alexander disease |
Disease ID | 116 |
---|---|
Disease | alexander disease |
Definition | A rare genetic neurodegenerative disorder which belongs to the group of leukodystrophies. It has a slow and progressive clinical course and is characterized by developmental delay, macrocephaly, seizures, dementia and spasticity. |
Synonym | alexander disease [disease/finding] alexander's disease alexander's disease (disorder) alexanders disease alxdrd demyelinogenic leukodystrophy dysmyelinogenic leukodystrophy fibrinoid degeneration of astrocytes fibrinoid leukodystrophy leukodystrophy with rosenthal fibers |
Orphanet | |
OMIM | |
DOID | |
UMLS | C0270726 |
MeSH | |
SNOMED-CT | |
Comorbidity | UMLS | Disease | Sentences' Count(Total Sentences:1) |
Curated Gene | Entrez_id | Symbol | Resource(Total Genes:2) |
Inferring Gene | (Waiting for update.) |
Text Mined Gene | Entrez_id | Symbol | Score | Resource(Total Genes:53) 410 | ARSA | DISEASES 10423 | CDIPT | DISEASES 1410 | CRYAB | DISEASES 23435 | TARDBP | DISEASES 8139 | GAN | DISEASES 3315 | HSPB1 | DISEASES 3976 | LIF | DISEASES 4294 | MAP3K10 | DISEASES 2670 | GFAP | DISEASES 3337 | DNAJB1 | DISEASES 4001 | LMNB1 | DISEASES 492 | ATP2B3 | DISEASES 9175 | MAP3K13 | DISEASES 839 | CASP6 | DISEASES 3073 | HEXA | DISEASES 6567 | SLC16A2 | DISEASES 6506 | SLC1A2 | DISEASES 146433 | IL34 | DISEASES 152185 | SPICE1 | DISEASES 8988 | HSPB3 | DISEASES 8419 | BFSP2 | DISEASES 5354 | PLP1 | DISEASES 23209 | MLC1 | DISEASES 1827 | RCAN1 | DISEASES 4723 | NDUFV1 | DISEASES 5339 | PLEC | DISEASES 10013 | HDAC6 | DISEASES 23336 | SYNM | DISEASES 3064 | HTT | DISEASES 1785 | DNM2 | DISEASES 2571 | GAD1 | DISEASES 54413 | NLGN3 | DISEASES 5599 | MAPK8 | DISEASES 6663 | SOX10 | DISEASES 2475 | MTOR | DISEASES 57165 | GJC2 | DISEASES 3766 | KCNJ10 | DISEASES 10763 | NES | DISEASES 5654 | HTRA1 | DISEASES 2730 | GCLM | DISEASES 9211 | LGI1 | DISEASES 5730 | PTGDS | DISEASES 2170 | FABP3 | DISEASES 1282 | COL4A1 | DISEASES 199 | AIF1 | DISEASES 631 | BFSP1 | DISEASES 152007 | GLIPR2 | DISEASES 3083 | HGFAC | DISEASES 1654 | DDX3X | DISEASES 8450 | CUL4B | DISEASES 5601 | MAPK9 | DISEASES 3908 | LAMA2 | DISEASES 3316 | HSPB2 | DISEASES |
Locus | (Waiting for update.) |
Disease ID | 116 |
---|---|
Disease | alexander disease |
Integrated Phenotype | HPO | Name(Total Integrated Phenotypes:67) HP:0002808 | Kyphosis HP:0001618 | Dysphonia HP:0001274 | Agenesis of corpus callosum HP:0100729 | Large face HP:0002514 | Cerebral calcification HP:0000470 | Short neck HP:0007162 | Diffuse demyelination of the cerebral white matter HP:0001324 | Muscle weakness HP:0002015 | Dysphagia HP:0002019 | Constipation HP:0003307 | Hyperlordosis HP:0002607 | Bowel incontinence HP:0100247 | Recurrent singultus HP:0100716 | Self-injurious behavior HP:0000496 | Abnormality of eye movement HP:0002353 | EEG abnormality HP:0004481 | Progressively abnormally enlarging cranium HP:0001251 | Ataxia HP:0007481 | Hyperpigmented nevi HP:0002357 | Dysphasia HP:0000238 | Nonsyndromal hydrocephalus HP:0002376 | Loss of developmental milestones HP:0000822 | Hypertension HP:0000819 | Diabetes mellitus HP:0001250 | Seizures HP:0000238 | Hydrocephalus HP:0002093 | Respiratory insufficiency HP:0000508 | Ptosis HP:0002445 | Tetraplegia HP:0001257 | Spasticity HP:0001252 | Muscular hypotonia HP:0001260 | Dysarthria HP:0002376 | Developmental regression HP:0007256 | Abnormal pyramidal signs HP:0010535 | Sleep apnea HP:0001355 | Megalencephaly HP:0002007 | Frontal bossing HP:0001645 | Sudden cardiac death HP:0000716 | Depression HP:0002615 | Hypotension HP:0010628 | Facial palsy HP:0002045 | Hypothermia HP:0000256 | Macrocephaly HP:0000975 | Hyperhidrosis HP:0002169 | Clonus HP:0002167 | Neurological speech impairment HP:0000821 | Hypothyroidism HP:0000938 | Osteopenia HP:0002017 | Nausea and vomiting HP:0000651 | Diplopia HP:0002072 | Chorea HP:0002383 | Encephalitis HP:0001347 | Hyperreflexia HP:0000712 | Emotional lability HP:0000639 | Nystagmus HP:0002483 | Bulbar signs HP:0002410 | Aqueductal stenosis HP:0002922 | Increased CSF protein HP:0002650 | Scoliosis HP:0002360 | Sleep disturbance HP:0002459 | Dysautonomia HP:0001249 | Intellectual disability HP:0001508 | Failure to thrive HP:0000218 | High palate HP:0001288 | Gait disturbance HP:0000826 | Precocious puberty HP:0001337 | Tremor |
