	rs3094682	A	C	rs3094682	17632545	1.12E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31265490	rs2247056	T	C	rs2247056	17632545	4.53E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31272261	rs6457374	C	T	rs6457374	17632545	1.78E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31274693	rs3094691	G	A	rs3094691	17632545	2.87E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31277988	rs7755852	A	G	rs7755852	17632545	1.98E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31281876	rs1634747	G	A	rs1634747	17632545	1.17E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31308630	rs9265797	G	A	rs9265797	17632545	2.11E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31312326	rs3134792	T	G	rs3134792	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31317347	rs2156875	C	T	rs2156875	17632545	1.04E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31320538	rs2442719	C	T	rs2442719	17632545	2.69E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31321211	rs2596501	C	T	rs2596501	17632545	6.66E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HLA-B
6	31321685	rs1058026	A	C	rs1058026	17632545	1.71E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-B
6	31336250	rs2523535	A	G	rs2523535	17632545	9.98E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31336870	rs2253907	C	T	rs2253907	17632545	8.10E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31336870	rs2253907	C	T	rs2253907	pha002862	2.99E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	31340559	rs2394990	C	A	rs2394990	17632545	5.16E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31342631	rs2254556	T	C	rs2254556	17632545	8.05E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31349922	rs9266722	C	T	rs9266722	17632545	2.92E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31350802	rs2844533	G	A	rs2844533	17632545	1.82E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31352040	rs2442749	T	C	rs2442749	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31352774	rs6903496	G	A	rs6903496	17632545	7.67E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31355318	rs2596560	T	C	rs2596560	17632545	2.83E-27	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31355318	rs2596560	T	C	rs2596560	pha002862	6.64E-134	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	31364707	rs2251396	G	A	rs2251396	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31367865	rs2523454	G	A	rs2523454	17632545	3.33E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	MICA
6	31428967	rs2596472	G	A	rs2596472	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	HCP5
6	31432125	rs2284178	C	T	rs2284178	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	HCP5
6	31438368	rs2244839	G	A	rs2244839	17632545	1.31E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	HCG26
6	31440082	rs1055569	C	T	rs1055569	17632545	2.48E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31440497	rs2516440	G	A	rs2516440	17632545	9.58E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	HCG26
6	31443323	rs12660382	C	T	rs12660382	17632545	1.11E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31445909	rs2395488	A	G	rs2395488	17632545	1.33E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31445909	rs2395488	A	G	rs2395488	pha002862	1.05E-104	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	NA	NA	NA	NA
6	31446466	rs2248372	G	A	rs2248372	17632545	2.79E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31446796	rs2248462	G	A	rs2248462	17632545	4.34E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31448315	rs2516424	A	G	rs2516424	17632545	4.44E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31448315	rs2516424	A	G	rs2516424	pha002862	8.37E-105	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	NA	NA	NA	NA
6	31448533	rs2248617	C	T	rs2248617	17632545	7.77E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31448533	rs2248617	C	T	rs2248617	pha002862	1.68E-104	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	NA	NA	NA	NA
6	31448976	rs3099844	C	A	rs3099844	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31449327	rs2905722	A	G	rs2905722	17632545	2.02E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31449994	rs2516509	T	C	rs2516509	17632545	6.02E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	NA
6	31459742	rs2516415	G	A	rs2516415	17632545	1.90E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31459742	rs2516415	G	A	rs2516415	pha002862	4.45E-74	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	31463963	rs2534678	G	T	rs2534678	17632545	8.10E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	MICB
6	31472459	rs2534657	C	T	rs2534657	17632545	3.56E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	MICB
6	31472720	rs2855812	G	T	rs2855812	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	MICB
6	31472720	rs2855812	G	T	rs2855812	22526605	0.0000225	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	NA
6	31472720	rs2855812	G	T	rs2855812	pha002862	2.55E-96	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	NA	MICB	intron	NM_005931
6	31478986	rs2246618	C	T	rs2246618	17632545	9.61E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	MICB
6	31478986	rs2246618	C	T	rs2246618	pha002862	1.65E-78	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	MICB	nearGene-3	NM_005931
6	31481105	rs2516400	G	A	rs2516400	17632545	3.66E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31481105	rs2516400	G	A	rs2516400	pha002862	4.45E-81	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	31481526	rs2516398	G	T	rs2516398	17632545	1.42E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31481526	rs2516398	G	T	rs2516398	pha002862	7.76E-78	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	31483415	rs2844494	C	A	rs2844494	17632545	2.76E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31483415	rs2844494	C	A	rs2844494	pha002862	4.45E-80	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	31483458	rs9267444	G	A	rs9267444	17632545	1.55E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31505480	rs2734583	A	G	rs2734583	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	DDX39B
6	31505480	rs2734583	A	G	rs2734583	pha002862	5.29E-68	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	DDX39B	intron	NM_004640
6	31529883	rs2516390	C	T	rs2516390	17632545	2.62E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	LOC100287329
6	31531215	rs928815	T	G	rs928815	17632545	4.32E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LOC100287329
6	31536224	rs2844484	A	G	rs2844484	17632545	3.14E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LOC100287329
6	31540784	rs1041981	C	A	rs1041981	17632545	4.14E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LTA
6	31555130	rs2256965	A	G,T	rs2256965	17632545	4.55E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LST1
6	31568469	rs2857595	G	A	rs2857595	17632545	3.47E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31572927	rs9378200	T	C	rs9378200	17632545	3.80E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	31593476	rs2260000	A	G	rs2260000	17632545	3.18E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	PRRC2A
6	31597753	rs2242660	G	A	rs2242660	pha002862	3.94E-109	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	PRRC2A	intron	NM_080686
6	31601843	rs3115663	T	C	rs3115663	17632545	5.56E-25	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	PRRC2A
6	31602967	rs1046089	G	A	rs1046089	pha002862	1.28E-124	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	PRRC2A	missense	NM_080686
6	31603770	rs11229	A	G	rs11229	17632545	3.89E-25	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	PRRC2A
6	31604044	rs3132453	T	G	rs3132453	17632545	4.89E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	PRRC2A
6	31610529	rs1077393	A	G	rs1077393	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	BAG6
6	31610686	rs1052486	A	G	rs1052486	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	BAG6
6	31613739	rs3130048	T	C	rs3130048	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	BAG6
6	31616366	rs805303	G	A	rs805303	pha002862	2.79E-119	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	BAG6	intron	NM_004639
6	31618761	rs3130050	G	A	rs3130050	17632545	2.76E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	BAG6
6	31618761	rs3130050	G	A	rs3130050	pha002862	1.52E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	BAG6	intron	NM_004639
6	31619576	rs3117583	A	G	rs3117583	17632545	1.20E-24	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	BAG6
6	31620520	rs3117582	T	G	rs3117582	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	APOM
6	31620520	rs3117582	T	G	rs3117582	pha002862	2.62E-83	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	APOM	intron	NM_001256169
6	31627523	rs3130617	C	T	rs3130617	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	C6orf47
6	31627523	rs3130617	C	T	rs3130617	pha002862	6.29E-135	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	C6orf47	missense	NM_021184
6	31632134	rs3130618	C	A	rs3130618	17632545	1.56E-24	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	GPANK1
6	31639979	rs9267532	C	T	rs9267532	17632545	4.86E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T,C	LY6G5B
6	31646398	rs2280800	C	A	rs2280800	17632545	2.30E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	LY6G5C
6	31665194	rs805274	T	C	rs805274	17632545	1.91E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	ABHD16A
6	31681160	rs385306	G	A	rs385306	17632545	1.91E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LY6G6E
6	31687008	rs1065356	G	A	rs1065356	17632545	2.55E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LY6G6C
6	31688200	rs376510	C	T	rs376510	17632545	7.11E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	LY6G6C
6	31688217	rs805294	A	G	rs805294	17632545	7.28E-25	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	NA	LY6G6C
6	31721033	rs3131379	G	A	rs3131379	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	MSH5
6	31721033	rs3131379	G	A	rs3131379	pha002862	7.24E-85	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	MSH5	intron	NM_002441
6	31742590	rs707928	A	G	rs707928	17632545	1.00E-22	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	VWA7
6	31742590	rs707928	A	G	rs707928	pha002862	8.89E-111	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	VWA7	intron	NM_025258
6	31764899	rs480092	T	C	rs480092	17632545	1.11E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	31778272	rs2227956	G	A	rs2227956	17632545	8.19E-18	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HSPA1L
6	31778272	rs2227956	G	A	rs2227956	pha002862	1.23E-115	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	HSPA1L	missense	NM_005527
6	31794592	rs2763979	C	T	rs2763979	17632545	8.74E-23	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HSPA1B
6	31794592	rs2763979	C	T	rs2763979	pha002862	3.26E-99	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	HSPA1B	nearGene-5	NM_005346
