PedAM

Pediatric Disease Annotations & Medicines


	cleft lip

Disease ID	655
Disease	cleft lip
Definition	Congenital defect in the upper lip where the maxillary prominence fails to merge with the merged medial nasal prominences. It is thought to be caused by faulty migration of the mesoderm in the head region.
Synonym	cheiloschisis cheiloschisis of upper lip cl - cleft lip cleft lip (disorder) cleft lip [disease/finding] cleft lip nos cleft lip nos (disorder) cleft lip, nos cleft lip, unspecified cleft lip, unspecified (disorder) cleft lips cleft of upper lip cleft upper lip congenital fissure of lip hare lip harelip harelips labium leporinum lip cleft lip, cleft lips, cleft
DOID	DOID:9296
UMLS	C0008924
MeSH	D002971
SNOMED-CT	SNOMEDCT_US_2016_09_01:80281008
Comorbidity	UMLS \| Disease \| Sentences' Count(Total Sentences:29) C0008925 \| cleft palate \| 332 C0011334 \| caries \| 7 C0011334 \| dental caries \| 5 C0520679 \| obstructive sleep apnea \| 2 C0037315 \| sleep apnea \| 2 C0017572 \| gingival recession \| 2 C0028754 \| obesity \| 1 C0008373 \| cholesteatoma \| 1 C0037886 \| sphenoid sinusitis \| 1 C0043008 \| waardenburg syndrome \| 1 C0175702 \| williams' syndrome \| 1 C0259779 \| fibrous dysplasia \| 1 C0037199 \| sinusitis \| 1 C0006142 \| breast cancer \| 1 C0018799 \| heart disease \| 1 C0080178 \| spina bifida \| 1 C0018916 \| hemangioma \| 1 C0022679 \| cystic kidney \| 1 C0812437 \| oculodentodigital dysplasia \| 1 C0152227 \| epiphora \| 1 C0221026 \| x-linked agammaglobulinemia \| 1 C0002766 \| analgesia \| 1 C0242172 \| pelvic inflammatory disease \| 1 C0003467 \| anxiety \| 1 C0162809 \| kallmann syndrome \| 1 C0031106 \| aggressive periodontitis \| 1 C0266463 \| lissencephaly \| 1 C0175702 \| williams syndrome \| 1 C0034012 \| delayed puberty \| 1
Curated Gene	Entrez_id \| Symbol \| Resource(Total Genes:26) NOS3 \| 4846 \| CTD_human FGFR1 \| 2260 \| CTD_human MYC \| 4609 \| CTD_human FGFR2 \| 2263 \| CTD_human TYMS \| 7298 \| CTD_human TCN2 \| 6948 \| CTD_human MTHFR \| 4524 \| CTD_human TP63 \| 8626 \| CTD_human FGFR3 \| 2261 \| CTD_human IRF6 \| 3664 \| CTD_human THAS \| 7055 \| CTD_human SLC19A1 \| 6573 \| CTD_human MAFB \| 9935 \| CTD_human PTCH1 \| 5727 \| CTD_human FGF8 \| 2253 \| CTD_human MTR \| 4548 \| CTD_human FGF2 \| 2247 \| CTD_human FGF3 \| 2248 \| CTD_human SUMO1 \| 7341 \| CTD_human FGF7 \| 2252 \| CTD_human ABCA4 \| 24 \| CTD_human SPRY2 \| 10253 \| CTD_human FGF10 \| 2255 \| CTD_human FGF9 \| 2254 \| CTD_human BHMT2 \| 23743 \| CTD_human MTHFS \| 10588 \| CTD_human
Inferring Gene	Entrez_id \| Symbol \| Resource(Total Genes:15) 162282 \| ANKFN1 \| infer 654 \| BMP6 \| infer 9244 \| CRLF1 \| infer 2272 \| FHIT \| infer 26585 \| GREM1 \| infer 2917 \| GRM7 \| infer 3664 \| IRF6 \| infer 55295 \| KLHL26 \| infer 4524 \| MTHFR \| infer 54602 \| NDFIP2 \| infer 9241 \| NOG \| infer 5820 \| PVT1 \| infer 342808 \| RPS2P6 \| infer 7039 \| TGFA \| infer 63892 \| THADA \| infer
Text Mined Gene	Entrez_id \| Symbol \| Score \| Resource(Total Genes:396) 137196 \| CCDC26 \| DISEASES 1856 \| DVL2 \| DISEASES 53615 \| MBD3 \| DISEASES 602 \| BCL3 \| DISEASES 2249 \| FGF4 \| DISEASES 9423 \| NTN1 \| DISEASES 1947 \| EFNB1 \| DISEASES 54187 \| NANS \| DISEASES 57715 \| SEMA4G \| DISEASES 266 \| AMELY \| DISEASES 6634 \| SNRPD3 \| DISEASES 6948 \| TCN2 \| DISEASES 25776 \| CBY1 \| DISEASES 4627 \| MYH9 \| DISEASES 140733 \| MACROD2 \| DISEASES 128674 \| PROKR2 \| DISEASES 203427 \| SLC25A43 \| DISEASES 3163 \| HMOX2 \| DISEASES 10404 \| CPQ \| DISEASES 1749 \| DLX5 \| DISEASES 3199 \| HOXA2 \| DISEASES 1124 \| CHN2 \| DISEASES 55131 \| RBM28 \| DISEASES 165 \| AEBP1 \| DISEASES 657 \| BMPR1A \| DISEASES 7473 \| WNT3 \| DISEASES 30851 \| TAX1BP3 \| DISEASES 9570 \| GOSR2 \| DISEASES 4619 \| MYH1 \| DISEASES 4621 \| MYH3 \| DISEASES 51522 \| TMEM14C \| DISEASES 8440 \| NCK2 \| DISEASES 7475 \| WNT6 \| DISEASES 1746 \| DLX2 \| DISEASES 25806 \| VAX2 \| DISEASES 9068 \| ANGPTL1 \| DISEASES 6543 \| SLC8A2 \| DISEASES 7141 \| TNP1 \| DISEASES 7043 \| TGFB3 \| DISEASES 4488 \| MSX2 \| DISEASES 63923 \| TNN \| DISEASES 5533 \| PPP3CC \| DISEASES 1748 \| DLX4 \| DISEASES 130399 \| ACVR1C \| DISEASES 6615 \| SNAI1 \| DISEASES 8339 \| HIST1H2BG \| DISEASES 81578 \| COL21A1 \| DISEASES 652 \| BMP4 \| DISEASES 8192 \| CLPP \| DISEASES 10893 \| MMP24 \| DISEASES 2952 \| GSTT1 \| DISEASES 79148 \| MMP28 \| DISEASES 64428 \| NARFL \| DISEASES 445 \| ASS1 \| DISEASES 55902 \| ACSS2 \| DISEASES 56033 \| BARX1 \| DISEASES 5914 \| RARA \| DISEASES 85415 \| RHPN2 \| DISEASES 29958 \| DMGDH \| DISEASES 23743 \| BHMT2 \| DISEASES 4622 \| MYH4 \| DISEASES 10400 \| PEMT \| DISEASES 6947 \| TCN1 \| DISEASES 80896 \| NPL \| DISEASES 3915 \| LAMC1 \| DISEASES 80326 \| WNT10A \| DISEASES 55997 \| CFC1 \| DISEASES 9394 \| HS6ST1 \| DISEASES 55363 \| HEMGN \| DISEASES 2295 \| FOXF2 \| DISEASES 1208 \| CLPS \| DISEASES 9982 \| FGFBP1 \| DISEASES 51050 \| PI15 \| DISEASES 9411 \| ARHGAP29 \| DISEASES 6496 \| SIX3 \| DISEASES 23314 \| SATB2 \| DISEASES 1295 \| COL8A1 \| DISEASES 55728 \| N4BP2 \| DISEASES 7782 \| SLC30A4 \| DISEASES 83690 \| CRISPLD1 \| DISEASES 79784 \| MYH14 \| DISEASES 1387 \| CREBBP \| DISEASES 83716 \| CRISPLD2 \| DISEASES 7077 \| TIMP2 \| DISEASES 25939 \| SAMHD1 \| DISEASES 10133 \| OPTN \| DISEASES 1 \| A1BG \| DISEASES 8424 \| BBOX1 \| DISEASES 7290 \| HIRA \| DISEASES 9014 \| TAF1B \| DISEASES 5593 \| PRKG2 \| DISEASES 658 \| BMPR1B \| DISEASES 7474 \| WNT5A \| DISEASES 2255 \| FGF10 \| DISEASES 4552 \| MTRR \| DISEASES 8626 \| TP63 \| DISEASES 2162 \| F13A1 \| DISEASES 2121 \| EVC \| DISEASES 80321 \| CEP70 \| DISEASES 51176 \| LEF1 \| DISEASES 1119 \| CHKA \| DISEASES 55500 \| ETNK1 \| DISEASES 55266 \| TMEM19 \| DISEASES 2065 \| ERBB3 \| DISEASES 7168 \| TPM1 \| DISEASES 3394 \| IRF8 \| DISEASES 6687 \| SPG7 \| DISEASES 10907 \| TXNL4A \| DISEASES 29985 \| SLC39A3 \| DISEASES 10055 \| SAE1 \| DISEASES 8915 \| BCL10 \| DISEASES 64129 \| TINAGL1 \| DISEASES 10262 \| SF3B4 \| DISEASES 10637 \| LEFTY1 \| DISEASES 2052 \| EPHX1 \| DISEASES 130589 \| GALM \| DISEASES 7851 \| MALL \| DISEASES 635 \| BHMT \| DISEASES 2559 \| GABRA6 \| DISEASES 8817 \| FGF18 \| DISEASES 4851 \| NOTCH1 \| DISEASES 2895 \| GRID2 \| DISEASES 55351 \| STK32B \| DISEASES 64795 \| RMND5A \| DISEASES 89780 \| WNT3A \| DISEASES 4645 \| MYO5B \| DISEASES 220134 \| SKA1 \| DISEASES 4838 \| NODAL \| DISEASES 23522 \| KAT6B \| DISEASES 9530 \| BAG4 \| DISEASES 26060 \| APPL1 \| DISEASES 57822 \| GRHL3 \| DISEASES 90737 \| PAGE5 \| DISEASES 7484 \| WNT9B \| DISEASES 5130 \| PCYT1A \| DISEASES 7471 \| WNT1 \| DISEASES 115 \| ADCY9 \| DISEASES 431707 \| LHX8 \| DISEASES 51127 \| TRIM17 \| DISEASES 7039 \| TGFA \| DISEASES 60675 \| PROK2 \| DISEASES 23380 \| SRGAP2 \| DISEASES 152926 \| PPM1K \| DISEASES 57619 \| SHROOM3 \| DISEASES 6259 \| RYK \| DISEASES 3693 \| ITGB5 \| DISEASES 5648 \| MASP1 \| DISEASES 6469 \| SHH \| DISEASES 2020 \| EN2 \| DISEASES 116039 \| OSR2 \| DISEASES 81034 \| SLC25A32 \| DISEASES 79937 \| CNTNAP3 \| DISEASES 203286 \| ANKS6 \| DISEASES 9317 \| PTER \| DISEASES 2562 \| GABRB3 \| DISEASES 4314 \| MMP3 \| DISEASES 26585 \| GREM1 \| DISEASES 125336 \| LOXHD1 \| DISEASES 7480 \| WNT10B \| DISEASES 83595 \| SOX7 \| DISEASES 81603 \| TRIM8 \| DISEASES 4807 \| NHLH1 \| DISEASES 8313 \| AXIN2 \| DISEASES 2850 \| GPR27 \| DISEASES 378 \| ARF4 \| DISEASES 11162 \| NUDT6 \| DISEASES 157570 \| ESCO2 \| DISEASES 9915 \| ARNT2 \| DISEASES 2348 \| FOLR1 \| DISEASES 10238 \| DCAF7 \| DISEASES 170959 \| ZNF431 \| DISEASES 2733 \| GLE1 \| DISEASES 6573 \| SLC19A1 \| DISEASES 1444 \| CSHL1 \| DISEASES 7015 \| TERT \| DISEASES 27173 \| SLC39A1 \| DISEASES 3265 \| HRAS \| DISEASES 2944 \| GSTM1 \| DISEASES 4281 \| MID1 \| DISEASES 57560 \| IFT80 \| DISEASES 81037 \| CLPTM1L \| DISEASES 2907 \| GRINA \| DISEASES 57539 \| WDR35 \| DISEASES 23382 \| AHCYL2 \| DISEASES 138009 \| DCAF4L2 \| DISEASES 55349 \| CHDH \| DISEASES 124590 \| USH1G \| DISEASES 137814 \| NKX2-6 \| DISEASES 2193 \| FARSA \| DISEASES 6867 \| TACC1 \| DISEASES 50628 \| GEMIN4 \| DISEASES 8347 \| HIST1H2BC \| DISEASES 2253 \| FGF8 \| DISEASES 26005 \| C2CD3 \| DISEASES 8100 \| IFT88 \| DISEASES 8774 \| NAPG \| DISEASES 5520 \| PPP2R2A \| DISEASES 7481 \| WNT11 \| DISEASES 23384 \| SPECC1L \| DISEASES 3052 \| HCCS \| DISEASES 9015 \| TAF1A \| DISEASES 10473 \| HMGN4 \| DISEASES 3714 \| JAG2 \| DISEASES 9241 \| NOG \| DISEASES 9074 \| CLDN6 \| DISEASES 246329 \| STAC3 \| DISEASES 10945 \| KDELR1 \| DISEASES 255324 \| EPGN \| DISEASES 9573 \| GDF3 \| DISEASES 6899 \| TBX1 \| DISEASES 2049 \| EPHB3 \| DISEASES 220 \| ALDH1A3 \| DISEASES 5727 \| PTCH1 \| DISEASES 54101 \| RIPK4 \| DISEASES 25830 \| SULT4A1 \| DISEASES 9939 \| RBM8A \| DISEASES 2248 \| FGF3 \| DISEASES 347853 \| TBX10 \| DISEASES 25788 \| RAD54B \| DISEASES 1209 \| CLPTM1 \| DISEASES 64386 \| MMP25 \| DISEASES 11133 \| KPTN \| DISEASES 6622 \| SNCA \| DISEASES 9369 \| NRXN3 \| DISEASES 2246 \| FGF1 \| DISEASES 2290 \| FOXG1 \| DISEASES 1368 \| CPM \| DISEASES 78989 \| COLEC11 \| DISEASES 10249 \| GLYAT \| DISEASES 3720 \| JARID2 \| DISEASES 93099 \| DMKN \| DISEASES 7743 \| ZNF189 \| DISEASES 132884 \| EVC2 \| DISEASES 2138 \| EYA1 \| DISEASES 10252 \| SPRY1 \| DISEASES 55269 \| PSPC1 \| DISEASES 8481 \| OFD1 \| DISEASES 1499 \| CTNNB1 \| DISEASES 875 \| CBS \| DISEASES 89944 \| GLB1L2 \| DISEASES 11259 \| FILIP1L \| DISEASES 4635 \| MYL4 \| DISEASES 50618 \| ITSN2 \| DISEASES 81553 \| FAM49A \| DISEASES 8871 \| SYNJ2 \| DISEASES 91687 \| CENPL \| DISEASES 219844 \| HYLS1 \| DISEASES 6231 \| RPS26 \| DISEASES 8344 \| HIST1H2BE \| DISEASES 151987 \| PPP4R2 \| DISEASES 3663 \| IRF5 \| DISEASES 1297 \| COL9A1 \| DISEASES 23133 \| PHF8 \| DISEASES 26052 \| DNM3 \| DISEASES 8323 \| FZD6 \| DISEASES 23607 \| CD2AP \| DISEASES 8822 \| FGF17 \| DISEASES 8343 \| HIST1H2BF \| DISEASES 84436 \| ZNF528 \| DISEASES 10319 \| LAMC3 \| DISEASES 1745 \| DLX1 \| DISEASES 23499 \| MACF1 \| DISEASES 2736 \| GLI2 \| DISEASES 56853 \| CELF4 \| DISEASES 5083 \| PAX9 \| DISEASES 4548 \| MTR \| DISEASES 7044 \| LEFTY2 \| DISEASES 23219 \| FBXO28 \| DISEASES 7042 \| TGFB2 \| DISEASES 7779 \| SLC30A1 \| DISEASES 3664 \| IRF6 \| DISEASES 50486 \| G0S2 \| DISEASES 56995 \| TULP4 \| DISEASES 25902 \| MTHFD1L \| DISEASES 9191 \| DEDD \| DISEASES 56893 \| UBQLN4 \| DISEASES 2444 \| FRK \| DISEASES 4184 \| SMCP \| DISEASES 11023 \| VAX1 \| DISEASES 9659 \| PDE4DIP \| DISEASES 167681 \| PRSS35 \| DISEASES 257 \| ALX3 \| DISEASES 51750 \| RTEL1 \| DISEASES 24 \| ABCA4 \| DISEASES 6125 \| RPL5 \| DISEASES 2258 \| FGF13 \| DISEASES 653 \| BMP5 \| DISEASES 9124 \| PDLIM1 \| DISEASES 860 \| RUNX2 \| DISEASES 11124 \| FAF1 \| DISEASES 10585 \| POMT1 \| DISEASES 128209 \| KLF17 \| DISEASES 25844 \| YIPF3 \| DISEASES 22845 \| DOLK \| DISEASES 55315 \| SLC29A3 \| DISEASES 50945 \| TBX22 \| DISEASES 9935 \| MAFB \| DISEASES 113452 \| TMEM54 \| DISEASES 254956 \| MORN5 \| DISEASES 54836 \| BSPRY \| DISEASES 1317 \| SLC31A1 \| DISEASES 1741 \| DLG3 \| DISEASES 1302 \| COL11A2 \| DISEASES 7046 \| TGFBR1 \| DISEASES 2304 \| FOXE1 \| DISEASES 5081 \| PAX7 \| DISEASES 171023 \| ASXL1 \| DISEASES 4920 \| ROR2 \| DISEASES 283078 \| MKX \| DISEASES 5095 \| PCCA \| DISEASES 7546 \| ZIC2 \| DISEASES 4524 \| MTHFR \| DISEASES 266722 \| HS6ST3 \| DISEASES 10253 \| SPRY2 \| DISEASES 8928 \| FOXH1 \| DISEASES 728577 \| CNTNAP3B \| DISEASES 8346 \| HIST1H2BI \| DISEASES 3980 \| LIG3 \| DISEASES 83889 \| WDR87 \| DISEASES 285440 \| CYP4V2 \| DISEASES 650 \| BMP2 \| DISEASES 