Text Mined Phenotype | HPO | Name | Sentences' Count(Total Phenotypes:6) |
Disease ID | 116 |
---|---|
Disease | alexander disease |
Manually Symptom | UMLS | Name(Total Manually Symptoms:2) |
Text Mined Symptom | (Waiting for update.) |
Manually Genotype(Total Text Mining Genotypes:0) |
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(Waiting for update.) |
All Snps(Total Genotypes:109) | |||||||||||||
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snpId | pubmedId | geneId | geneSymbol | diseaseId | sourceId | sentence | score | Year | geneSymbol_dbSNP | CHROMOSOME | POS | REF | ALT |
rs112611995 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913433 | G | C |
rs121909717 | 18685083 | 2670 | GFAP | umls:C0270726 | BeFree | Indeed, two other assembly-compromised GFAP constructs, namely enhanced green fluorescent protein (eGFP)-tagged GFAP and the Alexander disease-causing GFAP mutant, R416W GFAP both showed similar in vitro assembly characteristics to GFAP-delta and could also be incorporated into endogenous filament networks in transfected cells, providing expression levels were kept low. | 0.52654694 | 2008 | GFAP | 17 | 44908075 | G | T,A |
rs121909717 | 16826512 | 2670 | GFAP | umls:C0270726 | BeFree | Collectively, these data confirm that the effects of the R416W GFAP are dominant, changing the assembly process in a way that encourages aberrant filament-filament interactions that then lead to protein aggregation and chaperone sequestration as early events in Alexander disease. | 0.52654694 | 2006 | GFAP | 17 | 44908075 | G | T,A |
rs121909717 | 24742911 | 2670 | GFAP | umls:C0270726 | BeFree | The child was found to harbor the R416W mutation, one of the most prevalent mutations in the glial fibrillary acidic protein (GFAP) gene that causes Alexander disease. | 0.52654694 | 2014 | GFAP | 17 | 44908075 | G | T,A |
rs121909717 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44908075 | G | T,A |
rs121909717 | 14550921 | 2670 | GFAP | umls:C0270726 | BeFree | A case of adult-onset Alexander disease with Arg416Trp human glial fibrillary acidic protein gene mutation. | 0.52654694 | 2003 | GFAP | 17 | 44908075 | G | T,A |
rs121909718 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911277 | C | G |
rs121909719 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911751 | C | A |
rs121909720 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915253 | G | T |
rs267607500 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913430 | C | T,G |
rs267607501 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | NA | NA | NA | NA | NA |
rs267607502 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911266 | T | C |
rs267607503 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911272 | G | A |
rs267607504 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915266 | A | G |
rs267607505 | 17960815 | 2670 | GFAP | umls:C0270726 | BeFree | A novel glial fibrillary acidic protein (GFAP) mutation, Y257C, is reported in a patient with adult-onset Alexander disease. | 0.52654694 | 2008 | GFAP | 17 | 44913279 | T | C |
rs267607505 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913279 | T | C |
rs267607506 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915240 | A | G |
rs267607507 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913733 | C | T |
rs267607508 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44908128 | G | T |
rs267607509 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915105 | C | T |
rs267607510 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915278 | C | T |
rs267607511 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911287 | A | G |
rs267607512 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911237 | G | C,A |
rs267607513 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911375 | G | C |
rs267607514 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911369 | C | T |
rs267607515 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911293 | A | T,G |
rs267607516 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915185 | A | G |