6	31802541	rs9368699	T	C	rs9368699	17632545	7.04E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	SNORD48
6	31810085	rs3115673	G	T	rs3115673	17632545	8.46E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	31824828	rs9267649	A	G	rs9267649	17632545	6.41E-21	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	31824828	rs9267649	A	G	rs9267649	pha002862	3.11E-126	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	31845985	rs9267658	T	C	rs9267658	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	SLC44A4
6	31845985	rs9267658	T	C	rs9267658	pha002862	2.51E-84	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	SLC44A4	intron	NM_025257
6	31851234	rs652888	A	G	rs652888	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	EHMT2
6	31870326	rs558702	G	A	rs558702	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	C2
6	31870326	rs558702	G	A	rs558702	pha002862	1.60E-86	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	C2	intron	NM_001178063
6	31870856	rs9267665	C	T	rs9267665	17632545	1.48E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	C2
6	31918860	rs1270942	A	G	rs1270942	17632545	4.76E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	CFB
6	31918860	rs1270942	A	G	rs1270942	pha002862	4.69E-86	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	CFB	intron	NM_001710
6	31933161	rs406936	G	A	rs406936	17632545	3.23E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	SKIV2L
6	31933518	rs492899	T	C	rs492899	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	SKIV2L
6	31934372	rs454212	C	T	rs454212	17632545	5.12E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	SKIV2L
6	31940897	rs389884	A	G	rs389884	17632545	7.86E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	STK19
6	31940897	rs389884	A	G	rs389884	pha002862	8.47E-87	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	STK19	intron	NM_004197
6	31941557	rs387608	G	A	rs387608	17632545	1.38E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	STK19
6	32026808	rs12198173	G	A	rs12198173	17632545	6.66E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TNXB
6	32050067	rs185819	T	C	rs185819	17632545	1.52E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TNXB
6	32050758	rs1150754	C	T	rs1150754	17632545	7.91E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TNXB
6	32050758	rs1150754	C	T	rs1150754	pha002862	1.96E-106	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	TNXB	intron	NM_019105
6	32064726	rs1150752	T	C	rs1150752	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	TNXB
6	32064726	rs1150752	T	C	rs1150752	pha002862	3.64E-86	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	TNXB	missense	NM_019105
6	32066765	rs13199524	C	T	rs13199524	17632545	1.72E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TNXB
6	32071893	rs3134954	C	T	rs3134954	17632545	1.39E-19	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A,G	TNXB
6	32071893	rs3134954	C	T	rs3134954	pha002862	1.40E-108	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A,G	TNXB	intron	NM_019105
6	32074804	rs12153855	T	C	rs12153855	17632545	1.24E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	TNXB
6	32076499	rs2269426	G	A	rs2269426	17632545	3.50E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TNXB
6	32109979	rs204999	A	G	rs204999	17632545	1.90E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32120715	rs1053924	T	C	rs1053924	17632545	1.88E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32126002	rs3134603	A	G	rs3134603	17632545	1.82E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	PPT2
6	32126002	rs3134603	A	G	rs3134603	pha002862	3.36E-116	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	PPT2	intron	NM_138717
6	32141883	rs408359	G	A	rs408359	17632545	5.04E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	AGPAT1
6	32147761	rs3134943	T	C	rs3134943	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	RNF5
6	32147761	rs3134943	T	C	rs3134943	pha002862	2.82E-105	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	RNF5	intron	NM_006913
6	32149816	rs3134940	T	C	rs3134940	17632545	2.23E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	AGER
6	32161324	rs12663103	T	C	rs12663103	17632545	2.36E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	GPSM3
6	32161366	rs204991	T	C	rs204991	17632545	1.53E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G,A	GPSM3
6	32161430	rs204990	C	A	rs204990	17632545	3.08E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	GPSM3
6	32168771	rs3134942	G	T	rs3134942	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NOTCH4
6	32168771	rs3134942	G	T	rs3134942	pha002862	1.92E-85	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NOTCH4	cds-synon	NM_004557
6	32172993	rs3131296	C	T	rs3131296	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32172993	rs3131296	C	T	rs3131296	pha002862	5.53E-85	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NOTCH4	intron	NM_004557
6	32182759	rs206015	G	A	rs206015	17632545	3.78E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NOTCH4
6	32184345	rs404860	T	C	rs404860	17632545	9.16E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NOTCH4
6	32185796	rs8192591	C	T	rs8192591	17632545	3.16E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32186872	rs2256594	A	G	rs2256594	17632545	5.91E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NOTCH4
6	32189032	rs415929	T	C	rs415929	17632545	2.30E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32190028	rs3132946	A	G	rs3132946	17632545	2.31E-18	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32190028	rs3132946	A	G	rs3132946	pha002862	4.92E-126	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NOTCH4	intron	NM_004557
6	32191041	rs434841	G	A	rs434841	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NOTCH4
6	32191041	rs434841	G	A	rs434841	pha002862	3.80E-96	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NOTCH4	intron	NM_004557
6	32191339	rs3830041	C	T	rs3830041	17632545	1.15E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32192560	rs2267644	G	A	rs2267644	17632545	4.33E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NOTCH4
6	32193678	rs479536	G	A	rs479536	17632545	1.56E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NOTCH4
6	32199144	rs377763	C	A	rs377763	17632545	1.36E-25	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32203537	rs3130299	A	G	rs3130299	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32203537	rs3130299	A	G	rs3130299	pha002862	1.19E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32205045	rs549182	G	A	rs549182	17632545	7.61E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32209861	rs507778	C	T	rs507778	17632545	2.19E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32211085	rs412657	T	G	rs412657	17632545	4.68E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32218989	rs9296015	G	A	rs9296015	17632545	8.28E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32219725	rs4959089	A	G	rs4959089	17632545	1.75E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32220397	rs9267992	G	A	rs9267992	17632545	7.57E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32220397	rs9267992	G	A	rs9267992	pha002862	2.98E-161	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32224388	rs9268005	C	A	rs9268005	17632545	8.73E-26	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32224388	rs9268005	C	A	rs9268005	pha002862	6.93E-161	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32244627	rs3130340	T	C	rs3130340	17632545	2.46E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32245827	rs3115553	C	T	rs3115553	17632545	2.68E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32257566	rs926070	G	A	rs926070	17632545	7.95E-27	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32257566	rs926070	G	A	rs926070	pha002862	3.19E-161	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32261252	rs7775397	T	G	rs7775397	17632545	4.98E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	C6orf10
6	32261252	rs7775397	T	G	rs7775397	pha002862	2.58E-96	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	C6orf10	missense	NM_006781
6	32266506	rs6906662	G	A	rs6906662	17632545	2.78E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32273765	rs6457536	A	G	rs6457536	17632545	1.60E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32282854	rs6910071	A	G	rs6910071	17632545	3.44E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	C6orf10
6	32299822	rs1003878	G	A	rs1003878	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	C6orf10
6	32315727	rs910049	T	C	rs910049	17632545	5.42E-27	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32315727	rs910049	T	C	rs910049	pha002862	1.38E-188	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	C6orf10	intron	NM_006781
6	32317635	rs2076537	G	A	rs2076537	17632545	2.01E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	C6orf10
6	32321597	rs1265761	A	G	rs1265761	17632545	1.94E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	C6orf10
6	32322393	rs1265759	C	T	rs1265759	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32322393	rs1265759	C	T	rs1265759	pha002862	8.91E-105	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	C6orf10	intron	NM_006781
6	32323529	rs1265758	A	G	rs1265758	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	C6orf10
6	32323529	rs1265758	A	G	rs1265758	pha002862	7.66E-98	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	C6orf10	intron	NM_006781
6	32326045	rs2395150	G	A	rs2395150	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32326045	rs2395150	G	A	rs2395150	pha002862	6.15E-98	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	C6orf10	intron	NM_006781
6	32336187	rs3129934	T	C	rs3129934	17632545	3.23E-22	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	C6orf10
6	32336766	rs3129939	A	G	rs3129939	17632545	2.22E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	C6orf10
6	32337686	rs3129941	A	G	rs3129941	17632545	4.78E-28	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	C6orf10
6	32337686	rs3129941	A	G	rs3129941	pha002862	1.37E-197	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	C6orf10	missense	NM_006781
6	32338695	rs3129943	A	G	rs3129943	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	C6orf10
6	32339647	rs2050189	T	C	rs2050189	17632545	2.64E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	C6orf10
6	32346794	rs1980495	A	C	rs1980495	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32348145	rs2395157	A	G	rs2395157	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32354428	rs4424066	A	G	rs4424066	17632545	2.16E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32358513	rs3117098	G	A	rs3117098	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32358513	rs3117098	G	A	rs3117098	pha002862	1.69E-106	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32361111	rs3817973	C	T	rs3817973	17632545	2.73E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HCG23