5422 \| POLA1 \| DISEASES 5080 \| PAX6 \| DISEASES 7020 \| TFAP2A \| DISEASES 241 \| ALOX5AP \| DISEASES 1280 \| COL2A1 \| DISEASES 265 \| AMELX \| DISEASES 8110 \| DPF3 \| DISEASES 2254 \| FGF9 \| DISEASES 4487 \| MSX1 \| DISEASES 9811 \| CTIF \| DISEASES 9901 \| SRGAP3 \| DISEASES 56953 \| NT5M \| DISEASES 283659 \| PRTG \| DISEASES 80070 \| ADAMTS20 \| DISEASES 5077 \| PAX3 \| DISEASES 54499 \| TMCO1 \| DISEASES 7341 \| SUMO1 \| DISEASES 23023 \| TMCC1 \| DISEASES 10840 \| ALDH1L1 \| DISEASES 26269 \| FBXO8 \| DISEASES 374654 \| KIF7 \| DISEASES 87 \| ACTN1 \| DISEASES 174 \| AFP \| DISEASES 64924 \| SLC30A5 \| DISEASES 79659 \| DYNC2H1 \| DISEASES 4905 \| NSF \| DISEASES 1394 \| CRHR1 \| DISEASES 4356 \| MPP3 \| DISEASES 5075 \| PAX1 \| DISEASES 7478 \| WNT8A \| DISEASES 3166 \| HMX1 \| DISEASES 4626 \| MYH8 \| DISEASES 55120 \| FANCL \| DISEASES 202018 \| TAPT1 \| DISEASES 151126 \| ZNF385B \| DISEASES 26115 \| TANC2 \| DISEASES 255928 \| SYT14 \| DISEASES 1747 \| DLX3 \| DISEASES 55636 \| CHD7 \| DISEASES 2260 \| FGFR1 \| DISEASES 3550 \| IK \| DISEASES 64065 \| PERP \| DISEASES 26013 \| L3MBTL1 \| DISEASES 6635 \| SNRPE \| DISEASES 5817 \| PVR \| DISEASES 339829 \| CCDC39 \| DISEASES 54845 \| ESRP1 \| DISEASES 3612 \| IMPA1 \| DISEASES 221833 \| SP8 \| DISEASES 2263 \| FGFR2 \| DISEASES 2257 \| FGF12 \| DISEASES 286046 \| XKR6 \| DISEASES 80004 \| ESRP2 \| DISEASES 27042 \| DIEXF \| DISEASES 23429 \| RYBP \| DISEASES 266553 \| OFCC1 \| DISEASES 6949 \| TCOF1 \| DISEASES 56034 \| PDGFC \| DISEASES 4750 \| NEK1 \| DISEASES 1750 \| DLX6 \| DISEASES 2053 \| EPHX2 \| DISEASES 4147 \| MATN2 \| DISEASES 996 \| CDC27 \| DISEASES 83695 \| RHNO1 \| DISEASES 8615 \| USO1 \| DISEASES 27164 \| SALL3 \| DISEASES 4522 \| MTHFD1 \| DISEASES 4212 \| MEIS2 \| DISEASES 9063 \| PIAS2 \| DISEASES 148206 \| ZNF714 \| DISEASES 57000 \| GSN-AS1 \| DISEASES 283553 \| LINC00640 \| DISEASES 100169750 \| PRINS \| DISEASES 7955 \| RNF217-AS1 \| DISEASES 677769 \| SCARNA17 \| DISEASES
Locus	(Waiting for update.)

Disease ID	655
Disease	cleft lip
Integrated Phenotype	(Waiting for update.)
Text Mined Phenotype	HPO \| Name \| Sentences' Count(Total Phenotypes:67) HP:0000175 \| Palatoschisis \| 332 HP:0000327 \| Maxillary micrognathia \| 16 HP:0000164 \| Abnormality of the teeth \| 10 HP:0000670 \| Dental caries \| 7 HP:0000220 \| Velopharyngeal insufficiency \| 3 HP:0000202 \| Oral clefting \| 3 HP:0000689 \| Misalignment of upper and lower dental arches \| 3 HP:0030816 \| Gum recession \| 2 HP:0000324 \| Asymmetry of face \| 2 HP:0012531 \| Pain \| 2 HP:0002104 \| Absence of spontaneous respiration \| 2 HP:0010535 \| Sleep apnea \| 2 HP:0012806 \| Proboscis \| 2 HP:0100267 \| Lip pit \| 2 HP:0002870 \| Obstructive sleep apnea \| 2 HP:0002010 \| Transverse hypoplasia of maxilla \| 2 HP:0000078 \| Genital abnormalities \| 2 HP:0002006 \| Tessier facial cleft \| 2 HP:0100257 \| Cleft hand \| 2 HP:0011800 \| Midface, flat \| 2 HP:0003196 \| Short nose \| 1 HP:0000196 \| Lower lip pit \| 1 HP:0000470 \| Decreased cervical height \| 1 HP:0001513 \| Obesity \| 1 HP:0100731 \| Tessier facial cleft number 8 \| 1 HP:0000201 \| Pierre-robin deformity \| 1 HP:0000668 \| Failure of development of between one and six teeth \| 1 HP:0009932 \| Single naris \| 1 HP:0003002 \| Breast carcinoma \| 1 HP:0001360 \| Single brain ventricle \| 1 HP:0001839 \| Foot ectrodactyly \| 1 HP:0003256 \| Coagulopathy \| 1 HP:0000233 \| Decreased volume of lip vermillion \| 1 HP:0006888 \| Meningoencephalocele \| 1 HP:0001750 \| Single ventricle \| 1 HP:0001627 \| Congenital heart defects \| 1 HP:0000969 \| Dropsy \| 1 HP:0000679 \| Taurodont \| 1 HP:0011069 \| Extra teeth \| 1 HP:0010442 \| Polydactyly \| 1 HP:0001999 \| Facial dysmorphism \| 1 HP:0000823 \| Pubertal delay \| 1 HP:0000365 \| Hearing impairment \| 1 HP:0006870 \| Lobar holoprosencephaly \| 1 HP:0010772 \| Anomalous pulmonary venous return \| 1 HP:0000739 \| Anxiety \| 1 HP:0005160 \| Total anomalous pulmonary venous return \| 1 HP:0000246 \| Sinus inflammation \| 1 HP:0000695 \| Natal teeth \| 1 HP:0001510 \| Growth deficiency \| 1 HP:0045005 \| Neural tube defect \| 1 HP:0001028 \| Strawberry mark \| 1 HP:0001339 \| Lissencephaly \| 1 HP:0003191 \| Notched nasal alae \| 1 HP:0002414 \| Spina bifida \| 1 HP:0001651 \| Thoracic situs inversus \| 1 HP:0009027 \| Foot drop \| 1 HP:0002804 \| Arthrogryposis multiplex congenita \| 1 HP:0000463 \| Nostrils anteverted \| 1 HP:0009926 \| Epiphora \| 1 HP:0009797 \| Cholesteatoma \| 1 HP:0000568 \| Abnormally small globe of eye \| 1 HP:0011755 \| Ectopic posterior pituitary \| 1 HP:0002085 \| Occipital encephalocele \| 1 HP:0010296 \| Ankyloglossia \| 1 HP:0002167 \| Speech disorder \| 1 HP:0009099 \| Central cleft palate \| 1

Disease ID	655
Disease	cleft lip
Manually Symptom	(Waiting for update.)
Text Mined Symptom	UMLS \| Name \| Sentences' Count(Total Symptoms:7) C0011334 \| dental caries \| 5 C0264614 \| hypernasality \| 2 C1384666 \| hearing loss \| 2 C0040437 \| tooth eruption \| 1 C0260662 \| hearing disorders \| 1 C0037199 \| sinusitis \| 1 C0002766 \| analgesia \| 1

Manually Genotype(Total Text Mining Genotypes:0)
(Waiting for update.)

All Snps(Total Genotypes:29)
snpId	pubmedId	geneId	geneSymbol	diseaseId	sourceId	sentence	score	Year	geneSymbol_dbSNP	CHROMOSOME	POS	REF	ALT
rs10863790	20436469	3664	IRF6	umls:C0008924	GAD	[SNPs near two genes not previously associated with cleft lip with and without cleft palate (MAFB, most significant SNP rs13041247, with odds ratio (OR) per minor allele = 0.704, 95% CI 0.635-0.778, P = 1.44 x 10(-11); and ABCA4, most significant SNP rs560426, with OR = 1.432, 95% CI 1.292-1.587, P = 5.01 x 10(-12)) and two previously identified regions (at chromosome 8q24 and IRF6) attained genome-wide significance.]	0.172755664	2010	NA	1	209814702	A	C
rs12532	21689018	4487	MSX1	umls:C0008924	BeFree	No significant association was found between NSOC and rs3821949 or rs12532 in MSX1 gene, whereas an association was observed between the P147Q variant and cleft lip with cleft palate in the case-control analysis.	0.03718245	2011	MSX1	4	4863419	A	G
rs1258763	20023658	26585	GREM1	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	NA	15	32758222	C	T
rs13041247	20436469	3664	IRF6	umls:C0008924	BeFree	SNPs near two genes not previously associated with cleft lip with and without cleft palate (MAFB, most significant SNP rs13041247, with odds ratio (OR) per minor allele = 0.704, 95% CI 0.635-0.778, P = 1.44 x 10(-11); and ABCA4, most significant SNP rs560426, with OR = 1.432, 95% CI 1.292-1.587, P = 5.01 x 10(-12)) and two previously identified regions (at chromosome 8q24 and IRF6) attained genome-wide significance.	0.172755664	2010	NA	20	40640434	T	C
rs1450100	22419666	2917	GRM7	umls:C0008924	GAD	[Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.]	0.002367032	2012	GRM7	3	7496515	T	G
rs16430	23404871	7298	TYMS	umls:C0008924	BeFree	We investigated two TYMS functional variants (a 28-bp tandem repeat in the promoter enhancer region of the 5'-UTR; and TYMS 1494del6 (rs16430): a 6-bp deletion in the 3'-UTR) for their risk of cleft palate (CP) and of cleft lip with/without CP (CLP).	0.122638474	2013	NA	NA	NA	NA	NA
rs17760296	20023658	162282	ANKFN1	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	LOC105371834	17	56538256	T	G
rs1810132	18978678	2064	ERBB2	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	ERBB2	17	39709752	C	T
rs2068361	22419666	654	BMP6	umls:C0008924	GAD	[Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.]	0.002367032	2012	BMP6	6	7736510	C	T
rs212016	22419666	2272	FHIT	umls:C0008924	GAD	[Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.]	0.002367032	2012	FHIT	3	59995799	T	C
rs221430	18978678	9369	NRXN3	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	NRXN3;LOC105370583	14	79601778	T	C
rs2215502	18978678	1000	CDH2	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	NA	18	28204055	T	C
rs2235371	19780991	3664	IRF6	umls:C0008924	BeFree	Lack of association between IRF6 polymorphisms (rs2235371 and rs642961) and non-syndromic cleft lip and/or palate in a Brazilian population.	0.172755664	2010	IRF6	1	209790735	C	T
rs2235371	19115793	3664	IRF6	umls:C0008924	BeFree	Association analysis between the IRF6 G820A polymorphism and nonsyndromic cleft lip and/or cleft palate in a Chinese population.	0.172755664	2009	IRF6	1	209790735	C	T
rs227731	20023658	9241	NOG	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	NA	17	56695877	T	G
rs2536143	18978678	8110	DPF3	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	DPF3	14	72718325	A	T
rs28999109	19092777	56034	PDGFC	umls:C0008924	GAD	[The PDGF-C regulatory region SNP rs28999109 decreases promoter transcriptional activity and is associated with CL/P.]	0.002638474	2009	PDGFC	4	156971889	G	A
rs3764628	22419666	55295	KLHL26	umls:C0008924	GAD	[Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.]	0.002367032	2012	KLHL26	19	18636795	G	T
rs3764628	22419666	9244	CRLF1	umls:C0008924	GAD	[Genome wide study of maternal and parent-of-origin effects on the etiology of orofacial clefts.]	0.002367032	2012	KLHL26	19	18636795	G	T
rs3821949	21689018	4487	MSX1	umls:C0008924	BeFree	No significant association was found between NSOC and rs3821949 or rs12532 in MSX1 gene, whereas an association was observed between the P147Q variant and cleft lip with cleft palate in the case-control analysis.	0.03718245	2011	MSX1	4	4858675	G	A
rs4742741	18978678	203286	ANKS6	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	ANKS6	9	98777319	G	A
rs4817579	18978678	2618	GART	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.002367032	2008	GART	21	33537914	T	C
rs560426	20436469	3664	IRF6	umls:C0008924	BeFree	SNPs near two genes not previously associated with cleft lip with and without cleft palate (MAFB, most significant SNP rs13041247, with odds ratio (OR) per minor allele = 0.704, 95% CI 0.635-0.778, P = 1.44 x 10(-11); and ABCA4, most significant SNP rs560426, with OR = 1.432, 95% CI 1.292-1.587, P = 5.01 x 10(-12)) and two previously identified regions (at chromosome 8q24 and IRF6) attained genome-wide significance.	0.172755664	2010	ABCA4	1	94087882	C	T
rs642961	19780991	3664	IRF6	umls:C0008924	BeFree	Lack of association between IRF6 polymorphisms (rs2235371 and rs642961) and non-syndromic cleft lip and/or palate in a Brazilian population.	0.172755664	2010	NA	1	209815925	A	G
rs642961	20799332	3664	IRF6	umls:C0008924	BeFree	Furthermore, to test whether rs642961 could modulate IRF6 expression in vivo, we surgically collected lip skin tissues within the adjacent region of lip cleft site and found rs642961 genotypes were associated with differential levels of IRF6 mRNA and protein expression in an allele-dosage manner, providing the first evidence that rs642961 affected IRF6 expression in vivo.	0.172755664	2010	NA	1	209815925	A	G
rs674433	18978678	3664	IRF6	umls:C0008924	GAD	[These findings support the hypothesis that some loci may contribute to both clefts and congenital dental anomalies.]	0.172755664	2008	IRF6	1	209791530	G	T
rs7078160	20023658	57698	KIAA1598	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	KIAA1598	10	117068049	G	A
rs7590268	20023658	63892	THADA	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	THADA	2	43312986	T	G
rs9574565	20023658	54602	NDFIP2	umls:C0008924	GAD	[Genome-wide association study identifies two susceptibility loci for nonsyndromic cleft lip with or without cleft palate.]	0.002367032	2010	NA	13	80094739	T	C

GWASdb Annotation(Total Genotypes:0)
(Waiting for update.)