rs267607517 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44910638 | G | T,A |
rs267607518 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915228 | C | G,A |
rs267607518 | 21822933 | 2670 | GFAP | umls:C0270726 | BeFree | Late-onset Alexander disease with a V87L mutation in glial fibrillary acidic protein (GFAP) and calcifying lesions in the sub-cortex and cortex. | 0.52654694 | 2012 | GFAP | 17 | 44915228 | C | G,A |
rs267607519 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913310 | A | G |
rs267607520 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44908071 | T | G |
rs267607521 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44907369 | T | A |
rs267607523 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915273 | C | T |
rs267607525 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913342 | T | G |
rs267607526 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911252 | C | G |
rs28932768 | 12034796 | 2670 | GFAP | umls:C0270726 | UNIPROT | Juvenile Alexander disease with a novel mutation in glial fibrillary acidic protein gene. | 0.52654694 | 2002 | NA | NA | NA | NA | NA |
rs28932769 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911308 | A | G |
rs56679084 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913382 | C | G |
rs57120761 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915261 | G | C,A |
rs57120761 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44915261 | G | C,A |
rs57590980 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915257 | T | C |
rs57661783 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913421 | C | T,A |
rs57815192 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911251 | T | C,A |
rs58008462 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911267 | A | G |
rs58064122 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44913334 | G | A |
rs58064122 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913334 | G | A |
rs58075601 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911246 | C | T,G |
rs58536923 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911743 | T | C |
rs58645997 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911273 | C | G |
rs58732244 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915258 | T | A |
rs58732244 | 11567214 | 2670 | GFAP | umls:C0270726 | UNIPROT | Infantile Alexander disease: spectrum of GFAP mutations and genotype-phenotype correlation. | 0.52654694 | 2001 | GFAP | 17 | 44915258 | T | A |
rs59285727 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44915251 | C | T,G,A |
rs59285727 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915251 | C | T,G,A |
rs59565950 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44913333 | C | T,G,A |
rs59565950 | 17383133 | 2670 | GFAP | umls:C0270726 | BeFree | R239H mutation of glial fibrillary acidic protein gene was identified, representing a common cause of infantile-type Alexander disease. | 0.52654694 | 2007 | GFAP | 17 | 44913333 | C | T,G,A |
rs59565950 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913333 | C | T,G,A |
rs59568967 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915197 | A | G |
rs59628143 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911242 | T | C |
rs59661476 | 15030911 | 2670 | GFAP | umls:C0270726 | BeFree | A case of infantile Alexander disease with a milder phenotype and a novel GFAP mutation, L90P. | 0.52654694 | 2004 | GFAP | 17 | 44915218 | A | G |
rs59661476 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915218 | A | G |
rs59793293 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915252 | G | T,C,A |
rs59793293 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44915252 | G | T,C,A |
rs59793293 | 18584981 | 2670 | GFAP | umls:C0270726 | BeFree | We report a patient with infantile Alexander disease (AXD) due to the recurrent p.Arg79Cys GFAP mutation. | 0.52654694 | 2009 | GFAP | 17 | 44915252 | G | T,C,A |
rs59985777 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911371 | A | G |
rs60095124 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915300 | T | G |
rs60269890 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913345 | A | G |