6	32363215	rs1980493	T	C	rs1980493	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	BTNL2
6	32363215	rs1980493	T	C	rs1980493	pha002862	4.90E-69	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	BTNL2	intron	NM_019602
6	32363816	rs2076530	T	C	rs2076530	17632545	3.21E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	BTNL2
6	32368087	rs3817963	T	C	rs3817963	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	BTNL2
6	32371619	rs3793126	A	G	rs3793126	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	BTNL2
6	32373698	rs3806156	G	T	rs3806156	17632545	5.12E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	BTNL2
6	32376471	rs3763313	A	C	rs3763313	17632545	6.01E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	BTNL2
6	32379383	rs3129962	G	A,C	rs3129962	17632545	2.20E-18	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32379383	rs3129962	G	A,C	rs3129962	pha002862	5.23E-98	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32379506	rs17208888	G	A	rs17208888	17632545	6.34E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32380208	rs3129963	A	G	rs3129963	17632545	5.40E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32383108	rs9268528	A	G	rs9268528	17632545	8.18E-19	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32383223	rs9268530	T	C	rs9268530	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32384721	rs9268542	A	G	rs9268542	17632545	7.19E-18	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32387780	rs2395162	G	T	rs2395162	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32392877	rs3135353	C	T	rs3135353	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32392877	rs3135353	C	T	rs3135353	pha002862	1.15E-84	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32400344	rs9501626	C	A	rs9501626	17632545	2.56E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32401079	rs3129860	A	G	rs3129860	17632545	3.84E-25	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32401079	rs3129860	A	G	rs3129860	pha002862	8.62E-192	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32401217	rs3135338	C	T	rs3135338	17632545	5.55E-47	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A,G	NA
6	32401217	rs3135338	C	T	rs3135338	pha002862	1.59E-280	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A,G	NA	NA	NA
6	32401327	rs7356880	C	T	rs7356880	17632545	1.11E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32402705	rs2027856	G	A	rs2027856	17632545	3.32E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32402889	rs9268615	G	A	rs9268615	17632545	9.07E-22	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32404859	rs2395173	A	G	rs2395173	17632545	2.35E-52	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32404859	rs2395173	A	G	rs2395173	pha002862	1.19E-281	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32404878	rs2395174	T	G	rs2395174	17632545	2.02E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32405026	rs2395175	G	A	rs2395175	17632545	4.82E-19	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32406342	rs3129871	A	C	rs3129871	17632545	1.87E-57	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	HLA-DRA
6	32406342	rs3129871	A	C	rs3129871	pha002862	1.15E-299	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	HLA-DRA	nearGene-5	NM_019111
6	32408527	rs9268645	C	G	rs9268645	19430480	1.00E-100	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
6	32409530	rs3129882	G	A	rs3129882	pha002862	1.39E-178	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	HLA-DRA	intron	NM_019111
6	32411523	rs2239804	T	C	rs2239804	17632545	5.69E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HLA-DRA
6	32413317	rs2395182	G	T	rs2395182	17632545	8.86E-28	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DRA
6	32428285	rs6903608	C	T	rs6903608	17632545	1.61E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32428285	rs6903608	C	T	rs6903608	pha002862	1.55E-144	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32433167	rs2395185	G	T	rs2395185	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32569691	rs477515	G	A	rs477515	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	LOC100507709
6	32570400	rs2516049	T	C	rs2516049	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	LOC100507709
6	32572251	rs2858870	T	C	rs2858870	17632545	5.54E-18	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	LOC100507709
6	32572251	rs2858870	T	C	rs2858870	pha002862	6.07E-83	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	LOC100507709	intron	XM_003119260
6	32573415	rs601945	A	G	rs601945	17632545	1.53E-57	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	LOC100507709
6	32577380	rs660895	A	G	rs660895	17632545	1.28E-43	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32590463	rs9271568	G	A	rs9271568	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32590722	rs17533090	G	T	rs17533090	17632545	6.78E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32590925	rs3129763	G	A	rs3129763	17632545	3.41E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32602430	rs17211510	C	A	rs17211510	17632545	2.00E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32604372	rs9272346	G	A	rs9272346	17554300	5.00E-134	NA	5.49	[4.83-6.24]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs9272346-G	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
6	32604372	rs9272346	G	A	rs9272346	18978792	6.00E-129	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs9272346-G	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	32605884	rs2187668	C	T	rs2187668	17632545	2.39E-55	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DQA1
6	32627714	rs1063355	T	G	rs1063355	pha002862	1.33E-219	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	HLA-DQB1	UTR-3	NM_002123
6	32654714	rs9275184	T	C	rs9275184	17632545	4.50E-72	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32655218	rs2856683	T	G	rs2856683	17632545	1.24E-22	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32657578	rs7774434	T	C	rs7774434	17632545	3.33E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32658079	rs7775228	T	C	rs7775228	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T,C	NA
6	32658624	rs2157051	G	A	rs2157051	pha002862	1.32E-252	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32664960	rs9357152	A	G	rs9357152	pha002862	1.91E-141	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32665728	rs9275312	A	G	rs9275312	17632545	9.90E-60	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32665759	rs148735424	G	GCTTCGT	rs9275313	17632545	7.06E-67	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32665759	rs9275313	G	T	rs9275313	17632545	7.06E-67	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32666526	rs1794282	C	T	rs1794282	17632545	1.65E-19	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32666526	rs1794282	C	T	rs1794282	pha002862	2.48E-103	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32666822	rs9275328	C	T	rs9275328	17632545	1.02E-59	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32667910	rs2647044	G	A	rs2647044	17632545	1.00E-16	NA	8.3	[6.97-9.89]	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2647044-A	Research Support, Non-U.S. Gov't	G	NA
6	32668296	rs9275371	T	C	rs9275371	17632545	3.07E-39	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32668846	rs9275383	G	T	rs9275383	17632545	3.28E-69	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32669084	rs9275388	T	C	rs9275388	17632545	6.04E-39	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32669767	rs2647050	T	C	rs2647050	17632545	1.02E-55	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32670000	rs2858308	G	T	rs2858308	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32670110	rs9275408	T	C	rs9275408	17632545	5.47E-39	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32670255	rs2856718	C	T	rs2856718	17632545	1.59E-55	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32670956	rs2856705	C	T	rs2856705	17632545	2.22E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32677088	rs9275555	C	T	rs9275555	17632545	2.54E-42	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32677152	rs16898264	G	A	rs16898264	17632545	3.06E-55	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32680928	rs7765379	T	G	rs7765379	17632545	5.32E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32680970	rs7745656	G	T	rs7745656	17632545	3.60E-44	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32680970	rs7745656	G	T	rs7745656	pha002862	3.18E-161	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32681277	rs2858331	A	G	rs2858331	17632545	5.32E-45	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32681277	rs2858331	A	G	rs2858331	pha002862	3.49E-160	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32681355	rs9275595	T	C	rs9275595	17632545	1.72E-41	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32681631	rs9275596	C	T	rs9275596	17632545	2.05E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T,C	NA
6	32681676	rs3104402	T	G	rs3104402	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32682137	rs3957148	A	G	rs3957148	17632545	1.20E-66	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32682812	rs9275602	C	A	rs9275602	17632545	5.62E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C,A	NA
6	32682862	rs3892710	C	T	rs3892710	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32685865	rs9275653	G	A	rs9275653	17632545	2.54E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32686084	rs12177980	G	A	rs12177980	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32686084	rs12177980	G	A	rs12177980	pha002862	5.87E-92	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32689529	rs9461799	T	C	rs9461799	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32689529	rs9461799	T	C	rs9461799	pha002862	4.85E-92	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32698457	rs9276162	G	A	rs9276162	17632545	4.69E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32702813	rs9276291	T	C	rs9276291	17632545	7.21E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32705276	rs13199787	C	T	rs13199787	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32705276	rs13199787	C	T	rs13199787	pha002862	2.51E-96	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	32706334	rs7773694	A	G	rs7773694	17632545	3.01E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32706478	rs7755596	C	T	rs7755596	17632545	3.54E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32707295	rs9276370	G	T	rs9276370	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DQA2
6	32711178	rs17500468	A	G	rs17500468	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HLA-DQA2
6	32713267	rs2239800	A	G	rs2239800	17632545	5.60E-14	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DQA2
6	32722186	rs10807113	C	A	rs10807113	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32722186	rs10807113	C	A	rs10807113	pha002862	7.00E-112	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	32723917	rs7756516	C	T	rs7756516	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	HLA-DQB2