GWASdb Snp Trait(Total Genotypes:1276)
CHR	POS	SNPID	REF	ALT	ORI_SNPID	PMID	P_VALUE	P_VALUE_TEXT	OR/BETA	CI95_TEXT	GWAS_INITIAL_SAMPLE_SIZE	SUB_POPULATION	SUPER_POPULATION	GWAS_TRAIT	HPO_ID	HPO_TERM	DO_ID	DO_TERM	MESH_ID	MESH_TERM	EFO_ID	EFO_TERM	DOLITE_TERM	RISK_ALLELE	PUBLICATION_TYPE	AA	GENE_SYMBOL	TYPE	REFGENE
1	5341464	rs17423547	T	C	rs17423547	22419666	4.98E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	9118596	rs12145292	C	A	rs12145292	22419666	7.96E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	18716278	rs7538442	A	G	rs7538442	20023658	7.04E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
1	18929842	rs4920520	G	A	rs4920520	20436469	8.22E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18929842	rs4920520	G	A	rs4920520	22863734	6.45E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18940380	rs4920522	C	T	rs4920522	20436469	4.61E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18940380	rs4920522	C	T	rs4920522	22863734	9.41E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	18952112	rs17352100	C	T	rs17352100	20436469	6.55E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18952112	rs17352100	C	T	rs17352100	22863734	3.25E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	18956458	rs766325	G	A	rs766325	20436469	2.21E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18956458	rs766325	G	A	rs766325	22863734	7.39E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	18965061	rs7364475	C	T	rs7364475	22863734	2.77E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	18966007	rs11583072	G	T	rs11583072	22863734	1.42E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18971634	rs56675509	G	C	rs56675509	22863734	1.03E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18972776	rs9439713	G	A	rs9439713	22863734	2.87E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18976489	rs9439714	T	C	rs9439714	22863734	7.02E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	18978372	rs4920524	T	G	rs4920524	22863734	4.94E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	18979320	rs6695765	T	C	rs6695765	20436469	2.43E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18979320	rs6695765	T	C	rs6695765	22863734	1.12E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	18979874	rs742071	G	T	rs742071	20436469	1.57E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18979874	rs742071	G	T	rs742071	22863734	7.00E-09	NA	1.32	[1.13-1.54]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs742071-T	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18983697	rs6659735	G	A,C,T	rs6659735	20436469	8.13E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18983697	rs6659735	G	A,C,T	rs6659735	22863734	1.36E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18986508	rs56075776	G	A	rs56075776	22863734	2.16E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	18989575	rs1339063	A	T	rs1339063	22863734	5.84E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	18990793	rs4920338	C	T	rs4920338	20436469	2.36E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	18990793	rs4920338	C	T	rs4920338	22863734	8.39E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	18991005	rs4920339	C	T	rs4920339	22863734	1.29E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	20018195	rs3748748	G	A	rs3748748	22863734	4.78E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	20562389	rs4655165	G	A	rs4655165	20436469	2.74E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	22579798	rs2744759	T	G	rs2744759	20436469	6.47E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	24645356	rs2248219	A	G	rs2248219	22419666	7.72E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	32276442	rs16834735	C	T	rs16834735	20023658	6.26E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	SPOCD1
1	40883266	rs427371	A	G	rs427371	22863734	1.87E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	42330585	rs12734651	C	A	rs12734651	22419666	9.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	47572046	rs4926805	C	T	rs4926805	22419666	4.01E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	48647124	rs11205449	T	G	rs11205449	22419666	3.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	48683611	rs960722	C	T	rs960722	22419666	1.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	70097708	rs2066296	T	G	rs2066296	22419666	9.92E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	70154441	rs1417437	T	C	rs1417437	22419666	4.00E-06	CLP	1.3	[1.47-1.16]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	70154441	rs1417437	T	C	rs1417437	22419666	9.00E-06	CL_CLP	1.25	[1.37-1.14]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	70160178	rs1417436	T	C	rs1417436	22419666	1.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	71398902	rs12097924	G	T	rs12097924	22419666	4.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	71403260	rs13374231	G	C	rs13374231	22419666	3.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	74501477	rs1384883	C	T	rs1384883	22419666	9.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	74560002	rs7535929	T	G	rs7535929	22419666	8.72E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	76746838	rs12079387	C	A,T	rs12079387	22419666	3.99E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	78990275	rs3766345	C	G	rs3766345	22419666	7.19E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	85216685	rs12744552	T	C	rs12744552	20023658	5.17E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
1	88786051	rs687790	C	T	rs687790	22419666	5.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	88790960	rs127384	T	C	rs127384	22419666	6.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	94525623	rs521538	A	G	rs521538	22863734	1.25E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	94531192	rs1191232	A	G	rs1191232	22863734	8.67E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94545160	rs2275035	C	T	rs2275035	20436469	3.74E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94548080	rs4147827	C	G	rs4147827	20436469	2.58E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94553438	rs560426	C	T	rs560426	20436469	5.70E-12	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94553438	rs560426	C	T	rs560426	22863734	3.00E-12	NA	1.42	[1.24-1.62]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs560426-G	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	94553438	rs560426	C	T	rs560426	22863734	5.00E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs560426-G	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	94553866	rs563429	A	G	rs563429	22863734	6.33E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94554453	rs4847196	G	A	rs4847196	20436469	2.27E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94558425	rs952499	T	C	rs952499	20436469	7.19E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94558425	rs952499	T	C	rs952499	22863734	7.18E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94568822	rs2297636	T	C	rs2297636	20436469	5.83E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94570016	rs481931	G	T	rs481931	20436469	8.57E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94570218	rs570926	T	C	rs570926	20436469	3.24E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94571420	rs1211213	A	G	rs1211213	20436469	5.50E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94574780	rs4147816	C	T	rs4147816	20436469	6.51E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94575043	rs4147812	A	C	rs4147812	20436469	9.12E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94575043	rs4147812	A	C	rs4147812	22863734	9.90E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	94575056	rs4147811	C	T	rs4147811	20436469	4.02E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94575171	rs3827712	T	C	rs3827712	20436469	8.57E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94575308	rs3789432	T	C	rs3789432	20436469	1.39E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94576968	rs2297634	T	C	rs2297634	22863734	4.39E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	94581125	rs10782976	G	A	rs10782976	20436469	4.77E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94582227	rs4147804	G	A	rs4147804	20436469	7.25E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94582293	rs4147803	G	C	rs4147803	20436469	4.67E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94586328	rs3789451	C	T	rs3789451	20436469	8.45E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94586328	rs3789451	C	T	rs3789451	22863734	3.56E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94587501	rs3789452	T	A	rs3789452	20436469	7.30E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94587687	rs2151846	T	G	rs2151846	20436469	1.61E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94594043	rs11802196	A	C	rs11802196	20436469	9.98E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94594043	rs11802196	A	C	rs11802196	22863734	1.55E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	94596831	rs6686599	G	A	rs6686599	20436469	3.73E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94596831	rs6686599	G	A	rs6686599	22863734	1.96E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	94596867	rs1931565	A	G	rs1931565	22863734	1.02E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94635028	rs1411701	G	A	rs1411701	22863734	5.88E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	94678512	rs6541340	T	C	rs6541340	22863734	1.45E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	94691240	rs3789688	T	C	rs3789688	22863734	2.46E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	94752469	rs11165110	G	A	rs11165110	22863734	1.02E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	94803032	rs2172133	A	G	rs2172133	22863734	1.61E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	94829769	rs12057415	T	C	rs12057415	20436469	3.52E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94829769	rs12057415	T	C	rs12057415	22863734	2.05E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	94850443	rs2391467	A	G	rs2391467	20436469	2.11E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	94850443	rs2391467	A	G	rs2391467	22863734	1.10E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	95517539	rs6674604	C	A	rs6674604	20436469	1.67E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	96148182	rs12142219	A	G	rs12142219	22419666	8.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	107686418	rs4481881	T	C	rs4481881	20023658	3.08E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NTNG1
1	107693167	rs4307594	T	C	rs4307594	20023658	2.00E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NTNG1
1	146693229	rs2354432	C	T	rs2354432	22419666	9.34E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	146767062	rs7516430	A	G	rs7516430	22419666	7.66E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	146813137	rs2353983	C	T	rs2353983	22419666	9.53E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	151820324	rs6587625	T	C	rs6587625	22419666	7.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	151830098	rs2879130	C	T	rs2879130	22419666	5.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	157538612	rs11264764	G	A	rs11264764	22419666	2.69E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	162842202	rs12047510	T	C	rs12047510	20436469	5.54E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	162842202	rs12047510	T	C	rs12047510	22863734	5.36E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	164609582	rs16833488	C	T	rs16833488	22419666	1.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	167451115	rs12737372	C	T	rs12737372	22419666	1.84E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	167451850	rs2949655	G	A	rs2949655	22419666	3.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	187552665	rs1339083	T	C	rs1339083	22419666	3.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	187573295	rs12075120	G	A	rs12075120	22419666	2.67E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	187581303	rs2383658	G	A	rs2383658	22419666	7.37E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	188876279	rs16829586	C	T	rs16829586	22419666	8.45E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	189523652	rs12132580	T	C	rs12132580	22419666	4.98E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	190256835	rs2419063	A	G	rs2419063	22419666	8.96E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	190301532	rs1540513	C	T	rs1540513	22419666	4.07E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	200068658	rs2253771	C	T	rs2253771	22419666	7.00E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	209885318	rs11119328	C	A	rs11119328	22863734	8.12E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	209912593	rs17015076	C	T	rs17015076	20436469	8.94E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209918151	rs3765240	G	A	rs3765240	22863734	8.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	209929299	rs627670	G	A	rs627670	22863734	1.04E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	209930694	rs909710	G	A	rs909710	22863734	8.79E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	209936914	rs17015169	C	T	rs17015169	20436469	1.66E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209936914	rs17015169	C	T	rs17015169	22863734	8.14E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	209946707	rs590223	G	A	rs590223	22863734	1.92E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	209959614	rs1044516	G	T	rs1044516	20436469	3.93E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209962794	rs2073485	G	A	rs2073485	20436469	6.11E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209962794	rs2073485	G	A	rs2073485	22863734	2.12E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	209968684	rs2013162	C	A	rs2013162	20436469	2.24E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209977111	rs861020	A	G	rs861020	20023658	8.20E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	IRF6
1	209977111	rs861020	A	G	rs861020	20436469	1.32E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209977111	rs861020	A	G	rs861020	22863734	3.00E-12	NA	1.44	[1.27-1.64]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs861020-A	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	209988047	rs10863790	A	C	rs10863790	20436469	1.00E-14	NA	1.72	[1.49-1.98]	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	209989270	rs642961	A	G	rs642961	19270707	2.00E-06	NA	NA	NA	224 European ancestry cases; 383 European ancestry controls	European(607)	ALL(607)	EUR(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs642961-A	Research Support, Non-U.S. Gov't	G	NA
1	210019824	rs126280	A	G	rs126280	20436469	1.09E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210019824	rs126280	A	G	rs126280	22863734	8.11E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	210027026	rs6689839	G	A	rs6689839	20436469	9.30E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210027026	rs6689839	G	A	rs6689839	22863734	1.98E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	210048819	rs2064163	G	T	rs2064163	20436469	2.44E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210048819	rs2064163	G	T	rs2064163	22863734	2.08E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	210049893	rs12063989	T	C	rs12063989	20436469	1.06E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210055630	rs932347	C	T	rs932347	20436469	3.07E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210055630	rs932347	C	T	rs932347	22863734	1.38E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
1	210068117	rs4844913	G	A	rs4844913	20436469	1.87E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210068117	rs4844913	G	A	rs4844913	22863734	7.99E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	210110537	rs9429830	T	C	rs9429830	20436469	1.74E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210110537	rs9429830	T	C	rs9429830	22863734	2.20E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	210174417	rs11119388	A	G	rs11119388	20436469	4.57E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210216946	rs227178	C	T	rs227178	20436469	2.96E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210216946	rs227178	C	T	rs227178	22863734	1.01E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	210348155	rs2485893	A	G	rs2485893	20436469	9.85E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210348155	rs2485893	A	G	rs2485893	22863734	8.86E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	210352196	rs10779526	T	C	rs10779526	20436469	8.70E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210352196	rs10779526	T	C	rs10779526	22863734	8.18E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
1	210369136	rs12094311	A	G	rs12094311	20436469	1.24E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210369136	rs12094311	A	G	rs12094311	22863734	8.89E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
1	210370590	rs12060567	G	A	rs12060567	20436469	3.17E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
1	210370590	rs12060567	G	A	rs12060567	22863734	1.62E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
1	213817311	rs12144639	G	A	rs12144639	22419666	5.70E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	219934317	rs946109	C	T	rs946109	22419666	5.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	226865254	rs708766	A	C	rs708766	22419666	8.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	230992134	rs1202570	A	G	rs1202570	22419666	9.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	232266181	rs17832313	T	C	rs17832313	22419666	8.05E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	237153919	rs1252145	A	G	rs1252145	22419666	2.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	237693190	rs2805446	T	C	rs2805446	22419666	2.50E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
1	240532005	rs10926234	T	C	rs10926234	22419666	8.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	2381613	rs11884676	G	A	rs11884676	22419666	8.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	8809061	rs4442969	C	T	rs4442969	22419666	4.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	8810425	rs10188643	C	T	rs10188643	22419666	2.06E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	11992128	rs10495585	A	C	rs10495585	20436469	9.42E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	11992128	rs373256169	AG	AAG,ACC	rs10495585	20436469	9.42E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	12089229	rs2716625	T	C	rs2716625	22419666	8.39E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	12095888	rs2033877	G	A	rs2033877	22419666	5.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	16557140	rs1156704	C	T	rs1156704	22419666	6.53E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	16705396	rs4832647	A	G	rs4832647	22863734	9.40E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
2	16706891	rs4497881	C	A	rs4497881	20436469	7.63E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	16706891	rs4497881	C	A	rs4497881	22863734	1.77E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	16715408	rs4441471	A	G	rs4441471	20436469	3.37E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	16715408	rs4441471	A	G	rs4441471	22863734	8.00E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	16731510	rs15653	G	A	rs15653	22863734	5.35E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
2	16731510	rs555725386	G	GT	rs15653	22863734	5.35E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
2	17556532	rs3112233	A	C	rs3112233	22419666	2.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	18381993	rs1013260	T	C	rs1013260	22419666	7.18E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	20322005	rs13384258	T	C	rs13384258	22419666	3.44E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	32918720	rs3769589	G	A	rs3769589	19270707	1.81E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	TTC27
2	32970453	rs1448225	T	C	rs1448225	19270707	3.13E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	TTC27
2	32981163	rs2839744	G	A	rs2839744	19270707	3.79E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	TTC27
2	32983526	rs2273665	C	T	rs2273665	19270707	3.79E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	TTC27
2	33034057	rs3769567	A	C	rs3769567	19270707	1.37E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	TTC27
2	33057389	rs10173352	G	A	rs10173352	19270707	2.17E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	LINC00486
2	33272454	rs7423562	A	C	rs7423562	22419666	9.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	33297929	rs11896749	C	T	rs11896749	22419666	7.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	33471192	rs3769528	A	G	rs3769528	22419666	3.49E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	33604048	rs6719824	A	C	rs6719824	22419666	3.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	40571426	rs10490051	T	C	rs10490051	22419666	1.35E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	40612072	rs1477004	A	G	rs1477004	22419666	9.34E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	40617820	rs2373859	C	T	rs2373859	22419666	8.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	42164215	rs4952548	A	C	rs4952548	22863734	1.21E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43484556	rs6749927	A	G	rs6749927	22863734	2.92E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43506259	rs7561670	G	A	rs7561670	22863734	1.60E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43514036	rs11900952	G	A	rs11900952	20436469	2.25E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	43514036	rs11900952	G	A	rs11900952	22863734	1.03E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
2	43540125	rs7590268	T	G	rs7590268	20023658	9.00E-08	NA	1.42	[1.26-1.59]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs7590268-G	Research Support, Non-U.S. Gov't	T	THADA
2	43540125	rs7590268	T	G	rs7590268	22863734	1.00E-08	NA	1.42	[1.23-1.64]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs7590268-G	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43544117	rs13035011	C	T	rs13035011	22863734	3.70E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43548946	rs35338810	C	T	rs35338810	22863734	6.44E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43576968	rs6729902	C	T	rs6729902	22863734	2.48E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43600058	rs6544648	C	T	rs6544648	22863734	1.91E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43620320	rs12477823	G	A	rs12477823	22863734	2.15E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