rs60343255 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915279 | G | A |
rs60449251 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915227 | A | C |
rs60551555 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913325 | A | C |
rs60551555 | 24003221 | 2670 | GFAP | umls:C0270726 | BeFree | Because K8 Tyr-267 is conserved in many IFs (QYE motif), we tested the effect of the paralogous Tyr in glial fibrillary acidic protein (GFAP), which is mutated in Alexander disease (Y242D). | 0.52654694 | 2013 | GFAP | 17 | 44913325 | A | C |
rs60551555 | 24003221 | 3856 | KRT8 | umls:C0270726 | BeFree | Because K8 Tyr-267 is conserved in many IFs (QYE motif), we tested the effect of the paralogous Tyr in glial fibrillary acidic protein (GFAP), which is mutated in Alexander disease (Y242D). | 0.000271442 | 2013 | GFAP | 17 | 44913325 | A | C |
rs60825166 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911288 | G | C |
rs61060395 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915269 | A | T,C |
rs61497286 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913318 | G | A |
rs61622935 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915225 | G | T,A |
rs61622935 | 23364391 | 2670 | GFAP | umls:C0270726 | UNIPROT | Follow-up study of 22 Chinese children with Alexander disease and analysis of parental origin of de novo GFAP mutations. | 0.52654694 | 2013 | GFAP | 17 | 44915225 | G | T,A |
rs61726468 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913276 | C | T,G |
rs61726468 | 11138011 | 2670 | GFAP | umls:C0270726 | UNIPROT | Mutations in GFAP, encoding glial fibrillary acidic protein, are associated with Alexander disease. | 0.52654694 | 2001 | GFAP | 17 | 44913276 | C | T,G |
rs61726470 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913291 | G | C |
rs61726471 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44910629 | T | A |
rs62635764 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44908143 | C | A |
rs62636501 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911284 | T | A |
rs748860341 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44910143 | C | G,T |
rs763868966 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911429 | C | A,T |
rs797044569 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915290 | C | T |
rs797044570 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915282 | C | T |
rs797044571 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915255 | C | T |
rs797044572 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915248 | A | G |
rs797044573 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915231 | T | C |
rs797044574 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915209 | T | G |
rs797044575 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915113 | - | GCCGCAGCT |
rs797044576 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44915106 | - | AGCCGC |
rs797044577 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913357 | A | T |
rs797044578 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44913277 | G | A |
rs797044579 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911787 | A | G |
rs797044580 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | NA | NA | NA | NA | NA |
rs797044581 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911779 | C | G |
rs797044582 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911775 | G | T |
rs797044583 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911710 | G | C |
rs797044584 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911315 | - | CAAGTG |
rs797044585 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911312 | C | G |
rs797044586 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911290 | G | A |
rs797044587 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911289 | G | C |
rs797044588 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911278 | T | C |
rs797044589 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44911245 | T | G |
rs797044590 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44910632 | G | C,A |
rs797044591 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44908072 | C | - |
rs797044592 | NA | 2670 | GFAP | umls:C0270726 | CLINVAR | NA | 0.52654694 | NA | GFAP | 17 | 44910133 | CAGCTAAC | GAT |