6	32723917	rs7756516	C	T	rs7756516	pha002862	5.36E-112	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	HLA-DQB2	UTR-3	NM_001198858
6	32725193	rs2301271	A	G	rs2301271	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DQB2
6	32725193	rs2301271	A	G	rs2301271	pha002862	2.38E-100	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	HLA-DQB2	intron	NM_001198858
6	32730012	rs7453920	A	G	rs7453920	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DQB2
6	32730012	rs7453920	A	G	rs7453920	pha002862	6.84E-100	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	HLA-DQB2	intron	NM_001198858
6	32730086	rs2051549	G	A	rs2051549	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DQB2
6	32730940	rs2071550	C	A	rs2071550	17632545	1.05E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DQB2
6	32730940	rs2071550	C	A	rs2071550	pha002862	1.29E-95	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	HLA-DQB2	intron	NM_001198858
6	32731258	rs1573649	G	A	rs1573649	17632545	9.00E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DQB2
6	32731258	rs1573649	G	A	rs1573649	pha002862	1.03E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	HLA-DQB2	UTR-5	NM_001198858
6	32732210	rs6903130	G	A	rs6903130	17632545	5.84E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DQB2
6	32732210	rs6903130	G	A	rs6903130	pha002862	6.43E-72	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	HLA-DQB2	nearGene-5	NM_001198858
6	32736936	rs6901084	C	T	rs6901084	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32736936	rs6901084	C	T	rs6901084	pha002862	1.21E-85	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	32737507	rs9368741	G	A	rs9368741	17632545	1.51E-20	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32737507	rs9368741	G	A	rs9368741	pha002862	3.26E-95	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32739888	rs1383265	T	C	rs1383265	17632545	2.42E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32752139	rs719654	G	A	rs719654	17632545	1.98E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32755290	rs7762279	T	C	rs7762279	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32758394	rs7758736	G	A	rs7758736	17632545	1.52E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32763888	rs9276726	T	C	rs9276726	pha002862	1.28E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32765130	rs2621373	T	C	rs2621373	17632545	1.55E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32765182	rs7767167	G	A	rs7767167	pha002862	9.33E-68	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32769663	rs2219893	T	C	rs2219893	17632545	8.88E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32769663	rs2219893	T	C	rs2219893	pha002862	2.56E-68	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	NA	NA	NA
6	32780724	rs11244	G	A	rs11244	17632545	8.01E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	HLA-DOB
6	32780724	rs11244	G	A	rs11244	pha002862	1.20E-102	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	HLA-DOB	UTR-3	NM_002120
6	32781524	rs2621330	C	T	rs2621330	17632545	1.06E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DOB
6	32781776	rs2856997	C	A	rs2856997	17632545	5.43E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	HLA-DOB
6	32782582	rs2071474	C	T	rs2071474	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DOB
6	32782582	rs2071474	C	T	rs2071474	pha002862	6.65E-70	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	HLA-DOB	intron	NM_002120
6	32784620	rs2071472	C	T	rs2071472	17632545	3.33E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G,A	HLA-DOB
6	32784620	rs2071472	C	T	rs2071472	pha002862	1.89E-69	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G,A	HLA-DOB	intron	NM_002120
6	32784676	rs2071554	C	T	rs2071554	17632545	4.92E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DOB
6	32784676	rs2071554	C	T	rs2071554	pha002862	9.90E-81	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	HLA-DOB	missense	NM_002120
6	32784783	rs2071469	C	T	rs2071469	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	HLA-DOB
6	32784783	rs2071469	C	T	rs2071469	pha002862	1.32E-84	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	HLA-DOB	UTR-5	NM_002120
6	32787056	rs1894406	C	T	rs1894406	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32787056	rs1894406	C	T	rs1894406	pha002862	9.40E-88	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32787570	rs2857106	T	C	rs2857106	17632545	4.58E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32788511	rs9784758	T	C	rs9784758	17632545	6.58E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32788511	rs9784758	T	C	rs9784758	pha002862	6.79E-77	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	NA	NA	NA
6	32796226	rs241453	G	A	rs241453	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TAP2
6	32796226	rs241453	G	A	rs241453	pha002862	3.04E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	TAP2	UTR-3	NM_000544
6	32796346	rs241452	T	C	rs241452	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	TAP2
6	32796346	rs241452	T	C	rs241452	pha002862	2.07E-72	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	TAP2	UTR-3	NM_000544
6	32796685	rs241448	A	G	rs241448	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TAP2
6	32796685	rs241448	A	G	rs241448	pha002862	7.86E-70	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	TAP2	STOP-GAIN	NM_000544
6	32796751	rs241447	T	C	rs241447	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	TAP2
6	32796751	rs241447	T	C	rs241447	pha002862	4.69E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	TAP2	missense	NM_000544
6	32797361	rs241440	C	T	rs241440	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TAP2
6	32797361	rs241440	C	T	rs241440	pha002862	2.36E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	TAP2	intron	NM_000544
6	32798731	rs1015166	C	T	rs1015166	17632545	3.94E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	TAP2
6	32798731	rs1015166	C	T	rs1015166	pha002862	8.68E-107	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	TAP2	intron	NM_000544
6	32800224	rs2228397	C	A	rs2228397	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TAP2
6	32804219	rs3819715	G	T	rs3819715	17632545	9.75E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TAP2
6	32804414	rs241427	A	G	rs241427	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TAP2
6	32804414	rs241427	A	G	rs241427	pha002862	3.48E-82	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	TAP2	intron	NM_000544
6	32804909	rs241425	A	G	rs241425	17632545	1.31E-19	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TAP2
6	32804909	rs241425	A	G	rs241425	pha002862	1.60E-94	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	C	TAP2	intron	NM_000544
6	32804934	rs241424	G	A	rs241424	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	TAP2
6	32804934	rs241424	G	A	rs241424	pha002862	7.96E-71	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	TAP2	intron	NM_000544
6	32808232	rs3763349	A	G	rs3763349	17632545	1.72E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	32811383	rs6924102	A	G	rs6924102	17632545	9.53E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	PSMB8
6	32812916	rs2071540	T	C	rs2071540	17632545	1.48E-13	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	LOC100507463
6	32812916	rs2071540	T	C	rs2071540	pha002862	1.26E-69	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	G	LOC100507463	intron	NR_037173
6	32818678	rs2071538	G	A	rs2071538	17632545	2.17E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	TAP1
6	32819865	rs2071481	T	C	rs2071481	17632545	8.63E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	TAP1
6	32832033	rs9276831	A	G	rs9276831	17632545	4.67E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32835258	rs10484566	T	G	rs10484566	17632545	3.82E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32861920	rs241409	A	G	rs241409	17632545	2.65E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	LOC100294145
6	32862740	rs241407	C	T	rs241407	17632545	2.39E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	LOC100294145
6	32870057	rs3101942	G	A	rs3101942	17632545	4.82E-17	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32870057	rs3101942	G	A	rs3101942	pha002862	3.09E-110	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	T	NA	NA	NA
6	32880993	rs154981	C	T	rs154981	17632545	1.11E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32880993	rs154981	C	T	rs154981	pha002862	3.14E-91	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32895580	rs9501239	A	G	rs9501239	17632545	1.18E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32899296	rs154978	C	T	rs154978	17632545	6.00E-15	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32899296	rs154978	C	T	rs154978	pha002862	4.49E-81	phs000180	NA	NA	NA	ALL(0)	ALL(0)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	NA	A	NA	NA	NA
6	32899485	rs3132131	A	G	rs3132131	17632545	2.22E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32913246	rs1480380	C	T	rs1480380	17632545	1.00E-16	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	BRD2
6	32922908	rs209473	A	C	rs209473	17632545	2.42E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32925692	rs580962	C	T	rs580962	17632545	1.55E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32952546	rs206777	G	A	rs206777	17632545	2.18E-12	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32955976	rs188245	A	G	rs188245	17632545	1.18E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	32961104	rs206769	C	T	rs206769	17632545	1.58E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	32981848	rs9276991	A	G	rs9276991	17632545	5.95E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	NA
6	32987774	rs423639	C	T	rs423639	17632545	4.66E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	33034815	rs1367728	G	A	rs1367728	17632545	7.28E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	HLA-DPA1
6	33055538	rs9277554	C	T	rs9277554	17632545	8.17E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	HLA-DPB1
6	33059669	rs2281390	G	T	rs2281390	17632545	2.97E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	NA
6	33061098	rs3128918	T	C	rs3128918	17632545	2.33E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	33072266	rs2064478	C	T	rs2064478	17632545	1.71E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	33075635	rs3117230	A	G	rs3117230	17632545	1.60E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
6	33185578	rs1977090	C	T	rs1977090	17632545	7.38E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	NA