2	43621162	rs7596480	C	T	rs7596480	22863734	1.99E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43626212	rs6544652	C	T	rs6544652	22863734	2.12E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43628055	rs7600177	C	T	rs7600177	22863734	2.65E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43630493	rs17030752	T	C	rs17030752	22863734	7.02E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43634135	rs9677398	C	A	rs9677398	22863734	3.78E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43635143	rs6544656	G	A	rs6544656	22863734	2.27E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43670144	rs10445925	G	C	rs10445925	22863734	1.40E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43675292	rs35114568	C	A	rs35114568	22863734	1.73E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43686207	rs2046916	C	T	rs2046916	22863734	3.21E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43779665	rs1873555	T	C	rs1873555	22863734	2.52E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43783141	rs6725776	A	G	rs6725776	22863734	3.95E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43798053	rs10211106	C	T	rs10211106	22863734	7.83E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	43817505	rs11897432	G	A	rs11897432	22863734	2.36E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43873505	rs17335631	C	A	rs17335631	20023658	8.41E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	PLEKHH2
2	43873505	rs17335631	C	A	rs17335631	22863734	1.44E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	43926465	rs7592384	G	T	rs7592384	22863734	5.27E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43929983	rs4952676	G	A	rs4952676	22863734	4.19E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	43931176	rs4953002	T	C	rs4953002	22863734	5.75E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	55182968	rs11898145	C	A	rs11898145	22419666	5.23E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	71806112	rs7568834	T	C	rs7568834	20436469	8.95E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	97366303	rs2280355	A	G	rs2280355	19270707	1.02E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	FER1L5
2	101826261	rs1192817	G	T	rs1192817	22419666	4.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	103979257	rs10469858	A	G	rs10469858	22419666	2.85E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	124749962	rs1921817	T	C	rs1921817	22419666	1.07E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	129050909	rs1375347	A	G	rs1375347	20436469	8.11E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	133277683	rs4395295	C	T	rs4395295	22419666	4.05E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	133771658	rs1437903	C	A	rs1437903	22419666	6.60E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	134817016	rs1715008	C	T	rs1715008	20436469	6.41E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	163604529	rs10168953	A	C	rs10168953	22419666	8.51E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	171176392	rs2113650	T	C	rs2113650	22419666	9.80E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	180397455	rs1400822	C	A,G,T	rs1400822	20023658	4.80E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G,T	ZNF385B
2	187498562	rs7585471	A	G	rs7585471	22419666	5.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	187526672	rs1448427	G	A	rs1448427	22419666	3.80E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	193041060	rs2356960	G	A	rs2356960	22419666	6.54E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	205169149	rs1981913	T	C	rs1981913	22419666	9.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	206779987	rs1861719	C	T	rs1861719	22419666	6.56E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	207798923	rs6720430	T	G	rs6720430	22419666	2.92E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	211578483	rs1160096	C	T	rs1160096	22419666	8.73E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	220603899	rs6436163	C	T	rs6436163	22863734	1.51E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	220657836	rs1364701	C	T	rs1364701	22863734	8.33E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	220659638	rs982693	T	G	rs982693	22863734	6.54E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	220667933	rs719325	C	T	rs719325	22863734	5.00E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	220668738	rs3815854	C	T	rs3815854	20436469	2.87E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
2	220668738	rs3815854	C	T	rs3815854	22863734	7.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
2	220689584	rs992871	C	T	rs992871	22863734	1.29E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
2	221954950	rs16862154	G	A	rs16862154	22419666	1.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	222067150	rs12477147	T	G	rs12477147	22863734	7.33E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
2	230104110	rs1226994	C	T	rs1226994	22419666	4.91E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	230109673	rs1226998	T	C	rs1226998	22419666	3.69E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	230142079	rs12988652	G	A	rs12988652	22419666	1.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	231709953	rs10182071	A	G	rs10182071	19270707	5.14E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
2	234733064	rs7557532	T	G	rs7557532	22419666	5.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	235960824	rs4505466	C	T	rs4505466	22419666	3.13E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	235960893	rs10174126	T	C	rs10174126	22419666	7.00E-07	CP	1.59	[1.32-1.92]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
2	235965403	rs4334446	T	C	rs4334446	22419666	6.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	126158	rs6778252	C	A	rs6778252	22419666	5.73E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	1187861	rs13326242	C	T	rs13326242	22419666	2.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	6216211	rs4547687	C	T	rs4547687	20436469	9.86E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	7538202	rs1450100	T	G	rs1450100	22419666	8.00E-06	CL	1.54	[1.85-1.27]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	7553165	rs3804936	C	T	rs3804936	22419666	6.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	9989107	rs34233937	C	T	rs34233937	22419666	1.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	12763841	rs6442325	A	C	rs6442325	19270707	7.94E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
3	16114461	rs12497859	A	G	rs12497859	22419666	6.20E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	16127222	rs9830122	T	C	rs9830122	22419666	7.09E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	16133383	rs10865738	T	C	rs10865738	22419666	1.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	21807679	rs12633231	C	T	rs12633231	22419666	2.70E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	21936532	rs259498	G	A	rs259498	20023658	5.58E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	LOC100505836
3	31452963	rs9843322	G	T	rs9843322	22419666	5.74E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	31456161	rs9831111	C	T	rs9831111	22419666	6.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	38766675	rs6795970	A	G	rs6795970	22863734	9.80E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	38798836	rs6798015	C	T	rs6798015	22863734	4.21E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	39334720	rs9825782	C	T	rs9825782	22419666	2.50E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	43294971	rs6808396	T	C	rs6808396	22419666	1.62E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	43303296	rs1320163	A	G	rs1320163	22419666	8.94E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	53260325	rs7650103	A	G	rs7650103	22419666	2.48E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	53802748	rs3774581	A	G	rs3774581	22419666	1.31E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	57303684	rs11544593	A	G	rs11544593	20023658	8.28E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	APPL1
3	59814048	rs10428174	G	A	rs10428174	20436469	4.49E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	59946384	rs11707783	A	G	rs11707783	22419666	5.11E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	59961536	rs212034	G	A	rs212034	22419666	5.84E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	59981525	rs212016	T	C	rs212016	22419666	7.00E-06	CL	1.54	[1.89-1.27]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	63028072	rs1031246	G	A	rs1031246	22419666	2.25E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	63063240	rs1868065	C	T	rs1868065	22419666	3.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	63073352	rs2053759	C	T	rs2053759	22419666	4.39E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	69362959	rs6549198	A	G	rs6549198	22419666	5.82E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	72219675	rs6808099	C	T	rs6808099	22419666	6.83E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	74577921	rs6767471	C	T	rs6767471	19270707	3.21E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
3	74584605	rs9831609	A	C	rs9831609	19270707	4.50E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
3	74607020	rs4677414	A	G	rs4677414	19270707	1.43E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
3	86526422	rs1603320	T	G	rs1603320	22419666	5.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	89329632	rs1040017	T	G	rs1040017	22863734	8.63E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	89466339	rs35968370	A	T	rs35968370	22863734	8.43E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89489529	rs6771054	T	C	rs6771054	22863734	3.63E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	89493167	rs7637670	G	A	rs7637670	22863734	3.22E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89494030	rs987748	C	A	rs987748	22863734	2.12E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89497082	rs7633500	G	A	rs7633500	22863734	7.35E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89521693	rs35124509	T	C	rs35124509	22863734	9.68E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	89523038	rs12636275	C	A	rs12636275	22863734	7.62E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89525505	rs2117137	A	G	rs2117137	22863734	7.76E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	89530057	rs7650184	C	A	rs7650184	22863734	9.08E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89534377	rs7632427	T	C	rs7632427	20436469	5.36E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	89534377	rs7632427	T	C	rs7632427	22863734	4.00E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	89541934	rs11918555	C	T	rs11918555	22863734	2.06E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89564891	rs6774870	C	T	rs6774870	22863734	8.24E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89574852	rs907548	C	T	rs907548	22863734	9.84E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89581408	rs724972	A	T	rs724972	22863734	3.26E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89587262	rs7652296	A	G	rs7652296	22863734	2.39E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89595252	rs7621573	C	T	rs7621573	22863734	3.05E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89597679	rs10511145	C	A	rs10511145	20436469	7.30E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	89597679	rs10511145	C	A	rs10511145	22863734	3.59E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89604774	rs17027018	C	T	rs17027018	22863734	2.96E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89612941	rs541455490	C	CA	rs55747880	22863734	1.20E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	NA
3	89612941	rs55747880	C	A	rs55747880	22863734	1.20E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	NA
3	89633140	rs7635916	G	A	rs7635916	22863734	5.16E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89640350	rs6551413	C	G	rs6551413	22863734	5.82E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89642054	rs6795325	T	C	rs6795325	22863734	9.03E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89645542	rs1520596	T	C	rs1520596	22863734	1.45E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89694053	rs60243237	C	T	rs60243237	22863734	4.99E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89701482	rs59381722	T	G	rs59381722	22863734	9.36E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	89705161	rs6551415	G	T	rs6551415	22863734	2.39E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	89723684	rs11925143	G	A	rs11925143	22863734	4.47E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	89724217	rs7613412	A	T	rs7613412	22863734	4.47E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	99436424	rs668668	C	T	rs668668	20436469	9.52E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99436424	rs668668	C	T	rs668668	22863734	2.65E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	99459669	rs694429	C	T	rs694429	22863734	2.23E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	99462647	rs792829	G	A	rs792829	22863734	5.67E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	99471308	rs792841	G	T	rs792841	20436469	2.92E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99471308	rs792841	G	T	rs792841	22863734	3.69E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	99476295	rs792835	C	T	rs792835	20436469	1.59E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99476295	rs792835	C	T	rs792835	22863734	2.82E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T,C
3	99477142	rs704570	A	G	rs704570	20436469	2.97E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99477142	rs704570	A	G	rs704570	22863734	1.70E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	99483773	rs704574	A	G	rs704574	20436469	1.46E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99483773	rs704574	A	G	rs704574	22863734	2.56E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	99503728	rs1038294	A	G	rs1038294	20436469	1.35E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99503728	rs1038294	A	G	rs1038294	22863734	2.17E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	99508768	rs793494	T	C	rs793494	20436469	3.56E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99508768	rs793494	T	C	rs793494	22863734	2.33E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	99515750	rs1287283	A	G	rs1287283	22863734	7.56E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	99571926	rs704582	C	T	rs704582	20436469	3.58E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99592596	rs813218	C	T	rs813218	20436469	1.97E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99592596	rs813218	C	T	rs813218	22863734	1.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
3	99597928	rs1384062	A	C	rs1384062	20436469	1.80E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99597928	rs1384062	A	C	rs1384062	22863734	2.82E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	99643176	rs793440	C	T	rs793440	20436469	3.12E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99643176	rs793440	C	T	rs793440	22863734	3.91E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	99665521	rs13317017	A	C	rs13317017	20436469	1.36E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99665521	rs13317017	A	C	rs13317017	22863734	2.39E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
3	99679584	rs4244713	T	G	rs4244713	20436469	1.82E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99679584	rs4244713	T	G	rs4244713	22863734	3.00E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	99680086	rs4075038	A	G	rs4075038	20436469	3.10E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99751480	rs766778	C	T	rs766778	20436469	1.73E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	99751480	rs766778	C	T	rs766778	22863734	1.92E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C,T
3	99904783	rs12629505	G	A	rs12629505	22863734	9.23E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G,A
3	100698454	rs2595899	T	C	rs2595899	22419666	5.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	104595269	rs1436339	G	A	rs1436339	22419666	9.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	107667951	rs6774951	G	A	rs6774951	22419666	7.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	111467155	rs13074817	A	G	rs13074817	22419666	7.13E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	111468099	rs4284954	T	C	rs4284954	22419666	4.84E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	111469374	rs9834030	A	G	rs9834030	22419666	5.19E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	111807719	rs4682355	G	A	rs4682355	20436469	9.40E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	111824279	rs16859207	A	G	rs16859207	20436469	9.99E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	116735107	rs10511363	C	T	rs10511363	20023658	8.69E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
3	116735288	rs871216	C	T	rs871216	20023658	8.69E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
3	118659679	rs9878706	T	G	rs9878706	22419666	5.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	124120819	rs3772744	T	G	rs3772744	22419666	8.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	124289287	rs13077090	A	G	rs13077090	22419666	7.10E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	124318900	rs6797559	T	G	rs6797559	22419666	2.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	124322816	rs13066544	G	A	rs13066544	22419666	8.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	140902128	rs1010717	C	T	rs1010717	22419666	3.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	147960665	rs6769088	A	G	rs6769088	22419666	8.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	148369654	rs812196	C	T	rs812196	22419666	5.86E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	148370256	rs421791	A	G	rs421791	22419666	9.68E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	151530121	rs2120982	T	C	rs2120982	20023658	7.72E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
3	153779868	rs17817774	A	G	rs17817774	22419666	9.92E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	173323726	rs10513715	C	T	rs10513715	22419666	6.09E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	173958362	rs16858344	G	A	rs16858344	22419666	8.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	174717183	rs6445188	T	C	rs6445188	20436469	2.74E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	175669896	rs9823496	C	A	rs9823496	20436469	8.61E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	185949248	rs7648336	C	A	rs7648336	22419666	3.66E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
3	187158529	rs7637064	T	C	rs7637064	20436469	4.27E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	189528852	rs4687094	C	A	rs4687094	20023658	5.46E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	TP63
3	189549423	rs17447439	A	G	rs17447439	20436469	3.99E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
3	196814424	rs3843376	T	C	rs3843376	22863734	7.85E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	196833650	rs12632536	T	C	rs12632536	22863734	5.84E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	196865242	rs1134986	C	T	rs1134986	22863734	7.42E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
3	196961186	rs10489880	A	G	rs10489880	22863734	6.41E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
3	196963612	rs338186	G	A	rs338186	22863734	4.06E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
4	1158991	rs17802266	C	A	rs17802266	20436469	9.86E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	4653004	rs6830734	T	C	rs6830734	22863734	3.49E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
4	4682267	rs11730104	T	G	rs11730104	22419666	5.54E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	4818925	rs1907989	A	G	rs1907989	22863734	7.66E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
4	15939193	rs2245928	G	A	rs2245928	19270707	2.30E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	FGFBP1
4	15940205	rs2531174	G	A	rs2531174	19270707	2.30E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	FGFBP1
4	18072500	rs1563749	C	T	rs1563749	22419666	4.95E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	18079517	rs9291662	G	A	rs9291662	22419666	6.09E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	23473748	rs723394	G	A	rs723394	22419666	9.36E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	23473797	rs723393	G	A	rs723393	22419666	7.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	23474539	rs6829223	G	A	rs6829223	22419666	9.52E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	31044237	rs7678773	C	T	rs7678773	19270707	2.70E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	PCDH7
4	31044237	rs7678773	C	T	rs7678773	20023658	6.19E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	PCDH7
4	31055027	rs4615136	A	G	rs4615136	19270707	5.22E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	PCDH7
4	31066670	rs4352437	C	T	rs4352437	19270707	7.86E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	PCDH7
4	32374088	rs10517249	T	C	rs10517249	20436469	7.33E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	38456404	rs17581460	T	C	rs17581460	22419666	8.36E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	41607680	rs11942246	A	G	rs11942246	20023658	8.16E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	LIMCH1
4	41611575	rs1105886	A	G	rs1105886	20023658	7.84E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	LIMCH1
4	41611575	rs1105886	A	G	rs1105886	22863734	4.53E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
4	56545905	rs9997327	G	A	rs9997327	19270707	6.49E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
4	58203605	rs1404372	C	A,G,T	rs1404372	19270707	1.52E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
4	77531337	rs12640320	C	A	rs12640320	20436469	4.69E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	77771345	rs17002253	T	C	rs17002253	22419666	9.34E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	84070303	rs12640334	T	C	rs12640334	22419666	8.84E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	90880403	rs12233759	G	A	rs12233759	22419666	8.31E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	95290250	rs7694491	C	T	rs7694491	20436469	8.46E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	121387642	rs705112	T	C	rs705112	22419666	9.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	125095613	rs10021517	A	G	rs10021517	22419666	9.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	125109084	rs6834028	G	A	rs6834028	22419666	5.19E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	125120257	rs960925	A	G	rs960925	22419666	4.77E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	125157264	rs1123772	C	T	rs1123772	22419666	6.18E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	138068118	rs4864388	G	T	rs4864388	22419666	7.63E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	149590581	rs2358469	G	A	rs2358469	22419666	4.54E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	158327705	rs6823909	T	C	rs6823909	20436469	7.48E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	169032483	rs11944588	A	G	rs11944588	22419666	8.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	169801952	rs12643097	G	A	rs12643097	20436469	2.67E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	184583230	rs13130564	A	G	rs13130564	22419666	1.45E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	187561798	rs7663350	C	T	rs7663350	20436469	8.17E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