GWASdb Annotation(Total Genotypes:0) | |
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(Waiting for update.) |
GWASdb Snp Trait(Total Genotypes:0) | |
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(Waiting for update.) |
Mapped by lexical matching(Total Items:0) |
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(Waiting for update.) |
Mapped by homologous gene(Total Items:1) | ||||
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HP ID | HP Name | MP ID | MP Name | Annotation |
HP:0002516 | Increased intracranial pressure | MP:0013310 | abnormal adrenal gland development;HP:0002650 | Scoliosis |
Chemical(Total Drugs:1) | |||||||||
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CUI | ChemicalName | ChemicalID | CasRN | DiseaseName | DiseaseID | DirectEvidence | PubMedIDs | ||
C0270726 | vigabatrin | D020888 | 60643-86-9 | alexander disease | MESH:D038261 | therapeutic | 10802771 |
FDA approved drug and dosage information(Total Drugs:2) | ||||||||
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DiseaseID | Drug_name | active_ingredients | strength | Dosage Form/Route | Marketing Status | TE code | RLD | RS |
MESH:D038261 | sabril | vigabatrin | 500MG | TABLET;ORAL | Prescription | None | Yes | Yes |
MESH:D038261 | sabril | vigabatrin | 500MG/PACKET | FOR SOLUTION;ORAL | Prescription | AA | Yes | Yes |
FDA labeling changes(Total Drugs:2) | |||||||||||||
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DiseaseID | Pediatric_Labeling_Date | Trade_Name | Generic_Name_or_Proper_Name | Indications Studied | Label Changes Summary | Product Labeling | BPCA(B) | PREA(P) | BPCA(B) and PREA(P) | Pediatric Rule (R) | Sponsor | Pediatric Exclusivity Granted Date | NNPS |
MESH:D038261 | 10/26/2013 | sabril | vigabatrin | Refractory complex partial seizures (rCPS) | Approved as adjunctive therapy for pediatric patients 10 years and older with rCPS for whom the potential benefits outweigh the risk of vision loss. Sabril is not a first line agent for rCPS Safety and effectiveness for pediatric patients less than 10 years with refractory rCPS have not been established Pooled data from 3 controlled trials in pediatric patients demonstrated that 6% (10/165) of Sabril patients experienced somnolence compared to 5% (5/104) of placebo patients. In those same studies, 10% (17/165) of Sabril patients experienced fatigue compared to 7% (7/104) of placebo patients; 47% (77/163) of Sabril patients versus 19% (19/102) of placebo patients gained greater than or equal to 7% of baseline body weight Adverse reactions (ARs) in the pediatric population were similar to those reported in adults. Overall, ARs in pediatric patients 10-16 years included increased weight, upper respiratory tract infection, tremor, fatigue, aggression and diplopia Information on weight based dosing, dosing in renal impairment, safety information and clinical trials | Labeling | - | - | B,P | - | Lundbeck LLC | 3/10/2013 | FALSE' |
MESH:D038261 | 10/26/2013 | sabril | vigabatrin | Refractory complex partial seizures (rCPS) | Approved as adjunctive therapy for pediatric patients 10 years and older with rCPS for whom the potential benefits outweigh the risk of vision loss. Sabril is not a first line agent for rCPS Safety and effectiveness for pediatric patients less than 10 years with refractory rCPS have not been established Pooled data from 3 controlled trials in pediatric patients demonstrated that 6% (10/165) of Sabril patients experienced somnolence compared to 5% (5/104) of placebo patients. In those same studies, 10% (17/165) of Sabril patients experienced fatigue compared to 7% (7/104) of placebo patients; 47% (77/163) of Sabril patients versus 19% (19/102) of placebo patients gained greater than or equal to 7% of baseline body weight Adverse reactions (ARs) in the pediatric population were similar to those reported in adults. Overall, ARs in pediatric patients 10-16 years included increased weight, upper respiratory tract infection, tremor, fatigue, aggression and diplopia Information on weight based dosing, dosing in renal impairment, safety information and clinical trials | Labeling | - | - | B,P | - | Lundbeck LLC | 3/10/2013 | FALSE' |