6	36035354	rs2237093	C	T	rs2237093	18978792	1.01E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	38738537	rs7749015	A	G	rs7749015	21980299	6.87E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	56960612	rs4236146	T	G	rs4236146	21980299	1.72E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	90892399	rs2501716	C	G	rs2501716	18978792	7.45E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	90957463	rs3757247	C	T	rs3757247	18840781	1.00E-06		1.13	[1.08-1.19]	563 cases; 1,146 controls; 483 case-parents trios	NOPOP(2192)	ALL(2192)	NOPOP(2192)	ALL(2192)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs3757247-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
6	90958231	rs11755527	C	G	rs11755527	18978792	5.00E-12	NA	1.13	[1.08-1.19]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs11755527-G	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	90958231	rs11755527	C	G	rs11755527	19430480	5.00E-08	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
6	90958231	rs11755527	C	G	rs11755527	21829393	3.00E-08	T1D	1.1	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs11755527-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
6	90968949	rs619192	C	T	rs619192	18978792	3.98E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	90973159	rs1847472	C	A	rs1847472	18978792	6.24E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	90986320	rs604912	A	G	rs604912	18978792	9.13E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	91002494	rs597325	A	G	rs597325	21980299	3.38E-10	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	102209081	rs9390779	T	A	rs9390779	18978792	1.27E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	126661858	rs9375435	C	T	rs9375435	21980299	1.71E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	126698719	rs9388489	A	G	rs9388489	19430480	4.00E-13	NA	1.17	[1.10-1.24]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs9388489-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
6	137973068	rs2327832	A	G	rs2327832	18978792	2.36E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	137978386	rs1878658	A	G	rs1878658	21980299	1.86E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	138006504	rs6920220	G	A	rs6920220	18978792	9.60E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	158757347	rs7755420	G	C	rs7755420	18978792	4.96E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	158758501	rs6926291	C	G	rs6926291	18978792	6.31E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	158768466	rs1754405	A	C	rs1754405	18978792	6.30E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	158916972	rs1041566	G	A	rs1041566	18978792	4.71E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	159472295	rs212402	G	A	rs212402	21980299	2.11E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
6	170379025	rs924043	T	C	rs924043	21980299	8.00E-09	NA	1.35	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	2220092	rs17790410	A	G	rs17790410	18978792	6.28E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	2729765	rs2041342	G	A	rs2041342	18978792	1.30E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	26891665	rs7804356	T	C	rs7804356	19430480	5.00E-09	NA	1.14	[1.06-1.22]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
7	27175295	rs12533947	G	A	rs12533947	21980299	7.08E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	28229042	rs550448	G	A	rs550448	21980299	5.00E-07	NA	1.32	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	28758648	rs879592	A	G	rs879592	24595857	9.20E-04	NA	0.07	[0.03-0.1] unit decrease	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs879592-G	Research Support, Non-U.S. Gov't
7	51027194	rs4948088	A	C	rs4948088	19430480	4.00E-08	NA	1.3	[1.11-1.49]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
7	51052815	rs10231420	G	A	rs10231420	21980299	2.76E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	94031805	rs10255021	G	A	rs10255021	17632545	1.71E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	COL1A2
7	97287858	rs2160774	T	G	rs2160774	21980299	1.00E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
7	153001234	rs588958	G	A	rs588958	18978792	2.40E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	11726817	rs1296023	A	G	rs1296023	18978792	1.36E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	11735184	rs2250903	G	T	rs2250903	18978792	8.79E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	18922577	rs2410601	G	C	rs2410601	24595857	4.00E-06	NA	0.08	[0.04-0.11] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs2410601-G	Research Support, Non-U.S. Gov't
8	72748608	rs6985839	C	T	rs6985839	18978792	4.81E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	103058601	rs6991144	C	T	rs6991144	18978792	5.78E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	118184783	rs13266634	C	T	rs13266634	22526605	3.66E-11	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8A in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
8	118184783	rs13266634	C	T	rs13266634	22526605	7.20E-17	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8RA in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
8	118184783	rs13266634	C	T	rs13266634	22526605	9.26E-27	NA	NA	NA	Up to 2,142 European ancestry cases	European(2142)	ALL(2142)	EUR(2142)	ALL(2142)	Positivity for ZnT8WA in Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
8	119977337	rs12679857	A	G	rs12679857	21980299	4.00E-07	NA	1.2	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
8	123706155	rs4871297	G	A	rs4871297	23028342	2.00E-06	NA	1.23	[1.14-1.35]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs4871297-A
8	129951769	rs7815993	C	T	rs7815993	18978792	2.31E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	4291747	rs7020673	C	G	rs7020673	18978792	4.88E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	4291747	rs7020673	C	G	rs7020673	19430480	5.00E-12	NA	1.14	[1.08-1.20]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
9	4292083	rs10758593	G	A	rs10758593	18840781	3.00E-06		1.13	[1.07-1.19]	563 cases; 1,146 controls; 483 case-parents trios	NOPOP(2192)	ALL(2192)	NOPOP(2192)	ALL(2192)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs10758593-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	4292083	rs10758593	G	A	rs10758593	21980299	1.18E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	4295880	rs4339696	T	G	rs4339696	18978792	4.79E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	16789024	rs10810632	C	T	rs10810632	19875614	2.00E-04	Retinal complications in Type 1 diabetes (mild nonproliferative retinopathy)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	3.70E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	3.70E-08	Glycated Hemoglobin (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	6.79E-06	Retinal complications in Type 1 diabetes (mild)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	7.10E-04	Glycated Hemoglobin (HbA1c) in nondiabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	7.90E-04	Glycated Hemoglobin SNP-treatment interaction (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789024	rs10810632	C	T	rs10810632	19875614	9.00E-08	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789436	rs6475082	G	A	rs6475082	19875614	1.80E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16789436	rs6475082	G	A	rs6475082	19875614	2.70E-04	Glycated Hemoglobin (HbA1c) in nondiabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16789436	rs6475082	G	A	rs6475082	19875614	7.40E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16789436	rs6475082	G	A	rs6475082	19875614	8.28E-06	Retinal complications in Type 1 diabetes (mild)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16789878	rs4961760	C	T	rs4961760	19875614	1.60E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789878	rs4961760	C	T	rs4961760	19875614	2.23E-05	Retinal complications in Type 1 diabetes (mild)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16789878	rs4961760	C	T	rs4961760	19875614	7.10E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
9	16801850	rs2254193	A	C	rs2254193	19875614	1.10E-06	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16801850	rs2254193	A	C	rs2254193	19875614	2.00E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16801850	rs2254193	A	C	rs2254193	19875614	2.26E-04	Retinal complications in Type 1 diabetes (mild)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16801850	rs2254193	A	C	rs2254193	19875614	3.50E-04	Glycated Hemoglobin (HbA1c) in nondiabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16801850	rs2254193	A	C	rs2254193	19875614	5.32E-04	Renal complications in Type 1 diabetes (mild)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	16801850	rs2254193	A	C	rs2254193	19875614	8.95E-04	Renal complications in Type 1 diabetes (severe)	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
9	22024351	rs496892	C	T	rs496892	18978792	6.11E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	34525976	rs7857130	C	G	rs7857130	21980299	7.75E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	72562749	rs996375	T	C	rs996375	18978792	5.25E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	72568187	rs7025044	T	A	rs7025044	18978792	3.96E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	72591055	rs1873825	A	G	rs1873825	18978792	5.86E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	72650127	rs4430153	G	T	rs4430153	18978792	8.32E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
9	114406649	rs2146079	A	G	rs2146079	18978792	6.95E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	6094697	rs61839660	C	T	rs61839660	22293688	5.00E-09	NA	1.6	[1.44-1.76]	16,179 European ancestry individuals	European(16179)	ALL(16179)	EUR(16179)	ALL(16179)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
10	6097283	rs12722495	T	C	rs12722495	21829393	1.00E-38	T1D	1.61	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs12722495-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
10	6110875	rs7090530	C	A	rs7090530	21980299	2.93E-15	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	6123495	rs12251307	C	T	rs12251307	18978792	2.00E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs12251307-T	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	6123495	rs12251307	C	T	rs12251307	19430480	1.00E-13	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	6390450	rs947474	G	A	rs947474	18978792	4.00E-09		1.1	[1.03-1.18]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs947474-G	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	6469817	rs2236380	A	G	rs2236380	21980299	1.87E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	6472891	rs11258747	G	T	rs11258747	19430480	1.00E-07	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
10	33418872	rs2666236	G	A	rs2666236	18978792	2.12E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	66381103	rs2394078	T	C	rs2394078	24595857	5.69E-05	NA	0.26	[0.13-0.39] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs2394078-C	Research Support, Non-U.S. Gov't