4	188927822	rs1388935	C	T	rs1388935	22419666	6.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
4	190407970	rs4862968	G	T	rs4862968	22419666	8.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	1404548	rs6869645	C	T	rs6869645	22419666	4.96E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	1550942	rs10079102	T	C	rs10079102	22419666	9.06E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	2338908	rs92833	C	T	rs92833	22419666	5.80E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	2346621	rs468976	A	G	rs468976	22419666	8.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	2878637	rs2934550	G	A	rs2934550	22419666	2.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	9923477	rs10036550	T	C	rs10036550	20023658	7.13E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
5	11397573	rs31837	C	A	rs31837	20023658	2.55E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	CTNND2
5	14384453	rs30791	A	C	rs30791	22419666	4.80E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	14397238	rs30774	T	C	rs30774	22419666	2.77E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	14400123	rs28343	G	A	rs28343	22419666	3.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	14400955	rs42206	T	C	rs42206	22419666	1.63E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	20633323	rs11958512	C	T	rs11958512	22419666	5.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	22161224	rs9293012	A	G	rs9293012	22419666	6.34E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	22737399	rs4701297	T	C	rs4701297	22419666	6.07E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	22740008	rs2129612	G	A	rs2129612	22419666	5.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	25794827	rs438142	C	T	rs438142	22419666	6.47E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	25840450	rs10065041	T	C	rs10065041	22419666	1.68E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	31833816	rs10042146	A	G	rs10042146	22419666	9.21E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	38038345	rs270552	G	A	rs270552	22863734	7.38E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
5	38040195	rs270550	T	C	rs270550	22863734	6.58E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C,T
5	57383115	rs4543222	G	A	rs4543222	22419666	4.31E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	65917185	rs10063997	T	C	rs10063997	19270707	4.50E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	MAST4
5	65917185	rs10063997	T	C	rs10063997	20023658	6.72E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	MAST4
5	68060559	rs28289	G	A	rs28289	22419666	2.68E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	72456421	rs17731153	C	T	rs17731153	22419666	1.52E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	76549558	rs1096752	T	C	rs1096752	22419666	5.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	80403392	rs540564	G	A	rs540564	22419666	9.76E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	80410276	rs4704699	C	T	rs4704699	22419666	6.65E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	80411221	rs4703822	G	A	rs4703822	22419666	4.00E-06	CP	1.59	[1.30-1.92]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	80654966	rs4703516	T	G	rs4703516	20023658	1.87E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	ACOT12
5	80654966	rs4703516	T	G	rs4703516	22863734	3.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
5	83139409	rs6882023	T	G	rs6882023	19270707	7.92E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
5	105131707	rs11744593	C	T	rs11744593	22419666	8.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	105663646	rs6863010	T	C	rs6863010	22419666	8.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	107110446	rs13358604	A	G	rs13358604	22419666	8.17E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	107485161	rs12515105	C	A	rs12515105	22419666	5.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	111703635	rs388383	C	T	rs388383	22863734	1.37E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
5	115330927	rs10044122	T	C	rs10044122	22419666	1.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	119879082	rs10063554	G	A	rs10063554	22419666	6.45E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	124073861	rs4629598	G	A	rs4629598	22419666	2.30E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	133115939	rs10061439	G	A	rs10061439	22419666	1.48E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	134469185	rs596342	T	C	rs596342	22419666	5.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	135246790	rs12522916	G	A	rs12522916	22419666	6.66E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	136643868	rs9327783	G	A	rs9327783	22863734	6.62E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
5	147298497	rs2400440	C	T	rs2400440	22419666	6.45E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	154119471	rs13178728	C	T	rs13178728	22419666	5.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	156503767	rs12152865	T	C	rs12152865	22419666	4.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	168621773	rs297838	G	A	rs297838	20436469	7.45E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
5	168626241	rs744579	T	C	rs744579	20436469	5.66E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
5	169479360	rs6860533	T	C	rs6860533	20023658	3.65E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	DOCK2
5	169994556	rs4867612	C	T	rs4867612	22419666	6.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
5	174156168	rs4242182	T	C	rs4242182	22863734	4.11E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
5	180077487	rs307805	T	C	rs307805	20436469	5.76E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
6	1093354	rs6912722	A	G	rs6912722	22419666	9.11E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	4721046	rs7767658	C	T	rs7767658	19270707	5.56E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T,C	CDYL
6	4915028	rs9405785	G	A	rs9405785	22863734	8.30E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	7474343	rs17763231	C	T	rs17763231	22863734	8.55E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
6	7736743	rs2068361	C	T	rs2068361	22419666	5.00E-06	CL	1.64	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	10392500	rs616879	T	G	rs616879	22863734	4.30E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	11770705	rs760788	C	T	rs760788	20436469	5.50E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
6	14977206	rs6902553	T	G	rs6902553	22419666	8.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	16032433	rs1935784	G	A	rs1935784	22419666	4.56E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	22265981	rs2455931	G	A	rs2455931	22419666	6.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	25994098	rs2013063	C	T	rs2013063	20023658	4.48E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
6	26023206	rs9379818	G	T	rs9379818	20023658	9.24E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
6	26069669	rs9295684	T	C	rs9295684	20023658	6.96E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
6	26088890	rs2794719	T	G	rs2794719	20023658	6.39E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	HFE
6	29645038	rs2535238	C	A	rs2535238	22863734	7.07E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
6	29656417	rs2747457	T	G	rs2747457	22863734	5.68E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	29928137	rs441808	T	C	rs441808	22419666	8.19E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	29943656	rs2394250	G	T	rs2394250	22419666	3.11E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	30328753	rs3094621	T	C	rs3094621	22863734	1.93E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	30940032	rs2844690	C	T	rs2844690	22419666	5.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	31089631	rs111199278	C	T	rs3095314	22863734	2.03E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	31089631	rs3095314	C	T	rs3095314	22863734	2.03E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
6	31133943	rs3130932	C	A	rs3130932	20023658	2.19E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	POU5F1
6	31136453	rs3130501	A	G	rs3130501	20023658	2.29E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	POU5F1
6	32804284	rs3819716	G	A	rs3819716	22419666	3.58E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	33256471	rs3130257	T	C	rs3130257	22419666	4.97E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	33382288	rs3116713	G	A	rs3116713	22419666	5.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	39030401	rs2268650	G	A	rs2268650	22419666	5.92E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	39349365	rs716952	G	A	rs716952	20023658	3.68E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	KIF6
6	39790043	rs11756622	C	T	rs11756622	22419666	2.96E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	43719391	rs9394963	G	T	rs9394963	22419666	8.49E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	45777475	rs4714874	A	G	rs4714874	22419666	8.83E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	78723311	rs9343714	A	C	rs9343714	22419666	3.10E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	79497569	rs570982868	A	AG	rs9343824	20023658	1.85E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
6	79497569	rs9343824	A	G	rs9343824	20023658	1.85E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
6	85707337	rs9444276	G	A	rs9444276	22419666	6.76E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	95103580	rs9445243	G	A	rs9445243	22419666	1.10E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	98819800	rs980899	C	T	rs980899	20436469	2.88E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
6	98824077	rs1507774	G	A	rs1507774	20436469	4.06E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
6	99727653	rs12660321	C	T	rs12660321	22419666	9.32E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	99753499	rs221530	G	A	rs221530	22419666	5.73E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	99960761	rs994198	C	T	rs994198	22419666	7.00E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	99972609	rs6912892	C	T	rs6912892	22419666	5.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	101307131	rs3734351	C	T	rs3734351	20023658	8.56E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	ASCC3
6	101468591	rs1321204	A	G	rs1321204	20023658	7.01E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
6	110818847	rs11153238	G	A	rs11153238	22419666	4.66E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	116169307	rs195482	T	G	rs195482	22419666	6.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	122913123	rs1430816	G	A	rs1430816	22419666	9.60E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	130941233	rs4895890	C	T	rs4895890	22863734	5.83E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
6	138326693	rs9402935	G	T	rs9402935	20023658	6.35E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
6	144041704	rs6915752	G	T	rs6915752	22419666	8.56E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	152974550	rs2258974	A	G	rs2258974	22863734	3.34E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G,A
6	156488698	rs9689110	A	G	rs9689110	22419666	4.95E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	163633015	rs6907701	G	A	rs6907701	20023658	7.73E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	PACRG
6	165631791	rs2197100	G	A	rs2197100	20023658	6.17E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
6	165638896	rs7740603	G	A	rs7740603	20023658	5.74E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G,A	NA
6	166011637	rs720701	A	G	rs720701	22419666	4.13E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	168463153	rs3734901	G	A	rs3734901	22419666	8.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
6	169270879	rs13191839	C	T	rs13191839	22419666	4.62E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	7854008	rs4725033	C	T	rs4725033	20436469	4.69E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
7	7854008	rs4725033	C	T	rs4725033	22863734	1.40E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
7	13567908	rs2692472	G	T	rs2692472	22419666	1.35E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	15630754	rs11763320	A	G	rs11763320	22419666	3.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	20740648	rs17218211	A	G	rs17218211	22863734	8.88E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
7	21807211	rs6978810	C	A	rs6978810	22419666	6.35E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	24980171	rs11771668	G	A	rs11771668	22419666	8.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	32064492	rs30561	C	T	rs30561	22419666	5.17E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	34285221	rs318576	A	G	rs318576	19270707	4.33E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
7	52954110	rs4476958	G	A	rs4476958	20023658	8.48E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
7	70575268	rs757839	C	A	rs757839	20023658	7.56E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
7	88125207	rs181046	C	T	rs181046	22419666	4.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	88148465	rs181027	G	A	rs181027	22419666	5.09E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	93578679	rs12704705	A	G	rs12704705	22419666	3.30E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	95056939	rs10259688	T	C	rs10259688	20436469	6.04E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
7	111766512	rs2434357	A	G	rs2434357	20436469	7.93E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
7	115747757	rs12374699	C	T	rs12374699	22419666	5.25E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	116218675	rs2402091	A	G	rs2402091	22419666	2.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	117716385	rs38828	T	C	rs38828	22419666	7.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	121707222	rs758692	G	T	rs758692	22419666	6.32E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	121714653	rs12217	C	T	rs12217	22419666	6.15E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
7	127839654	rs12538332	A	C	rs12538332	22419666	6.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	3787730	rs1834570	A	G	rs1834570	22419666	1.48E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	4816363	rs6982358	C	T	rs6982358	22419666	5.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	4816492	rs11996295	A	C	rs11996295	22419666	1.21E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	4936746	rs2407743	C	T	rs2407743	22419666	8.87E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	5995912	rs6983976	G	A	rs6983976	22419666	9.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	6021203	rs2570683	C	A	rs2570683	22419666	2.07E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	8429687	rs4840991	A	G	rs4840991	22419666	1.23E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	8433584	rs11784527	A	C	rs11784527	22419666	6.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	9167865	rs13439173	C	T	rs13439173	22419666	3.32E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	13176407	rs1671400	A	G	rs1671400	19270707	3.92E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	DLC1
8	17501907	rs4921798	T	C	rs4921798	22419666	4.42E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	21214731	rs2926426	T	G	rs2926426	22419666	3.03E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	23139436	rs10091786	C	T	rs10091786	19270707	2.15E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	27448729	rs7012010	T	C	rs7012010	20023658	5.03E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	31706695	rs776404	T	G	rs776404	22419666	4.51E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	32351333	rs17645417	T	C	rs17645417	20436469	5.49E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	63845950	rs7845898	C	T	rs7845898	20436469	1.09E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	63848298	rs4237066	G	A	rs4237066	20023658	6.36E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NKAIN3
8	63848556	rs1350059	A	G	rs1350059	20023658	2.92E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NKAIN3
8	63867493	rs7835051	T	G	rs7835051	20023658	5.97E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NKAIN3
8	63870658	rs9298070	G	T	rs9298070	20023658	4.72E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NKAIN3
8	71070788	rs2977983	T	C	rs2977983	22419666	3.48E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	71405288	rs10106461	C	T	rs10106461	20023658	9.67E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	71433755	rs4077921	T	C	rs4077921	20023658	4.08E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	72761190	rs2035376	C	T	rs2035376	19270707	9.18E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	LOC100132891
8	72817776	rs10504517	C	T	rs10504517	19270707	5.62E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	LOC100132891
8	77507613	rs7846606	A	G	rs7846606	22863734	7.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	80098526	rs1460172	A	G	rs1460172	22419666	8.54E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	81285759	rs6473226	T	C	rs6473226	22419666	5.60E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	82916953	rs7830040	C	T	rs7830040	22863734	3.47E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	82921979	rs4529421	A	G	rs4529421	22863734	1.25E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	82928598	rs7820074	T	C	rs7820074	22863734	9.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	87588198	rs3735972	T	C	rs3735972	22419666	6.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	88790626	rs7013934	C	T	rs7013934	20436469	3.12E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	88831715	rs7819401	A	G	rs7819401	20436469	7.28E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	88831715	rs7819401	A	G	rs7819401	22863734	7.45E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	88868340	rs12543318	C	A	rs12543318	20436469	5.17E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	88868340	rs12543318	C	A	rs12543318	22863734	2.00E-08	NA	1.27	[1.11-1.46]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs12543318-C	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	88896480	rs1911665	G	A	rs1911665	22863734	3.39E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	88904358	rs11786656	C	T	rs11786656	22863734	1.13E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	88918331	rs1034832	T	G	rs1034832	22863734	4.89E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	88925728	rs7839686	C	T	rs7839686	22863734	5.52E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	88949742	rs6469114	T	C	rs6469114	22863734	1.00E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	88962066	rs2337160	C	T	rs2337160	22863734	1.39E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	88970682	rs4400429	A	G	rs4400429	22863734	3.75E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	88981540	rs1477915	A	G	rs1477915	22863734	7.15E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	88983236	rs6995841	T	C	rs6995841	22863734	6.46E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	89224646	rs17666351	A	G	rs17666351	22419666	9.45E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	98388568	rs2853286	G	T	rs2853286	19270707	3.69E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	98388568	rs2853286	G	T	rs2853286	20023658	6.86E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	101429696	rs17425970	C	T	rs17425970	22419666	7.10E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	109599969	rs10089785	T	C	rs10089785	22419666	6.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	109660089	rs2935762	A	G	rs2935762	22419666	9.89E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	115911849	rs10046735	C	A	rs10046735	22419666	5.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	117253721	rs799887	T	C	rs799887	22419666	2.64E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
8	129640852	rs10505528	G	A	rs10505528	22863734	4.14E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129642367	rs1372995	T	C	rs1372995	19270707	1.58E-08	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129659764	rs10956433	C	T	rs10956433	22863734	2.01E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	129691246	rs4236736	C	A	rs4236736	22863734	2.55E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129695009	rs11783015	T	C	rs11783015	19270707	4.20E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129697564	rs1367966	C	T	rs1367966	19270707	8.06E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129709285	rs7015145	A	G	rs7015145	19270707	4.86E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129709285	rs7015145	A	G	rs7015145	20436469	2.96E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129709285	rs7015145	A	G	rs7015145	22863734	3.38E-12	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129716308	rs6470648	G	A	rs6470648	22863734	8.98E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129736086	rs1432017	C	T	rs1432017	19270707	1.76E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129736712	rs9297775	C	A	rs9297775	19270707	1.44E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129736712	rs9297775	C	A	rs9297775	20436469	1.98E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129736712	rs9297775	C	A	rs9297775	22863734	5.92E-12	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129739752	rs1030608	G	A	rs1030608	19270707	1.69E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129739752	rs1030608	G	A	rs1030608	22863734	3.43E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129739877	rs1030609	C	A	rs1030609	19270707	1.70E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129739877	rs1030609	C	A	rs1030609	22863734	4.49E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129747986	rs6996786	G	T	rs6996786	19270707	1.44E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129747986	rs6996786	G	T	rs6996786	20436469	5.70E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129747986	rs6996786	G	T	rs6996786	22863734	4.61E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129770388	rs6991851	A	C	rs6991851	19270707	1.87E-10	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129789134	rs4545057	A	C	rs4545057	19270707	7.80E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129789134	rs4545057	A	C	rs4545057	22863734	2.30E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129791539	rs4397367	A	G	rs4397367	22863734	1.12E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129791927	rs7460492	G	A	rs7460492	19270707	7.54E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129798114	rs4733649	C	A	rs4733649	19270707	7.78E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129800770	rs7006281	A	G	rs7006281	19270707	8.70E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129805974	rs1356761	G	A	rs1356761	19270707	4.16E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129824861	rs3857888	G	C	rs3857888	19270707	7.77E-15	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129837224	rs6983287	T	A	rs6983287	20436469	7.77E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129840739	rs2395855	T	C	rs2395855	19270707	5.37E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129840739	rs2395855	T	C	rs2395855	20436469	8.84E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129840739	rs2395855	T	C	rs2395855	22863734	7.18E-14	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129844671	rs4733653	C	T	rs4733653	19270707	6.12E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129844671	rs4733653	C	T	rs4733653	22863734	9.84E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129863533	rs873761	T	A	rs873761	19270707	4.69E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129872982	rs11989880	C	T	rs11989880	19270707	1.99E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129872982	rs11989880	C	T	rs11989880	20436469	1.19E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129872982	rs11989880	C	T	rs11989880	22863734	5.89E-15	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129881299	rs4733532	G	A	rs4733532	19270707	5.50E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129881299	rs4733532	G	A	rs4733532	20436469	2.18E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129881299	rs4733532	G	A	rs4733532	22863734	2.43E-14	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129888481	rs11994831	C	T	rs11994831	19270707	2.88E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129890188	rs17241253	T	C	rs17241253	19270707	1.11E-23	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129890405	rs1850889	A	G	rs1850889	19270707	4.02E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129890405	rs1850889	A	G	rs1850889	20436469	1.12E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129890405	rs1850889	A	G	rs1850889	22863734	1.44E-16	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129895021	rs1155582	C	G	rs1155582	19270707	1.91E-10	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129895473	rs7815713	T	C	rs7815713	19270707	2.02E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129896821	rs1519850	C	T	rs1519850	19270707	5.34E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A,G	NA
8	129896821	rs1519850	C	T	rs1519850	20436469	2.09E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129896821	rs1519850	C	T	rs1519850	22863734	3.77E-15	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A,G
8	129896967	rs1519849	T	C	rs1519849	19270707	5.38E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129896967	rs1519849	T	C	rs1519849	20436469	1.20E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129896967	rs1519849	T	C	rs1519849	22863734	1.49E-14	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129901910	rs1157136	T	C	rs1157136	19270707	4.18E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129901910	rs1157136	T	C	rs1157136	20436469	5.11E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129913448	rs6470670	T	C	rs6470670	19270707	1.22E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129914248	rs7009139	G	A	rs7009139	19270707	1.22E-11	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A,G	NA
8	129915760	rs1519847	C	T	rs1519847	19270707	2.42E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129915760	rs1519847	C	T	rs1519847	20436469	4.61E-13	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129915760	rs1519847	C	T	rs1519847	22863734	5.47E-21	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129919458	rs1530300	T	C	rs1530300	19270707	4.95E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129919458	rs1530300	T	C	rs1530300	20436469	2.00E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129919458	rs1530300	T	C	rs1530300	22863734	6.31E-22	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	129919800	rs1519841	T	C	rs1519841	19270707	1.72E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129919800	rs1519841	T	C	rs1519841	20436469	7.41E-12	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129919800	rs1519841	T	C	rs1519841	22863734	1.80E-20	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129920280	rs997310	C	A	rs997310	19270707	1.19E-08	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129926661	rs12542837	T	C	rs12542837	19270707	2.06E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129926661	rs12542837	T	C	rs12542837	20436469	2.29E-12	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129926661	rs12542837	T	C	rs12542837	22863734	1.02E-20	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129929148	rs11506137	C	T	rs11506137	19270707	1.51E-12	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129939466	rs17241866	T	C	rs17241866	19270707	9.08E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129946154	rs987525	C	A	rs987525	19270707	3.00E-24	NA	2.57	[2.02-3.26]	224 European ancestry cases; 383 European ancestry controls	European(607)	ALL(607)	EUR(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs987525-A	Research Support, Non-U.S. Gov't	A	NA
8	129946154	rs987525	C	A	rs987525	19656524	9.00E-08	NA	2.09	[1.59-2.76]	111 European ancestry cases; 5,951 European ancestry controls	European(6062)	ALL(6062)	EUR(6062)	ALL(6062)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129946154	rs987525	C	A	rs987525	20436469	4.00E-16	NA	1.78	[1.55-2.05]	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	rs987525-A	Research Support, N.I.H., Extramural
8	129946154	rs987525	C	A	rs987525	22863734	1.00E-26	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs987525-A	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129946154	rs987525	C	A	rs987525	22863734	2.00E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs987525-A	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129946154	rs987525	C	A	rs987525	22863734	5.00E-35	NA	1.92	[1.66-2.22]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs987525-A	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129947786	rs17820135	T	G	rs17820135	19270707	6.03E-14	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T,G	NA
8	129947882	rs12548036	G	T	rs12548036	19270707	2.08E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129947882	rs12548036	G	T	rs12548036	20436469	8.20E-12	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129947882	rs12548036	G	T	rs12548036	22863734	2.24E-21	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129948854	rs12548721	C	A	rs12548721	19270707	2.33E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129949791	rs10956453	G	C	rs10956453	19270707	4.02E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129950333	rs12549494	C	T	rs12549494	19270707	1.78E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129950390	rs1372449	G	A	rs1372449	19270707	1.13E-16	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129950844	rs7017252	C	T	rs7017252	19270707	3.22E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129950844	rs7017252	C	T	rs7017252	20436469	2.31E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129950844	rs7017252	C	T	rs7017252	22863734	1.81E-20	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	129952509	rs12547241	G	A	rs12547241	19270707	9.94E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129952509	rs12547241	G	A	rs12547241	20436469	5.52E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129952509	rs12547241	G	A	rs12547241	22863734	9.41E-17	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129953936	rs6995235	A	G	rs6995235	19270707	9.37E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129954008	rs11784358	C	T	rs11784358	19270707	8.29E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129959316	rs13265167	C	T	rs13265167	19270707	6.24E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129969187	rs1441994	T	C	rs1441994	19270707	3.65E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129970246	rs12546244	G	A	rs12546244	19270707	4.72E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129977464	rs1470206	T	C	rs1470206	19270707	6.67E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	129977464	rs1470206	T	C	rs1470206	20436469	3.74E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129977464	rs1470206	T	C	rs1470206	22863734	2.71E-17	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	129981468	rs13274247	G	A	rs13274247	19270707	8.87E-15	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129982756	rs882083	C	T	rs882083	19270707	1.60E-08	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	129982756	rs882083	C	T	rs882083	20436469	2.21E-12	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129982756	rs882083	C	T	rs882083	22863734	6.83E-23	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	129985440	rs11787407	A	G	rs11787407	19270707	4.10E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	129985440	rs11787407	A	G	rs11787407	20436469	2.99E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129985440	rs11787407	A	G	rs11787407	22863734	1.39E-18	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	129986110	rs12546523	G	A	rs12546523	19270707	8.73E-07	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	129986110	rs12546523	G	A	rs12546523	20436469	5.24E-10	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	129986110	rs12546523	G	A	rs12546523	22863734	1.19E-18	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	129993106	rs7838330	T	C	rs7838330	19270707	2.21E-08	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	130002730	rs2004375	C	T	rs2004375	19270707	4.91E-11	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130002730	rs2004375	C	T	rs2004375	22863734	2.95E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130003116	rs748978	G	A	rs748978	20436469	4.79E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	130003116	rs748978	G	A	rs748978	22863734	1.27E-14	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	130004704	rs766812	A	G	rs766812	19270707	8.98E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	130009233	rs17821251	T	C	rs17821251	19270707	1.15E-13	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	130009787	rs10110974	C	A	rs10110974	22863734	1.26E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130015715	rs2197111	A	G	rs2197111	19270707	4.09E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130015715	rs2197111	A	G	rs2197111	22863734	1.26E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130016499	rs7018275	C	T	rs7018275	19270707	4.09E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	130016499	rs7018275	C	T	rs7018275	22863734	1.30E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	130017714	rs7835741	T	C	rs7835741	19270707	7.03E-10	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130021961	rs10505532	A	C	rs10505532	22863734	3.43E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	130029034	rs1372452	A	G	rs1372452	19270707	9.08E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	130029034	rs1372452	A	G	rs1372452	22863734	5.63E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	130031006	rs12334809	T	C	rs12334809	19270707	9.08E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	NA	NA
8	130031006	rs12334809	T	C	rs12334809	22863734	5.86E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	NA
8	130042141	rs7844734	T	C	rs7844734	22863734	1.39E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130055981	rs4487715	T	C	rs4487715	22863734	5.26E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	130063971	rs10808576	T	G	rs10808576	20436469	6.27E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
8	130063971	rs10808576	T	G	rs10808576	22863734	2.88E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	130087172	rs11996876	T	C	rs11996876	19270707	1.46E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	130087172	rs11996876	T	C	rs11996876	22863734	3.56E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	130095478	rs11784932	C	A	rs11784932	22863734	1.07E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	130112168	rs4339605	T	C	rs4339605	22863734	2.06E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130157804	rs4418312	C	G	rs4418312	19270707	1.05E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130173467	rs4571700	C	T	rs4571700	22863734	1.10E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130203139	rs3935421	A	G	rs3935421	19270707	4.58E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130203139	rs3935421	A	G	rs3935421	22863734	4.55E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
8	130211328	rs4422741	T	C	rs4422741	19270707	5.60E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
8	130211328	rs4422741	T	C	rs4422741	22863734	6.09E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
8	130222035	rs4472475	A	G	rs4472475	19270707	2.96E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	130224721	rs7822386	A	G	rs7822386	19270707	8.69E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
8	130224721	rs7822386	A	G	rs7822386	22863734	3.33E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
8	130224742	rs7826130	C	T	rs7826130	19270707	5.12E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130224892	rs7826294	C	T	rs7826294	19270707	2.76E-09	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
8	130225011	rs7826688	G	A	rs7826688	19270707	6.02E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
8	130225011	rs7826688	G	A	rs7826688	22863734	3.22E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
8	132718006	rs529894	A	G	rs529894	22419666	1.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	442030	rs1887958	C	T	rs1887958	20023658	3.22E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	DOCK8
9	2064507	rs7035608	C	T	rs7035608	22419666	7.06E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	2065892	rs10811366	G	T	rs10811366	22419666	5.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	2074070	rs2066110	G	A	rs2066110	22419666	7.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	2090718	rs12375895	T	G	rs12375895	22419666	3.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	9186346	rs945464	C	T	rs945464	22419666	1.71E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	10913970	rs10959364	C	T	rs10959364	22419666	6.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	14378712	rs2382469	A	C	rs2382469	20436469	5.07E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
9	21471726	rs2383192	C	T	rs2383192	22419666	4.82E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	21478318	rs4246868	C	T	rs4246868	22419666	5.06E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	21555445	rs10757225	G	T	rs10757225	22419666	7.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	26276773	rs2082714	T	G	rs2082714	22419666	7.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	28544375	rs10968649	T	G	rs10968649	22419666	8.38E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	33427322	rs4879704	A	C	rs4879704	22419666	3.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	36845973	rs3780136	C	A	rs3780136	20023658	6.33E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	PAX5
9	36845973	rs3780136	C	A	rs3780136	22863734	3.65E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	72218613	rs10780539	A	G	rs10780539	19270707	6.13E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	APBA1
9	72229395	rs2161056	A	G	rs2161056	19270707	5.91E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	APBA1
9	75709442	rs17058421	A	G	rs17058421	22419666	2.17E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	75757209	rs10869227	C	T	rs10869227	22419666	4.15E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	86108027	rs3860938	G	T	rs3860938	20023658	9.92E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	FRMD3
9	86289460	rs7045761	T	C	rs7045761	22419666	6.73E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	86324426	rs12345514	G	T	rs12345514	22419666	5.77E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	87405212	rs1662695	G	A	rs1662695	22419666	5.91E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	92030186	rs9410321	T	C	rs9410321	22863734	6.09E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
9	92036427	rs4132699	A	C	rs4132699	20436469	4.72E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
9	92036427	rs4132699	A	C	rs4132699	22863734	5.00E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
9	92039416	rs11265876	T	G	rs11265876	22863734	1.91E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
9	92040475	rs10512197	C	T	rs10512197	22863734	4.49E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
9	92070391	rs11999884	A	G	rs11999884	22863734	5.67E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
9	92204172	rs2031970	C	T	rs2031970	22863734	1.95E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	92209587	rs7871395	C	T	rs7871395	22863734	1.75E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	92212750	rs1475537	C	T	rs1475537	22863734	2.01E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	92222453	rs3138512	G	A	rs3138512	22863734	2.22E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
9	92222495	rs3138513	C	T	rs3138513	20023658	8.64E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
9	92222495	rs3138513	C	T	rs3138513	22863734	3.45E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	92241847	rs17539995	G	A	rs17539995	22863734	7.30E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
9	92277210	rs1109998	A	G	rs1109998	22863734	3.22E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
9	92279448	rs4877120	T	G	rs4877120	22863734	1.06E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
9	93731058	rs12352804	G	A	rs12352804	22863734	7.96E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
9	99964351	rs7020393	A	G	rs7020393	22419666	1.86E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	101320582	rs10986740	G	A	rs10986740	22419666	1.66E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	105756213	rs1417704	T	C	rs1417704	22419666	3.38E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	116805634	rs12555049	A	G	rs12555049	22419666	5.53E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	120109509	rs4240415	T	C	rs4240415	22419666	5.89E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	122852849	rs12235613	T	C	rs12235613	22419666	9.51E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	122858134	rs945244	C	T	rs945244	22419666	8.85E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	129265742	rs3814127	A	G	rs3814127	22863734	4.61E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	129268065	rs10819174	C	T	rs10819174	22863734	7.08E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
9	132131098	rs10988346	G	A	rs10988346	22419666	3.36E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	139323201	rs1128877	A	G	rs1128877	22419666	5.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
9	139335206	rs1127162	T	C	rs1127162	22419666	2.17E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	5633549	rs7075917	C	T	rs7075917	22419666	3.44E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	6176780	rs3920615	T	C	rs3920615	22419666	2.59E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	6177682	rs4747887	T	C	rs4747887	22419666	3.92E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	6177794	rs4750012	C	T	rs4750012	22419666	3.37E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	6178236	rs7099083	G	A	rs7099083	22419666	4.37E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	6955430	rs2387751	C	A	rs2387751	22419666	5.39E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	7089016	rs10905099	A	G	rs10905099	22419666	8.00E-06	CP	3.45	[1.92-6.25]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	7108989	rs7074704	A	G	rs7074704	22419666	7.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	10423558	rs11256583	G	A	rs11256583	19270707	8.95E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
10	10650798	rs10905765	C	T	rs10905765	22419666	2.64E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	15020847	rs4276994	T	G	rs4276994	22419666	9.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	16243408	rs1340143	A	C	rs1340143	22419666	7.13E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	19340959	rs1934050	G	C	rs1934050	22419666	4.19E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	20448286	rs12356363	C	T	rs12356363	22863734	8.59E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
10	20993102	rs7095613	T	C	rs7095613	22419666	5.32E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	30177888	rs3006564	T	C	rs3006564	22419666	5.00E-06	CLP	1.32	[1.47-1.16]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	30188995	rs2989426	C	T	rs2989426	22419666	3.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	30194164	rs2989430	G	A	rs2989430	22419666	3.53E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	30194393	rs1610357	T	G	rs1610357	22419666	2.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	30201353	rs1573027	A	G	rs1573027	22419666	2.49E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	34563925	rs658885	A	G	rs658885	22419666	8.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	35639721	rs2474518	A	G	rs2474518	22419666	5.13E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	52581892	rs12413118	A	G	rs12413118	22419666	1.98E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	53365208	rs7077665	G	A	rs7077665	22419666	1.03E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	56716972	rs2045145	G	A	rs2045145	19270707	4.17E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
10	64605734	rs1475084	G	A	rs1475084	20436469	1.09E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	64610932	rs10822065	T	G	rs10822065	20436469	3.58E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	64611889	rs10509173	A	G	rs10509173	20436469	1.21E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	72750636	rs16928239	G	A	rs16928239	22863734	1.08E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	72774908	rs17542297	G	A	rs17542297	22863734	7.84E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	79176278	rs10740466	T	C	rs10740466	20023658	6.15E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	KCNMA1
10	79204191	rs7895934	G	A	rs7895934	22419666	9.81E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	89417472	rs2755427	A	G	rs2755427	22863734	3.54E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
10	112547206	rs10787281	G	A	rs10787281	22419666	2.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	115070140	rs499832	T	G	rs499832	19270707	8.61E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