10	72370724	rs10999432	T	G	rs10999432	21980299	3.26E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	90021251	rs286493	T	C	rs286493	18978792	6.56E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	90023033	rs10509540	T	C	rs10509540	19430480	1.00E-28	NA	1.33	[1.25-1.43]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	90023033	rs10509540	T	C	rs10509540	21980299	2.83E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	100300182	rs10786436	C	T	rs10786436	21980299	8.00E-07	NA	1.1	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs10786436-T	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
10	108123599	rs1358030	G	A	rs1358030	19875614	1.00E-04	Hypoglycemia in Type 1 diabetes requiring medical assistance	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	1.40E-04	HbA1c levels in conventional treatment of hypoglycemia during DCCT, ordinal uv def2=requiring assistance	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	1.50E-06	Glycemic control (Repeated daily glucose) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	2.00E-09	Glycated Hemoglobin (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	2.20E-09	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	3.80E-10	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	108123599	rs1358030	G	A	rs1358030	19875614	5.50E-04	HbA1c levels in combined treatment strategy of hypoglycemia during DCCT, ordinal uv def2=requiring assistance	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
10	112831994	rs11195417	C	A	rs11195417	21980299	7.55E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	2050299	rs7928968	A	T	rs7928968	18978792	1.18E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	2050299	rs7928968	A	T	rs7928968	21980299	2.78E-14	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	2169774	rs3741208	A	G	rs3741208	17554260	2.00E-07		1.25	[1.15-1.35]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs3741208-T	Research Support, Non-U.S. Gov't	Validation Studies	T
11	2170143	rs1004446	G	A	rs1004446	17632545	4.00E-09	NA	1.61	[1.37-1.89]	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs1004446-C	Research Support, Non-U.S. Gov't	T	IGF2
11	2170143	rs1004446	G	A	rs1004446	21829393	3.00E-23	T1D	1.4	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs1004446-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
11	2182224	rs689	A	T	rs689	21829393	5.00E-196	T1D	NA	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
11	2190951	rs6356	C	T	rs6356	17632545	2.70E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TH
11	2193840	rs10770141	A	G	rs10770141	17632545	2.95E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	TH
11	2195981	rs10743152	T	C	rs10743152	17632545	7.53E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
11	2213166	rs7111341	C	T	rs7111341	17632545	6.90E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	NA
11	2213166	rs7111341	C	T	rs7111341	19430480	4.00E-48	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
11	18267027	rs2468844	C	A,T	rs2468844	21980299	3.21E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	42921770	rs12366181	C	T	rs12366181	24595857	7.33E-05	NA	0.06	[0.03-0.09] unit decrease	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs12366181-T	Research Support, Non-U.S. Gov't
11	69596523	rs4084127	G	A	rs4084127	21980299	3.00E-06	NA	1.11	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	79068444	rs536962	A	G	rs536962	18978792	3.98E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	79068548	rs556857	T	C	rs556857	18978792	3.17E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	86288007	rs7935611	G	T	rs7935611	21980299	1.92E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	92886648	rs10830989	C	G	rs10830989	18978792	8.75E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	127196756	rs10893666	A	G	rs10893666	18978792	7.68E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	128582944	rs609017	C	T	rs609017	18978792	8.89E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	128595173	rs587862	A	G	rs587862	18978792	3.63E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	128602827	rs1939236	A	G	rs1939236	18978792	5.27E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	132287328	rs4937700	C	T	rs4937700	18978792	8.88E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	132291036	rs12417610	G	A	rs12417610	18978792	2.82E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	132314776	rs4936168	T	C	rs4936168	18978792	2.96E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
11	133169430	rs2212517	T	C	rs2212517	21980299	9.06E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	9833628	rs3764021	C	T	rs3764021	17554300	5.00E-08	NA	1.57	[1.38-1.79]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs3764021-C	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
12	9855958	rs11052552	T	G	rs11052552	17554300	7.00E-07	NA	1.49	[1.28-1.73]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs11052552-G	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
12	9885999	rs10492166	G	A	rs10492166	21980299	6.04E-09	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	9910164	rs4763879	G	A	rs4763879	19430480	2.00E-11	NA	1.09	[1.02-1.16]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs4763879-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
12	12646521	rs12819116	G	A	rs12819116	18978792	7.90E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	12651256	rs2417191	G	C	rs2417191	18978792	8.37E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	56412487	rs1701704	T	G	rs1701704	18198356	9.00E-10	NA	1.25	[1.12-1.40]	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs1701704-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
12	56412487	rs1701704	T	G	rs1701704	21829393	5.00E-18	T1D	1.25	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs1701704-T	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
12	56435412	rs705704	G	A	rs705704	21980299	4.31E-31	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	56470625	rs11171739	C	T	rs11171739	17554300	1.00E-11	NA	1.34	[1.17-1.54]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs11171739-C	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
12	56482180	rs2292239	T	G	rs2292239	17554260	2.00E-20	NA	1.28	[1.21-1.35]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2292239-A	Research Support, Non-U.S. Gov't	Validation Studies	A
12	56482180	rs2292239	T	G	rs2292239	18978792	3.00E-16	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2292239-A	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	56482180	rs2292239	T	G	rs2292239	19430480	2.00E-25	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
12	56482180	rs2292239	T	G	rs2292239	21829393	3.00E-27	T1D	1.3	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs2292239-T	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
12	58281495	rs4760341	T	A	rs4760341	21980299	5.82E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	90270430	rs11105447	G	C	rs11105447	21980299	2.36E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	92630354	rs1347750	G	A	rs1347750	24595857	2.74E-05	NA	0.09	[0.05-0.13] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs1347750-A	Research Support, Non-U.S. Gov't
12	111365324	rs886125	A	G	rs886125	18978792	1.50E-08	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	111634281	rs4766553	T	G	rs4766553	18978792	5.78E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	111655513	rs7962233	C	T	rs7962233	18978792	4.51E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	111690579	rs2078851	T	C	rs2078851	18978792	5.01E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	111708458	rs1265564	A	C	rs1265564	22293688	1.00E-16	NA	1.45	[1.28-1.67]	16,179 European ancestry individuals	European(16179)	ALL(16179)	EUR(16179)	ALL(16179)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
12	111754597	rs7300860	T	C	rs7300860	18978792	9.61E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	111884608	rs3184504	T	C	rs3184504	19430480	3.00E-27	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
12	111884608	rs3184504	T	C	rs3184504	21829393	2.00E-38	T1D	1.3	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs3184504-T	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
12	111884608	rs3184504	T	C	rs3184504	21980299	1.77E-21	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112486818	rs17696736	A	G	rs17696736	17554260	2.00E-16	NA	1.22	[1.15-1.28]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs17696736-G	Research Support, Non-U.S. Gov't	Validation Studies	A
12	112486818	rs17696736	A	G	rs17696736	17554300	2.00E-14	NA	1.34	[1.16-1.53]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs17696736-G	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
12	112486818	rs17696736	A	G	rs17696736	18978792	6.00E-18	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs17696736-G	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112517642	rs1980364	T	C	rs1980364	18978792	1.16E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112598321	rs3519	G	A	rs3519	18978792	9.36E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112708426	rs2285809	T	C	rs2285809	18978792	6.80E-07	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112777433	rs1468251	T	C	rs1468251	18978792	3.84E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112963560	rs10774654	A	G	rs10774654	18978792	8.74E-07	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112964070	rs4767879	T	G	rs4767879	18978792	2.99E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112964168	rs4767880	T	G	rs4767880	18978792	2.37E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112965142	rs2384000	A	G	rs2384000	18978792	1.17E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	112977777	rs10850053	T	C	rs10850053	18978792	3.42E-07	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	113016553	rs10850061	C	T	rs10850061	18978792	8.59E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
12	120974510	rs614226	C	T	rs614226	23028342	2.00E-06	NA	1.35	[1.19-1.54]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs614226-C
13	42933354	rs238271	T	C	rs238271	18978792	7.37E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
13	57565194	rs6561906	C	A	rs6561906	18978792	9.87E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
13	71983755	rs9318020	C	T	rs9318020	18978792	7.20E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
13	76326282	rs539514	A	T	rs539514	21980299	6.00E-11	NA	1.43	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
13	92941096	rs9523597	G	A	rs9523597	24595857	5.01E-04	NA	0.05	[0.02-0.08] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs9523597-A	Research Support, Non-U.S. Gov't
13	100073665	rs6491500	G	A	rs6491500	21980299	1.44E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	23840033	rs10137082	C	T	rs10137082	21980299	6.00E-06	NA	1.1	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	34728127	rs11625107	C	T	rs11625107	18978792	5.17E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	45256268	rs10483552	G	C	rs10483552	23028342	4.56E-05	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
14	45257347	rs10483551	A	G	rs10483551	23028342	9.73E-06	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
14	57221139	rs878889	G	A	rs878889	23028342	8.00E-07	NA	1.43	[1.24-1.65]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs878889-A
14	69258841	rs927292	C	G	rs927292	21980299	6.78E-07	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	69263599	rs1465788	T	C	rs1465788	19430480	2.00E-12	NA	1.16	[1.10-1.25]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
14	95306012	rs11624318	C	A	rs11624318	19875614	2.70E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
14	95306012	rs11624318	C	A	rs11624318	19875614	7.60E-06	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
14	95335491	rs11160219	A	G	rs11160219	19875614	3.40E-05	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
14	95335491	rs11160219	A	G	rs11160219	19875614	4.30E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
14	95337488	rs8007115	T	C	rs8007115	19875614	4.10E-05	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
14	95337488	rs8007115	T	C	rs8007115	19875614	5.40E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
14	98323343	rs1462275	C	T	rs1462275	18978792	5.80E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	98498951	rs4900384	A	G	rs4900384	19430480	4.00E-09	NA	1.09	[1.02-1.16]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs4900384-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
14	99475374	rs17098179	T	C	rs17098179	21980299	2.21E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	101120234	rs1018534	T	G	rs1018534	23028342	9.06E-05	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
14	101121274	rs1467537	T	C	rs1467537	23028342	2.42E-04	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
14	101306045	rs941576	A	G	rs941576	19966805	1.00E-10	NA	1.11	[1.06-1.16]	7,514 European ancestry cases; 9,045 European ancestry controls	European(16559)	ALL(16559)	EUR(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs941576-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
14	101306045	rs941576	A	G	rs941576	21980299	9.33E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
14	101589330	rs11623343	G	A	rs11623343	18978792	3.96E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	38838264	rs8035957	T	C	rs8035957	18840781	4.00E-06		1.14	[1.08-1.21]	563 cases; 1,146 controls; 483 case-parents trios	NOPOP(2192)	ALL(2192)	NOPOP(2192)	ALL(2192)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs8035957-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
15	38907041	rs7171171	A	G	rs7171171	21829393	2.00E-07	T1D	NA	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs7171171-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	38928677	rs12908309	G	A	rs12908309	21980299	4.31E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	53490262	rs493218	T	C	rs493218	19875614	2.40E-04	Glycated Hemoglobin SNP-treatment interaction (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
15	53490262	rs493218	T	C	rs493218	19875614	5.20E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
15	53490262	rs493218	T	C	rs493218	19875614	5.40E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
15	53504632	rs572221	G	A	rs572221	19875614	3.60E-04	Glycated Hemoglobin SNP-treatment interaction (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53504632	rs572221	G	A	rs572221	19875614	6.60E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53504632	rs572221	G	A	rs572221	19875614	6.80E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53508592	rs566369	A	G	rs566369	19875614	3.40E-04	Glycated Hemoglobin SNP-treatment interaction (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53508592	rs566369	A	G	rs566369	19875614	5.00E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53508592	rs566369	A	G	rs566369	19875614	5.10E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
15	53509194	rs482541	A	G	rs482541	19875614	3.40E-04	Glycated Hemoglobin SNP-treatment interaction (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
15	53509194	rs482541	A	G	rs482541	19875614	3.50E-07	Glycated Hemoglobin (HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
15	53509194	rs482541	A	G	rs482541	19875614	5.00E-07	Glycated Hemoglobin (repeated HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
15	53509194	rs482541	A	G	rs482541	19875614	5.10E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
15	53542745	rs529413	C	A	rs529413	18978792	9.50E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	79231478	rs12148472	T	C	rs12148472	21980299	2.37E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	79235446	rs3825932	T	C	rs3825932	18978792	3.00E-15	NA	1.16	[1.10-1.22]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs3825932-C	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	79235446	rs3825932	T	C	rs3825932	19430480	8.00E-08	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
15	87145842	rs2346733	A	G	rs2346733	18978792	5.09E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	87146081	rs2346734	A	G	rs2346734	18978792	6.54E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	87146118	rs2346735	G	C	rs2346735	18978792	1.80E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
15	94116764	rs17709163	A	G	rs17709163	23028342	1.19E-07	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
15	94141833	rs12437854	T	G	rs12437854	23028342	2.00E-09	NA	1.8	[1.48-2.17]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs12437854-G
16	11042194	rs12931878	A	G	rs12931878	17632545	2.90E-07	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	CLEC16A
16	11061997	rs12923849	G	A	rs12923849	17632545	3.43E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11062936	rs17229044	C	T	rs17229044	17632545	5.55E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	CLEC16A
16	11088808	rs13330041	G	A	rs13330041	17632545	6.80E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	CLEC16A
16	11169683	rs725613	T	G	rs725613	17632545	8.86E-11	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	CLEC16A
16	11174652	rs2041670	G	A	rs2041670	17632545	6.70E-10	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	T	CLEC16A
16	11177801	rs7200786	A	G	rs7200786	17632545	9.12E-07	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11179873	rs12708716	A	G	rs12708716	17554260	3.00E-18	NA	1.23	[1.16-1.30]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs12708716-A	Research Support, Non-U.S. Gov't	Validation Studies	A
16	11179873	rs12708716	A	G	rs12708716	17554300	5.00E-07	NA	1.19	[0.97-1.45]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs12708716-A	Multicenter Study	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't
16	11179873	rs12708716	A	G	rs12708716	18978792	7.00E-13	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs12708716-G	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	11179873	rs12708716	A	G	rs12708716	19430480	2.00E-16	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
16	11179873	rs12708716	A	G	rs12708716	21829393	5.00E-14	T1D	1.2	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs12708716-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
16	11187783	rs12924729	G	A	rs12924729	17632545	1.46E-08	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11189888	rs12599402	T	C	rs12599402	17632545	3.19E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	CLEC16A
16	11194771	rs12927355	C	T	rs12927355	21980299	1.91E-16	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	11199678	rs998592	C	T	rs998592	17632545	4.96E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11201428	rs9933507	T	C	rs9933507	17632545	2.66E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	C	CLEC16A
16	11203730	rs12103174	A	G	rs12103174	17632545	6.09E-06	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11238783	rs2903692	G	A	rs2903692	17632545	7.00E-11	NA	1.54	[1.32-1.79]	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2903692-G	Research Support, Non-U.S. Gov't	G	CLEC16A
16	11241906	rs17673553	A	G	rs17673553	17632545	2.74E-09	NA	NA	NA	467 trios; 561 cases; 1,143 controls	NOPOP(2171)	ALL(2171)	NOPOP(2171)	ALL(2171)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, Non-U.S. Gov't	A	CLEC16A
16	11319045	rs1646067	G	A	rs1646067	18978792	9.35E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	11345699	rs149310	G	C	rs149310	18978792	2.02E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	11364079	rs416603	A	T	rs416603	18978792	3.00E-06		1.06	[1.01-1.12]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs416603-T	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	11433103	rs7187741	G	C	rs7187741	18978792	1.68E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	20342572	rs12444268	T	A	rs12444268	19430480	2.00E-07	NA	1.1	[1.03-1.17]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs12444268-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
16	28539848	rs4788084	C	T	rs4788084	19430480	3.00E-13	NA	1.09	[1.02-1.16]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs4788084-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
16	28539848	rs4788084	C	T	rs4788084	21829393	1.00E-08	T1D	1.15	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs4788084-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
16	28568678	rs151320	C	T	rs151320	18978792	7.59E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	28586127	rs7193402	T	C	rs7193402	18978792	9.04E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	28591530	rs9924471	G	A	rs9924471	21980299	1.21E-11	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	65750752	rs17675333	A	G	rs17675333	18978792	3.87E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75247245	rs7202877	T	G	rs7202877	19430480	3.00E-15	NA	1.28	[1.17-1.41]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs7202877-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
16	75252327	rs8056814	G	A	rs8056814	21980299	1.13E-07	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75308899	rs6564245	C	T	rs6564245	18978792	5.26E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75343197	rs4536500	G	C	rs4536500	18978792	1.84E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75390532	rs9934007	T	C	rs9934007	18978792	3.31E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75411634	rs4993971	G	C	rs4993971	18978792	1.79E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75432649	rs247438	G	C	rs247438	18978792	6.54E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	75487758	rs8046416	T	C	rs8046416	18978792	4.98E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	77714205	rs11150012	G	A	rs11150012	18978792	2.18E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