10	115314498	rs10509980	A	C	rs10509980	22419666	6.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	118641396	rs11197843	G	T	rs11197843	22863734	2.97E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	118643670	rs2257791	G	A	rs2257791	22863734	3.56E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	118804993	rs10886031	C	T	rs10886031	20023658	4.48E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	KIAA1598
10	118804993	rs10886031	C	T	rs10886031	22863734	1.89E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
10	118827560	rs7078160	G	A	rs7078160	20023658	2.00E-08	NA	1.36	[1.21-1.53]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs7078160-A	Research Support, Non-U.S. Gov't	G	KIAA1598
10	118827560	rs7078160	G	A	rs7078160	20436469	9.66E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	118827560	rs7078160	G	A	rs7078160	22863734	4.00E-11	NA	1.38	[1.21-1.58]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs7078160-A	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	118827560	rs7078160	G	A	rs7078160	22863734	6.00E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs7078160-A	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	118828369	rs1898355	A	G	rs1898355	20023658	3.53E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	KIAA1598
10	118828369	rs1898355	A	G	rs1898355	22863734	7.46E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
10	118834991	rs4752028	C	T	rs4752028	20023658	2.67E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	KIAA1598
10	118834991	rs4752028	C	T	rs4752028	20436469	7.56E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	118834991	rs4752028	C	T	rs4752028	22863734	1.71E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
10	122008230	rs12243526	C	T	rs12243526	22419666	2.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	122008352	rs2026959	A	G	rs2026959	22419666	8.26E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	122015574	rs10886648	A	G	rs10886648	22419666	1.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	122264200	rs1536389	G	A	rs1536389	22419666	7.99E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	123325538	rs2912787	T	C	rs2912787	19270707	1.62E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G,A	FGFR2
10	123325794	rs3135730	T	C	rs3135730	19270707	9.27E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	FGFR2
10	123415590	rs11200059	T	C	rs11200059	20436469	6.81E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
10	125206483	rs12242236	C	T	rs12242236	22419666	2.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	129998372	rs1329189	T	C	rs1329189	22419666	5.00E-06	CLP	1.3	[1.47-1.16]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	132723132	rs7893744	A	G	rs7893744	22419666	4.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	132815843	rs7073330	C	T	rs7073330	22419666	3.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
10	132822263	rs2051113	C	T	rs2051113	22419666	1.88E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	2568846	rs2188198	T	A	rs2188198	22419666	8.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	8243026	rs10840002	A	G	rs10840002	20023658	2.39E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
11	13912746	rs1393878	A	G	rs1393878	22863734	9.94E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
11	21277762	rs10833483	T	C	rs10833483	22419666	7.87E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	21321305	rs10833498	T	C	rs10833498	22419666	8.40E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	21441271	rs12802424	G	A	rs12802424	22419666	1.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	22123113	rs7358426	A	G	rs7358426	22419666	9.31E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	23979808	rs4604882	A	C	rs4604882	22419666	9.00E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	28955481	rs17603351	T	C	rs17603351	22419666	9.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	32129891	rs10488686	G	A	rs10488686	22419666	9.76E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	49042866	rs7129890	G	T	rs7129890	22419666	2.09E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56113575	rs10896271	A	G	rs10896271	22419666	8.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56113593	rs10896272	C	A	rs10896272	22419666	5.17E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56167086	rs1945222	G	A	rs1945222	22419666	2.50E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56184888	rs998544	G	A	rs998544	22419666	3.47E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56185345	rs6591324	A	G	rs6591324	22419666	1.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56186430	rs1945205	T	C	rs1945205	22419666	2.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56269410	rs12577186	T	C	rs12577186	22419666	4.43E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56276235	rs679309	A	G	rs679309	22419666	3.58E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56421197	rs1397056	C	T	rs1397056	22419666	1.09E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56431216	rs11228710	C	T	rs11228710	22419666	1.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56438675	rs11228713	G	A	rs11228713	22419666	2.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56440236	rs11228719	C	T	rs11228719	22419666	4.00E-06	CP	1.64	[1.32-2.04]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56466099	rs1397048	C	T	rs1397048	22419666	3.03E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56483227	rs11228739	C	A	rs11228739	22419666	6.50E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56526100	rs10501357	T	C	rs10501357	22419666	6.32E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56542757	rs1943637	C	T	rs1943637	22419666	5.66E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	56542818	rs1943638	G	A	rs1943638	22419666	8.65E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	76442114	rs4393347	G	A	rs4393347	22419666	3.91E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	76442377	rs948455	C	A	rs948455	22419666	3.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	77154639	rs527589	C	T	rs527589	22419666	3.00E-06	CL_CLP	1.75	[1.37-2.22]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	84134019	rs1365425	G	A	rs1365425	20023658	3.66E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	DLG2
11	86438669	rs2513008	T	C	rs2513008	20023658	9.17E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
11	86489148	rs12802848	C	T	rs12802848	20023658	8.28E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
11	86496427	rs6592315	T	G	rs6592315	19270707	2.19E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
11	86504356	rs12799567	A	G	rs12799567	20023658	4.93E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
11	86508928	rs12805405	T	C	rs12805405	20023658	5.74E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
11	86515072	rs1939110	C	T	rs1939110	20023658	1.11E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PRSS23
11	93216751	rs2658801	G	A	rs2658801	22419666	1.19E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	94834270	rs4611172	G	T	rs4611172	22419666	6.18E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	108384207	rs2846412	C	T	rs2846412	22419666	5.65E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	108389285	rs7943820	C	T	rs7943820	22419666	8.24E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	112927742	rs1436108	C	A,G,T	rs1436108	22419666	9.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	113151790	rs10891527	C	T	rs10891527	20436469	4.68E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
11	115140553	rs7950069	G	A	rs7950069	22863734	5.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
11	116377625	rs12421717	T	A	rs12421717	22419666	6.56E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	117319720	rs11216396	A	G	rs11216396	22419666	7.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	119961694	rs617320	G	T	rs617320	20436469	7.64E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
11	119961694	rs617320	G	T	rs617320	22863734	1.54E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
11	128083424	rs4936041	G	A,T	rs4936041	22419666	8.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
11	129415217	rs923811	T	G	rs923811	22863734	6.95E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
11	129744252	rs1030467	T	C	rs1030467	20436469	2.58E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
11	129744872	rs1016364	A	G	rs1016364	20436469	5.56E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
11	131099798	rs1628402	G	A	rs1628402	19270707	8.79E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
11	133963216	rs1784394	T	C	rs1784394	20436469	3.57E-16	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
12	714842	rs722097	A	G	rs722097	22863734	1.78E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
12	1989355	rs11838338	G	A	rs11838338	22419666	2.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	1997181	rs4765855	C	T	rs4765855	22419666	1.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	5031590	rs4766312	T	C	rs4766312	22419666	9.72E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	7175047	rs1143664	A	C,G,T	rs1143664	22419666	8.33E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	9916546	rs3136560	G	A	rs3136560	22863734	1.48E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
12	23714022	rs4559766	T	C	rs4559766	20023658	2.34E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	SOX5
12	31513999	rs2090772	G	A	rs2090772	22419666	5.41E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	42859588	rs11832772	C	T	rs11832772	20023658	3.21E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PRICKLE1
12	43077486	rs1554255	T	C	rs1554255	22863734	1.62E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
12	43090701	rs7304375	T	C	rs7304375	22863734	1.27E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
12	53356411	rs727266	C	T	rs727266	22863734	9.82E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
12	70041122	rs1867445	C	T	rs1867445	22863734	1.22E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
12	70054910	rs1373453	A	G	rs1373453	22863734	2.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
12	70066280	rs17106937	A	G	rs17106937	22863734	1.60E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
12	70080153	rs12322558	A	G	rs12322558	22863734	7.84E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
12	82927005	rs10506874	G	A	rs10506874	22419666	3.51E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	82957844	rs11832758	G	A	rs11832758	22419666	6.40E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	82967011	rs17720596	A	C	rs17720596	22419666	9.20E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	87674351	rs7968238	G	A	rs7968238	22419666	9.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	90977131	rs2051713	C	T	rs2051713	22419666	4.18E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	96274690	rs2196457	A	G	rs2196457	22419666	5.07E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	106691577	rs6539264	A	G	rs6539264	22863734	3.33E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
12	106700584	rs1532586	G	A	rs1532586	22863734	2.25E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
12	107499272	rs12315175	T	C	rs12315175	22419666	4.01E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	107690351	rs7310294	T	C	rs7310294	22419666	6.74E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	125033933	rs12423712	G	A	rs12423712	22419666	1.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	126895488	rs11058637	T	C	rs11058637	22419666	2.83E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
12	129498317	rs519579	A	G	rs519579	22419666	1.65E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	20908370	rs17475847	C	T	rs17475847	22863734	2.24E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
13	24654228	rs17079928	G	A	rs17079928	22419666	6.00E-06	CL_CLP	1.33	[1.52-1.18]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	25194771	rs4769376	G	T	rs4769376	22863734	2.91E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	35204094	rs7337690	A	G	rs7337690	22419666	4.42E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	37358108	rs7997612	A	G	rs7997612	22419666	4.96E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	37363659	rs9566164	G	A	rs9566164	22419666	5.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	41013977	rs941823	T	C	rs941823	22863734	5.92E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	46433501	rs9534241	T	G	rs9534241	22419666	7.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	46536291	rs12585823	A	G	rs12585823	22419666	2.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	48392133	rs17070878	T	C	rs17070878	22419666	4.40E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	49516872	rs4313714	G	T	rs4313714	22419666	3.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	51839210	rs973837	C	T	rs973837	22419666	9.84E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	66284987	rs9571456	C	T	rs9571456	22419666	5.61E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	66821916	rs9592458	G	A	rs9592458	22419666	9.05E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	70658404	rs1550546	T	C	rs1550546	20023658	5.47E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	KLHL1
13	73799611	rs17089968	C	T	rs17089968	22419666	3.23E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	74773253	rs4356363	A	G	rs4356363	22419666	8.58E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	77101905	rs9530556	T	C	rs9530556	22863734	5.07E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	77123533	rs10492453	A	G	rs10492453	22863734	9.90E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80440491	rs4885678	G	T	rs4885678	22863734	4.49E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80668874	rs9574565	T	C	rs9574565	20023658	3.00E-07	NA	1.31	[1.01-1.70]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs9574565-C	Research Support, Non-U.S. Gov't	T	NA
13	80668874	rs9574565	T	C	rs9574565	22863734	3.80E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80673191	rs9601318	C	T	rs9601318	22863734	5.84E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80676704	rs1575900	A	C	rs1575900	20023658	6.34E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
13	80676704	rs1575900	A	C	rs1575900	22863734	1.74E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80679302	rs11841646	T	A	rs11841646	22863734	4.71E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80683625	rs1327314	A	G	rs1327314	22863734	2.46E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80689877	rs1409904	G	A	rs1409904	22863734	3.77E-10	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80690135	rs9318679	C	A	rs9318679	20023658	2.96E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
13	80690135	rs9318679	C	A	rs9318679	22863734	4.08E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80691352	rs1215465	C	T	rs1215465	20023658	3.12E-07	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
13	80691352	rs1215465	C	T	rs1215465	22863734	7.69E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80692811	rs8001641	G	A	rs8001641	19270707	3.13E-06	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
13	80692811	rs8001641	G	A	rs8001641	20023658	2.83E-07	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
13	80692811	rs8001641	G	A	rs8001641	20436469	1.61E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	80692811	rs8001641	G	A	rs8001641	22863734	3.00E-10	NA	1.31	[1.13-1.51]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs8001641-A	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80692811	rs8001641	G	A	rs8001641	22863734	9.00E-11	NA	1.35	[1.14-1.61]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs8001641-A	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80697435	rs11617692	A	T	rs11617692	22863734	8.43E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T,A
13	80698988	rs17215941	T	C	rs17215941	22863734	7.98E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80699166	rs9545330	A	G	rs9545330	20023658	1.32E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
13	80699166	rs9545330	A	G	rs9545330	22863734	2.17E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80700397	rs9601323	G	A	rs9601323	22863734	5.11E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80701076	rs11842594	G	C	rs11842594	22863734	3.83E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	80701485	rs1854110	T	C	rs1854110	22863734	1.96E-11	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
13	80701848	rs942233	C	T	rs942233	20023658	5.74E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
13	80701848	rs942233	C	T	rs942233	22863734	3.34E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	80702065	rs4146682	A	G	rs4146682	22863734	3.86E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
13	97112165	rs7995242	G	A	rs7995242	22419666	7.63E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
13	100238193	rs17473024	T	C	rs17473024	20436469	9.49E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	100317494	rs12427494	T	C	rs12427494	20436469	3.56E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	100352798	rs12184508	T	C	rs12184508	20436469	4.94E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	100635606	rs1334586	G	A	rs1334586	20436469	3.66E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	100638392	rs13542	G	A	rs13542	20436469	9.33E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
13	100638392	rs13542	G	A	rs13542	22863734	1.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
13	104577309	rs9555012	T	C	rs9555012	22419666	4.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	31271487	rs2518659	A	G	rs2518659	20023658	5.66E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
14	31271487	rs2518659	A	G	rs2518659	22863734	1.09E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
14	31276114	rs2213951	A	G	rs2213951	22863734	7.55E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
14	34501834	rs1769582	A	G	rs1769582	22419666	6.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	37279716	rs848086	G	A	rs848086	22419666	9.87E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	45149546	rs1959515	G	A	rs1959515	22419666	8.46E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	52989228	rs745080	G	A	rs745080	22419666	8.00E-07	CP	1.59	[1.32-1.92]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	53023607	rs7144509	G	A	rs7144509	22419666	2.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	59351820	rs10134508	C	T	rs10134508	22419666	8.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	73029178	rs2074647	G	A	rs2074647	22419666	1.48E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	76587800	rs2591089	A	C	rs2591089	22419666	5.08E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	76588286	rs2543356	T	C	rs2543356	22419666	2.02E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	78400320	rs8009619	T	G	rs8009619	22863734	8.08E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
14	88719598	rs10150163	A	G	rs10150163	22419666	4.48E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	88720908	rs2401756	G	A	rs2401756	22419666	6.84E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	92556055	rs17807815	T	C	rs17807815	22419666	6.00E-06	CP	2.38	[1.59-3.57]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	94641867	rs1956455	G	T	rs1956455	20023658	2.66E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PPP4R4
14	95361689	rs1768112	G	A	rs1768112	20023658	4.85E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
14	95362696	rs1341001	A	G	rs1341001	20023658	6.83E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
14	102381357	rs3783369	A	G	rs3783369	22419666	1.21E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	102385457	rs3783370	C	T	rs3783370	22419666	1.64E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	102800203	rs17100811	C	A	rs17100811	22419666	6.49E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
14	104979486	rs4264325	T	C	rs4264325	22419666	3.39E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	32952193	rs8023613	G	T	rs8023613	20023658	3.28E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	SCG5
15	32993645	rs16969816	G	A	rs16969816	20023658	4.27E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
15	33043455	rs1919360	C	T	rs1919360	22863734	9.85E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	33043657	rs1919362	C	T	rs1919362	20023658	2.44E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
15	33043657	rs1919362	C	T	rs1919362	22863734	2.80E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	33050423	rs1258763	C	T	rs1258763	20023658	1.00E-06	NA	1.52	[1.23-1.86]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs1258763-A	Research Support, Non-U.S. Gov't	G	NA
15	33050423	rs1258763	C	T	rs1258763	22863734	2.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	33060407	rs2840190	G	A	rs2840190	20023658	4.91E-06	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	FMN1
15	33063809	rs3743106	T	G	rs3743106	19270707	2.10E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	FMN1
15	33063809	rs3743106	T	G	rs3743106	20023658	1.63E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	FMN1
15	33063809	rs3743106	T	G	rs3743106	22863734	2.34E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	33213273	rs11635135	A	G	rs11635135	20023658	4.53E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	FMN1
15	33213273	rs11635135	A	G	rs11635135	22863734	3.61E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
15	34281623	rs8042524	T	C	rs8042524	22419666	8.83E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	34281733	rs17236700	C	T	rs17236700	22419666	8.89E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	49231111	rs12323963	G	A	rs12323963	22419666	5.35E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	49301293	rs7167402	A	C	rs7167402	22419666	4.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	49323855	rs8029751	A	C	rs8029751	22419666	4.72E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	49396864	rs12148348	T	C	rs12148348	22419666	2.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	49625930	rs10851475	A	G	rs10851475	22419666	2.06E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	55290575	rs1528470	C	T	rs1528470	22419666	5.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	55984265	rs11852746	T	C	rs11852746	20023658	2.86E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PRTG
15	55987498	rs1011061	A	G	rs1011061	20023658	1.21E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PRTG
15	61870836	rs7497302	T	C	rs7497302	22419666	7.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	63167484	rs4775555	G	A	rs4775555	22419666	7.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	63303416	rs1906779	G	A	rs1906779	20023658	9.12E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