16	86409801	rs4843366	A	C	rs4843366	18978792	3.21E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	4181122	rs733622	G	A	rs733622	18978792	9.19E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	4199284	rs2325988	A	G	rs2325988	18978792	5.16E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	4207243	rs7216130	T	A	rs7216130	18978792	8.86E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	4221236	rs2053255	A	G	rs2053255	18978792	8.39E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	4242178	rs8074770	G	A	rs8074770	18978792	5.80E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	7633692	rs16956936	C	T	rs16956936	18978792	5.08E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	7633692	rs16956936	C	T	rs16956936	19430480	5.00E-07	NA	1.09	[1.00-1.19]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
17	38025417	rs12150079	G	A	rs12150079	21980299	3.98E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	38040763	rs2872507	G	A	rs2872507	21829393	2.00E-06	T1D	1.1	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs2872507-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
17	38066240	rs2290400	T	C	rs2290400	19430480	6.00E-13	NA	1.15	[1.08-1.22]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
17	38757759	rs1358174	G	A	rs1358174	21980299	1.67E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	38770286	rs7221109	T	C	rs7221109	18978792	2.46E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	38770286	rs7221109	T	C	rs7221109	19430480	1.00E-09	NA	1.05	[0.99-1.12]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
17	44180954	rs17660595	A	G	rs17660595	18978792	6.95E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	44208144	rs17661428	C	G	rs17661428	18978792	6.46E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	44213204	rs542524111	C	T	rs12150320	18978792	3.88E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	50572240	rs12601816	C	T	rs12601816	18978792	6.80E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
17	50585822	rs16951546	T	C	rs16951546	18978792	9.04E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
18	12779947	rs2542151	G	T	rs2542151	17554260	1.00E-14	NA	1.3	[1.22-1.40]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2542151-C	Research Support, Non-U.S. Gov't	Validation Studies	T
18	12779947	rs2542151	G	T	rs2542151	18978792	9.00E-08	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2542151-C	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
18	12779947	rs2542151	G	T	rs2542151	21829393	4.00E-13	T1D	1.3	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs2542151-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
18	12809340	rs1893217	A	G	rs1893217	19430480	4.00E-15	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
18	12809340	rs1893217	A	G	rs1893217	21980299	1.63E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
18	24473742	rs163061	G	C	rs163061	19875614	9.70E-07	Glycated Hemoglobin (mean HbA1c) in Type 1 Diabetics	NA	NA	1304 European ancestry diabetics	European(1304)	ALL(1304)	EUR(1304)	ALL(1304)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
18	35844220	rs9948279	G	A	rs9948279	18978792	3.08E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
18	67519079	rs1790575	C	T	rs1790575	21980299	9.98E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
18	67531642	rs763361	T	C	rs763361	17554260	1.00E-08		1.16	[1.10-1.22]	1,963 cases; 2,938 controls	NOPOP(4901)	ALL(4901)	NOPOP(4901)	ALL(4901)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs763361-A	Research Support, Non-U.S. Gov't	Validation Studies	T
18	67531642	rs763361	T	C	rs763361	21829393	1.00E-09	T1D	1.12	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs763361-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	T
19	9202085	rs2053074	A	G	rs2053074	18978792	6.87E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
19	10475652	rs2304256	C	A	rs2304256	19966805	4.00E-09	NA	1.16	[1.11-1.22]	7,514 European ancestry cases; 9,045 European ancestry controls	European(16559)	ALL(16559)	EUR(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2304256-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
19	10475652	rs2304256	C	A	rs2304256	21829393	1.00E-10	T1D	NA	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
19	10577843	rs1051738	C	A	rs1051738	21980299	1.34E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
19	30877151	rs12462707	A	T	rs12462707	18978792	3.62E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
19	31960867	rs12973926	A	T	rs12973926	23028342	2.56E-04	NA	NA	NA	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	NA
19	47208481	rs425105	T	C	rs425105	19430480	3.00E-11	NA	1.16	[1.08-1.27]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
19	47276454	rs4804000	G	A	rs4804000	21980299	6.31E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
19	49206985	rs602662	G	A	rs602662	21980299	4.23E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
20	1610551	rs2281808	T	C	rs2281808	19430480	1.00E-11	NA	1.11	[1.05-1.19]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C,A
20	1666253	rs202536	C	G	rs202536	21980299	1.11E-06	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
20	31531544	rs13045180	C	T	rs13045180	23028342	9.00E-06	NA	1.28	[1.15-1.43]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs13045180-T
20	58895846	rs11698685	G	A	rs11698685	23028342	1.00E-06	NA	1.27	[1.15-1.39]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs11698685-G
20	58896715	rs6027506	A	G	rs6027506	23028342	5.00E-06	NA	1.22	[1.12-1.32]	Up to 2,916 European ancestry Type 1 Diabetes cases with nephropathy; 3,315 European ancestry Type 1 Diabetes cases without nephropathy	European(6231)	ALL(6231)	EUR(6231)	ALL(6231)	Type 1 diabetes nephropathy	HPOID:0100651	Type I diabetes mellitus	DOID:9744	DOID:2370	type 1 diabetes mellitus	diabetic nephropathy	D003928	Diabetic Nephropathies	EFOID:0004996	type 1 diabetes nephropathy	Kidney disease	Diabetes mellitus	rs6027506-A
21	16424421	rs2823025	A	G	rs2823025	18978792	6.38E-06	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
21	38466937	rs2835599	G	T	rs2835599	24595857	2.19E-04	NA	0.05	[0.02-0.07] unit increase	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs2835599-T	Research Support, Non-U.S. Gov't
21	43836186	rs11203203	G	A	rs11203203	19430480	2.00E-09	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A
21	43836186	rs11203203	G	A	rs11203203	21980299	1.44E-07	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
21	43836390	rs9976767	A	G	rs9976767	18840781	2.00E-08		1.16	[1.10-1.22]	563 cases; 1,146 controls; 483 case-parents trios	NOPOP(2192)	ALL(2192)	NOPOP(2192)	ALL(2192)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs9976767-C	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
21	43841328	rs3788013	C	A	rs3788013	21829393	1.00E-07	T1D	1.1	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs3788013-A	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	A,C
21	46739353	rs2838873	C	T	rs2838873	21980299	1.22E-05	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30432403	rs41176	C	A	rs41176	18978792	2.26E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30472254	rs1989870	G	A	rs1989870	18978792	3.01E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30486826	rs2412970	A	G	rs2412970	21980299	3.76E-04	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30504652	rs5763779	A	G	rs5763779	18978792	1.86E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30531091	rs4820830	C	T	rs4820830	18978792	2.34E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30567907	rs2412976	C	G	rs2412976	18978792	2.09E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	30581722	rs5753037	C	T	rs5753037	19430480	3.00E-16	NA	1.1	[1.04-1.17]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs5753037-T	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
22	37551607	rs743777	A	G	rs743777	21829393	2.00E-06	T1D	1.1	NA	12,501 European ancestry cases	European(12501)	ALL(12501)	EUR(12501)	ALL(12501)	Type 1 diabetes autoantibodies	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0004866	type i diabetes mellitus	Diabetes mellitus	rs743777-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G
22	37554839	rs229484	C	G	rs229484	19966805	3.59E-06	NA	NA	NA	7,514 European ancestry cases; 9,045 European ancestry controls	European(16559)	ALL(16559)	EUR(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
22	37581422	rs229526	G	C	rs229526	21980299	8.33E-08	NA	NA	NA	9,934 European ancestry cases; 16,956 European ancestry controls	European(26890)	ALL(26890)	EUR(26890)	ALL(26890)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	37591290	rs229540	T	G	rs229540	18978792	2.28E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	37591318	rs229541	G	A	rs229541	18978792	2.00E-08	NA	1.11	[1.05-1.16]	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs229541-T	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
22	37591318	rs229541	G	A	rs229541	19430480	2.00E-07	NA	NA	NA	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	C
22	44768559	rs2097443	C	T	rs2097443	24595857	3.82E-05	NA	0.28	[0.14-0.41] unit decrease	1,925 European ancestry cases	European(1925)	ALL(1925)	EUR(1925)	ALL(1925)	Urinary albumin excretion rate in type 1 diabetes	HPOID:0000079	HPOID:0100651	Abnormality of the urinary system	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	NA	NA	NA	NA	Diabetes mellitus	rs2097443-T	Research Support, Non-U.S. Gov't
X	12971524	rs5979785	C	T	rs5979785	18978792	4.33E-05	NA	NA	NA	3,561 cases; 4,646 controls	NOPOP(8207)	ALL(8207)	NOPOP(8207)	ALL(8207)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	NA	Research Support, N.I.H., Extramural	Meta-Analysis	Research Support, Non-U.S. Gov't
X	153945602	rs2664170	G	A	rs2664170	19430480	8.00E-09	NA	1.16	[1.07-1.24]	7,514 cases; 9,045 controls	NOPOP(16559)	ALL(16559)	NOPOP(16559)	ALL(16559)	Type 1 diabetes	HPOID:0100651	Type I diabetes mellitus	DOID:9744	type 1 diabetes mellitus	D003922	Diabetes Mellitus, Type 1	EFOID:0001359	type i diabetes mellitus	Diabetes mellitus	rs2664170-G	Research Support, N.I.H., Extramural	Research Support, Non-U.S. Gov't	G

Mapped by lexical matching(Total Items:0)
(Waiting for update.)

Mapped by homologous gene(Total Items:0)
(Waiting for update.)

Chemical(Total Drugs:7)
CUI	ChemicalName	ChemicalID	CasRN	DiseaseName	DiseaseID	DirectEvidence	PubMedIDs
C0011854	cyclophosphamide	D003520	50-18-0	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	18772604
C0011854	calcitriol	D002117	32222-06-3	diabetes mellitus, type 1	MESH:D003922	therapeutic	11250657
C0011854	nitric oxide	D009569	10102-43-9	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	10698259
C0011854	norepinephrine	D009638	51-41-2	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	6735272
C0011854	streptozocin	D013311	18883-66-4	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	14594557
C0011854	tacrolimus	D016559	109581-93-3	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	10743694
C0011854	vitamin a	D014801	11103-57-4	diabetes mellitus, type 1	MESH:D003922	marker/mechanism	16506275

FDA approved drug and dosage information(Total Drugs:0)
(Waiting for update.)

FDA labeling changes(Total Drugs:0)
(Waiting for update.)