15	63308583	rs8029221	C	T	rs8029221	22863734	5.58E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	63311425	rs4774467	T	C	rs4774467	22863734	3.20E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	63311495	rs4775599	A	G	rs4775599	22863734	2.67E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
15	63311927	rs4774469	G	A	rs4774469	22863734	6.46E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G,A
15	63311940	rs4775600	A	G	rs4775600	22863734	6.46E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	63311980	rs4775601	T	C	rs4775601	22863734	8.86E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	63312119	rs4774470	G	A	rs4774470	22863734	6.34E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
15	63312428	rs1873149	C	A	rs1873149	22863734	5.83E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	63312632	rs1873147	G	A	rs1873147	20023658	7.04E-07	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
15	63312632	rs1873147	G	A	rs1873147	22863734	8.00E-07	NA	1.43	[1.23-1.67]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs1873147-C	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	63312695	rs7179658	T	C	rs7179658	22863734	6.54E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	63313581	rs12440411	T	G	rs12440411	22863734	5.65E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	63313596	rs12443285	C	T	rs12443285	22863734	5.65E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	63313666	rs12443295	C	T	rs12443295	22863734	6.34E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	63314519	rs2130165	C	T	rs2130165	22863734	5.83E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	63316212	rs6494383	G	A	rs6494383	22863734	4.04E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
15	63325548	rs2899687	C	T	rs2899687	22863734	2.46E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
15	63327533	rs11071718	C	A	rs11071718	22863734	5.21E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
15	68060389	rs745213	T	G	rs745213	20023658	8.65E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	MAP2K5
15	68090700	rs11856999	C	T	rs11856999	22419666	6.34E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	84129515	rs6602977	A	G	rs6602977	22419666	9.47E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
15	100889496	rs2289584	T	G	rs2289584	20023658	9.53E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	FLJ42289
15	100912913	rs12915188	T	C	rs12915188	20023658	3.46E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
15	101089573	rs12915921	C	T	rs12915921	22419666	3.54E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	349293	rs214246	A	G	rs214246	22419666	7.21E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	3980445	rs8049367	T	C	rs8049367	22863734	8.74E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
16	6456763	rs1003677	A	G	rs1003677	22863734	8.61E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
16	7459614	rs10500356	T	C	rs10500356	19270707	7.21E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	RBFOX1
16	7585001	rs10459845	T	G	rs10459845	22419666	7.16E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	8906539	rs3826198	C	A	rs3826198	22419666	3.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	9332725	rs1876950	A	G	rs1876950	20436469	7.73E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
16	9341096	rs959228	G	A	rs959228	20436469	9.03E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
16	9356311	rs7190139	T	G	rs7190139	20436469	9.47E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
16	9744095	rs17550532	A	G	rs17550532	22419666	2.50E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	11753423	rs9927281	G	A	rs9927281	22419666	4.13E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	17573100	rs7197376	C	T	rs7197376	22419666	5.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	19244424	rs6497337	A	G	rs6497337	22419666	7.25E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	19246524	rs8054408	G	A	rs8054408	22419666	5.30E-06	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	19268837	rs732999	C	T	rs732999	22419666	1.96E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	23135775	rs17797149	G	A	rs17797149	20023658	1.87E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	USP31
16	23885840	rs11645672	T	G	rs11645672	22419666	7.60E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	24261165	rs12149348	T	C	rs12149348	22419666	3.36E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	30034524	rs4788213	T	C	rs4788213	20436469	6.16E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
16	32137965	rs12927233	T	C	rs12927233	22863734	5.21E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
16	50811964	rs16948813	G	A	rs16948813	22419666	1.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	54856671	rs4435250	C	T	rs4435250	22863734	1.64E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
16	62285364	rs16964413	C	T	rs16964413	20023658	5.57E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
16	62535243	rs1394551	A	G	rs1394551	20023658	4.65E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
16	73012164	rs11075954	T	C	rs11075954	22419666	1.48E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
16	79161842	rs7498200	A	G	rs7498200	22419666	9.26E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	2251059	rs7213791	G	A	rs7213791	22419666	5.47E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	4744823	rs11651691	T	A,C,G	rs11651691	22419666	7.71E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	8871542	rs11078772	C	A	rs11078772	22863734	3.23E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	8914693	rs2872615	T	C	rs2872615	20436469	2.33E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8914693	rs2872615	T	C	rs2872615	22863734	4.73E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
17	8919630	rs9788972	G	A	rs9788972	20436469	6.00E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8919630	rs9788972	G	A	rs9788972	22863734	2.49E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	8920599	rs4791330	T	C	rs4791330	20436469	6.81E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8929845	rs1880646	A	G	rs1880646	20436469	1.82E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8929845	rs1880646	A	G	rs1880646	22863734	3.96E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
17	8932082	rs4791331	C	T	rs4791331	20436469	6.41E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8943929	rs8076457	T	C	rs8076457	22863734	2.00E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	8952894	rs9915089	C	T	rs9915089	20436469	6.90E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8956285	rs8069536	G	T	rs8069536	20436469	4.41E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8956285	rs8069536	G	T	rs8069536	22863734	1.28E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	8965551	rs8081823	G	A	rs8081823	20436469	2.49E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	8965551	rs8081823	G	A	rs8081823	22863734	7.49E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
17	9005393	rs4791779	A	G	rs4791779	22419666	5.73E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	10163569	rs4791959	A	G	rs4791959	22419666	1.08E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	10168780	rs4791962	A	G	rs4791962	22419666	9.39E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	13130956	rs8064833	T	C	rs8064833	22419666	7.40E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	15075605	rs9906227	A	G	rs9906227	22419666	5.29E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	16899313	rs9630717	G	T	rs9630717	22419666	1.19E-07	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	32164169	rs183412	T	C	rs183412	22419666	5.28E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	32977717	rs11650365	G	A	rs11650365	22419666	4.71E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	35189091	rs17138064	G	A	rs17138064	22419666	5.00E-07	CP	1.92	[1.47-2.50]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	48023393	rs4793622	C	A	rs4793622	19270707	2.26E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
17	54615617	rs17760296	T	G	rs17760296	20023658	7.00E-06	NA	1.5	[1.32-1.69]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs17760296-G	Research Support, Non-U.S. Gov't	T	NA
17	54615617	rs17760296	T	G	rs17760296	22863734	2.65E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
17	54743099	rs12936596	G	T	rs12936596	22863734	6.56E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	54749558	rs12451251	C	T	rs12451251	22863734	5.62E-04	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
17	54760614	rs12951993	A	G	rs12951993	22863734	3.94E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
17	54767548	rs1029723	G	A	rs1029723	22863734	1.44E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	54773238	rs227731	T	G	rs227731	20023658	1.00E-08	NA	1.38	[1.21-1.56]	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs227731-C	Research Support, Non-U.S. Gov't	C	NA
17	54773238	rs227731	T	G	rs227731	20436469	4.67E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
17	54773238	rs227731	T	G	rs227731	22863734	2.00E-08	NA	1.23	[1.08-1.40]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs227731-C	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	54773951	rs227730	T	C	rs227730	20023658	4.83E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	NA
17	54773951	rs227730	T	C	rs227730	22863734	6.27E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
17	54778904	rs227723	C	T	rs227723	20023658	6.54E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
17	54778904	rs227723	C	T	rs227723	22863734	2.88E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	54828295	rs12150403	C	A	rs12150403	22419666	7.22E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	61141953	rs8071332	A	G	rs8071332	22863734	5.30E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
17	62754586	rs9908143	T	C	rs9908143	20023658	5.04E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	LOC146880
17	62754586	rs9908143	T	C	rs9908143	22863734	5.07E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	62764047	rs2007530	C	T	rs2007530	20023658	2.67E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	LOC146880
17	62764047	rs2007530	C	T	rs2007530	22863734	4.46E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	62784028	rs1808191	A	C	rs1808191	20023658	2.81E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	PLEKHM1P
17	62784028	rs1808191	A	C	rs1808191	22863734	4.56E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
17	69824561	rs733383	G	T	rs733383	22419666	2.53E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	73702253	rs2305529	G	A	rs2305529	22863734	4.78E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
17	73704333	rs3744000	C	T	rs3744000	22863734	5.48E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C,T
17	77276078	rs12449931	T	C	rs12449931	22419666	4.93E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
17	80607989	rs4789817	A	G	rs4789817	22863734	4.93E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
18	7038462	rs522402	C	T	rs522402	22863734	1.90E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
18	7081724	rs16951201	G	A	rs16951201	22419666	6.66E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	8218296	rs12965261	G	A	rs12965261	19270707	9.93E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	PTPRM
18	8220827	rs976168	T	C	rs976168	19270707	3.87E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	PTPRM
18	8227344	rs4399595	G	A	rs4399595	19270707	8.50E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	A	PTPRM
18	8227954	rs12954626	T	C	rs12954626	19270707	8.30E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	PTPRM
18	12274697	rs7230480	T	C	rs7230480	22419666	8.89E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	23583173	rs9952224	T	G	rs9952224	19270707	8.68E-05	NA	NA	NA	224 cases; 383 controls	NOPOP(607)	ALL(607)	NOPOP(607)	ALL(607)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	T	NA
18	27857785	rs2949535	A	G	rs2949535	22419666	2.40E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	29160752	rs1616887	A	G	rs1616887	20436469	3.95E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
18	29172476	rs723744	G	T	rs723744	20436469	4.84E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
18	29186128	rs1667254	C	T	rs1667254	20436469	2.41E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
18	29190174	rs4799585	C	T	rs4799585	20436469	8.81E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
18	34101676	rs903736	G	T	rs903736	22863734	2.31E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
18	45319554	rs2852945	C	T	rs2852945	20436469	4.15E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
18	45319554	rs2852945	C	T	rs2852945	22863734	5.77E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
18	57398775	rs1629874	C	T	rs1629874	22419666	7.18E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	61825851	rs6567414	A	G	rs6567414	22419666	8.78E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	63666356	rs2041939	C	T	rs2041939	22419666	4.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	65526817	rs633865	C	A	rs633865	22419666	7.13E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	66752454	rs1991676	A	G	rs1991676	22419666	1.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
18	69439073	rs17085106	G	T	rs17085106	19656524	4.00E-08	NA	4.07	[2.37-7.00]	111 European ancestry cases; 5,951 European ancestry controls	European(6062)	ALL(6062)	EUR(6062)	ALL(6062)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
18	75399395	rs9807163	C	A	rs9807163	20023658	9.09E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	C	NA
19	3590334	rs17348907	A	G	rs17348907	22419666	3.99E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	7504404	rs8110645	C	T	rs8110645	20436469	7.62E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
19	11625280	rs17001450	G	A	rs17001450	22419666	6.70E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	15039616	rs715158	T	G	rs715158	22419666	4.64E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	18747605	rs3764628	G	T	rs3764628	22419666	4.00E-06	CL	1.89	[2.50-1.43]	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	18780799	rs3795027	C	T	rs3795027	22419666	1.75E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	19126913	rs2285851	G	T	rs2285851	22419666	3.82E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	21420882	rs634661	T	C	rs634661	22419666	8.03E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	22407824	rs281205	T	C	rs281205	22419666	1.79E-04	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	29785848	rs4805363	T	C	rs4805363	22419666	8.35E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	33545701	rs6510337	C	T	rs6510337	20436469	5.76E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
19	33545701	rs6510337	C	T	rs6510337	22863734	3.85E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
19	35719020	rs541169	C	T	rs541169	20023658	6.01E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	FAM187B
19	47025655	rs10408465	T	C	rs10408465	22419666	4.27E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	49206603	rs281377	C	T	rs281377	22419666	7.37E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	52172109	rs10408696	C	T	rs10408696	22419666	9.40E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
19	54785593	rs380573	A	G	rs380573	22419666	9.51E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	1349052	rs6134733	C	T	rs6134733	22419666	2.14E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	2364386	rs1967678	C	T	rs1967678	22419666	7.86E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	9493480	rs4816144	C	T	rs4816144	22419666	4.05E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	12088568	rs6041093	A	G	rs6041093	22419666	9.15E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	12118793	rs8119501	G	A	rs8119501	22419666	6.31E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	14866618	rs6079596	G	T	rs6079596	22419666	3.87E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	15695993	rs11700244	C	A	rs11700244	20436469	6.03E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	24742663	rs2424676	G	A	rs2424676	20023658	8.51E-05	NA	NA	NA	399 European origin cases; 1,318 European origin controls	European(1717)	ALL(1717)	EUR(1717)	ALL(1717)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Research Support, Non-U.S. Gov't	G	NA
20	36587883	rs16987050	C	T	rs16987050	22419666	9.11E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	38849642	rs1321333	A	G	rs1321333	22419666	8.55E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	39255548	rs6029228	T	G	rs6029228	20436469	1.67E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39255548	rs6029228	T	G	rs6029228	22863734	4.76E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
20	39261054	rs6072081	A	G	rs6072081	20436469	1.14E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39261054	rs6072081	A	G	rs6072081	22863734	9.13E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
20	39261979	rs6065259	G	A	rs6065259	20436469	1.25E-09	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39261979	rs6065259	G	A	rs6065259	22863734	1.40E-07	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
20	39268185	rs6102074	G	T	rs6102074	20436469	5.83E-07	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39268185	rs6102074	G	T	rs6102074	22863734	6.90E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
20	39268516	rs17820943	C	T	rs17820943	20436469	3.09E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39268516	rs17820943	C	T	rs17820943	22863734	1.09E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
20	39269074	rs13041247	T	C	rs13041247	20436469	1.62E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39269074	rs13041247	T	C	rs13041247	22863734	6.00E-09	NA	1.19	[1.06-1.35]	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	rs13041247-T	Meta-Analysis	Research Support, Non-U.S. Gov't	T
20	39270816	rs11696257	C	T	rs11696257	20436469	1.96E-11	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39270816	rs11696257	C	T	rs11696257	22863734	8.02E-09	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
20	39274083	rs11698025	G	A	rs11698025	20436469	5.18E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39275892	rs6072087	T	C	rs6072087	22863734	3.70E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	T
20	39281629	rs6102085	G	A	rs6102085	20436469	1.86E-08	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39281629	rs6102085	G	A	rs6102085	22863734	6.90E-08	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
20	39282720	rs6016404	A	C	rs6016404	20436469	1.29E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	39282720	rs6016404	A	C	rs6016404	22863734	1.22E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
20	40987533	rs6072697	T	C	rs6072697	22419666	5.52E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	45858421	rs3746488	C	T	rs3746488	22419666	6.71E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	49363182	rs2064278	G	T	rs2064278	20436469	1.13E-05	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	49363182	rs2064278	G	T	rs2064278	22863734	2.79E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
20	49375242	rs6122972	A	G	rs6122972	20436469	9.72E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
20	49375242	rs6122972	A	G	rs6122972	22863734	9.82E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	A
20	53222217	rs967377	T	C	rs967377	22419666	6.79E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
20	57769962	rs194869	C	T	rs194869	22419666	9.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
21	25427744	rs1910670	A	C	rs1910670	22419666	1.47E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
21	25429900	rs2253239	C	T	rs2253239	22419666	6.57E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
21	25431019	rs2844315	T	G	rs2844315	22419666	5.72E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
21	34555833	rs2834132	G	A	rs2834132	22863734	9.96E-05	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	G
21	35825266	rs1012944	A	G	rs1012944	22419666	4.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
21	41020752	rs11700951	A	G	rs11700951	22419666	8.37E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	20258973	rs9606305	G	A	rs9606305	22419666	5.63E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	29490148	rs1540900	T	C	rs1540900	22419666	4.12E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	35010255	rs9621978	A	G	rs9621978	22419666	2.21E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	39780961	rs1043395	C	T	rs1043395	22419666	8.90E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	45150659	rs5765956	C	T	rs5765956	20436469	5.94E-06	NA	NA	NA	825 European ancestry trios; 1,038 Asian ancestry trios	Asia(1038)	European(825)	ALL(1863)	ASN(1038)	EUR(825)	ALL(1863)	Cleft lip	HPOID:0000202	Oral cleft	DOID:9296	cleft lip	D002971	Cleft Lip	EFOID:0003959	cleft lip	Cleft palate	NA	Research Support, N.I.H., Extramural
22	45150659	rs5765956	C	T	rs5765956	22863734	2.00E-06	NA	NA	NA	Up to 666 European ancestry trios; 399 European ancestry cases; 1,318 European ancestry controls	European(2383)	ALL(2383)	EUR(2383)	ALL(2383)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate	NA	Meta-Analysis	Research Support, Non-U.S. Gov't	C
22	46976557	rs11090889	G	A	rs11090889	22419666	4.04E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate
22	48510196	rs16998380	T	C	rs16998380	22419666	4.60E-05	NA	NA	NA	1,094 European ancestry trials; 1,277 Asian ancestry trials; 87 other ancestry trials	NOPOP(87)	Asia(1277)	European(1094)	ALL(2458)	NOPOP(87)	ASN(1277)	EUR(1094)	ALL(2458)	Orofacial clefts	HPOID:0000202	Oral cleft	DOID:0050567	orofacial cleft	D002971	Cleft Lip	EFOID:0003959	progranulin measurement	Cleft palate

Mapped by lexical matching(Total Items:0)
(Waiting for update.)

Mapped by homologous gene(Total Items:0)
(Waiting for update.)

Chemical(Total Drugs:8)
CUI	ChemicalName	ChemicalID	CasRN	DiseaseName	DiseaseID	DirectEvidence	PubMedIDs
C0008924	carbamazepine	D002220	298-46-4	cleft lip	MESH:D002971	marker/mechanism	2492459
C0008924	folic acid	D005492	59-30-3	cleft lip	MESH:D002971	marker/mechanism	21254359
C0008924	folic acid	D005492	59-30-3	cleft lip	MESH:D002971	therapeutic	11096168
C0008924	phenytoin	D010672	57-41-0	cleft lip	MESH:D002971	marker/mechanism	2227380
C0008924	pyridoxine	D011736	-	cleft lip	MESH:D002971	therapeutic	14991264
C0008924	tretinoin	D014212	302-79-4	cleft lip	MESH:D002971	marker/mechanism	9535508
C0008924	valproic acid	D014635	99-66-1	cleft lip	MESH:D002971	marker/mechanism	15794725
C0008924	thiamine	D013831	59-43-8	cleft lip	MESH:D002971	therapeutic	14991264

FDA approved drug and dosage information(Total Drugs:0)
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FDA labeling changes(Total Drugs:0)
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